mRNA_E_fasciculatus_S2_contig9773.17771.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9773.17771.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD13_ECTSI) HSP 1 Score: 414 bits (1063), Expect = 4.030e-145 Identity = 183/195 (93.85%), Postives = 189/195 (96.92%), Query Frame = 1
Query: 1 VYGLCVPCGLATARHRLDGSSWCVNAMCLTPCAARNIARHGYGIKGHCCADIMCSLVCAPCVTCQLLGETEKRGCIYDSWNDQSARSRREQPWKFGLFNCLDDLATCSYAFCCPMPAVGTIRTQMDDSDWIFNCLCINPFIARSLVRQNYNIEGTDSADCLLTCCCFPCSITQMLNETQHRGNVTGSPGFNSVER 585
+YGLCVPCGLATARHRLDGSSWCVNAMCL+PCAARNI RHGYGIKGHCCADI+CSLVCAPCVTCQLLGETEKRGC+YDSWNDQSARSRREQPWKFGLFNCLDD TCSY F CPMPAVGTIRTQMDDSDWIFNCLCINPFIARSLVRQ+YNIEGTDSADCLLTCCCFPCSITQMLNETQHRGNVTG PGFN+VER
Sbjct: 80 LYGLCVPCGLATARHRLDGSSWCVNAMCLSPCAARNIVRHGYGIKGHCCADILCSLVCAPCVTCQLLGETEKRGCVYDSWNDQSARSRREQPWKFGLFNCLDDCTTCSYGFFCPMPAVGTIRTQMDDSDWIFNCLCINPFIARSLVRQSYNIEGTDSADCLLTCCCFPCSITQMLNETQHRGNVTGCPGFNAVER 274
BLAST of mRNA_E_fasciculatus_S2_contig9773.17771.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTR6_9STRA) HSP 1 Score: 199 bits (505), Expect = 2.920e-61 Identity = 91/183 (49.73%), Postives = 116/183 (63.39%), Query Frame = 1
Query: 13 CVPCGLATARHRLDGSSWCVNAMCLTPCAARNIARHGYGIKGHCCADIMCSLVCAPCVTCQLLGETEKRGCIYDSW-NDQSARSRREQPWKFGLFNCLDDLATCSYAFCCPMPAVGTIRTQMDDSDWIFNCLCINPFIARSLVRQNYNIEGTDSADCLLTCCCFPCSITQMLNETQHRGNVTG 558
C PC +ATA R DGSSW N + PC ARN+ R GYGI+GHCC+D++C+ + PC+T QLL ET +RG + D W RS WKFGL +D YA C P A+G++RT +D SDWIFNC +N AR++VR YNIEGT + D +C C PC+I+QM+ E QHRG V G
Sbjct: 6 CPPCAVATAVTRFDGSSWANNCCFVNPCMARNVVREGYGIEGHCCSDLLCTCLFLPCMTGQLLAETAERGSVIDHWARSNRYRSPTLTQWKFGLCGFTEDPGKLFYALCMPWCALGSVRTDLDGSDWIFNCCFLNSCAARAMVRHAYNIEGTTANDVATSCFCLPCAISQMMIEVQHRGRVNG 188
BLAST of mRNA_E_fasciculatus_S2_contig9773.17771.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1M3_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.190e-42 Identity = 76/186 (40.86%), Postives = 102/186 (54.84%), Query Frame = 1
Query: 1 VYGLCVP-CGLATARHRLDGSSWCVNAMCLTPCAARNIARHGYGIKGHCCADIMCSLVCAPCVTCQLLGETEKRGCIYDSWNDQSARSRREQPWKFGLFNCLDDLATCSYAFCCPMPAVGTIRTQMDDSDWIFNCLCINPFIARSLVRQNYNIEGTDSADCLLTCCCFPCSITQMLNETQHRGNVT 555
++ C+P C +A AR + DGS+ C N MC+ A RNI R GY IKG C D++ +L C CV Q++ E E RG + + S R E PWK +F+ + + Y CCP A+ RT D SD FN LC P +ARS++R+ YNIEG+ D L C C Q++NE RG VT
Sbjct: 34 IFACCLPWCAVADARTKFDGSNCCFNVMCVGIVAGRNIIREGYKIKGGCIGDLIATLFCPVCVMTQMMNEVESRGKVTAQYG--SNRPATEVPWKHSIFDICFNSSNFIYGCCCPSCAIAQARTDFDGSDCCFNFLCFTPCLARSVIREGYNIEGSCIMDILCPWLCVECVACQLMNEVSDRGKVT 217
BLAST of mRNA_E_fasciculatus_S2_contig9773.17771.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYH0_9STRA) HSP 1 Score: 149 bits (376), Expect = 3.140e-41 Identity = 77/185 (41.62%), Postives = 104/185 (56.22%), Query Frame = 1
