mRNA_E_fasciculatus_S2_contig9637.17647.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9637.17647.1
Unique NamemRNA_E_fasciculatus_S2_contig9637.17647.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9637.17647.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS4_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 1.630e-143
Identity = 235/246 (95.53%), Postives = 243/246 (98.78%), Query Frame = 1 
Query:    1 DRVLGIEGFKRYNRAEISALVEVQQELSCEDVTNLPLHADEVSIVNGVLLTAEKSVAEAMITMDKVFCLGNHEKLDANTMADIMAAGYSRVLVYDGQDTRNIRGYLQVKKLIVLSPDDERVISTLMLRVPVVVSPKKSLLELLNTFQTGKSHLALVSSSPAITLESLKRGVPLEGAARPMGIITLEDIIEEIIQEEIMDESDRLSQFIEDRAKDTLLRFARRRQERQKVGQINPRLTSFTTPRRVS 738
            DRVLGIEGFKRYNRAEISALVEVQQELSCEDVTNLPLHADEVSIVNGVLLTAEKSVAEAMITMDKVFCLG +EKLDANTMAD+MAAGYSRVLVY+G+DTRNIRGYLQVKKLIVL+PDDERVIS+LMLRVPVVVSPKKSLLELLNTFQTGKSHLALVSSSPAITLESLKRGVPLEGAARPMGIITLEDIIEEIIQEEIMDESDRLSQFIEDRAKDTLLRFARRRQERQ VGQINPRL SFTTPRR++
Sbjct:  349 DRVLGIEGFKRYNRAEISALVEVQQELSCEDVTNLPLHADEVSIVNGVLLTAEKSVAEAMITMDKVFCLGINEKLDANTMADVMAAGYSRVLVYEGEDTRNIRGYLQVKKLIVLNPDDERVISSLMLRVPVVVSPKKSLLELLNTFQTGKSHLALVSSSPAITLESLKRGVPLEGAARPMGIITLEDIIEEIIQEEIMDESDRLSQFIEDRAKDTLLRFARRRQERQSVGQINPRLASFTTPRRLA 594
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9637.17647.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPI7_9PHAE)

HSP 1 Score: 431 bits (1107), Expect = 4.490e-137
Identity = 336/430 (78.14%), Postives = 351/430 (81.63%), Query Frame = 1 
Query:    1 DRVLGIEGFKRYNRAEISALVEVQQELSCEDVTNLPLHADEVSIVNGVLLTAE----KSVAEAMITMDKVFCLGNHEKLDANTMADIMAAGYSRVLVYDGQDTRNIRGYLQVKKLIVLSPDDERVISTLMLRVPVVVSPKKSLLELLNTFQTGKSHLALVSSSPAITLESLKRGVPLEGAARPMGIITLEDIIEEIIQEEIMDESDRLSQFIEDRAKDTLLRFARRRQERQKVGQINPRLTSFTTPRRVSELESEETNLLKHLGAKNGPPSSRGSAPPISPSYQSMEGGNSFG--RSRSNSPTMFSSSSPPAPPGLDERASLLAGSARGSNRQERLGGAKNVKRGSATVGQAMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGADSSETGANGAET 1272
            DRVLGIEGFKRYNRAEISALVEVQQELSCEDVTNLPL ++  S  +   +T      +S     +    V   G        +     AA         G      R   +VKKLIVLSPDDERVIS+LMLRVPVVVSPKKSLLELLNTFQTGKSHLALVSSSPAITLESLKRGVPLEGAARPMGIITLEDIIEEIIQEEIMDESDRLS+FIEDRAKDTLLRFARRRQERQ VGQINPRL SFTTPRR   LE+EET LLKHLGAK+GPPSSRG+APP+SPSYQSMEGGNS G  RSRSNSP MFSSS P A PGLDERASLL GSARGSNRQERL G K+ KRGSATVGQAMIA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LLGADSS TGANGAET
Sbjct:  346 DRVLGIEGFKRYNRAEISALVEVQQELSCEDVTNLPL-SERWSFAHPHCVTRSLGERRSRGCGQLFSAWVSTRGWMRTPWPISWRPATAASSCTRGRTPGTSAAICR---RVKKLIVLSPDDERVISSLMLRVPVVVSPKKSLLELLNTFQTGKSHLALVSSSPAITLESLKRGVPLEGAARPMGIITLEDIIEEIIQEEIMDESDRLSRFIEDRAKDTLLRFARRRQERQSVGQINPRLASFTTPRR---LETEETKLLKHLGAKSGPPSSRGNAPPVSPSYQSMEGGNSCGAPRSRSNSPDMFSSS-PLAAPGLDERASLLTGSARGSNRQERLDGTKSAKRGSATVGQAMIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LLGADSSGTGANGAET 765
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BLAST of mRNA_E_fasciculatus_S2_contig9637.17647.1 vs.
