mRNA_E_fasciculatus_S2_contig9809.17811.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_E_fasciculatus_S2_contig9809.17811.1 vs.
Match: RanBP2-type (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB6_9PHAE)

HSP 1 Score: 476 bits (1224), Expect = 1.030e-153
Identity = 409/636 (64.31%), Postives = 432/636 (67.92%), Query Frame = 1

Query:  367 VGIVRDGGDIIRKDSGGCRXXXXXXXXXXXXESRDVAPGDAAEILGVAGRLVRTRGPWRCIFSKGRQPSSSVGEAGNNGTAATPAAAAAAVMQPSAPKPVGEVXXXXXXXXXXXXXXXAAGVMRRTERCESGGEGALLQAGERALSSVGGDGVRSNGG------GDD-------AATVGDDGRSGREAAEELSVVAAA--DGRAGFGGSGEGKDGSGGQEEAARPVREPRAEQGPVYLNTATMETAREPPAELVALADQAESAGEYLVFVPSHRFIAARAA--PVSALSLKGNVAAASASSHKCRNMDVDSNE----------------------AVRAATMSEAASAVGSAAERSAGPPRSPCSSAVNAG-------------NXXXXXXXXXXXXXXXXXXXXRGEQAQGTQQAPPLEASTTPSTVVKPVLGXXXXXXXXXXXXXXXXXX-TWDRLSSLPTIDLSQGVASAPLDVENAGDAGGNAAVEAVSATTVPVTWTCVACTLTNKARRTTCELCGTSRPKACHNKRPLSSTSLSADSGXXXXXXXHRRVGSVSKLRLRQPARSRSSVTPFTSRPGDGXXXXXXXXXXXXXXXXXXXXXXXXPHPPLSQSAATTPTNGFPAVRSQERSARP 2115
             GIV  GG+++R D+GGCR             SR+ A GDAAEILGVAGRLVRTRGPWRCIFS+GRQPS+SVGE  NNGTA   AAAAA VM             XXXXXXXXXXXXXAAGVMRRTE C+S        AGERAL S GG GV  NGG      G+        AATVG DGRSG +  +ELSVVAAA  DGRAGFGGSGEG+D  GGQEEAARPVREP A+QGPVYLNTATMET REPPAELVALADQAESAG+YLVFVPSHRF+AA A   P  A S   NVAAA A SH   NMDV+SN                       AV  A MSEA SAVG+A ER       P  +A +                XXXXXXXXXXX         RGEQAQ TQQ  PLEASTT STV K VLGXXXXXXXXXXXXXXXXXX TWDRLSSLPTIDLSQGVASAPLDVENAG  GGN AV      TV  TWTCVACTLTNKARRTTCELCGTSRPKA   +             XXXXXXXHRRVGSVSKLRLRQPARS  S+TPFTSRP  GXXXXXXXXXXXXXXXXX       P PPLSQ A TTP NGFP+VRSQERS+ P
Sbjct:  228 AGIVGGGGNVMRNDAGGCRSLVGRSSVVGGVASRNDAAGDAAEILGVAGRLVRTRGPWRCIFSQGRQPSASVGEVRNNGTAE--AAAAAGVMX------------XXXXXXXXXXXXXAAGVMRRTEGCKS--------AGERALRSAGGYGVERNGGCASNGVGESNGSGVGAAATVGGDGRSGSKTTQELSVVAAAAEDGRAGFGGSGEGRDRGGGQEEAARPVREPGADQGPVYLNTATMETVREPPAELVALADQAESAGDYLVFVPSHRFVAAAAGAVPAPASSHNSNVAAAPAFSHCSSNMDVESNXXXXXXXXXXXXXXXXXXXXXXAAVTVARMSEATSAVGAAGER-----EQPAVTAASESCSPXXXXXXXXXXXXXXXXXXXXXXVGPNPRRNGRGEQAQDTQQGSPLEASTTLSTVAKAVLGXXXXXXXXXXXXXXXXXXXTWDRLSSLPTIDLSQGVASAPLDVENAGGTGGNKAV------TVATTWTCVACTLTNKARRTTCELCGTSRPKASQQRXXXXXXXXXXX--XXXXXXXHRRVGSVSKLRLRQPARS-PSITPFTSRPAGGXXXXXXXXXXXXXXXXXS------PQPPLSQPAGTTPINGFPSVRSQERSSPP 821