Query: 4 YGLCVPC-GLATARHRLDGSSWCVNAMCLTPCAARNIARHGYGIKGHCCADIMCSLVCAPCVTCQLLGETEKRGCIYDSWNDQSARSRREQPW-KFGLFNCLDDLATCSYAFCCPMPAVGTIRTQMDDSDWIFNCLCINPFIARSLVRQNYNIEGTDSADCLLTCCCFPCSITQMLNETQHRGNV 552
YGL PC +ATAR DGS+WC N + AAR+I R GY IKG +DI ++ CA C QL+ E E RG + + +AR QPW K G+ + + + CCP A+ R+ D S++ FNC C++P +ARS++R+ YNIEG D + CCC C+ QMLNE RG V
Sbjct: 51 YGLFCPCCAIATARTYYDGSNWCFNCLVTPHLAARDIIREGYNIKGSWLSDIFLTIFCAGCSAVQLMNEVETRGLVSADFG--TARPPDPQPWTKKGVCS---NFGNFFFGMCCPHCAISQARSSFDGSEFCFNCCCVSPCLARSVIREGYNIEGNCFGDLIYPCCCPSCAACQMLNEVDERGKV 230
BLAST of mRNA_E_fasciculatus_S2_contig9773.17771.1 vs.
Match: protein (PLANT CADMIUM RESISTANCE 2-like isoform X1 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8B5Y8_NELNU) HSP 1 Score: 65.5 bits (158), Expect = 1.190e-9 Identity = 33/110 (30.00%), Postives = 50/110 (45.45%), Query Frame = 1
Query: 259 SRREQPWKFGLFNCLDDLATCSYAFCCPMPAVGTIRTQMDDSD-------------WIF-NCLCINPFIARSLVRQNYNIEGTDSADCLLTCCCFPCSITQMLNETQHRG 546
S+ + PW GLF+C +D +C CP G I + W+ C I RS++RQ ++++ T ADCL+ CCC C++ Q E + RG
Sbjct: 56 SQAQYPWSSGLFDCFNDCESCCLTLWCPCITFGRIAEIVSKGSSSCVGSASLYTLIWVLLGCPWIYSCTYRSMLRQQFSLQETPCADCLVHCCCDCCALCQEYRELKQRG 165
BLAST of mRNA_E_fasciculatus_S2_contig9773.17771.1 vs.
Match: 5'-deoxynucleotidase (n=1 Tax=Mycena kentingensis (nom. inval.) TaxID=1325293 RepID=A0A8H6WHG2_9AGAR) HSP 1 Score: 66.6 bits (161), Expect = 2.180e-9 Identity = 38/121 (31.40%), Postives = 50/121 (41.32%), Query Frame = 1
Query: 259 SRREQPWKFGLFNCLDDLATCSYAFCCPMPAVGTIRTQM-----------------DDSDWIFNCL-----------CINPFIARSLVRQNYNIEGTDSADCLLTCCCFPCSITQMLNETQ 537
S ++ W GL +C D TC YA+CCP G + +M S W CL CIN R VR Y I+G DC+ +CCC PC +TQ+ E +
Sbjct: 266 SHGKREWSHGLCDCFGDCGTCFYAWCCPCIVHGKNKQRMAHLQERGSPDPDGGSCCSGSCWAHCCLTSFLGVGFILQCIN----RGEVRARYGIDGGGCGDCMASCCCTPCDLTQVSREIE 382
BLAST of mRNA_E_fasciculatus_S2_contig9773.17771.1 vs.
Match: Uncharacterized (protein n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H6YU30_9AGAR) HSP 1 Score: 63.9 bits (154), Expect = 2.750e-9 Identity = 38/123 (30.89%), Postives = 52/123 (42.28%), Query Frame = 1
Query: 268 EQPWKFGLFNCLDDLATC--SYAFCC---------------------PMPAVGTIRTQMDDSDWIFNCLCINPFIARSLVRQNYNIEGTDSADCLLTCCCFPCSITQMLNETQHRGNVTGSPG 567
++ W +G+F+CL D TC S+ C PM V + T M F C + R+ R Y+I+G + DCLL CCC PCS+TQ E + G PG
Sbjct: 30 QREWSYGVFDCLSDPLTCVVSWFLPCVSYGRNRARYNALENGAVSKDPMEGVVSNETIMYGLAQCFGCGGLIGMGGRAQTRGRYSIQGDGATDCLLACCCAPCSLTQESREIELEEQSLGHPG 152
BLAST of mRNA_E_fasciculatus_S2_contig9773.17771.1 vs.
