mRNA_E_fasciculatus_S2_contig9695.17696.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9695.17696.1
Unique NamemRNA_E_fasciculatus_S2_contig9695.17696.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9695.17696.1 vs.
Match: Flavoprotein (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV88_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.260e-73
Identity = 109/175 (62.29%), Postives = 137/175 (78.29%), Query Frame = 2 
Query:   47 RPRILLCVSGSVAVVKVPQIAAMLAEFAEVKILVTEASKHFMDRSEAYNSDAHAAFSALDPPIPVLGDADEWGAWDAVGDPVLHIQLRDWADMLLVAPLSANTLAKLANGLCDNLVTCVARAWDFKTKKSFVVAPAMNTHMWEHPMTNRHVSALKELGVAVVPPASKKLACGDIG 571
            RPRILL  +GSVA VK+P++A +L EFA+VKI+VT+AS+ F+D +  Y+  ++ A+SAL+PP+ VL D  EWG W  VGDPV H+QLR+WAD+LL+APLSANTL KLANGLCDNL+TCVARAWD    K  +VAPAMNTHMW HP+T RH+++L  LGV  + P  K LACGD G
Sbjct:   13 RPRILLGATGSVATVKIPRLALLLQEFADVKIIVTKASRAFLDCARDYDRPSYDAWSALEPPMEVLADEGEWGMWSKVGDPVQHVQLREWADLLLIAPLSANTLGKLANGLCDNLLTCVARAWD--VTKPLIVAPAMNTHMWSHPLTARHLASLGVLGVTTISPVVKTLACGDTG 185
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BLAST of mRNA_E_fasciculatus_S2_contig9695.17696.1 vs.
Match: Flavoprotein (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBB5_GLOUD)

HSP 1 Score: 219 bits (559), Expect = 7.110e-70
Identity = 106/175 (60.57%), Postives = 132/175 (75.43%), Query Frame = 2 
Query:   47 RPRILLCVSGSVAVVKVPQIAAMLAEFAEVKILVTEASKHFMDRSEAYNSDAHAAFSALDPPIPVLGDADEWGAWDAVGDPVLHIQLRDWADMLLVAPLSANTLAKLANGLCDNLVTCVARAWDFKTKKSFVVAPAMNTHMWEHPMTNRHVSALKELGVAVVPPASKKLACGDIG 571
            +PRILLC SGSVA VKVP++A  LAEFAEVK++VT+A   F+ +   YN  A  AF+A   PI V+ D  EW AW  VGD VLHI+L+DWAD+LL+AP+SANTLAK+ANGL DNL+TC+ARAW+   +KSFV APAMNT MW+HP+T RH+  L E G  ++PP  K LACG +G
Sbjct:   11 KPRILLCASGSVATVKVPELALKLAEFAEVKLVVTKAGDFFLQKVSEYNPSAWGAFTARAEPIEVIRDEHEWDAWRVVGDSVLHIELKDWADVLLLAPMSANTLAKIANGLSDNLLTCIARAWN--VRKSFVYAPAMNTDMWDHPVTARHLRTLGEFGYEMIPPVEKMLACGVVG 183
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9695.17696.1 vs.
Match: Flavoprotein (domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJ52_AURAN)

HSP 1 Score: 221 bits (562), Expect = 1.070e-67
Identity = 108/175 (61.71%), Postives = 139/175 (79.43%), Query Frame = 2 
Query:   47 RPRILLCVSGSVAVVKVPQIAAMLAEFAEVKILVTEASKHFMDRSEAYNSDAHAAFSALDPPIPVLGDADEWGAWDAVGDPVLHIQLRDWADMLLVAPLSANTLAKLANGLCDNLVTCVARAWDFKTKKSFVVAPAMNTHMWEHPMTNRHVSALKELGVAVVPPASKKLACGDIG 571
            RPR+LL  +GSVA VKVP++A  L+E A+V+++VTE +K F+ ++EAY++ A A F A    I VL DADEW AW  +GD V+H++LR WAD+L++APLSAN+LAKLANGLCD+L++C ARAWDF   K FVVAPAMNT MW HP+T  H++ L+ LGVA VPPASKKLACGD+G
Sbjct:  208 RPRVLLGATGSVATVKVPKLALALSEVADVRVVVTEKAKTFLAKAEAYDAAAWATFQASG--IEVLSDADEWDAWQEIGDDVVHVELRKWADLLVIAPLSANSLAKLANGLCDDLLSCTARAWDFD--KPFVVAPAMNTAMWTHPLTATHLADLRVLGVAAVPPASKKLACGDVG 378
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BLAST of mRNA_E_fasciculatus_S2_contig9695.17696.1 vs.
