mRNA_E_fasciculatus_S2_contig9830.17841.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9830.17841.1
Unique NamemRNA_E_fasciculatus_S2_contig9830.17841.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9830.17841.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3L5_ECTSI)

HSP 1 Score: 662 bits (1709), Expect = 3.650e-219
Identity = 412/457 (90.15%), Postives = 417/457 (91.25%), Query Frame = 1
Query:    1 QESRKPRNAASGGARVSQMSSTVTVSKAFRGQLQNLMATLRATEPHYIKCIKPNNVKAPGGFSAHLVHQQLNYSGVLEVVRIRREAYPGRTPFLEFFERFELLQRQLTRASVGXXXXXXXXXXLPSAAHATEEEAKEGCRTILEAFLPDKFYQIGHTRVFLKEEGQDMLRSCMRNVYHRKAALIQACVRAMQGSMKLKEKKAAAIVIHAAARRFVLRNRYKSVLSKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFAGLMLMELWMEEEENKRKAEEFRMRRRVLAAAIIRSWVRRMVQKYGVKAQRXXXXXXXXXXXXXARNRWLEERVGRVFAIARSGDVDGMMRELRHNPDVLFMRDRHDRFKTLLHLAATSGSTSLLSLLDPLPEDVLVLDSDGCTPLHHAAASSKYDVVKFLASRANGRV 1371
            QESRKPRNAASGGARVSQMSSTVTVSKAFRGQLQNLMATLRATEPHYIKCIKPNNVKAPGGFSAHLVHQQLNYSGVLEVVRIRREAYPGRTPFLEFFERFELLQRQLTRASV           LPSAAHATEEEAKEGCRTILEAFLP+K YQIGHTRVFLKE+GQDMLRSCMRNVYHRKAALIQACVRAMQGSMKLKEKKAAAIVIHAAARRFVLR RY+SVLSKVL          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR+AGLMLMELWMEEEENKRKAEEFR+RR   AAAIIRSWVRRMVQKYGVKAQR             ARN WLEERVGRVFAIARSGDVDGMMRELRHNPDVLFMRDRHDRFKTLLHLAATSGSTSLLSLLDPLPEDVLVLDSDGCTPLHHAAASSKYDVVKFLASRANGRV
Sbjct:  921 QESRKPRNAASGGARVSQMSSTVTVSKAFRGQLQNLMATLRATEPHYIKCIKPNNVKAPGGFSAHLVHQQLNYSGVLEVVRIRREAYPGRTPFLEFFERFELLQRQLTRASVDGGGEGGGPS-LPSAAHATEEEAKEGCRTILEAFLPEKLYQIGHTRVFLKEKGQDMLRSCMRNVYHRKAALIQACVRAMQGSMKLKEKKAAAIVIHAAARRFVLRKRYRSVLSKVLLLQRWYRSRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYAGLMLMELWMEEEENKRKAEEFRIRR---AAAIIRSWVRRMVQKYGVKAQRVAAARIQRAWLRRARNLWLEERVGRVFAIARSGDVDGMMRELRHNPDVLFMRDRHDRFKTLLHLAATSGSTSLLSLLDPLPEDVLVLDSDGCTPLHHAAASSKYDVVKFLASRANGRV 1373          
BLAST of mRNA_E_fasciculatus_S2_contig9830.17841.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL8_9STRA)

HSP 1 Score: 243 bits (620), Expect = 5.620e-67
Identity = 251/475 (52.84%), Postives = 307/475 (64.63%), Query Frame = 1
Query:   19 RNAASGGARVSQMSSTVTVSKAFRGQLQNLMATLRATEPHYIKCIKPNNVKAPGGFSAHLVHQQLNYSGVLEVVRIRREAYPGRTPFLEFFERFELLQRQLTRASVGXXXXXXXXXX----LPSAAHATEEEAKEGCRTILEAFLPD-KFYQIGHTRVFLKEEGQDMLRSCMRNVYHRKAALIQACVRAMQGSMKLKEKKAAAIVIHAAARRFVLRNRYKSVLSKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFAGLMLMELWMEEEENKRKAEEFRMRRRVLAAAIIRSWVRRMVQKYGVKAQRXXXXXXXXXXXXXARNRWLEERVGRVFAIARSGDVDGMMRELRHNPDVLFMRDRHDRFK-------------------TLLHLAATSGSTSLLSLLDPLPEDVLVLDSDGCTPLHHAAASSKYDVVKFLASRANGRV 1371
