mRNA_E_fasciculatus_S2_contig9753.17747.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9753.17747.1
Unique NamemRNA_E_fasciculatus_S2_contig9753.17747.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9753.17747.1 vs.
Match: Protein (transport protein SEC23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCK6_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 6.700e-106
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 1 
Query:    1 MDVWDVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLAYDPIRCNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENISESNLPYELIPQFTTVEYELTTPPHGPPAFVFCVDTCISEDELDELKDSLQQARGLL 468
            M+VWDVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLAYDPIRCNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENISESNLPYELIPQFTTVEYELTTPPHGPPAFVFC+DTC+SEDELDELKDSLQQ   LL
Sbjct:    1 MEVWDVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLAYDPIRCNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENISESNLPYELIPQFTTVEYELTTPPHGPPAFVFCIDTCVSEDELDELKDSLQQTLSLL 156
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9753.17747.1 vs.
Match: Protein (transport protein SEC23 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1K9_9STRA)

HSP 1 Score: 264 bits (674), Expect = 2.150e-87
Identity = 124/157 (78.98%), Postives = 134/157 (85.35%), Query Frame = 1 
Query:    1 MDVWDVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLAYDPIRCNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENISESNLPYELIPQFTTVEYEL-TTPPHGPPAFVFCVDTCISEDELDELKDSLQQARGLL 468
            M+ WD   AEERD  RFSWNVWPSSRLEATRIVVPVGCLYTP+K   + PPPLAYDPIRCNGCGAILNPY Q+DFM+KLW CPFCMQRNHF PHYAENISE+NLP ELIPQFTTVEYEL ++P  GPP FVF VDTC+ +DELDELKDSLQQ   LL
Sbjct:    1 MEGWDWGAAEERDGARFSWNVWPSSRLEATRIVVPVGCLYTPLKRLENMPPPLAYDPIRCNGCGAILNPYCQIDFMTKLWCCPFCMQRNHFLPHYAENISETNLPAELIPQFTTVEYELQSSPVAGPPVFVFVVDTCLHDDELDELKDSLQQLLNLL 157
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9753.17747.1 vs.
Match: Protein (transport protein SEC23 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7Q8_HETAK)

HSP 1 Score: 259 bits (663), Expect = 4.240e-86
Identity = 119/157 (75.80%), Postives = 131/157 (83.44%), Query Frame = 1 
Query:    1 MDVWDVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLAYDPIRCNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENISESNLPYELIPQFTTVEYELTTPP-HGPPAFVFCVDTCISEDELDELKDSLQQARGLL 468
            M+ WDV  AEERD  RFSWNVWPSS+LEATRIVVP+GCLYTP+K     PP LAYDPIRCNGCG ILNP+ Q+DF +KLW CPFC QRNHFPPHYAENISE+NLP ELIPQFTT+EYEL T P  GPP F+F VDTC+ EDELDELKDSLQQ+  LL
Sbjct:    1 MEGWDVHAAEERDGARFSWNVWPSSKLEATRIVVPLGCLYTPLKKIEGMPPALAYDPIRCNGCGGILNPFCQIDFRTKLWVCPFCQQRNHFPPHYAENISETNLPAELIPQFTTIEYELQTAPMSGPPVFLFVVDTCLPEDELDELKDSLQQSLNLL 157
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9753.17747.1 vs.
Match: Protein (transport protein SEC23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT42_9STRA)

HSP 1 Score: 265 bits (677), Expect = 1.240e-81
Identity = 120/153 (78.43%), Postives = 131/153 (85.62%), Query Frame = 1 
Query:   10 WDVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLAYDPIRCNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENISESNLPYELIPQFTTVEYELTTPPHGPPAFVFCVDTCISEDELDELKDSLQQARGLL 468
            WD+ G EERD VRFSWNVWPSS+LEATRIVVP GCLY+P+K     PP LAYDPIRCNGCGAILNPYAQ+D+ SKLW CPFCM RNHFPPHYAENISE+NLP ELIPQFTTVEYELT P  GPPAF+F VDTC+ E+ELD+LKDSLQQ   LL
Sbjct:   10 WDLQGNEERDGVRFSWNVWPSSKLEATRIVVPTGCLYSPLKRLEGMPPALAYDPIRCNGCGAILNPYAQIDYRSKLWACPFCMNRNHFPPHYAENISETNLPAELIPQFTTVEYELTAPSQGPPAFLFLVDTCMLEEELDQLKDSLQQTLNLL 162
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9753.17747.1 vs.