Match: Flavoprotein (domain-containing protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GS25_9STRA)

HSP 1 Score: 217 bits (552), Expect = 5.970e-67
Identity = 103/175 (58.86%), Postives = 133/175 (76.00%), Query Frame = 2 
Query:   47 RPRILLCVSGSVAVVKVPQIAAMLAEFAEVKILVTEASKHFMDRSEAYNSDAHAAFSALDPPIPVLGDADEWGAWDAVGDPVLHIQLRDWADMLLVAPLSANTLAKLANGLCDNLVTCVARAWDFKTKKSFVVAPAMNTHMWEHPMTNRHVSALKELGVAVVPPASKKLACGDIG 571
            RPR+LL  SGSVA VKVP +A  LA  A+V+++VT+A++ F+D++  Y+ +AHAAF AL   +P+L D DEW AW ++GDPVLHI LRDWAD++ +APLSANT+AKLA GLCDNLVTCVARAW   T K  +VAPAMNT M+ HP T  H+  L+  G ++V P SK LACG++G
Sbjct:  135 RPRVLLAASGSVATVKVPALAVQLAAVADVRVVVTKAAQFFLDKAATYDPEAHAAFIALS--LPILRDDDEWNAWSSLGDPVLHIHLRDWADVMCIAPLSANTMAKLAGGLCDNLVTCVARAWS--TAKPLIVAPAMNTQMYAHPATESHLHLLRSFGYSIVSPVSKTLACGEVG 305
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BLAST of mRNA_E_fasciculatus_S2_contig9695.17696.1 vs.
Match: Flavoprotein (domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQ70_9STRA)

HSP 1 Score: 216 bits (549), Expect = 2.310e-66
Identity = 106/180 (58.89%), Postives = 136/180 (75.56%), Query Frame = 2 
Query:   32 AEGRTRPRILLCVSGSVAVVKVPQIAAMLAEFAEVKILVTEASKHFMDRSEAYNSDAHAAFSALDPPIPVLGDADEWGAWDAVGDPVLHIQLRDWADMLLVAPLSANTLAKLANGLCDNLVTCVARAWDFKTKKSFVVAPAMNTHMWEHPMTNRHVSALKELGVAVVPPASKKLACGDIG 571
            A   +RPR+LL  SGSVA VK+P +A  LA  A+V+ILVT+A+  F+D + AY+  AHAAF AL   +P+L D DEW AW ++GDPVLHIQLRDWAD+L +APLSANT+AKLA+GLCDNL+TCVARAW     K  +VAPAMNT M++H +T+  ++ L+  G  VVPP SK LACG++G
Sbjct:  129 ATKSSRPRVLLAASGSVAAVKIPALAVQLAAVADVRILVTKAATFFLDMAAAYDPVAHAAFDAL--ALPILHDDDEWSAWSSLGDPVLHIQLRDWADVLCIAPLSANTMAKLAHGLCDNLLTCVARAWS--PTKPVIVAPAMNTQMYQHRVTSSQLALLRSFGYTVVPPVSKTLACGEVG 304
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BLAST of mRNA_E_fasciculatus_S2_contig9695.17696.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAH4_PYTOL)

HSP 1 Score: 209 bits (531), Expect = 6.860e-66
Identity = 103/181 (56.91%), Postives = 131/181 (72.38%), Query Frame = 2 
Query:   29 MAEGRTRPRILLCVSGSVAVVKVPQIAAMLAEFAEVKILVTEASKHFMDRSEAYNSDAHAAFSALDPPIPVLGDADEWGAWDAVGDPVLHIQLRDWADMLLVAPLSANTLAKLANGLCDNLVTCVARAWDFKTKKSFVVAPAMNTHMWEHPMTNRHVSALKELGVAVVPPASKKLACGDIG 571
            MA    +PR+L+ VSGSVA VKVP++   LAEFAEVKI+VT+++  F+ R++ Y+      F A+   +PVL DADEW  WD VGDPV+HI+L+DWAD+++V PLSANTLAKLANG+ DNL+T V RAW     K F+ APAMNT MW+HPMT RH+  L EL   ++ P  KKLACG IG
Sbjct:    1 MASSPRKPRVLVGVSGSVATVKVPELTVRLAEFAEVKIVVTKSADFFLQRAKEYHPSHWDKFEAIRESVPVLRDADEWICWDMVGDPVVHIELKDWADLIVVTPLSANTLAKLANGMSDNLLTSVCRAW--MMSKPFLYAPAMNTDMWDHPMTARHLRILDELRYEMIEPVEKKLACGVIG 179
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BLAST of mRNA_E_fasciculatus_S2_contig9695.17696.1 vs.