            R  ASG  RV  +++T TVS+ FRGQL +LM TLR TEPHYIKCIKPN VKAPGGFS HLV +QLNYSGVLEVVRIRREAYP R  F EF++RFELL  +  R +  XXXXXXXX      LP+A  A++ EAK   R +L   + + +++Q+GHT++FLKEEG + LR  +R  Y+  A ++ A VR       +  ++ AAI I    R    RNR++  + KV   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +            R ++E+R      AA II+   R+  ++       XXXXXXXXXXXXX         V   F  A+ G V+ +   ++  P+ L +R R +RFK                   TLLH AA  GSTSL+SLLDPLPEDVL+ D+DG TPLHHA AS+KYD+VKFLA+RAN +V
Sbjct:  601 RRTASG--RVHLLATTSTVSRTFRGQLLSLMHTLRNTEPHYIKCIKPNTVKAPGGFSPHLVREQLNYSGVLEVVRIRREAYPVRVSFAEFYDRFELLHARAARVAAXXXXXXXXXPPEWAVLPAAGVASDAEAKVAARAVLTRVMGNAEYFQVGHTQIFLKEEGLEALRRAVRLEYNHYACVVTALVRRRATQKLVARRRTAAITIQKVVRMAQARNRFQKTVRKVQILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL------------RASKEYR------AAEIIQCAWRKSRRERMRXXXXXXXXXXXXXXXXXXXXXXXXXXVDSAFRSAKEGHVNAVAAIIKQFPERLCLRHRRNRFKWQRAXXXXXXXXXXXXXXKTLLHAAAQGGSTSLVSLLDPLPEDVLLRDADGNTPLHHACASAKYDLVKFLAARANTQV 1055          
BLAST of mRNA_E_fasciculatus_S2_contig9830.17841.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6I1_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 1.950e-36
Identity = 173/499 (34.67%), Postives = 239/499 (47.90%), Query Frame = 1
Query:   70 TVSKAFRGQLQNLMATLRATEPHYIKCIKPNNVKAPGGFSAHLVHQQLNYSGVLEVVRIRREAYPGRTPFLEFFERFELLQRQLTRASVGXXXXXXXXXXLPSAAHATEEEAKEGCRTILEAFLPDK----FYQIGHTRVFLKEEGQDMLRSCMRNVYHRKAALIQACVRAMQGSMKLKEKKAAA----------------------------IVIHAAARRFVLRNRYKSVLSKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-------FAGLMLMELWMEEEEN----KRKAEEFRMRRRVLAAAIIRSWVRRMVQKYGVKAQRXXXXXXXXXXXXXARNRWLEERVGRVFAIARSGDVDGMMRELRHNPDVLFMRDRHD-----------------RFKTLLHLAATSGSTSLLSLLDPLPEDVLVLDSDGCTPLHHAAASSKYDVVKFLASRANGRVSRSMR 1386
            TVS AFR QL +L+A LR TEPHYIKCIKPN+ KAPGG+++ LV +QL YSGVLEVVRIRREA+P R  + +F+ RF  L                    +P+A   T  +A+E    + +A   +K     +Q+G T+VFL+++G   LR+ +R  Y   A+ IQA  R      K+  ++ AA                                      V R +   V  +                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           +        A   +  +W  + E     +R+A+E + + RV A  +   +++   +    +AQR              RNR L +   +VF  ARSGDV  + R L   P +LF+RDRHD                  + TLLH A   G+  +++LL+P   ++   D  G T +H AAA   YD++KFLA RAN  V +++R
Sbjct:  927 TVSNAFRSQLDDLVAQLRETEPHYIKCIKPNSDKAPGGWTSSLVIEQLRYSGVLEVVRIRREAFPMRVTYKQFYRRFGTL---------------LVSKDMPTADDVTSAKAREVGLGVCKAVFGEKEAGSSFQMGKTKVFLRDDGLKRLRAALRLHYFTIASKIQALWRGSLARAKIARQREAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVARQQVSVVKMQATWRGWRQREWRKREANATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAARKEVAILRKRKRVREETASTRIAAVWRGKSERLYGARRRAKERQAQTRVWA--LREEYLQE--EAMACRAQRSLRAFL--------RNRRLRDASIQVFQAARSGDVPTVARHLSEWPALLFLRDRHDGDAHAGMAEGGAEKRVPSYSTLLHAACQGGAIEVVALLEPFLSEITDKDRWGNTAVHVAAAECNYDLLKFLAHRANLEVRKAVR 1398          
BLAST of mRNA_E_fasciculatus_S2_contig9830.17841.1 vs.