Match: Protein (transport protein SEC23 (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKU0_9STRA)

HSP 1 Score: 242 bits (618), Expect = 1.030e-79
Identity = 110/153 (71.90%), Postives = 125/153 (81.70%), Query Frame = 1 
Query:   10 WDVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLAYDPIRCNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENISESNLPYELIPQFTTVEYELTTPPHGPPAFVFCVDTCISEDELDELKDSLQQARGLL 468
            WD  G E+RD +R SWN WPSSR+EATRIVVP+GCLY+P+K   + P  LAYDPIRCNGC A+LNPY QVDF +KLWTCPFC  RNHFPPHYAENISE++LP ELIPQFTTVEYEL + P GPPAF+F VDTCI EDEL  L+D+LQQ   LL
Sbjct:    5 WDFHGPEQRDGIRNSWNTWPSSRIEATRIVVPLGCLYSPLKRIENMPGSLAYDPIRCNGCTAVLNPYVQVDFRTKLWTCPFCTGRNHFPPHYAENISEASLPAELIPQFTTVEYELQSQPVGPPAFMFVVDTCIDEDELTHLRDALQQTLNLL 157
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9753.17747.1 vs.
Match: Protein (transport protein SEC23 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YQE8_9STRA)

HSP 1 Score: 243 bits (620), Expect = 2.250e-73
Identity = 108/155 (69.68%), Postives = 126/155 (81.29%), Query Frame = 1 
Query:   10 WDVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPP--LAYDPIRCNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENISESNLPYELIPQFTTVEYELTTPPHGPPAFVFCVDTCISEDELDELKDSLQQARGLL 468
            WDVL  EERD  R SWNVWPSSRLEATRIVVPVGCLYTP+K     PP   L YDPIRCN CGA+LNPY Q+DF +KLW+CPFC++RNHFPP YAEN++E+NLP ELIPQ+TT+EYEL + PH PP F+  VDTC+ E+E+DELKDSLQQ   L+
Sbjct:   16 WDVLAMEERDGARLSWNVWPSSRLEATRIVVPVGCLYTPLKRLGSMPPTGALPYDPIRCNNCGAVLNPYCQIDFRTKLWSCPFCLKRNHFPPLYAENMTETNLPAELIPQYTTIEYELQSAPHSPPVFLLLVDTCVDEEEMDELKDSLQQTLNLI 170
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9753.17747.1 vs.
Match: Protein (transport protein SEC23 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W7G0_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.370e-72
Identity = 111/153 (72.55%), Postives = 125/153 (81.70%), Query Frame = 1 
Query:   13 DVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLAYDPIRCNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENISESNLPYELIPQFTTVEYELTTP-PHGPPAFVFCVDTCISEDELDELKDSLQQARGLL 468
            DV   EERD  R SWN+WPS+RLEATRIVVPVGC+YTP+K   + P  L YDPIRC+GCG+ LNPY QVDF +KLW CPFC+ RNHFPPHYAENISESNLP ELI QFTTVEYEL T  PHGPP F+FCVDTC+ E+E+DELKDSLQQ   L+
Sbjct:    8 DVYAGEERDGARLSWNLWPSNRLEATRIVVPVGCMYTPLKKWSNMPI-LPYDPIRCSGCGSTLNPYCQVDFRTKLWVCPFCLTRNHFPPHYAENISESNLPAELISQFTTVEYELQTAVPHGPPIFLFCVDTCVDEEEMDELKDSLQQTLNLI 159
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9753.17747.1 vs.