Match: Flavoprotein (domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CM62_SAPPC)

HSP 1 Score: 209 bits (532), Expect = 8.140e-66
Identity = 99/176 (56.25%), Postives = 133/176 (75.57%), Query Frame = 2 
Query:   47 RPRILLCVSGSVAVVKVPQIAAMLAEFAEVKILVTEASKHFMDRSEAYNSDAHAAFSALDPPIPVLGDADEWGAWDAVGDPVLHIQLRDWADMLLVAPLSANTLAKLANGLCDNLVTCVARAWDFKTKKSFVVAPAMNTHMWEHPMTNRHVSALKE-LGVAVVPPASKKLACGDIG 571
            RPR+L+  SGSVA +KVP++   LAE+AEV++++T+++  F+ ++ AYN    AAF AL+  + +  D DEW AW+ +GDP+LHIQLRDWAD+ +VAPLSAN++AKLANGLCDNL+TCVARAW     K  +VAPAMNT MW HP T +HV+ L++  G  V+PP SK LACG+ G
Sbjct:    6 RPRVLVAASGSVATIKVPELVVKLAEYAEVQVVLTKSANFFLPKAAAYNPTMFAAFEALN--VTIHRDEDEWNAWNVIGDPILHIQLRDWADVCVVAPLSANSMAKLANGLCDNLLTCVARAWS--QSKPLLVAPAMNTQMWAHPCTGKHVTILQDDFGYRVIPPVSKMLACGETG 177
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9695.17696.1 vs.
Match: Flavoprotein (domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D302_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.110e-64
Identity = 104/182 (57.14%), Postives = 136/182 (74.73%), Query Frame = 2 
Query:   35 EGRTRPRILLCVSGSVAVVKVPQIAAMLAEFA--EVKILVTEASKHFMDRSEAYNSDAHAAFSALDPPIPVLGDADEWGAWDAVGDPVLHIQLRDWADMLLVAPLSANTLAKLANGLCDNLVTCVARAWDFKTKKSFVVAPAMNTHMWEHPMTNRHVSALK-ELGVAVVPPASKKLACGDIG 571
              + RPR+LL  +GSVA VK+P++A  L+  A  EVK+ +T+A++HF + ++ YN  A A+F  L   + VL D +EW AW+A+GDPVLHIQLRDWAD+LL+APLSANTL KLA+GLCDNLVT + RAWD K +K  ++APAMNTHMWEHP T + +  L+ +L  AV+PP SK LACGD G
Sbjct:    7 RSQRRPRVLLAATGSVATVKIPELALRLSLVAGAEVKVALTKAARHFWECAKVYNPAAWASFQELGGRVEVLEDKNEWDAWNAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWDVK-RKPVLLAPAMNTHMWEHPFTAQQLRMLQTDLHYAVIPPVSKLLACGDRG 187
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BLAST of mRNA_E_fasciculatus_S2_contig9695.17696.1 vs.
Match: Flavoprotein (domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XST1_9STRA)

HSP 1 Score: 207 bits (527), Expect = 8.460e-64
Identity = 98/180 (54.44%), Postives = 134/180 (74.44%), Query Frame = 2 
Query:   32 AEGRTRPRILLCVSGSVAVVKVPQIAAMLAEFAEVKILVTEASKHFMDRSEAYNSDAHAAFSALDPPIPVLGDADEWGAWDAVGDPVLHIQLRDWADMLLVAPLSANTLAKLANGLCDNLVTCVARAWDFKTKKSFVVAPAMNTHMWEHPMTNRHVSALKELGVAVVPPASKKLACGDIG 571
            A+  TRPRILL  SGSVA VKVP++A  L+  A+V+I++T+A+  F+ ++ AYN D +  F  L   + +L D DEWGAW+++GDPVLHIQLRDWAD+L ++PLSANT+AKLA+GLCDNL+TC+ RAW    +K  +VAPAMNT M+ HP T + +  ++E G  ++PP  K LACG+IG
Sbjct:   87 AKRTTRPRILLAASGSVATVKVPELAVKLSAVADVRIVLTKAATFFLAKASAYNPDMYEQFQTLQ--LEILHDEDEWGAWNSMGDPVLHIQLRDWADILCISPLSANTMAKLAHGLCDNLLTCIVRAWS--CRKPLLVAPAMNTQMYLHPATGKQLGLMREYGYDIIPPVCKTLACGEIG 262
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9695.17696.1 vs.
