mRNA_E_fasciculatus_S2_contig9772.17768.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9772.17768.1
Unique NamemRNA_E_fasciculatus_S2_contig9772.17768.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9772.17768.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG4_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 7.900e-93
Identity = 166/228 (72.81%), Postives = 180/228 (78.95%), Query Frame = 1 
Query:   22 VCFYFARYLIWKKDDDTEIEIPPPAQLKKLVQSAGNAGATVDEGAPAATTGGAGGAASSLGPMMDKMLTSKMAVKKYDMKTIQGLRRRQFWASLMMCYTHLKRGMIKPMMFQVCFGVLSFVDNPLVHIHLLGREAKGNLARPFKKQGLMESLHGPMEAMAAKVRRDVAAAEAKAAEARAEAESGSATAGXXXXXXXXXXXXXXXXGGEMPDIEILTNGDESDDVVVES 705
            +C Y  RYLIWKK DDTE+E+PPPAQLKKL+Q AG AG T +EGAPAAT       AS LGP+MDKM+TS+MAVKKYDMK IQG+RRRQFWASLMMCYTHL+RGMIKPMMFQV FGVLS +DNPLVHI+LLGREAKGNLARPFKKQGLMESL GPME MA K   +               + GSATAG    XXXXXXXXXX  GGEMPDIEILTNGDESDDVV ES
Sbjct:   55 LCMYI-RYLIWKKGDDTEVEVPPPAQLKKLIQDAGKAGVTGNEGAPAATXXXXXXXASPLGPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLSLLDNPLVHIYLLGREAKGNLARPFKKQGLMESLSGPMETMATKAAAEAQXXXXXXXXXXXXEDKGSATAGVGEEXXXXXXXXXX--GGEMPDIEILTNGDESDDVVEES 279
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BLAST of mRNA_E_fasciculatus_S2_contig9772.17768.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF45_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 2.460e-89
Identity = 166/228 (72.81%), Postives = 181/228 (79.39%), Query Frame = 1 
Query:   22 VCFYFARYLIWKKDDDTEIEIPPPAQLKKLVQSAGNAGATVDEGAPAATTGGAGGAASSLGPMMDKMLTSKMAVKKYDMKTIQGLRRRQFWASLMMCYTHLKRGMIKPMMFQVCFGVLSFVDNPLVHIHLLGREAKGNLARPFKKQGLMESLHGPMEAMAAKVRRDVAAAEAKAAEARAEAESGSATAGXXXXXXXXXXXXXXXXGGEMPDIEILTNGDESDDVVVES 705
            +C Y  RYLIWKKDDD E+E+PPPAQLKKL+Q AG AG T +EGA A        AAS LGP+MDKM+TS+MAVKKYDMK IQG+RRRQFWASLMMCYTHL+RGMIKPMMFQV FGVLSF+DNPLVHI+LLGREAKGNLARPFKKQGLMESL G MEAMA K   +         EAR E + GSATA XXXXXXXXXX       GEMPDIEILTNG+ESDDVV ES
Sbjct:  279 LCMYI-RYLIWKKDDDAEVEVPPPAQLKKLIQDAGKAGVTGNEGAAATXXXXXXXAASPLGPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLSFLDNPLVHIYLLGREAKGNLARPFKKQGLMESLSGSMEAMATKAAAEAQXXXXXXXEARLEEDKGSATAXXXXXXXXXXX-------GEMPDIEILTNGNESDDVVEES 498
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BLAST of mRNA_E_fasciculatus_S2_contig9772.17768.1 vs.