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig9809.17811.1 vs.
Match: RanBP2-type (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ5_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 4.420e-62
Identity = 183/285 (64.21%), Postives = 190/285 (66.67%), Query Frame = 1

Query: 1048 METAREPPAELVALADQAESAGEYLVFVPSHRFIAARAA--PVSALSLKGNVAAASASSHKCRNMDVD---------------------SNEAVRAATMSEAASAVGSAAER----------SAGPPRSPCSSAVNAGNXXXXXXXXXXXXXXXXXXXXRGEQAQGTQQAPPLEASTTPSTVVKPVLGXXXXXXXXXXXXXXXXXXTWDRLSSLPTIDLSQGVASAPLDVENAGDAGGNAAVEAVSATTVPVTWTCVACTLTNKARRTTCELCGTSRPKACHNKR 1803
            METAREPPAELVALADQAESAG+YLVFVPSHRF+AA A   P SA S   NVAAA   SH+  NMDVD                     SN AV  A MSEAASAV +AAER          S  P             XXXXXXXXXXXX        RGEQAQ TQQ  PLEASTTPSTV K VLGXXXXXXXXXXXXXXXX  TWDRLSSLPTIDLSQGVASAP+DVEN G AGGN AV      TV  TWTCVACTLTNK+RRTTCE+CGTSRPKA    R
Sbjct:    1 METAREPPAELVALADQAESAGDYLVFVPSHRFVAAAAGAVPASASSRNSNVAAAPVFSHRSSNMDVDGNGSNPAAASALSHNSNMDTDSNAAVTVARMSEAASAVVAAAERVLQAVTAAGESCSPXXXXXXXXXXXXXXXXXXXXXXXXXGSNTRRNSRGEQAQDTQQGLPLEASTTPSTVAKAVLGXXXXXXXXXXXXXXXXG-TWDRLSSLPTIDLSQGVASAPVDVENGGGAGGNKAV------TVATTWTCVACTLTNKSRRTTCEVCGTSRPKASQQTR 278

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig9809.17811.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ4_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 1.480e-17
Identity = 46/67 (68.66%), Postives = 50/67 (74.63%), Query Frame = 2

Query:  407 IQAAVVALAAQTRPAVAVNPETSRLAMLLRFSVWRGGWSAPAGPGVASSRKDGSRRLRWERRVTTAP 607
            +QAA   LA + RP+VAV PET+R AMLLR S WRGGWS PAG G  SSRKD SRRLRWER   TAP
Sbjct:    1 MQAAAAPLAVEARPSVAVLPETTRQAMLLRSSAWRGGWSVPAGLGGVSSRKDDSRRLRWERCAATAP 67

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig9809.17811.1 vs.
Match: SAP (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ3_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.710e-16
Identity = 59/79 (74.68%), Postives = 62/79 (78.48%), Query Frame = 1

Query:    4 REKDKERLANARTARAAGLVSGSTGSGGGPRQALRPAGIGGGAAATAAGDGSPAPETEKIVISKEMKDGFSALIASARS 240
            REKDKER+ANA+TARA GLVSGS GSGGG RQALRPAG GG             PE+EKIVISKEMKDGFSALIASARS
Sbjct:  136 REKDKERMANAKTARA-GLVSGSAGSGGGSRQALRPAGTGG---XXXXXXXXXXPESEKIVISKEMKDGFSALIASARS 210

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig9809.17811.1 vs.

BLAST of mRNA_E_fasciculatus_S2_contig9809.17811.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
RanBP2-type	1.030e-153	64.31	domain-containing protein n=1 Tax=Ectocarpus sp. C...	[more]
RanBP2-type	4.420e-62	64.21	domain-containing protein n=1 Tax=Ectocarpus silic...	[more]
Uncharacterized	1.480e-17	68.66	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
SAP	1.710e-16	74.68	domain-containing protein n=1 Tax=Ectocarpus silic...	[more]