prot_E_fasciculatus_S2_contig978.17778.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig978.17778.1
Unique Nameprot_E_fasciculatus_S2_contig978.17778.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length372
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig978.17778.1 vs. uniprot
Match: D7G0E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0E7_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 7.940e-19
Identity = 55/74 (74.32%), Postives = 59/74 (79.73%), Query Frame = 0 
Query:  299 GRRSNTRHRIGGGAHDGKSRAAAGGEGGGDGRWGRAGGTAGRVAITDGRRAAYNAAMTVCGKAGRWDRALGLLE 372
            G RSN  HRIGGGAHDG+SRA AG    GDG+WGRAGGTAGRVA  DGR AA NAA+T+CGKAGRWD   GLLE
Sbjct:  385 GGRSNAGHRIGGGAHDGRSRATAGXXXAGDGKWGRAGGTAGRVAFPDGRGAASNAALTLCGKAGRWDPPRGLLE 458
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig978.17778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0E7_ECTSI7.940e-1974.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 21..80
e-value: 8.2E-14
score: 51.4
coord: 91..151
e-value: 6.4E-9
score: 35.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 8..35
e-value: 5.3E-5
score: 21.1
coord: 107..139
e-value: 4.1E-5
score: 21.5
coord: 36..69
e-value: 1.1E-8
score: 32.7
coord: 142..169
e-value: 0.003
score: 15.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 350..372
e-value: 0.03
score: 14.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 347..372
score: 7.618
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 69..103
score: 8.298
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1..33
score: 8.429
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 139..169
score: 8.342
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 34..68
score: 13.033
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 104..138
score: 10.413
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..243
e-value: 2.9E-47
score: 163.5
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 12..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig978contigE_fasciculatus_S2_contig978:22703..25273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig978.17778.1mRNA_E_fasciculatus_S2_contig978.17778.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig978 22703..25273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig978.17778.1 ID=prot_E_fasciculatus_S2_contig978.17778.1|Name=mRNA_E_fasciculatus_S2_contig978.17778.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=372bp
MNLTKQVTACGRGGNLEAALSLLDGMRGKGVSPNCFTYNSAIHACARKGK
WKLALELVERMKADGVTPNLTTYSSAADACAKGGNCVAALKILEEVRSLD
FEVGEILYNSVMEACAAVGQTKLSLSLLETMRKDGVKPSPATYTTAITAC
GRTADWKRALLLLVEMRKSFPSRPLDVNRTAAAAAAAAAAAAAAAGQRER
EVVGRGNGDDHSSSSSSSGSSVSGEDVGSSRHDESGTDDSKVGPDWWGKG
NVQEVMGATGGSRRRGGRRPPSLDPPKSASTPPVAATTTRPAAQPAGRGR
RSNTRHRIGGGAHDGKSRAAAGGEGGGDGRWGRAGGTAGRVAITDGRRAA
YNAAMTVCGKAGRWDRALGLLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat