mRNA_E_fasciculatus_S2_contig9772.17770.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9772.17770.1
Unique NamemRNA_E_fasciculatus_S2_contig9772.17770.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9772.17770.1 vs.
Match: FZ (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG5_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 1.680e-70
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 1
Query:    1 LQYSGIDEYGNPGSPVPRFTDNRDCQSAFKAYMCYINFPRCDDDGNSLVTCRSACENLMVACQNQRDMWRCGESQYFNGYEAEEPETDSDGNPVYLRDFFPGK 309
            LQ  GIDEYGNPGSPVPRFTDNRDCQSAFKAYMCYINFPRCDDD NSLVTCRSACENLMVACQNQRDMWRCGESQYFNGYEAEEPETDSDGNPVYLRDFFPG+
Sbjct:  141 LQKQGIDEYGNPGSPVPRFTDNRDCQSAFKAYMCYINFPRCDDDENSLVTCRSACENLMVACQNQRDMWRCGESQYFNGYEAEEPETDSDGNPVYLRDFFPGQ 243          
BLAST of mRNA_E_fasciculatus_S2_contig9772.17770.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE42_9STRA)

HSP 1 Score: 130 bits (326), Expect = 4.100e-35
Identity = 57/104 (54.81%), Postives = 77/104 (74.04%), Query Frame = 1
Query:    1 LQYSGIDEYGNPGSPVPRFTDNRDCQSAFKAYMCYINFPRC-DDDGNSLVTCRSACENLMVACQNQRDMWRCGESQYFNGYEAEEPETDSDGNPVYLRDFFPGK 309
            LQ +G DE+G  G+PVPRF++N DC+ AF+ Y C+ NFPRC ++ G +L+TC SACEN+M+AC+  +D+WRCG S+Y NGY  E P   S G   YLRDF+PG+
Sbjct:  121 LQKAGRDEFGARGAPVPRFSNNPDCRDAFRNYACWTNFPRCIEETGETLMTCHSACENMMIACRIPKDLWRCGPSEYLNGYSPEAPTLLS-GVVTYLRDFYPGQ 223          
BLAST of mRNA_E_fasciculatus_S2_contig9772.17770.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZ54_HETAK)

HSP 1 Score: 128 bits (322), Expect = 1.670e-34
Identity = 58/114 (50.88%), Postives = 74/114 (64.91%), Query Frame = 1
Query:   13 GIDEYGNPGSPVPRFTDNRDCQSAFKAYMCYINFPRCDDDGNSLVTCRSACENLMVACQNQRDMWRCGESQYFN---------------GYEAEEPETDSDGNPVYLRDFFPGK 309
            G DE+GN G+   RFT N DCQ+A+ AY C+INFPRCD+   SL+TCRSACENLM AC   +DMWRCG+S+YFN                 +  E E ++ G P+Y RD+FPG+
Sbjct:  128 GYDEWGNKGTTTVRFTKNDDCQAAYAAYFCWINFPRCDEQDESLMTCRSACENLMQACGYVKDMWRCGKSEYFNYGGSFNLDESHPEKAASQTAEEEEETGGLPIYYRDYFPGQ 241          
BLAST of mRNA_E_fasciculatus_S2_contig9772.17770.1 vs.
Match: FZ (domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W900_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.150e-34
Identity = 56/103 (54.37%), Postives = 69/103 (66.99%), Query Frame = 1
Query:    1 LQYSGIDEYGNPGSPVPRFTDNRDCQSAFKAYMCYINFPRCDDDGNSLVTCRSACENLMVACQNQRDMWRCGESQYFNGYEAEEPET-DSDGNPVYLRDFFPG 306
            L   G+DE+GN G  VPR+T+N+DCQ A K YMC++NFPRCD+ G SL+ CRS CEN   AC   +D+WRCG+ QY NGY AE   T +  G   Y R  FPG
Sbjct:  135 LNSQGVDEWGNKGEIVPRYTENKDCQDALKNYMCWLNFPRCDNAGRSLIMCRSVCENFFKACMQHKDLWRCGDPQYVNGYSAEISTTVNQAGELQYFRYPFPG 237          
BLAST of mRNA_E_fasciculatus_S2_contig9772.17770.1 vs.
Match: FZ (domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FF43_9STRA)

HSP 1 Score: 125 bits (315), Expect = 8.640e-34
Identity = 55/103 (53.40%), Postives = 70/103 (67.96%), Query Frame = 1
Query:    1 LQYSGIDEYGNPGSPVPRFTDNRDCQSAFKAYMCYINFPRCDDDGNSLVTCRSACENLMVACQNQRDMWRCGESQYFNGYEAE-EPETDSDGNPVYLRDFFPG 306
            +Q +G+DE+G  G  VPR+T+N+DCQ AF+ YMC++NFPRCDD G SLV CRS CEN   AC   +D+WRCG+ QY +GY AE     +  G   Y R  FPG
Sbjct:   94 MQSAGVDEWGGLGEIVPRYTENKDCQDAFRNYMCWLNFPRCDDAGRSLVLCRSVCENFFKACMQPKDLWRCGQPQYVDGYTAEISTSANMAGVLQYYRAPFPG 196          
BLAST of mRNA_E_fasciculatus_S2_contig9772.17770.1 vs.
Match: FZ (domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZBS8_9STRA)

HSP 1 Score: 124 bits (312), Expect = 4.340e-33
Identity = 55/103 (53.40%), Postives = 70/103 (67.96%), Query Frame = 1
Query:    1 LQYSGIDEYGNPGSPVPRFTDNRDCQSAFKAYMCYINFPRCDDDGNSLVTCRSACENLMVACQNQRDMWRCGESQYFNGYEAE-EPETDSDGNPVYLRDFFPG 306
            +Q +G+DE+G  G  VPR+T+N+DCQ AF+ YMC++NFPRCDD G SLV CRS CEN   AC   +D+WRCG+ QY +GY AE     +  G   Y R  FPG
Sbjct:   87 MQSAGVDEWGGLGEIVPRYTENKDCQDAFRNYMCWLNFPRCDDAGRSLVLCRSVCENFFKACMQPKDLWRCGQPQYVDGYTAEISTIANMAGVLQYYRAPFPG 189          
BLAST of mRNA_E_fasciculatus_S2_contig9772.17770.1 vs.
Match: FZ (domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T935_9STRA)

HSP 1 Score: 124 bits (310), Expect = 6.210e-33
Identity = 54/99 (54.55%), Postives = 67/99 (67.68%), Query Frame = 1
Query:   13 GIDEYGNPGSPVPRFTDNRDCQSAFKAYMCYINFPRCDDDGNSLVTCRSACENLMVACQNQRDMWRCGESQYFNGYEAE-EPETDSDGNPVYLRDFFPG 306
            G+DE+G  G  VPR+T+N+DCQ AF+ YMC++NFPRCDD G SL+ CRS CEN   AC   +D+WRCG+ QY NGY AE     +  G   Y R  FPG
Sbjct:  105 GVDEWGALGEIVPRYTENKDCQDAFRNYMCWLNFPRCDDAGRSLILCRSVCENFFKACMQHKDLWRCGDPQYVNGYSAEISTFANKAGVLQYYRAPFPG 203          
BLAST of mRNA_E_fasciculatus_S2_contig9772.17770.1 vs.
Match: FZ (domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SC41_SAPDV)

HSP 1 Score: 123 bits (308), Expect = 9.720e-33
Identity = 56/97 (57.73%), Postives = 66/97 (68.04%), Query Frame = 1
Query:   19 DEYGNPGSPVPRFTDNRDCQSAFKAYMCYINFPRCDDDGNSLVTCRSACENLMVACQNQRDMWRCGESQYFNGYEAE-EPETDSDGNPVYLRDFFPG 306
            DE+GN G  VPRFT+NRDCQ AF+ YMC++NFPRCDD G SLV CRS CEN   AC   +D+WRCG+  Y NGYE E     ++ G   Y R  FPG
Sbjct:   96 DEWGNTGEIVPRFTENRDCQDAFRNYMCWLNFPRCDDAGVSLVMCRSVCENYFKACMQAKDLWRCGDPAYVNGYEPEISTYANNLGELQYYRFPFPG 192          
BLAST of mRNA_E_fasciculatus_S2_contig9772.17770.1 vs.
Match: FZ (domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C8M8_SAPPC)