Match: Myosin-like (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRG2_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.730e-34
Identity = 87/202 (43.07%), Postives = 119/202 (58.91%), Query Frame = 1
Query:   55 MSSTVTVSKAFRGQLQNLMATLRATEPHYIKCIKPNNVKAPGGFSAHLVHQQLNYSGVLEVVRIRREAYPGRTPFLEFFERFELLQRQLTRASVGXXXXXXXXXXLPSAAHATEEEAKEGCRTILEAFLPDKFYQIGHTRVFLKEEGQDMLRSCMRNVYHRKAALIQACVRAMQGSMKLKEKKAAAIVIHAAARRFVLRNRY 660
            +S   TVS  FR QL+ L ATL+ATEPHYIKCIKPN +KA GGFS  LV QQL YSGVLEVVRIRREAYP R PF +F+ RF++L       +            L S+A     E +  C+ I+   LP   +Q+G  ++FL++ G D+LR  +R+ +   AA IQA +R   G  +    + A +++    R  +LR ++
Sbjct:  763 ISGAFTVSCTFRRQLEELTATLKATEPHYIKCIKPNAIKAAGGFSPRLVVQQLRYSGVLEVVRIRREAYPTRIPFEDFYRRFDVLLGSCKPPT------------LRSSA-----EYRAACQAIVAKVLPVGGFQLGKRKIFLRDNGLDLLRDAIRDFFASHAARIQALIRGFLGVRRYIHTRKALLLLQRTVRMHLLRKKF 947          
BLAST of mRNA_E_fasciculatus_S2_contig9830.17841.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ73_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.860e-31
Identity = 87/203 (42.86%), Postives = 113/203 (55.67%), Query Frame = 1
Query:   46 VSQMSSTVTVSKAFRGQLQNLMATLRATEPHYIKCIKPNNVKAPGGFSAHLVHQQLNYSGVLEVVRIRREAYPGRTPFLEFFERFELLQRQLTRASVGXXXXXXXXXXLPSAAHATEEEAKEGCRTILEAFLPDKF-YQIGHTRVFLKEEGQDMLRSCMRNVYHRKAALIQACVRAMQGSMKLKEKKAAAIVIHAAARRFVLR 651
            V +++S  TVS+ FR QL++L+  L ATEPHYIKCIKPNN+KAP G+S+ LV QQL YSGVLEVVRIRREA+P R  F+EF+ RF  L     R                    A  + A+  C  I    L     YQ+G  +VFLK++G D LR  ++  Y   A  IQ   R       L+++  AAI +   AR F+ R
Sbjct:  759 VDKLASASTVSQTFRKQLESLVEQLSATEPHYIKCIKPNNMKAPSGWSSQLVIQQLRYSGVLEVVRIRREAFPTRITFVEFYRRFGQLINWRARGLAPPETIGADAARAAVLNSALADAARAACAEICAKALESTADYQLGTPKVFLKDDGLDRLRWALQQHYVAGATGIQRVWRGYAARKALQQQDKAAIRVQRIARGFIAR 961          
BLAST of mRNA_E_fasciculatus_S2_contig9830.17841.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3H3_9STRA)

HSP 1 Score: 129 bits (325), Expect = 6.160e-29
Identity = 80/200 (40.00%), Postives = 112/200 (56.00%), Query Frame = 1
Query:   52 QMSSTVTVSKAFRGQLQNLMATLRATEPHYIKCIKPNNVKAPGGFSAHLVHQQLNYSGVLEVVRIRREAYPGRTPFLEFFERFELLQRQLTRASVGXXXXXXXXXXLPSAAHATEEEAKEGCRTILEAFLPDKFYQIGHTRVFLKEEGQDMLRSCMRNVYHRKAALIQACVRAMQGSMKLKEKKAAAIVIHAAARRFVLR 651
            Q++   TVS  FR Q++NL  TL AT+PHYIKCIKPNNVKA   F   LV QQL Y+GVLEVVRIRRE YP R  + +F+ ++E+L     R ++             +A  A+E+ A      +L+A   +K +Q+G T +FL++ G D + + +R  Y   A+ I AC R     M+           + AARR V+R
Sbjct:  258 QLAGNKTVSLKFRQQVKNLCDTLTATQPHYIKCIKPNNVKAATAFGPRLVAQQLRYAGVLEVVRIRREGYPSRMNYFDFYAKYEMLIPYKERQAMKSVADCRAQGDAAAARAASEKIA----HLVLDASDAEKEFQLGGTLLFLRDNGLDKMDAAVREFYAGHASAINACARRFIAVMR-----------YRAARRRVIR 442          
BLAST of mRNA_E_fasciculatus_S2_contig9830.17841.1 vs.