Match: Protein (transport protein SEC23 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWM5_AURAN)

HSP 1 Score: 240 bits (613), Expect = 2.040e-72
Identity = 110/156 (70.51%), Postives = 126/156 (80.77%), Query Frame = 1 
Query:    1 MDVWDVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLAYDPIRCNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENISESNLPYELIPQFTTVEYELTTPPHGPPAFVFCVDTCISEDELDELKDSLQQARGLL 468
            MD+  +   EERD VR SWNVWPSSRLEATRIV+P+G LYTP+K   + PPPL YDPIRCNGCGA+LNPY QVD+ +KLWTCPFC+ RNHFPPHYAENI+E+NLP ELIPQFTTVEYEL     GPP F+F +DTC+ E ELD LKDS+QQ   LL
Sbjct:    1 MDISSIQAQEERDGVRLSWNVWPSSRLEATRIVIPIGALYTPLKPIGN-PPPLIYDPIRCNGCGALLNPYCQVDYRTKLWTCPFCLGRNHFPPHYAENITETNLPAELIPQFTTVEYELQARGAGPPVFLFVLDTCLPESELDSLKDSIQQTLNLL 155
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9753.17747.1 vs.
Match: Protein (transport protein SEC23 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WHU7_9STRA)

HSP 1 Score: 239 bits (611), Expect = 3.630e-72
Identity = 111/156 (71.15%), Postives = 126/156 (80.77%), Query Frame = 1 
Query:    1 MDVWDVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLAYDPIRCNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENISESNLPYELIPQFTTVEYELTTPPHGPPAFVFCVDTCISEDELDELKDSLQQARGLL 468
            MD+  +   EERD VR SWNVWPSSRLEATRIVVP+G LYTP+K   + PPPL YDPIRCNGCGA+LNPY Q+DF +KLWTCPFC+ RNHFPPHYAENI+E+NLP ELIPQFTTVEYEL     GPP F+F VDTC+ E EL+ LKDS+QQ   LL
Sbjct:    1 MDMSSIQAQEERDGVRLSWNVWPSSRLEATRIVVPIGALYTPLKPIGN-PPPLVYDPIRCNGCGALLNPYCQLDFRTKLWTCPFCLGRNHFPPHYAENITETNLPAELIPQFTTVEYELQQRSVGPPVFLFVVDTCLPESELESLKDSIQQTLNLL 155
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9753.17747.1 vs.
Match: Protein (transport protein SEC23 n=3 Tax=Pythium TaxID=4797 RepID=A0A2D4C7G0_PYTIN)

HSP 1 Score: 231 bits (588), Expect = 2.550e-68
Identity = 103/153 (67.32%), Postives = 117/153 (76.47%), Query Frame = 1 
Query:   10 WDVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLAYDPIRCNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENISESNLPYELIPQFTTVEYELTTPPHGPPAFVFCVDTCISEDELDELKDSLQQARGLL 468
            WD  G E RD VRFSWN WP ++LE TR VVPVGCLYTP+K     PP + YDPI C  C A+LNPY QVDF+SKLW CPFC+ RNHFPPHYAENI++ NLP ELIPQFTT+EYEL     GPP FVFC+DTC+ EDEL+ELKDS+QQ    L
Sbjct:   82 WDFHGMEARDGVRFSWNSWPCTKLEQTRSVVPVGCLYTPLKPIEGIPPAVEYDPIHCKTCMAVLNPYCQVDFVSKLWVCPFCVTRNHFPPHYAENITQENLPAELIPQFTTLEYELQGRQAGPPVFVFCIDTCVPEDELEELKDSIQQTLNQL 234
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9753.17747.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Protein6.700e-10696.15transport protein SEC23 n=2 Tax=Ectocarpus TaxID=2... [more]
Protein2.150e-8778.98transport protein SEC23 (Fragment) n=1 Tax=Fibroca... [more]
Protein4.240e-8675.80transport protein SEC23 (Fragment) n=1 Tax=Heteros... [more]