Match: Phosphopantothenoylcysteine (decarboxylase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RLK1_9CHLO)

HSP 1 Score: 204 bits (520), Expect = 8.730e-64
Identity = 105/179 (58.66%), Postives = 128/179 (71.51%), Query Frame = 2 
Query:   35 EGRTRPRILLCVSGSVAVVKVPQIAAMLAEFAEVKILVTEASKHFMDRSEAYNSDAHAAFSALDPPIPVLGDADEWGAWDAVGDPVLHIQLRDWADMLLVAPLSANTLAKLANGLCDNLVTCVARAWDFKTKKSFVVAPAMNTHMWEHPMTNRHVSALKELGVAVVPPASKKLACGDIG 571
            E   RPRILL VSGSVA +KVP +A +LAE A+V+I+ T+AS+  +   +           AL+  +PV G+ DEW AW  VGDPVLHI+LR WAD LL+APLSANTLAK+A G CDNL+TCV RAWDF   K  +VAPAMNT MW+ P T+RH+  L ELG  V+PP SKKLACGD+G
Sbjct:   20 ECTRRPRILLGVSGSVAAIKVPILAKLLAEVADVQIITTDASRKMLREED---------LCALN--LPVKGNEDEWHAWKEVGDPVLHIELRRWADCLLIAPLSANTLAKVAQGFCDNLLTCVVRAWDFG--KPLLVAPAMNTFMWDSPFTSRHLGTLNELGATVIPPVSKKLACGDVG 185
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9695.17696.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Flavoprotein1.260e-7362.29n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Y... [more]
Flavoprotein7.110e-7060.57domain-containing protein n=1 Tax=Globisporangium ... [more]
Flavoprotein1.070e-6761.71domain-containing protein n=1 Tax=Aureococcus anop... [more]
Flavoprotein5.970e-6758.86domain-containing protein n=11 Tax=Aphanomyces ast... [more]
Flavoprotein2.310e-6658.89domain-containing protein n=2 Tax=Aphanomyces inva... [more]
Uncharacterized6.860e-6656.91protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Flavoprotein8.140e-6656.25domain-containing protein n=2 Tax=Saprolegnia TaxI... [more]
Flavoprotein1.110e-6457.14domain-containing protein n=3 Tax=Monodopsidaceae ... [more]
Flavoprotein8.460e-6454.44domain-containing protein n=1 Tax=Aphanomyces eute... [more]
Phosphopantothenoylcysteine8.730e-6458.66decarboxylase n=1 Tax=Coccomyxa sp. Obi TaxID=2315... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9695contigE_fasciculatus_S2_contig9695:1908..5206 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score221.9
Seed ortholog evalue2.5e-55
Seed eggNOG ortholog44056.XP_009040418.1
Preferred namePPCDC
Model size571
KEGG rclassRC00004,RC00039,RC00219,RC00332,RC00822,RC02725
KEGG koko:K00560,ko:K00652,ko:K01598
KEGG ReactionR02101,R03210,R03269,R10124
KEGG Pathwayko00240,ko00670,ko00770,ko00780,ko01100,ko01523,map00240,map00670,map00770,map00780,map01100,map01523
KEGG ModuleM00053,M00120,M00123,M00573,M00577