Match: Uncharacterized (protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SQ11_9ARCH)

HSP 1 Score: 127 bits (320), Expect = 1.150e-27
Identity = 77/183 (42.08%), Postives = 101/183 (55.19%), Query Frame = 1
Query:   55 MSSTVTVSKAFRGQLQNLMATLRATEPHYIKCIKPNNVKAPGGFSAHLVHQQLNYSGVLEVVRIRREAYPGRTPFLEFFERFELL-----QRQLTRASVGXXXXXXXXXXLPSAAHATEE----EAKEGCRTILEAFLPDKFYQIGHTRVFLKEEGQDMLRSCMRNVYHRKAALIQACVRAMQ 576
            M+++ ++S  FR QL NLM+TLR T PHYIKCIKPN  K P    + LV QQL YSGVLEVVRIRRE +P R  F EF   + LL      +QL +  +                H  +E    E KE C  IL+  L    YQIGHT++FL+ +G   ++  ++  Y + A +IQA  R  Q
Sbjct:  733 MAASASISNQFRLQLDNLMSTLRNTTPHYIKCIKPNTTKQPQNIDSVLVLQQLRYSGVLEVVRIRREGFPLRLSFAEFLLHYHLLLPNSTYKQLIQEYLQAHPEQEEEEEAKVFKHVVDELSLEECKEYCVHILKFSLNSTQYQIGHTKIFLRHDGIQTMKDAIKRFYAKHAIVIQAYYRRFQ 915          
BLAST of mRNA_E_fasciculatus_S2_contig9830.17841.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0ZTV9_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.520e-26
Identity = 75/170 (44.12%), Postives = 98/170 (57.65%), Query Frame = 1
Query:   55 MSSTVTVSKAFRGQLQNLMATLRATEPHYIKCIKPNNVKAPGGFSAHLVHQQLNYSGVLEVVRIRREAYPGRTPFLEFFERFELLQRQLTRASVGXXXXXXXXXXLPSAAHATEEEAKE--GCRTILEAFLPDKFYQIGHTRVFLKEEGQDMLRSCMRNVYHRKAALIQA 558
            M  +++VS  FR QL+ L  TLR+T+PHYIKC+KPNNVKA G  S HL+ QQL YSGVLEVVRIRREAYP R  F E  + F    + L RAS+            P A     +EA     C+ + E FL    +QIG T++FL+    ++L       +  KA +IQ+
Sbjct:   91 MMGSLSVSMRFREQLETLTQTLRSTQPHYIKCVKPNNVKAAGALSPHLIIQQLRYSGVLEVVRIRREAYPTRMRFSELHKVF----KTLIRASLDIQ---------PPALDQAPDEAVSLAACQRLAERFLEPDHFQIGKTKIFLRHGVMELLTRQQDAFFAGKATVIQS 247          
BLAST of mRNA_E_fasciculatus_S2_contig9830.17841.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6I0_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 3.890e-26
Identity = 73/167 (43.71%), Postives = 94/167 (56.29%), Query Frame = 1
Query:   94 QLQNLMATLRATEPHYIKCIKPNNVKAPGGFSAHLVHQQLNYSGVLEVVRIRREAYPGRTPFLEFFERFELLQRQLTRASVGXXXXXXXXXXLPSAAHATEEEAKEGCRTILEAFLPDKFYQIGHTRVFLKEEGQDMLRSCMRNVYHRKAALIQACVRAMQGSMKLK 594
            QL +L+  L  TEPHYIKCIKPN+ KAPGG+S+ LV  QL YSGVLEVVRIRREAYP R  ++E +  F +L       ++             S    +EEEA+  CR I    L    +Q+G TRVFLK+   D LR  ++  Y   A  IQA  R+     +L+
Sbjct:  830 QLDSLVMQLGQTEPHYIKCIKPNSAKAPGGWSSPLVIDQLRYSGVLEVVRIRREAYPLRLDYVEMYRNFRVLAEWKAGGTL-------------SPETCSEEEARVMCREICSFALEPDDFQLGRTRVFLKDNALDKLRWALQAKYVSAACSIQAAARSFLARNRLR 983          
BLAST of mRNA_E_fasciculatus_S2_contig9830.17841.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7C8_HETAK)

HSP 1 Score: 110 bits (275), Expect = 1.650e-25
Identity = 54/96 (56.25%), Postives = 72/96 (75.00%), Query Frame = 1
Query:   52 QMSSTVTVSKAFRGQLQNLMATLRATEPHYIKCIKPNNVKAPGGFSAHLVHQQLNYSGVLEVVRIRREAYPGRTPFLEFFERFELLQRQLTRASVG 339
            Q++S ++VS  FR QL +L+A L  TE HY+KC++PNNVKAP GF++HL+ +QL YSGVLE++RIRREA+P R P+ EF  RF+ L   L RA  G