Match: CNNM (transmembrane domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ67_9STRA)

HSP 1 Score: 231 bits (589), Expect = 3.570e-61
Identity = 137/275 (49.82%), Postives = 181/275 (65.82%), Query Frame = 1 
Query:   25 FKRYNRAEISALVEVQQELSCED----VTNLPLHADEVSIVNGVLLTAEKSVAEAMITMDKVFCLGNHEKLDANTMADIMAAGYSRVLVYDGQDTRNIRGYLQ---------------------------------VKKLIVLSPDDERVISTLMLRVPVVVSPKKSLLELLNTFQTGKSHLAL--------------VSSSPAITLESLKRGVPLEGAARPMGIITLEDIIEEIIQEEIMDESDRLSQFIEDRAKDTLLRFARRRQERQKVGQI 696
            +KRY+RAEI+ALVEVQ ELS  D        PLHADEV+IV+GVL  +EK+VA+AM+TMD+V+ +    +LD   MAD++AAGYSRV V++G D RNIRGYLQ                                 VKKLIVL+P D+R + TL+LR P VV P KSLLELLN FQ G++HLA+              VSSSP +T E+L+ G+PLEG ARP+GIIT+EDI EEIIQEEI DESD+ + ++E +AK TLL++ +R+   +++G++
Sbjct:  408 YKRYSRAEIAALVEVQLELSKRDDNPNAFEQPLHADEVAIVHGVLQASEKTVADAMLTMDRVYSISMDVELDDGKMADLLAAGYSRVPVFEGADVRNIRGYLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKKLIVLNPGDKRQVRTLVLRAPEVVGPNKSLLELLNVFQMGRTHLAMXXXXXXXXXXXXXIVSSSPKLTREALRHGLPLEGNARPIGIITMEDIFEEIIQEEIWDESDKPTSYMEAQAKATLLKYTQRKAHYRRIGRL 682
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BLAST of mRNA_E_fasciculatus_S2_contig9637.17647.1 vs.
Match: Protein (mam3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKN6_9STRA)

HSP 1 Score: 171 bits (433), Expect = 5.950e-42
Identity = 100/229 (43.67%), Postives = 135/229 (58.95%), Query Frame = 1 
Query:    1 DRVLGIEGFKRYNRAEISALVEVQQELSCEDVTNLP---------------------------LHADEVSIVNGVLLTAEKSVAEAMITMDKVFCLGNHEKLDANTMADIMAAGYSRVLVYDGQDTRNIRGYLQVKKLIVLSPDDERVISTLMLRVPVVVSPKKSLLELLNTFQTGKSHLALVSSSPAITLESLKRGVPLEGAARPMGIITLEDIIEEIIQEEIMDESD 606
            D+ LG   FKRY R E+S LV++Q+E+        P                           +  DE +IV GVL    K + +A+  MD V+ L   + LD N + +IMA GYSR+ V+  +  ++IRG+L VK+LIVL P D R + TL LR P+VVSP  SLLEL+N FQ G+SH+A+VS  P +T ++L+   PLEG   P+GIITLED+ EEI+QEEI DE D
Sbjct:  161 DKWLGHNSFKRYTREELSTLVDLQREVGVVKHRRPPGSHSGSGXXXGTLKAAKEKELGESMRAITVDEATIVAGVLKCHAKKICDALKPMDVVYTLCEEDILDENKLCEIMACGYSRIPVHSARGRQDIRGFLLVKRLIVLDPADRRPVRTLPLRQPIVVSPTGSLLELINVFQEGRSHMAIVSPCPDLTRQALRSNKPLEGRIAPIGIITLEDLFEEILQEEIYDEHD 389
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BLAST of mRNA_E_fasciculatus_S2_contig9637.17647.1 vs.