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001558,GO:0003674,GO:0003824,GO:0004633,GO:0004799,GO:0004857,GO:0004864,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006220,GO:0006221,GO:0006231,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006950,GO:0006970,GO:0006972,GO:0007346,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009150,GO:0009152,GO:0009157,GO:0009162,GO:0009165,GO:0009176,GO:0009177,GO:0009219,GO:0009221,GO:0009259,GO:0009260,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009628,GO:0009651,GO:0009892,GO:0009966,GO:0009987,GO:0010181,GO:0010563,GO:0010605,GO:0010646,GO:0010921,GO:0010923,GO:0015936,GO:0015937,GO:0016043,GO:0016740,GO:0016741,GO:0016829,GO:0016830,GO:0016831,GO:0017076,GO:0018130,GO:0019208,GO:0019212,GO:0019220,GO:0019222,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0019725,GO:0019888,GO:0022607,GO:0023051,GO:0030003,GO:0030004,GO:0030234,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0032259,GO:0032268,GO:0032269,GO:0032515,GO:0032553,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035303,GO:0035304,GO:0035305,GO:0035308,GO:0036094,GO:0040008,GO:0042083,GO:0042538,GO:0042592,GO:0042802,GO:0043086,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043666,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045936,GO:0046073,GO:0046385,GO:0046390,GO:0046483,GO:0048037,GO:0048519,GO:0048523,GO:0048583,GO:0048878,GO:0050662,GO:0050789,GO:0050790,GO:0050794,GO:0050801,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051174,GO:0051186,GO:0051188,GO:0051246,GO:0051248,GO:0051259,GO:0051260,GO:0051336,GO:0051346,GO:0051726,GO:0055067,GO:0055080,GO:0055082,GO:0055086,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070206,GO:0070207,GO:0071513,GO:0071704,GO:0071840,GO:0072521,GO:0072522,GO:0072527,GO:0072528,GO:0080090,GO:0090407,GO:0097159,GO:0097367,GO:0098771,GO:0098772,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990143
Exons5
EggNOG free text desc.phosphopantothenoylcysteine decarboxylase activity
EggNOG OGsCOG0452@1,KOG0672@2759
Ec32 ortholog descriptionFlavoprotein
Ec32 orthologEc-03_000890.1
EC2.1.1.45,2.3.1.47,4.1.1.36
Cds size543
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9695.17696.1prot_E_fasciculatus_S2_contig9695.17696.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9695 1936..5206 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842614.405472-UTR-E_fasciculatus_S2_contig9695:1907..19351696842614.405472-UTR-E_fasciculatus_S2_contig9695:1907..1935Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9695 1908..1935 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842614.4198303-CDS-E_fasciculatus_S2_contig9695:1935..20401696842614.4198303-CDS-E_fasciculatus_S2_contig9695:1935..2040Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9695 1936..2040 +
1696842614.4334998-CDS-E_fasciculatus_S2_contig9695:3797..39681696842614.4334998-CDS-E_fasciculatus_S2_contig9695:3797..3968Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9695 3798..3968 +
1696842614.4504993-CDS-E_fasciculatus_S2_contig9695:4246..43361696842614.4504993-CDS-E_fasciculatus_S2_contig9695:4246..4336Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9695 4247..4336 +