Sbjct:   19 QIASQLSVSYLFRSQLSDLVAQLARTETHYVKCLRPNNVKAPDGFNSHLILEQLRYSGVLELIRIRREAFPVRVPYAEFLRRFQALS--LIRAEPG 112          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9830.17841.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized3.650e-21990.15protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3L5... [more]
P-loop5.620e-6752.84containing nucleoside triphosphate hydrolase prote... [more]
Uncharacterized1.950e-3634.67protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6I1... [more]
Myosin-like1.730e-3443.07protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
P-loop2.860e-3142.86containing nucleoside triphosphate hydrolase prote... [more]
Hypothetical6.160e-2940.00protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=... [more]
Uncharacterized1.150e-2742.08protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A48... [more]
Hypothetical2.520e-2644.12protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Uncharacterized3.890e-2643.71protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Hypothetical1.650e-2556.25protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9830contigE_fasciculatus_S2_contig9830:181..5520 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score671.8
Seed ortholog evalue2.3e-190
Seed eggNOG ortholog2880.D7G3L5
Model size1389
KEGG koko:K10352,ko:K10357
KEGG Pathwayko04530,map04530
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5022@1,KOG0160@2759
Cds size1389
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03029,ko04131,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9830.17841.1prot_E_fasciculatus_S2_contig9830.17841.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9830 181..5520 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842627.1328473-CDS-E_fasciculatus_S2_contig9830:180..3681696842627.1328473-CDS-E_fasciculatus_S2_contig9830:180..368Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9830 181..368 +
1696842627.1452198-CDS-E_fasciculatus_S2_contig9830:939..10061696842627.1452198-CDS-E_fasciculatus_S2_contig9830:939..1006Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9830 940..1006 +
1696842627.1568017-CDS-E_fasciculatus_S2_contig9830:2451..26701696842627.1568017-CDS-E_fasciculatus_S2_contig9830:2451..2670Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9830 2452..2670 +
1696842627.1691766-CDS-E_fasciculatus_S2_contig9830:3262..34661696842627.1691766-CDS-E_fasciculatus_S2_contig9830:3262..3466Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9830 3263..3466 +
1696842627.1812475-CDS-E_fasciculatus_S2_contig9830:3894..40491696842627.1812475-CDS-E_fasciculatus_S2_contig9830:3894..4049Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9830 3895..4049 +
1696842627.192934-CDS-E_fasciculatus_S2_contig9830:4258..43751696842627.192934-CDS-E_fasciculatus_S2_contig9830:4258..4375Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9830 4259..4375 +