Protein1.240e-8178.43transport protein SEC23 n=1 Tax=Tribonema minus Ta... [more]
Protein1.030e-7971.90transport protein SEC23 (Fragment) n=1 Tax=Spumell... [more]
Protein2.250e-7369.68transport protein SEC23 n=1 Tax=Dictyocha speculum... [more]
Protein1.370e-7272.55transport protein SEC23 n=1 Tax=Rhizochromulina ma... [more]
Protein2.040e-7270.51transport protein SEC23 n=1 Tax=Aureococcus anopha... [more]
Protein3.630e-7271.15transport protein SEC23 n=1 Tax=Pelagomonas calceo... [more]
Protein2.550e-6867.32transport protein SEC23 n=3 Tax=Pythium TaxID=4797... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9753contigE_fasciculatus_S2_contig9753:279..2298 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score330.5
Seed ortholog evalue4.3e-88
Seed eggNOG ortholog2880.D8LCK6
Preferred nameSEC23A
Model size468
KEGG koko:K14006
KEGG Pathwayko04141,map04141
KEGG ModuleM00404
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0001501,GO:0002164,GO:0002165,GO:0002168,GO:0002376,GO:0002474,GO:0002478,GO:0002495,GO:0002504,GO:0003002,GO:0003330,GO:0003331,GO:0003400,GO:0003674,GO:0005096,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005795,GO:0005798,GO:0005829,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006914,GO:0006950,GO:0006996,GO:0007029,GO:0007030,GO:0007163,GO:0007275,GO:0007389,GO:0007399,GO:0007424,GO:0007517,GO:0007591,GO:0008047,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0008360,GO:0008363,GO:0009056,GO:0009057,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009887,GO:0009888,GO:0009987,GO:0010033,GO:0010243,GO:0010256,GO:0010498,GO:0010720,GO:0010769,GO:0010770,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016203,GO:0016236,GO:0019538,GO:0019882,GO:0019884,GO:0019886,GO:0019898,GO:0019941,GO:0022008,GO:0022407,GO:0022409,GO:0022603,GO:0022604,GO:0022607,GO:0030011,GO:0030117,GO:0030120,GO:0030127,GO:0030133,GO:0030134,GO:0030135,GO:0030154,GO:0030155,GO:0030163,GO:0030198,GO:0030234,GO:0030433,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0030695,GO:0031090,GO:0031344,GO:0031346,GO:0031410,GO:0031982,GO:0031984,GO:0032386,GO:0032501,GO:0032502,GO:0032879,GO:0032991,GO:0033036,GO:0033043,GO:0033333,GO:0033334,GO:0033339,GO:0033554,GO:0034394,GO:0034613,GO:0034622,GO:0034976,GO:0035017,GO:0035107,GO:0035138,GO:0035148,GO:0035149,GO:0035152,GO:0035239,GO:0035293,GO:0035295,GO:0035459,GO:0036503,GO:0040003,GO:0042175,GO:0042221,GO:0042303,GO:0042335,GO:0042337,GO:0042886,GO:0043009,GO:0043062,GO:0043085,GO:0043087,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043547,GO:0043632,GO:0043933,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045785,GO:0046872,GO:0046907,GO:0046914,GO:0048002,GO:0048070,GO:0048079,GO:0048081,GO:0048087,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