HSP 1 Score: 122 bits (307), Expect = 1.370e-32
Identity = 57/101 (56.44%), Postives = 67/101 (66.34%), Query Frame = 1
Query:   19 DEYGNPGSPVPRFTDNRDCQSAFKAYMCYINFPRCDDDGNSLVTCRSACENLMVACQNQRDMWRCGESQYFNGYEAEEPETDSDGNPV-----YLRDFFPG 306
            DE+GN G  VPRFT+NRDCQ AF+ YMC++NFPRCDD G SL+ CRS CEN   AC   +D+WRCG+  Y NGYE   PE  +  N V     Y R  FPG
Sbjct:   95 DEWGNAGEIVPRFTENRDCQDAFRNYMCWLNFPRCDDAGVSLIMCRSVCENYFKACMQAKDLWRCGDPAYVNGYE---PEISTYANNVAGELQYYRFPFPG 192          
BLAST of mRNA_E_fasciculatus_S2_contig9772.17770.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVU4_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.600e-32
Identity = 54/104 (51.92%), Postives = 76/104 (73.08%), Query Frame = 1
Query:    1 LQYSGIDEYGNPGSPVPRFTDNRDCQSAFKAYMCYINFPRCDDDGN-SLVTCRSACENLMVACQNQRDMWRCGESQYFNGYEAEEPETDSDGNPVYLRDFFPGK 309
            L+ +G++EYG+ G    RF    DC++AF+ YMC+INFPRCD   + S+ TCRSACEN  ++C  +R +WRCG+S+YFNGYE E+P   + GN  YLR++FPG+
Sbjct:  125 LRKAGVNEYGDKGRVRRRFYKKPDCRNAFRNYMCWINFPRCDVARDLSMPTCRSACENFFISCGYERGLWRCGKSKYFNGYEPEKPIISALGNVSYLREYFPGQ 228          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9772.17770.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
FZ1.680e-7096.12domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Uncharacterized4.100e-3554.81protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical1.670e-3450.88protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
FZ2.150e-3454.37domain-containing protein n=1 Tax=Aphanomyces eute... [more]
FZ8.640e-3453.40domain-containing protein n=1 Tax=Aphanomyces asta... [more]
FZ4.340e-3353.40domain-containing protein n=1 Tax=Aphanomyces asta... [more]
FZ6.210e-3354.55domain-containing protein n=1 Tax=Aphanomyces inva... [more]
FZ9.720e-3357.73domain-containing protein n=1 Tax=Saprolegnia dicl... [more]
FZ1.370e-3256.44domain-containing protein n=1 Tax=Saprolegnia para... [more]
Hypothetical1.600e-3251.92protein n=1 Tax=Spumella elongata TaxID=89044 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9772contigE_fasciculatus_S2_contig9772:4617..5682 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score222.6
Seed ortholog evalue8.5e-56
Seed eggNOG ortholog2880.D7FLG5
Model size315
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.Fz domain
EggNOG OGs2CB5P@1,2RXQZ@2759
Cds size315
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842620.5161774-CDS-E_fasciculatus_S2_contig9772:4616..48121696842620.5161774-CDS-E_fasciculatus_S2_contig9772:4616..4812Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9772 4617..4812 -
1696842620.527477-CDS-E_fasciculatus_S2_contig9772:5563..56821696842620.527477-CDS-E_fasciculatus_S2_contig9772:5563..5682Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9772 5564..5682 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9772.17770.1prot_E_fasciculatus_S2_contig9772.17770.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9772 4617..5682 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9772.17770.1