1696842627.2040026-CDS-E_fasciculatus_S2_contig9830:4767..49951696842627.2040026-CDS-E_fasciculatus_S2_contig9830:4767..4995Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9830 4768..4995 +
1696842627.2170506-CDS-E_fasciculatus_S2_contig9830:5309..55201696842627.2170506-CDS-E_fasciculatus_S2_contig9830:5309..5520Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9830 5310..5520 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9830.17841.1

>prot_E_fasciculatus_S2_contig9830.17841.1 ID=prot_E_fasciculatus_S2_contig9830.17841.1|Name=mRNA_E_fasciculatus_S2_contig9830.17841.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=463bp
QESRKPRNAASGGARVSQMSSTVTVSKAFRGQLQNLMATLRATEPHYIKC
IKPNNVKAPGGFSAHLVHQQLNYSGVLEVVRIRREAYPGRTPFLEFFERF
ELLQRQLTRASVGGGGGEGGGSSLPSAAHATEEEAKEGCRTILEAFLPDK
FYQIGHTRVFLKEEGQDMLRSCMRNVYHRKAALIQACVRAMQGSMKLKEK
KAAAIVIHAAARRFVLRNRYKSVLSKVLVVQRWYRSRMIRHKYKGCIASA
VLIQKRVRGMQAREYRLLQEVAAITIQRHARGMEGRRFAGLMLMELWMEE
EENKRKAEEFRMRRRVLAAAIIRSWVRRMVQKYGVKAQRVAAARIQRAWL
RRARNRWLEERVGRVFAIARSGDVDGMMRELRHNPDVLFMRDRHDRFKTL
LHLAATSGSTSLLSLLDPLPEDVLVLDSDGCTPLHHAAASSKYDVVKFLA
SRANGRVSRSMR*
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mRNA from alignment at E_fasciculatus_S2_contig9830:181..5520+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9830.17841.1 ID=mRNA_E_fasciculatus_S2_contig9830.17841.1|Name=mRNA_E_fasciculatus_S2_contig9830.17841.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5340bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9830:181..5520+ (Ectocarpus fasciculatus EfasUO2)
CAGGAGAGTCGCAAGCCGCGCAACGCCGCTTCCGGCGGGGCGAGGGTGTC CCAGATGTCGTCGACCGTGACCGTGTCCAAGGCTTTCCGGGGGCAGCTGC AGAACCTCATGGCCACCCTGCGCGCCACCGAGCCGCACTACATCAAGTGC ATCAAGCCCAACAACGTGAAGGCTCCAGGAGGTTTCAGGTGCGTGCTGCC TTTTTTTGTTGGTGGTTGTATACAGAACGCGCCACCATTTTGGAACTTGT TACCTTGGCGGTGGCTGGGGTTGGTAGTTCGTAGAGGATATGCTTAGAAT ATTCGCTATATTTGTGTTACGCCTATTATCCGAGCTCACAAGTGGTGCTC AATTTCTTAAGAGTTTTTTTTTTTTTTTTCAGGCTCAATTTCTTAACTCC TGGGTTTTGAGTGGTGGCGCGTTCTACATGTACAGTGCGGTGATGTTTGT TTTTTTCTTTTTTGCGGGGTGGAAGGCCTTGCAAAGGAATCGGAAGGGAT TGTTTTTGAGTTAAAGGAGCTGGTCAGGAGCAGCGTGGGAGGCGTACTGC AGCGGCTGGTAGCGTAGTTGTTCGTTTTGACTGTCAGTGTATTGTTAGCT GACGGTATGCGCAGCCTTGTCTGCCCGATCGAGACGGCTCGCACTCGAGA CGCCCCAACCACGCTAATTTGGCCGTTTGTTCTGTTTCTGCTGCTGGTGC GGTTGCTGCTGTTGGTGGTGGTGTGAATTGCTGCGCCCCTGGTGATGGTG GCTGTACAGCGCGCACTTGGTGCATCAGCAGCTGAACTACTCGGGAGTCC TGGAGGTGGTCCGCATCCGCAGGGAGGTAGGTCCGCCCGTATGCGTGGTG CACGAATTCTTCAAGCACCGGCGGTTCATCGTCTTCGGCCGGCCGCGGTA CCACCTGCTTCGTGTGCGTCGCCTCCGGAATGCATCCATCAACACGAACA GCAGCAATGCAAACAGTTGTTCGTGTTGATGCAGTCCGGAGACGACGCAC ACGAAGAAGATGGGTGTTTTTTTTTTTTGTTTGCTGCTGTCGATCTGTGG CTTGCTTCCGTGCAAAAAGCGGCTGCTTGCCTGGTCCGTCTCCGCCAAGG GCGGCTGGAACAATCCTAACCGCAGTCTCAACACTGCTTTTTCGATACCG TCATGCGAGTCTCGGAAGGCATCCGCAAAGAGCTTCGTCGTTGGCGCTTG GACGAACAATCCAATATGACCCCCGAGTAACCCCGTGCCGTCCCGGGCCA ACTAGACCTACAATACCATGTACAGAGAAGTGCGTGACAAGATACCGCAC CACGCGGACTGCCGCAGTATTAGCTTCTTCTTGCCATGGCATGATTGTCA AAAACCCCGTGGGGACGGCGGGCAGCTTCGCGTGTTCGCCGCGTGGCGGT