048209,GO:0048471,GO:0048475,GO:0048513,GO:0048518,GO:0048522,GO:0048562,GO:0048568,GO:0048598,GO:0048646,GO:0048699,GO:0048701,GO:0048702,GO:0048704,GO:0048705,GO:0048706,GO:0048731,GO:0048736,GO:0048814,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050773,GO:0050775,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051216,GO:0051234,GO:0051239,GO:0051240,GO:0051336,GO:0051345,GO:0051603,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051668,GO:0051716,GO:0051960,GO:0051962,GO:0060284,GO:0060341,GO:0060538,GO:0060541,GO:0060589,GO:0060627,GO:0060628,GO:0061024,GO:0061061,GO:0061448,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070727,GO:0070971,GO:0071702,GO:0071704,GO:0071705,GO:0071711,GO:0071840,GO:0072657,GO:0072659,GO:0090110,GO:0090113,GO:0090114,GO:0097708,GO:0098588,GO:0098772,GO:0098791,GO:0098796,GO:0098805,GO:0098827,GO:0120035,GO:1900006,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1903053,GO:1903055,GO:1903530,GO:1903532,GO:1904888,GO:1990778,GO:2000026
Exons2
EggNOG free text desc.COPII-coated vesicle budding
EggNOG OGsCOG5047@1,KOG1986@2759
Cds size468
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842619.039414-CDS-E_fasciculatus_S2_contig9753:278..5301696842619.039414-CDS-E_fasciculatus_S2_contig9753:278..530Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9753 279..530 -
1696842619.057174-CDS-E_fasciculatus_S2_contig9753:2082..22981696842619.057174-CDS-E_fasciculatus_S2_contig9753:2082..2298Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9753 2083..2298 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9753.17747.1prot_E_fasciculatus_S2_contig9753.17747.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9753 279..2298 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9753.17747.1

>prot_E_fasciculatus_S2_contig9753.17747.1 ID=prot_E_fasciculatus_S2_contig9753.17747.1|Name=mRNA_E_fasciculatus_S2_contig9753.17747.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=156bp
MDVWDVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAP
PPLAYDPIRCNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENIS
ESNLPYELIPQFTTVEYELTTPPHGPPAFVFCVDTCISEDELDELKDSLQ
QARGLL
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mRNA from alignment at E_fasciculatus_S2_contig9753:279..2298-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9753.17747.1 ID=mRNA_E_fasciculatus_S2_contig9753.17747.1|Name=mRNA_E_fasciculatus_S2_contig9753.17747.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2020bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9753:279..2298- (Ectocarpus fasciculatus EfasUO2)
ATGGACGTCTGGGATGTGCTGGGAGCGGAGGAGCGCGATGCGGTGCGTTT
TTCGTGGAACGTCTGGCCCAGCTCCCGCCTGGAGGCCACGCGGATAGTGG
TACCCGTCGGGTGCCTCTACACCCCCATGAAGAGCAGGCACGACGCGCCC