>prot_E_fasciculatus_S2_contig9772.17770.1 ID=prot_E_fasciculatus_S2_contig9772.17770.1|Name=mRNA_E_fasciculatus_S2_contig9772.17770.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=105bp
LQYSGIDEYGNPGSPVPRFTDNRDCQSAFKAYMCYINFPRCDDDGNSLVT
CRSACENLMVACQNQRDMWRCGESQYFNGYEAEEPETDSDGNPVYLRDFF
PGKM*
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mRNA from alignment at E_fasciculatus_S2_contig9772:4617..5682-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9772.17770.1 ID=mRNA_E_fasciculatus_S2_contig9772.17770.1|Name=mRNA_E_fasciculatus_S2_contig9772.17770.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1066bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9772:4617..5682- (Ectocarpus fasciculatus EfasUO2)
TTACAATACTCAGGTATCGACGAGTACGGGAACCCAGGTTCTCCGGTCCC ACGATTCACAGACAACAGGGACTGCCAGTCGGCCTTCAAGGCCTACATGT GCTACATCAATTTCCCGAGGTTAGCTGCGCAACTACAGGCCACAGACACA GTGAAGCTCTTGGGCACGAACCTCTGGCCCCGAAGGGATGCTCCGGTATG GGGCGTACCCGTCAGCTACATAGATCCGCAGGTCTCTTCGTCCCACGGAT AGCACCTCCTACATACAGACGGTACAGCTACACTGGACCAATAACGCGTT GTATGTCTACAGCCGATACCTTCATGGCGGGAAATCGCTGATGGTTCACG GACGACGTGGGATGCTCTCGCGGACTGAGCTTGGTCCACGCCCTACATGT AGTCTGAGATCAAGAAAGAAGTCAAAAGGACACTGCTAGACGACTTCGTT ATTTTCTTCTTCTGAAATACACATACTGTCCGGCAAGCGGATTCATTGCA CGATCGAGCTAGCCCGGGGCCCCGACACAGTTTTGAGGCGAACGTCAAAC TCAAAAGAACGAATACGGCAAATGGAACCAGTTCTGGTGGCTTGCAGGAG CACATGCCCTGCCTGTTGGCATTAGGCTACTTGTTTCCGTCATGCTATGT GGTCAGTGAGCAGGTACCATCAACTACCCACTTTAGACTAGTCACCCCGC TACGATAGAACAAACATTCGAGCTGTTCAACAAGAAGAGCAGGACAGCTC CTGACTTGCGGCAGAAGTGCAGCACCCTACCGATAGCCCAACGGCCTTAA CAATGCGCCTTCAGCAGGCCACGACAACCTTCTTTTCCCTAAACCCTGCG AACGACAATTAATTTGTTAGGTGCGATGACGACGGAAACAGCCTTGTGAC TTGCAGAAGCGCGTGCGAGAATCTGATGGTAGCCTGTCAGAACCAGAGGG ATATGTGGCGCTGCGGCGAGAGCCAGTACTTCAACGGCTACGAAGCGGAA GAGCCGGAGACCGACTCCGACGGCAACCCCGTCTACCTCAGAGACTTCTT CCCAGGCAAGATGTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9772:4617..5682-

>mRNA_E_fasciculatus_S2_contig9772.17770.1 ID=mRNA_E_fasciculatus_S2_contig9772.17770.1|Name=mRNA_E_fasciculatus_S2_contig9772.17770.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=315bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9772:4617..5682- (Ectocarpus fasciculatus EfasUO2)
TTACAATACTCAGGTATCGACGAGTACGGGAACCCAGGTTCTCCGGTCCC
ACGATTCACAGACAACAGGGACTGCCAGTCGGCCTTCAAGGCCTACATGT
GCTACATCAATTTCCCGAGGTGCGATGACGACGGAAACAGCCTTGTGACT
TGCAGAAGCGCGTGCGAGAATCTGATGGTAGCCTGTCAGAACCAGAGGGA
TATGTGGCGCTGCGGCGAGAGCCAGTACTTCAACGGCTACGAAGCGGAAG
AGCCGGAGACCGACTCCGACGGCAACCCCGTCTACCTCAGAGACTTCTTC
CCAGGCAAGATGTGA
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