ATTGCCGGCTTAGGCTGTGGCTGTGTCGCTCGGTCCCGCGAGGGCTCGGT CCTCGCGAAGGTGTCGTACGGCAGGGTCCTAGCAGATGTCTGGCGGTGAT CGTGGGAGGCACCGTCGCGCAAGGCGTTCATGATGCCGCCGCTACCACAG CTGTCGGCCATGCTACAAGAGCCACCGGGCGCGATGGACGTTCTCGCCCG GTGGCTCTTATATCACGGCCAGCAGCTGTGGTGGCGCCGGCAACAGCACA GGCGTCGTTTATGCGTTTCGCGGCGGTGCCGGCCACGTTCGCCGTGCCAG GGATCTACTAGCAACCCGCCGTGCTACATACCCGTCGCGAGGACGGAGGG AGCGACACAGCCGCAGCCTGAGCCGGCATAACAGCACCCCACCCACCGAA AACGCGACAGCACGCCCGCTCTTGTCTGTCTCGCCCCGACAGGACGAGGC ACAGATTGGTTCATGTTTGTTAAACGTAGCCTGGGCCGGCGGAAGACCCG GGACATCGGTCCGTGCCGATATTGTTTGCATAGGGATGCGAGGTCAATGG TCTAACGGCTACGGCATGCTCGTACATGAGGACGCAGGGGTCGCAACAAC CCAGGAGACACCCTTGCATACACACAAAGCGACGCCGGACGCGGCTACCT ACTTGCGACGACCCACAATGTTGTCTTCACGAACTCCGCCGACAGGAGCA TCCCTAGTCGATTTTGGTGCTCCTTTGTTTTATCTCTACGAGCTCCTTTG GCAAGCGTACCCCGAGCCGATATGGTGCTCAACTAGATTTATTGCTACAA ACTGCTCTGGCAGGTGTTCCCCGACCAATTATTGAGCTAACTTTTTTTTT CTCCACGGATTCCTCCAACAGGCGTACCCCGGGCGCACGCCGTTCCTGGA GTTCTTCGAGAGGTTCGAGCTGTTGCAGCGGCAGCTGACGAGGGCTTCTG TCGGGGGTGGAGGGGGGGAAGGGGGGGGCTCTTCCCTGCCTTCGGCCGCC CACGCCACCGAGGAGGAGGCTAAGGAGGGTTGCCGCACCATCCTGGAGGC CTTCTTGCCCGACAAGTTCTACCAGATCGGGCACACGCGGGTGAGCTAGG GAGCGGACCTTAGGAGCAAACTACCTTCTGTTGTTGTTGTCGTGTTTTGG TATGTGGGAGAGTATGGTAAACGGTAGAAGACGAGCGCTGCCCTTGGAGG AACTGCCTCCCCATGTTGTTTGCGGTACGCATTGCGGTGGGAGACGTGGA CCTTTTGAACAACATGCCTTCTGTTTTTTTTTCTGGGAGCGGTCAGTAGC AAAAGCAACACATCACCAGCTGGGGAGAGAAGAAAAACGGCCCAAACGTT AAAGAGGAAGTTGCTGGATCGTATAGGCGTACCATGCCGAGAGGCAATAC ACACACGACCAGCAAAGGATCGACTTCACCTATCGCTAGCCCATATCCAA AGAAGGGAAACATTGTCAGATGCATATCGTGGTTGTTCCCTACCCTGTAC ACATGAACTGAAGTCCACAACCAGCGCGCAAAACTTGTGCTATTCTTCTC CACACTCACTCCGTTGTGAGTTATGCACGGCAATCCCACTCTTAGATTGA GCCGCCAACTATTCTCTCCGCACTACTCACATTGTTATCGGTTTGAACCT GACGTGGGCAACGACTCTCCTGTATGCATCAGGTTTTCCTGAAGGAGGAG GGGCAGGACATGCTCCGCTCGTGCATGCGGAACGTCTACCACCGCAAGGC CGCCCTCATCCAGGCCTGCGTCCGCGCGATGCAGGGCTCGATGAAGCTCA AGGAGAAGAAGGCCGCCGCCATCGTTATCCACGCCGCCGCTCGCCGTTTC GTGCTCAGGAACCGCTACAAGAGCGTGCTGTCAAAGGTGTGCTCGGGGGG AGGGGGGCAGAGGGCCAGTTTCTTGCTTGCCTGCGGAAAAAGGAGAAGGT TCTAATTGGGGAGGGAGGTTTTATTTACTTGACGGAACTAGGCTGTGGCT GTGTATGGTTTTGGGAGTCTGGAGACCTGAGCTGTGGTTGGGAGTTGTAG GGTGTTGCTGTGTATGGTTCTGAGAGCCGGGCGACGTCTTAGCGCGGGAG TTGCGGTTGAGGGCAGGTGATCTAAGGCTCTGTTTGTCGATCCGTTGCCT CGATGACGTCACTCGGGCTTGCACTCACTGGCGTTTGGCTACATATGCGC TTGATTTTTGTGGTGGTTGCCCCGGCGCAGATGTTGCTGCTGGAGCCATT GCTACTGTCTTGTCTCGAACTCACTGACTTTTCTATTTTTTGCTCGCTTG ACGCCCCGCTGCAGGTGTTGGTGGTGCAGCGCTGGTACCGGAGCCGGATG ATCCGACACAAGTACAAGGGCTGCATCGCCTCGGCCGTTCTTATCCAGAA GCGGGTCCGCGGCATGCAGGCCCGGGAGTACCGCCTGCTCCAAGAGGTTG CCGCCATCACCATACAGAGGTGTGTGTAACCGTCGGTGTAGGAGGGGGGA GGGGAGAGAAGAAAGTGGGTGCAATGTCCGTTGCGTTGTGCTGTCGCTTA CATTTTTTTCTTCAACGGTCGGAGGGGCTCGTACAAAGCCGAGAGAGCAT TGTCGACCCTCATTTCCATTTGGTTTATCGCGACCAATCTCCCGTCTTCC TCCCGATGCCTTTCGATCGGCCACACAGGCACGCCCGCGGCATGGAAGGG AGGAGGTTTGCCGGCCTGATGCTCATGGAGCTGTGGATGGAGGAGGAAGA GAACAAGAGGAAGGCCGAGGAGTTCAGGATGAGGAGGCGAGTTTTGTCAT GTCGTTGGGGAGGGAGCGTGATGAATGAGCGTAGGCGTAACTCGAAGTGT