Match: Uncharacterized (protein HYP6 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YP71_AURAN)

HSP 1 Score: 67.8 bits (164), Expect = 1.950e-10
Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = 1 
Query:  172 GGAGGAASSLGPMMDKMLTSKMAVKKYDMKTIQGLRRRQFWASLMMCYTHLKRGMIKPMMFQVCFGVLSFVDNPLVHIHLLGREAKGNLARPF 450
            G AGG A   G ++DK+ + +  V+ YD+  ++  R  Q  +  +MC+ H+K+GM++P++ Q   GV + V  PLV  HLLGR+    L RPF
Sbjct:   13 GDAGGVA---GALVDKLTSKETTVRDYDLDMVKKGRNSQLGSLALMCFLHIKKGMVQPLVAQAVMGVAALVKEPLVQAHLLGRD----LERPF 98
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BLAST of mRNA_E_fasciculatus_S2_contig9772.17768.1 vs.
Match: Inorganic (phosphate transporter Pho88 (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W146_9FUNG)

HSP 1 Score: 55.8 bits (133), Expect = 7.940e-7
Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 1 
Query:  232 KMAVKKYDMKTIQGLRRRQFWASLMMCYTHLKRGMIKPMMFQVCFGVLSFVDNPLVHIHLLGREAKGNLARPFK 453
            +  +K YD+K I+   + Q  A L++   H K G ++P++ Q   G+ + +   LV IH+LGR A G LARPFK
Sbjct:   12 RSTIKDYDIKKIKAQIQSQATAMLIIGLMHWKWGYLRPLLLQSILGIKAILALQLVQIHILGRPAIGELARPFK 85
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BLAST of mRNA_E_fasciculatus_S2_contig9772.17768.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1H3_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.070e-6
Identity = 32/85 (37.65%), Postives = 46/85 (54.12%), Query Frame = 1 
Query:  244 KKYDMKTIQGLRRRQFWASLMMCYTHLKRGMIKPMMFQVCFGVLSFVDNPLVHIHLLGREAKGNLARPFKK--QGLMESLHGPME 492
            K+YDMK ++     QF+  LMM   H K    K ++      +L    + L  IH+LGREA G+LARPFK   + +ME +   M+
Sbjct:   19 KEYDMKLVKQEISSQFFPMLMMYVLHFKAAWHKAIVLAPVSSLLQLFSSQLFQIHILGREATGDLARPFKSGSEKMMEKMQSAMD 103
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BLAST of mRNA_E_fasciculatus_S2_contig9772.17768.1 vs.
Match: Uncharacterized (protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4NWR5_BATDJ)

HSP 1 Score: 54.7 bits (130), Expect = 1.310e-5
Identity = 31/95 (32.63%), Postives = 48/95 (50.53%), Query Frame = 1 
Query:  205 PMMDKMLTSKMAVKKYDMKTIQGLRRRQFWASLMMCYTHLKRGMIKPMMFQVCFGVLSFVDNPLVHIHLLGREAKGNLARPFKKQ-GLMESLHGP 486
            P   K++TS   V  YD + ++    +   A  ++ + HLK G ++P+  Q    +     NP+  IH+LG+ A  NLARPFK   G+     GP
Sbjct:   74 PNESKVVTS--TVGDYDKEQVKNFFTQGLTAVAILAFMHLKWGYLRPLFIQAIMSLRQLYSNPMFQIHVLGKPATDNLARPFKTGFGMASQTAGP 166
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BLAST of mRNA_E_fasciculatus_S2_contig9772.17768.1 vs.
Match: Inorganic (phosphate transporter n=1 Tax=Coprinopsis marcescibilis TaxID=230819 RepID=A0A5C3KM15_9AGAR)

HSP 1 Score: 53.1 bits (126), Expect = 4.410e-5
Identity = 33/96 (34.38%), Postives = 47/96 (48.96%), Query Frame = 1 
Query:  217 KMLTSKMAVKKYDMKTIQGLRRRQFWASLMMCYTHLKRGMIKPMMFQVCFGVLSFVDNPLVHIHLLGREAKGNLARPFKKQGLMESLHGPMEAMAA 504
            K++T+   V+ YD++    L R  +    MM   H      +P+  Q   G+ S  D   V IHLLG+EA G+L RPFK   +  +  GP    AA
Sbjct:   78 KLVTT--TVRDYDLQETSKLLRASYMGLAMMAVMHFYFKFTQPLFVQSLMGLKSLYDAKEVAIHLLGKEATGDLQRPFKVASMFGAASGPQTDAAA 171
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BLAST of mRNA_E_fasciculatus_S2_contig9772.17768.1 vs.