1696842614.462986-CDS-E_fasciculatus_S2_contig9695:4699..47971696842614.462986-CDS-E_fasciculatus_S2_contig9695:4699..4797Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9695 4700..4797 +
1696842614.475296-CDS-E_fasciculatus_S2_contig9695:5127..52061696842614.475296-CDS-E_fasciculatus_S2_contig9695:5127..5206Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9695 5128..5206 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9695.17696.1

>prot_E_fasciculatus_S2_contig9695.17696.1 ID=prot_E_fasciculatus_S2_contig9695.17696.1|Name=mRNA_E_fasciculatus_S2_contig9695.17696.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=181bp
MAEGRTRPRILLCVSGSVAVVKVPQIAAMLAEFAEVKILVTEASKHFMDR
SEAYNSDAHAAFSALDPPIPVLGDADEWGAWDAVGDPVLHIQLRDWADML
LVAPLSANTLAKLANGLCDNLVTCVARAWDFKTKKSFVVAPAMNTHMWEH
PMTNRHVSALKELGVAVVPPASKKLACGDIG
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mRNA from alignment at E_fasciculatus_S2_contig9695:1908..5206+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9695.17696.1 ID=mRNA_E_fasciculatus_S2_contig9695.17696.1|Name=mRNA_E_fasciculatus_S2_contig9695.17696.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3299bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9695:1908..5206+ (Ectocarpus fasciculatus EfasUO2)
GTGCAGCGGTCCGTGGTCGGTGGTTCCCATGGCTGAAGGGCGCACGAGGC
CGAGAATACTGCTATGTGTCAGTGGGAGCGTTGCTGTGGTGAAGGTCCCA
CAGATTGCGGCAATGCTCGCGGAGTTTGCAGAGGTGAGTATGTGAAATCT
GGCCTTGGCAAGGTTAGAGGAGCACGTTCAACCTGAGTTGAAGGAACTCT
GATACGATGAAGTGCTTGCTTTTAAAGAGGGGTGCATTCGGGCAGTAATC
AGCCGCAATGAAAGCCAAAAGAGAGCCTTAAGACGCCCAGTATATACGTT
CACAAACACAACCTCAAACTATGTACAGAAGGGTACCAAAATGGTGTGGC
ATGTTAGACTACACGTAGTGCATATGAAGCTGCGGAGCGTTTTTTTACCG
TGGACAAGGACGGCGGTGTTTCCTGTGGCACCTCCCTCTCTGTCTTCAGG
TTCGACGTGGGGTCAATAGATATCAGGACGCAGACTATCACATCTCCTAC
CGGCCGACACGACATTCGTATCAAAACGTCATTGATTTGATTCATCGTCT
CATGGTCTGTGGGGTATCAATGAGGTCGAACAAGCACAGCGGACGCACAG
ACCGAGGCTGCCCGGCGCGCCCTGACCCAACAATGATGACTGGAAACATG
TATGTTCTTCGTCAACAGACAGCAGTTACGTTTTCTCTGCTCCAGCAATC
GCAATAAACAAGTTGCCGACGGTTGAAACCAAGAAAAGGGTTTGGTTTCT
ACACATCAATCGATGATTGAGGTCCGACCAAAGAGCAAAACAGGAGGTCA
ATGTCCACCCGATCGAGGTTTCTGGCAGGGGGGACAGACACGCAAAAAAT
GTTTGCTGCATCGTTACAGTGCCAAAAAACGTGCAAGACGGCCAGAGTCG
TCACGCCTACTCCTAAGCCCCTATCTCAAACGACTGAAGACGAGACTACC
GGTCGGTGCTTCGCACGCACAGCATAGGTGGACACTACATGTACTGCCGT
ACTGTAGCAAGCCGACGGCAACACCCAACCTTTTGAGGTCGTTCGCCTCC
TGAAGTGCTACATGATAGTTTCTTCAGTACTCCTGTAGTAGCGATGTGTG
TGCTACCGGTCCTCGGCGCCACTGCCGCTCCATGATTGATTGAGCCCGTC
TGTTTCGTGGGGGGGGGGGTGGTAACAGGAGGATGTCGGATCGATGCACA
CATGCAAATGACACTTGACTTCTGGCACGACGCGCTCTGCCTAGAGCTGG
GTGACCCACCTGACAAATCGCGTGTCTGTTATGGTTTGCGACGGGTGCTT
CAATCGTGCCGTGTCGCCACTGCACGGCGAACAAAGTTGGGTTGGGACCG
GTGGTGCGCAGTGCAGGTGGAGTCTTCAAAGGCACCAGCAACAACACGAT
GAGACACACCCACCTTTCGTTTCATAGATCCAGCGAAATGGTGTCCCTGC
GCATGATTTTTTCATCGTTTCAAGAGCCGCGTAATCATATGTCTTTCGTT
