prot_E_fasciculatus_S2_contig9979.17961.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9979.17961.1
Unique Nameprot_E_fasciculatus_S2_contig9979.17961.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length105
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9979.17961.1 vs. uniprot
Match: A0A6H5JEA6_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA6_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 3.610e-30
Identity = 71/82 (86.59%), Postives = 75/82 (91.46%), Query Frame = 0 
Query:    7 RNLTSLDRETKAFKSVMEEKARMTIPVRTTTSFLPAERTARDGNVTRLSTPLAEAGKRSSSGNASSRRGGRRKAQAPLRVVV 88
            R LTSLDRETKAFKS++EEKARMT+PVRTTTSFLPAERTAR+G VTRLSTPLAEAG   SSG  SSRRGGRRKAQAPLRVVV
Sbjct:  922 RYLTSLDRETKAFKSLIEEKARMTVPVRTTTSFLPAERTAREGKVTRLSTPLAEAGNGGSSG--SSRRGGRRKAQAPLRVVV 1001
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BLAST of mRNA_E_fasciculatus_S2_contig9979.17961.1 vs. uniprot
Match: D7FH45_ECTSI (ERCC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH45_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 6.700e-30
Identity = 71/82 (86.59%), Postives = 76/82 (92.68%), Query Frame = 0 
Query:    7 RNLTSLDRETKAFKSVMEEKARMTIPVRTTTSFLPAERTARDGNVTRLSTPLAEAGKRSSSGNASSRRGGRRKAQAPLRVVV 88
            R LTSLDRETKAFKS++EEKARMT+PVRTTTSFLPAERTAR+G VTRLSTPLAEAGK SSSG  SSR+GGRRKAQA LRVVV
Sbjct:  831 RYLTSLDRETKAFKSLIEEKARMTVPVRTTTSFLPAERTAREGKVTRLSTPLAEAGKGSSSG--SSRKGGRRKAQASLRVVV 910
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9979.17961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JEA6_9PHAE3.610e-3086.59ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FH45_ECTSI6.700e-3086.59ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9979contigE_fasciculatus_S2_contig9979:347..2110 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9979.17961.1mRNA_E_fasciculatus_S2_contig9979.17961.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9979 279..2113 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9979.17961.1 ID=prot_E_fasciculatus_S2_contig9979.17961.1|Name=mRNA_E_fasciculatus_S2_contig9979.17961.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=105bp
MFWTCCRNLTSLDRETKAFKSVMEEKARMTIPVRTTTSFLPAERTARDGN
VTRLSTPLAEAGKRSSSGNASSRRGGRRKAQAPLRVVVTFVSSAACFLTC
CQQV*
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