CCGCCTCTGGCGTACGACCCCATCCGCTGCAACGGCTGCGGGGCGATCCT
GAACCCTTACGCCCAGGTGTGAGCAGAGTTGGTTGGATGTGTTCCTGTAG
AATTGCTTTTCCACGTCGTCGTCGAGACACCGGAGCATTCCGGCCCCCTT
TGGGCACAGAAGTGTTTTCACTCTTGCGTGTTTTAGTCGAGTTAGGATAA
AGTGGATTGTGTCGTGCGTGTGTGCAGACTGTCGGCCAAACGAAGGTGCC
GTAAGAGGCGGAGAGATGCCCCCCCCCCCCCCCCCCCCCCCCACCCCATT
TATTAAACCTGTTCTCCCCCCCCCACACAGAGCCCACAAACGGGGGCGGG
GGAGAACGAGGAGCACTGAGCACGAGNNNNNNNNNNGCGCCCCAGAAAAG
GGGGGGAAGAGGGGGGGGGGCCCCCCCCCCCCCCCCCCCCCTAGACCGAT
TTGTCAAAGCTCCATTGCCCGCCCTACAGCAGTGCAACCAAGTGGGGTGC
GGAATGAGCCCGACACGTTTACGGAAAGCCCTCGACGAGATGTTCCGGCA
ACCTATGTACGTTTTTTTGTGTGTGTATGTGTGTGCTGGCGCAAGCTTGG
TTGTGAAGCAATCGAACGTTGAAACCCTGTCCCGGGAGGATGGATGCCCT
CTCCCTCTCCGCCTGAACCGGTACATACAGCACTTTGGTCTTTGGTCCAC
AGAAAAAAACGTGGTTGTTGTTCGTTGGTTTCGATGACGTTTCCTCTCTC
TCTCGAGACCAGCTGTTTAGGCTATCCCGCCACTTTGAATAGCTAGTGTG
CACGCCGCAACTTTGGGCAACGCGGTTGTGGTGAGTGTGGTTCGTAATCA
TCCAAGGTTTGTCGGGACGTGTTTATGTATGCAGCGTACGTGATTTTCAA
AGGGAGTTGTGCAGCAGGGTAAGCTAGCAGTCTAGCCGTGGGGTGTGGAA
CTGCTGTTGGTTTGCCTACAGCTTTGGTCCCGGCCTGATCGATCCCTCTC
GAAAACTTTGAAGTGATCCCGTGGGAGAGCTTCGGCCTTGACACGATGAT
CGCCAGAGCAGTCTTGGCCCGACCGGTGGGTACCACCCCTTGGATCGCAC
CACGACGACTTGTCATTCCCAATTTCTCCGGGACGAAAGGATGGGGACGG
AGCGAACCCCGACTGCGGTGCCCCCCTGTTGAAGAAGCTCTCTGACACAT
GATGTTGCCAAGAATGTTCTTTGCGGTCGTTGTAATAGCCCCCGGCGTTA
TTTTCTGGAGACAGACGTAATGTAATGTACAACGGATTCCACAAAAAGTC
GCTCCTGTGAAGAACGGCTAGCTACGTACAAGGTAGCTCGGCGAACGAAT
GACCTCGTGGCAGGGCGCGGTGCGATTCACCGTTTTTTGTTTTTTGCCTA
CATATTCCATATGTTGATGGGTTTTTTTGCGGGGGGTGTGTGCGGTTGCT
TTCATTTTCTCCGGTCAGTGGTTCGGAATATGTGCATAGCATGGTGGTTC
CCCGTACCCATGCACTATAATAGCTTGTGTGTACGACGCTGCCTCTCAAC
ACCCGTCACCTAGTTACGCTTCGCCACACCTATCCCTCTCTCGCGTTGTG
CGTGACAATCAACAACAGGTTGACTTTATGAGCAAGCTGTGGACCTGCCC
CTTCTGCATGCAGAGGAACCACTTCCCTCCCCACTACGCGGAGAACATCA
GCGAGAGCAACCTCCCGTACGAGCTGATCCCGCAGTTCACCACCGTGGAG
TACGAGCTCACCACCCCGCCGCACGGACCCCCCGCGTTCGTGTTCTGCGT
CGACACCTGCATCTCGGAGGACGAGCTGGATGAGCTGAAGGACTCTCTCC
AGCAGGCGCGCGGTTTGTTG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9753:279..2298-

>mRNA_E_fasciculatus_S2_contig9753.17747.1 ID=mRNA_E_fasciculatus_S2_contig9753.17747.1|Name=mRNA_E_fasciculatus_S2_contig9753.17747.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=468bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9753:279..2298- (Ectocarpus fasciculatus EfasUO2)
ATGGACGTCTGGGATGTGCTGGGAGCGGAGGAGCGCGATGCGGTGCGTTT
TTCGTGGAACGTCTGGCCCAGCTCCCGCCTGGAGGCCACGCGGATAGTGG
TACCCGTCGGGTGCCTCTACACCCCCATGAAGAGCAGGCACGACGCGCCC
CCGCCTCTGGCGTACGACCCCATCCGCTGCAACGGCTGCGGGGCGATCCT
GAACCCTTACGCCCAGGTTGACTTTATGAGCAAGCTGTGGACCTGCCCCT
TCTGCATGCAGAGGAACCACTTCCCTCCCCACTACGCGGAGAACATCAGC
GAGAGCAACCTCCCGTACGAGCTGATCCCGCAGTTCACCACCGTGGAGTA
CGAGCTCACCACCCCGCCGCACGGACCCCCCGCGTTCGTGTTCTGCGTCG
ACACCTGCATCTCGGAGGACGAGCTGGATGAGCTGAAGGACTCTCTCCAG
CAGGCGCGCGGTTTGTTG
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