Match: PLAC8-domain-containing (protein n=1 Tax=Fibularhizoctonia sp. CBS 109695 TaxID=436010 RepID=A0A166AB00_9AGAM) HSP 1 Score: 60.5 bits (145), Expect = 2.500e-8 Identity = 36/112 (32.14%), Postives = 47/112 (41.96%), Query Frame = 1
Query: 268 EQPWKFGLFNCLDDLATCSYAFCCPMPAVGTIRTQ--------------------MDDSDWIFNCLCINPFIA----RSLVRQNYNIEGTDSADCLLTCCCFPCSITQMLNE 531
E+ W GL C D TC A CP G I + MD ++ C+ +I RS VR+ YNI GT DC+ +CCC+PC +TQ E
Sbjct: 6 ERDWTHGLMACFADCGTCCLATWCPCFVFGQISKRRKYLEKNGLPDPEYGGTGCGMDCCNFHGGQPCMLSWICQMGGRSHVRKRYNIRGTGCGDCVTSCCCYPCGLTQESRE 117
BLAST of mRNA_E_fasciculatus_S2_contig9773.17771.1 vs.
Match: protein (PLANT CADMIUM RESISTANCE 2-like n=1 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E693FFF) HSP 1 Score: 60.5 bits (145), Expect = 3.340e-8 Identity = 35/113 (30.97%), Postives = 53/113 (46.90%), Query Frame = 1
Query: 277 WKFGLFNCLDDLATCSYAFCCPMPAVGTIRTQMDDSDW------IFNCLC--------INPFIARSLVRQNYNIEGTDSADCLLTCCCFPCSITQMLNETQHRGNVTGSPGFN 573
W GLF+C D ++C F CP + G + +D + C+ I I R+ +R+ Y IEG + DC+++CCC SI Q E + RG V S G++
Sbjct: 7 WSTGLFDCFSDTSSCCLTFWCPCVSFGRVAEIVDRGTTSCCMHGVLYCVLGGFSHFGSIYACIYRTKLRRVYGIEGNQTCDCIISCCCGLISICQEHRELEARG-VNVSAGWD 118
BLAST of mRNA_E_fasciculatus_S2_contig9773.17771.1 vs.
Match: Uncharacterized (protein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6XTJ2_9AGAR) HSP 1 Score: 61.6 bits (148), Expect = 5.960e-8 Identity = 34/124 (27.42%), Postives = 51/124 (41.13%), Query Frame = 1
Query: 268 EQPWKFGLFNCLDDLATCSYAFCCPMPAVGTIRTQMDDSDW------------------------IFNCLCINPFIARSLVRQNYNIEGTDSADCLLTCCCFPCSITQMLNETQHRGNVTGSPG 567
++ W +G+F+CL D TC ++ P + G R + + + F C + R+ R Y+I+G + DCLL CCC PCS+TQ E G PG
Sbjct: 111 QREWSYGVFDCLADPLTCVVSWFLPCVSYGRNRARYNSLELNGTVSKDPMEGVISNESIMYGVAQCFGCGGLIGMGGRAQTRGRYSIQGDGATDCLLACCCAPCSLTQESREIALEEQSLGHPG 234 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9773.17771.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9773.17771.1 >prot_E_fasciculatus_S2_contig9773.17771.1 ID=prot_E_fasciculatus_S2_contig9773.17771.1|Name=mRNA_E_fasciculatus_S2_contig9773.17771.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=170bp MCLTPCAARNIARHGYGIKGHCCADIMCSLVCAPCVTCQLLGETEKRGCIback to top mRNA from alignment at E_fasciculatus_S2_contig9773:187..2742+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9773.17771.1 ID=mRNA_E_fasciculatus_S2_contig9773.17771.1|Name=mRNA_E_fasciculatus_S2_contig9773.17771.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2556bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9773:187..2742+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9773:187..2742+ >mRNA_E_fasciculatus_S2_contig9773.17771.1 ID=mRNA_E_fasciculatus_S2_contig9773.17771.1|Name=mRNA_E_fasciculatus_S2_contig9773.17771.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=510bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9773:187..2742+ (Ectocarpus fasciculatus EfasUO2)back to top |