Match: Uncharacterized (protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H6S7_SPIPD)

HSP 1 Score: 53.1 bits (126), Expect = 4.700e-5
Identity = 28/84 (33.33%), Postives = 48/84 (57.14%), Query Frame = 1 
Query:  205 PMMDKML-TSKMAVKKYDMKTIQGLRRRQFWASLMMCYTHLKRGMIKPMMFQVCFGVLSFVDNPLVHIHLLGREAKGNLARPFK 453
            PM  K + T +  +K YD+  ++   R Q  A  ++ + H K G ++P++ Q   G+ +     LV +H+LG+ A G+LARP+K
Sbjct:   73 PMEPKNVETVRTTIKDYDITKLKETLRGQVVAMAILGFIHYKWGYLRPLLLQSVLGLRTLYQAQLVQVHILGKPATGDLARPWK 156
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9772.17768.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
Uncharacterized7.900e-9372.81protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.460e-8972.81protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.950e-1038.71protein HYP6 n=1 Tax=Aureococcus anophagefferens T... [more]
Inorganic7.940e-739.19phosphate transporter Pho88 (Fragment) n=1 Tax=Bly... [more]
Hypothetical1.070e-637.65protein (Fragment) n=1 Tax=Florenciella parvula Ta... [more]
Uncharacterized1.310e-532.63protein n=2 Tax=Batrachochytrium dendrobatidis Tax... [more]
Inorganic4.410e-534.38phosphate transporter n=1 Tax=Coprinopsis marcesci... [more]
Uncharacterized4.700e-533.33protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9772contigE_fasciculatus_S2_contig9772:318..2461 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score70.9
Seed ortholog evalue9.3e-10
Seed eggNOG ortholog44056.XP_009042212.1
Preferred namePHO88
Model size711
KEGG koko:K01166
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005789,GO:0006605,GO:0006807,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0006886,GO:0006996,GO:0007029,GO:0008104,GO:0008150,GO:0008152,GO:0009987,GO:0010256,GO:0010467,GO:0012505,GO:0015031,GO:0015698,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0019538,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0033036,GO:0033365,GO:0034613,GO:0042175,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045047,GO:0045048,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051604,GO:0051641,GO:0051649,GO:0061024,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0098827,GO:1901564
Exons4
EggNOG free text desc.phosphate ion transport
EggNOG OGsCOG5065@1,KOG4554@2759
EC3.1.27.1
Cds size711
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842620.41413-CDS-E_fasciculatus_S2_contig9772:317..5181696842620.41413-CDS-E_fasciculatus_S2_contig9772:317..518Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9772 318..518 +