TCATAGATCCAGCGAAATGGTGTCCCTGCGCATGTTTTTTTCATCGTTTC
AAGAGCCGCGTAATCATATGTCTAGGCCAGAACAGCAGCAAAAACAACAA
CAAACTACAACGGCCAAAATATCTACAACAACACAGCTGGCGAGGGAGGT
TCGAAGTTTTACACGACAAATGATTTGTCCACGTCAGACACGCTACACGA
GATCAAGATGTCGGTGTCGAGAAACACAAGGGGCGAAGGCGAGAAAGATC
AGCGTACATTACTTGGTGCTTCTGCTGTCTACAAAACGACCATATCTACT
ATTGATCCCACTCCAGACATGACGACTGAGCCTCTGGCGCTCTTTATGCG
TCTTTCGTTCGAACCTTTCGTTCGAACCTTTCGCTCGAAGGTCAAGATAC
TGGTGACGGAGGCGAGCAAACACTTCATGGACAGGAGCGAGGCCTACAAC
AGCGACGCCCACGCAGCATTCAGCGCGCTCGACCCTCCCATCCCGGTCCT
TGGAGATGCGGACGAATGGGGGGCCTGGGATGCTGTCGGTGACCCCGTGT
TGCACATACAGGTTTGGCTCGGATACGTGTGTGGGAGGAAGGAGGATGTT
GAGATTGGTTGAAGAGCATGTCAGTAACAAGGTCATTGCCTTACGGTATG
GTATGCATACAAACTTTCTTCCTCATAGGGGTAGGTCGTGCTTCGCGTGA
CGTGGCTGACTGCAGTGTTGCGGCCTGTTCTTACCAACAACGGTCTCCCT
ACTGGCTCGCTCTCGTGTTGTCCGTCTGAATGGTGCTTGGTTACCCCCAC
CGGTCCGTGCTACGGCTCTTGATGGCTTGCCCCAAGAAGCTTCGGGATTG
GGCCGACATGTTGCTCGTGGCGCCGCTGTCCGCCAACACCCTGGCCAAGC
TGGCCAACGGCTTGTGCGACAATCTTGTGGTGAGACCATACCCTTCACAA
GGGGGGGTTGGCACACGCCCGACGTTGTGTAGGTGTTCTTCGGCAACGGT
TTCTTCCGGGGCCAGCGTAGAATACGATTCCCCTGCCGCATCTGTTCAGT
GCCAGTAAAAGTTGGGGGCTTCGGAAGAAAGGATGGCTCGAAAGAACACC
GTTGGAACGTTGGAAGCGAGCGGAAGGACGATCTGGATGAAGGGGGCGAT
ACTCGAGGACAACATGGTGGAATTATGAAGACCGCTGTCGTTCGCAGCTA
CCACCCGATTCGTAGCCAATCACCCGAAAATCGCACCCACTATACATCGC
TGATTCAGACCCTCCGTTCGCCGTCCGTTCTTGTGCCGTCAGACCTGCGT
AGCTCGAGCGTGGGATTTTAAGACGAAGAAAAGCTTCGTGGTTGCCCCTG
CCATGAACACGCACATGTGGGAACACCCCATGACGAACCGGTACGTTGAG
CAGGCGAATGAGGCCGTTGTTTTAGTCATTTCTCGTGGATTGGTAGCGAT
CTACGTAGGTTGAACAAATTGAGATTGCCGCAGGAAAATGAAACTGTCGT
TCGGCACGCACCTCTCCGCTTCGGTCCGTGTTTTGTACCCAGAAACAGTA
CCTTCAAGCGTGTCTATTTCAAGTTACGTTTCATGCTTCCAGTCTCTGCT
TGTGTGTGGTCCTGCCGGAGAATATCTCTTCCGTCGACCCGTTCCGTCCA
ATGCCCTCTCAAACTTGACGCGGGCATTGCCCCCCTCAAATTCGTGTCTC
TATTTTCTGTGTGGTGACAGGCATGTATCTGCCTTGAAGGAGCTGGGAGT
GGCAGTCGTGCCACCAGCTTCGAAGAAATTGGCTTGTGGAGATATAGGC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9695:1908..5206+

>mRNA_E_fasciculatus_S2_contig9695.17696.1 ID=mRNA_E_fasciculatus_S2_contig9695.17696.1|Name=mRNA_E_fasciculatus_S2_contig9695.17696.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=543bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9695:1908..5206+ (Ectocarpus fasciculatus EfasUO2)
ATGGCTGAAGGGCGCACGAGGCCGAGAATACTGCTATGTGTCAGTGGGAG
CGTTGCTGTGGTGAAGGTCCCACAGATTGCGGCAATGCTCGCGGAGTTTG
CAGAGGTCAAGATACTGGTGACGGAGGCGAGCAAACACTTCATGGACAGG
AGCGAGGCCTACAACAGCGACGCCCACGCAGCATTCAGCGCGCTCGACCC
TCCCATCCCGGTCCTTGGAGATGCGGACGAATGGGGGGCCTGGGATGCTG
TCGGTGACCCCGTGTTGCACATACAGCTTCGGGATTGGGCCGACATGTTG
CTCGTGGCGCCGCTGTCCGCCAACACCCTGGCCAAGCTGGCCAACGGCTT
GTGCGACAATCTTGTGACCTGCGTAGCTCGAGCGTGGGATTTTAAGACGA
AGAAAAGCTTCGTGGTTGCCCCTGCCATGAACACGCACATGTGGGAACAC
CCCATGACGAACCGGCATGTATCTGCCTTGAAGGAGCTGGGAGTGGCAGT
CGTGCCACCAGCTTCGAAGAAATTGGCTTGTGGAGATATAGGC
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