GCATATTCCGCCCCCAAGTCGATTGAGTTATGGCTTCAGAGCGGCATTAT TGAGCAACGCCAGCACCTAGCGTCACACACTTGCGGCGTCCAAGAAAGAT TTGTCTGGTGCCGTAAGTGCAAGTTCCAAATAGGCTTCTTCGGTATGCCT CCCTTCTCCCCTTTCTACTCCGGTGCTGTTTAGTCGAACTCACCCCGCCC TCCTTCCTCACATCAGCACCCCCTACACTAACCACCCTTCTCTCTGCTAC CCCCCCCGCCGCCGCCGCCCACCACCACCTCTCTCACTCTCTTACTCGTC CTGCCTCTTTTGGTTGTCTTTTCGTCCCCGTACCCAGGGCGGCGGCCATC ATCCGCTCCTGGGTGCGGCGGATGGTGCAGAAGTACGGCGTTAAGGCGCA ACGGGTGGCGGCCGCCCGGATCCAGCGGGCTTGGCTGCGCCGCGCTCGCA ACCGCTGGCTGGAGGAGAGGGTGGGGCGCGTGTTCGCCATCGCTCGGTCT GGAGACGTGGACGGGATGATGCGCGAGCTGAGGCACAACCCGGACGTGCT GTTCATGCGCGACAGGTGAGGACGGGCGGGCGGGAGGGTGGGTGGCGGGA AGGGAGAAAAAGGGCGTAGATTGGGAAGGCGTCTACCACAAGGTTCTGTG TTTGCTGTTGTCTTGTATGTCACGCCCATGTACAGCCACTGCCCACAAAA ACATTGACCGCGCATCCCACCTTCAGACCTTCACTGCGTTCCGCTTCCCA CCCCGTGTGTAATCGGGTGTTACGCCCACACACACACACACACCTTTTAT TCTACGCCCCTCCGCCGTCTTTGCCCTACCCACATATATATTTTTTCTGC ACCCCATAATTTTGTCACCCCCCCCGCAGGCACGACCGTTTCAAGACGCT GCTGCACCTCGCCGCGACCAGCGGCAGCACCTCCCTCCTGTCTCTGCTTG ACCCCCTCCCCGAAGACGTCCTGGTCCTCGACAGCGACGGCTGCACCCCG TTGCACCACGCCGCCGCGTCTAGCAAGTACGACGTCGTCAAGTTCCTCGC GTCCAGAGCCAACGGGAGGGTGAGTCGCAGCATGAGATAA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9830:181..5520+

>mRNA_E_fasciculatus_S2_contig9830.17841.1 ID=mRNA_E_fasciculatus_S2_contig9830.17841.1|Name=mRNA_E_fasciculatus_S2_contig9830.17841.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1389bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9830:181..5520+ (Ectocarpus fasciculatus EfasUO2)
CAGGAGAGTCGCAAGCCGCGCAACGCCGCTTCCGGCGGGGCGAGGGTGTC
CCAGATGTCGTCGACCGTGACCGTGTCCAAGGCTTTCCGGGGGCAGCTGC
AGAACCTCATGGCCACCCTGCGCGCCACCGAGCCGCACTACATCAAGTGC
ATCAAGCCCAACAACGTGAAGGCTCCAGGAGGTTTCAGCGCGCACTTGGT
GCATCAGCAGCTGAACTACTCGGGAGTCCTGGAGGTGGTCCGCATCCGCA
GGGAGGCGTACCCCGGGCGCACGCCGTTCCTGGAGTTCTTCGAGAGGTTC
GAGCTGTTGCAGCGGCAGCTGACGAGGGCTTCTGTCGGGGGTGGAGGGGG
GGAAGGGGGGGGCTCTTCCCTGCCTTCGGCCGCCCACGCCACCGAGGAGG
AGGCTAAGGAGGGTTGCCGCACCATCCTGGAGGCCTTCTTGCCCGACAAG
TTCTACCAGATCGGGCACACGCGGGTTTTCCTGAAGGAGGAGGGGCAGGA
CATGCTCCGCTCGTGCATGCGGAACGTCTACCACCGCAAGGCCGCCCTCA
TCCAGGCCTGCGTCCGCGCGATGCAGGGCTCGATGAAGCTCAAGGAGAAG
AAGGCCGCCGCCATCGTTATCCACGCCGCCGCTCGCCGTTTCGTGCTCAG
GAACCGCTACAAGAGCGTGCTGTCAAAGGTGTTGGTGGTGCAGCGCTGGT
ACCGGAGCCGGATGATCCGACACAAGTACAAGGGCTGCATCGCCTCGGCC
GTTCTTATCCAGAAGCGGGTCCGCGGCATGCAGGCCCGGGAGTACCGCCT
GCTCCAAGAGGTTGCCGCCATCACCATACAGAGGCACGCCCGCGGCATGG
AAGGGAGGAGGTTTGCCGGCCTGATGCTCATGGAGCTGTGGATGGAGGAG
GAAGAGAACAAGAGGAAGGCCGAGGAGTTCAGGATGAGGAGGCGAGTTTT
GGCGGCGGCCATCATCCGCTCCTGGGTGCGGCGGATGGTGCAGAAGTACG
GCGTTAAGGCGCAACGGGTGGCGGCCGCCCGGATCCAGCGGGCTTGGCTG
CGCCGCGCTCGCAACCGCTGGCTGGAGGAGAGGGTGGGGCGCGTGTTCGC
CATCGCTCGGTCTGGAGACGTGGACGGGATGATGCGCGAGCTGAGGCACA
ACCCGGACGTGCTGTTCATGCGCGACAGGCACGACCGTTTCAAGACGCTG
CTGCACCTCGCCGCGACCAGCGGCAGCACCTCCCTCCTGTCTCTGCTTGA
CCCCCTCCCCGAAGACGTCCTGGTCCTCGACAGCGACGGCTGCACCCCGT
TGCACCACGCCGCCGCGTCTAGCAAGTACGACGTCGTCAAGTTCCTCGCG
TCCAGAGCCAACGGGAGGGTGAGTCGCAGCATGAGATAA
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