1696842620.427167-CDS-E_fasciculatus_S2_contig9772:841..9971696842620.427167-CDS-E_fasciculatus_S2_contig9772:841..997Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9772 842..997 +
1696842620.4432287-CDS-E_fasciculatus_S2_contig9772:1630..17951696842620.4432287-CDS-E_fasciculatus_S2_contig9772:1630..1795Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9772 1631..1795 +
1696842620.455244-CDS-E_fasciculatus_S2_contig9772:2272..24611696842620.455244-CDS-E_fasciculatus_S2_contig9772:2272..2461Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9772 2273..2461 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9772.17768.1prot_E_fasciculatus_S2_contig9772.17768.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9772 318..2461 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9772.17768.1

>prot_E_fasciculatus_S2_contig9772.17768.1 ID=prot_E_fasciculatus_S2_contig9772.17768.1|Name=mRNA_E_fasciculatus_S2_contig9772.17768.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=237bp
MSATSLFVCFYFARYLIWKKDDDTEIEIPPPAQLKKLVQSAGNAGATVDE
GAPAATTGGAGGAASSLGPMMDKMLTSKMAVKKYDMKTIQGLRRRQFWAS
LMMCYTHLKRGMIKPMMFQVCFGVLSFVDNPLVHIHLLGREAKGNLARPF
KKQGLMESLHGPMEAMAAKVRRDVAAAEAKAAEARAEAESGSATAGGGEE
EEEEEEEEEDDDGGEMPDIEILTNGDESDDVVVESD*
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mRNA from alignment at E_fasciculatus_S2_contig9772:318..2461+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9772.17768.1 ID=mRNA_E_fasciculatus_S2_contig9772.17768.1|Name=mRNA_E_fasciculatus_S2_contig9772.17768.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2144bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9772:318..2461+ (Ectocarpus fasciculatus EfasUO2)
ATGAGCGCAACGTCCCTTTTTGTCTGTTTTTATTTTGCCAGGTACCTCAT
ATGGAAAAAAGATGACGATACCGAGATCGAGATTCCACCTCCCGCGCAGC
TGAAGAAGCTCGTTCAGAGTGCTGGGAATGCTGGCGCAACGGTCGATGAG
GGGGCACCCGCGGCGACGACGGGCGGAGCCGGGGGTGCTGCTTCGTCACT
GGTGTGTGTGCTTTTGAGGGAGAAGAGAGAGGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGGGAGGGAGGGAGAGAGACAGAGAACGAGGCAG
ATGCAGATGCAGAGACAGAGCGGACGAAGAGGATGGTACAGAGACAGAGG
CAAAGAGGCAGAGGTAGAGAGATCGTACATACGTTTATGCCCGTAGTGCC
GTAACAGCAGTTGCTCGGTGTTGGTGGAGCTTGTTTCAGCTGTCGAGTTC
CTCTTCTGTGTCCTGGGTCATGGTTTTTCCCAACACCCAATTTTAATTTC
TCGGTCGGTGCCGCTCGTTCACAGGGACCGATGATGGACAAGATGTTGAC
GTCGAAAATGGCGGTGAAGAAGTACGACATGAAGACCATCCAGGGGCTTC
GCAGGCGGCAGTTCTGGGCGTCCCTGATGATGTGCTACACGCATCTGAAG
AGGGGCATGATCAAGCCCATGATGTTTCAGGTGGGACTAGCCAGCCCCTT
GGTGCGCCTTTTTTTATTTGCCTGCTGCCTACCAGCAGTAGTCATCTACC
TCCTTGATGTGCCCTTTTCAAGCGCCTGCTGCCTGCAGCAATAGCCGTCT
ATCTCCTGGAGCGATGGTGCTTTCTTGGGAACAAGCACGATAGAACACGC
TTGCAGAATGCGTTGGGTGTGTATGTGTATGTGTGTGTGTGTGCTCATAT
GCATGCCGTAGTCGTTAGACCATTGACCTCGCACTCATATGAATGCGTTG
GGGGGGAGGGGGTTAATTTGGGTCTCGTCGCGGTAGTGGCACTTGGGCTG
GCATTTGGCCGGGCTGCTGCTGTTTGTGGTAGAAAGCAACCGTAGTATGG
TGTTGATCCGACGACCGGTTGGTACAGGTCGAGCCCCCATTGAGTACCCA
ACCCCTCGAGACTATCAAGGTTCTTCGAAGACTATCTGTGCAGCATTCCC
GACAGCAGGCGTACAGTCGTCCTCCAGAGGGGCTTACCAAAGGGTTTCAT
CGCGAAGAGGGATTGTTTTCGTTTGATTTGATGCACATTTCACAACTTCT
TGGGGTGGTGCACATTCACGGCTTGTGCGGTCGTCCGTTCGCCCGCCCTC
CTGTCCCGTCCAGGTGTGCTTCGGGGTATTGTCGTTCGTGGATAACCCGC
TCGTCCACATCCACCTTCTTGGCCGGGAAGCCAAGGGTAACCTCGCCAGG
CCGTTCAAGAAGCAGGGGCTGATGGAGAGCCTGCACGGGCCGATGGAAGC
AATGGCTGCTAAGGTGCGACGTGACGTGGTCTGACATGTAATGTCACGCA
ATTCGATGGAAAAGGGGGGAGTGCAGTACGTTTACGTAGGCGCCCTGGTG
TATATTTTGGTGACGGAGAATTTTTCTTCCTCGCCCGTTCGCCTTTGAGG
GGGTAGATGTATGTTTTGTGTTAGCGTGGCGTGCAGTCTCGTGCACTACT
TGCTAACGAGCTACCACATGGCGGAGATTCATGCGTGCATCTAGCTGATG
ATCTCGTCGGCTGCATAGTCTGTCACGATAGGACAGGGAGGCGACGTCCT
AATTTTTTCGGCTGAGTTACTCGTAGATGGAATGGAAGCGCGCCCAAAAT
ACCGTCGCTGTTTTCGAAAATGGAAATGACAGCGTGCCCACAATGTCGTC
GTCGCGTTTTTCGAAGATAGAACGTGCGTTTTCTTGTGGTTTGGTCGTCC
GGGTTCTGATGTTTACGGCCGTTGCTGTCGTGTGCACGCGTGATGCGCTA
ACTAGGCGGCGGCTGAGGCGAAAGCCGCGGAGGCGAGAGCAGAGGCGGAA
TCGGGCAGCGCCACCGCTGGCGGTGGCGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGATGATGACGGGGGAGAGATGCCCGACATCGAGATTTTGA
CCAATGGCGACGAGAGCGACGACGTGGTGGTAGAGAGCGATTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9772:318..2461+

>mRNA_E_fasciculatus_S2_contig9772.17768.1 ID=mRNA_E_fasciculatus_S2_contig9772.17768.1|Name=mRNA_E_fasciculatus_S2_contig9772.17768.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=711bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9772:318..2461+ (Ectocarpus fasciculatus EfasUO2)
ATGAGCGCAACGTCCCTTTTTGTCTGTTTTTATTTTGCCAGGTACCTCAT
ATGGAAAAAAGATGACGATACCGAGATCGAGATTCCACCTCCCGCGCAGC
TGAAGAAGCTCGTTCAGAGTGCTGGGAATGCTGGCGCAACGGTCGATGAG
GGGGCACCCGCGGCGACGACGGGCGGAGCCGGGGGTGCTGCTTCGTCACT
GGGACCGATGATGGACAAGATGTTGACGTCGAAAATGGCGGTGAAGAAGT
ACGACATGAAGACCATCCAGGGGCTTCGCAGGCGGCAGTTCTGGGCGTCC
CTGATGATGTGCTACACGCATCTGAAGAGGGGCATGATCAAGCCCATGAT
GTTTCAGGTGTGCTTCGGGGTATTGTCGTTCGTGGATAACCCGCTCGTCC
ACATCCACCTTCTTGGCCGGGAAGCCAAGGGTAACCTCGCCAGGCCGTTC
AAGAAGCAGGGGCTGATGGAGAGCCTGCACGGGCCGATGGAAGCAATGGC
TGCTAAGGTGCGACGTGACGTGGCGGCGGCTGAGGCGAAAGCCGCGGAGG
CGAGAGCAGAGGCGGAATCGGGCAGCGCCACCGCTGGCGGTGGCGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGATGATGACGGGGGAGAGATGCC
CGACATCGAGATTTTGACCAATGGCGACGAGAGCGACGACGTGGTGGTAG
AGAGCGATTGA
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