Match: Hypothetical (protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FEE5_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.330e-40
Identity = 107/262 (40.84%), Postives = 146/262 (55.73%), Query Frame = 1 
Query:    1 DRVLGIEGFKRYNRAEISALVEVQQEL---------SCED----------------VTNLP---------------------------LHADEVSIVNGVLLTAEKSVAEAMITMDKVFCLGNHEKLDANTMADIMAAGYSRVLVYDGQDTRNIRGYLQVKKLIVLSPDDERVISTLMLRVPVVVSPKKSLLELLNTFQTGKSHLALVSSSPAITLESLKRGVPLEGAARPMGIITLEDIIEEIIQEEIMDESDRLSQFIED 630
            D  LG +  ++Y R EISALV VQ E+         S ED                ++++P                           + +DEV IV GVL TAEK V EAM  + +V+ +G    +D  TM+++M +G+SR+ V    D  ++RG+L VK+LI L PDD R I TL + +P  VSP  SLLE LN FQ G+SH+A VS+ P  T + L RG PL G+ARP+GI+TLEDI+E+IIQEEI DE D + + + D
Sbjct:  158 DVALGHQSLRKYTRNEISALVRVQHEMRKQREALARSSEDGVVVTPVRSRGKGMSRLSSVPEGGGGKLTRGSSMTIHGPSENPHGEQEISSDEVDIVAGVLQTAEKKVYEAMTPISEVYSVGMDRVMDFQTMSEVMGSGFSRIPVSASDDPGDMRGFLLVKRLITLDPDDAREIKTLRVILPACVSPNASLLETLNKFQEGRSHMAFVSAKPQDTRDLLLRGEPLVGSARPIGILTLEDIVEKIIQEEIYDEDDLMIREVHD 419
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BLAST of mRNA_E_fasciculatus_S2_contig9637.17647.1 vs.
Match: Uncharacterized (protein ycf23 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY62_9STRA)

HSP 1 Score: 161 bits (407), Expect = 2.830e-37
Identity = 93/198 (46.97%), Postives = 127/198 (64.14%), Query Frame = 1 
Query:  109 LHADEVSIVNGVLLTAEKSVAEAMITMDKVFCLGNHEKLDANTM-----------------------ADIMAAGYSRVLVYDGQDTRNIRGYLQVKKLIVLSPDDERVISTLMLRVPVVVSPKKSLLELLNTFQTGKSHLALVSSSPAITLESLKRGVPLEGAARPMGIITLEDIIEEIIQEEIMDESDRLSQFIEDR 633
            L  DEV IV GVL  A K+V + ++ M+KVFCL     LDA+ +                       A IM++G+SR+ VY+G D   +RG+L VK+LIVL P   R + +L LR+P+VVSP   L++LLNTFQ G+SHLA+V+  P   LE++K+G  L+G A P+GIITLED+IEEI+QEEI+DE DR  + +E R
Sbjct:  435 LSQDEVDIVVGVLKIASKTVQDCLVPMEKVFCLSTQAALDASMLVGSRGGGREGGIGREGAHKEAGLAMIMSSGFSRIPVYEGSDRSFLRGFLLVKRLIVLEPATRRRVGSLALRLPLVVSPLCPLIDLLNTFQEGRSHLAVVAWDPEAALENIKQGRSLKGDAAPLGIITLEDVIEEILQEEILDEHDRSREELERR 632
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BLAST of mRNA_E_fasciculatus_S2_contig9637.17647.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUF5_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.720e-34
Identity = 83/166 (50.00%), Postives = 112/166 (67.47%), Query Frame = 1 
Query:  109 LHADEVSIVNGVLLTAEKSVAEAMITMDKVFCLGNHEKLDANTMADIMAAGYSRVLVYDGQDTRNIRGYLQVKKLIVLSPDDERVISTLMLRVPVVVSPKKSLLELLNTFQTGKSHLALVSSSPAITLESLKRGVPLEGAARPMGIITLEDIIEEIIQEEIMDESD 606
            LH DEV+I++G L  + K+V E M+ M +VF L    KLD N MA I+A+G+SR+ V+ G  + NI G L VK+LIVL P+DERVI  L LR P+VV+P +S   +LN FQ G+SH+ALV+    + L+  + GV +       GI T+ED+IEE+IQEEI DESD
Sbjct:  247 LHVDEVTIIHGALDLSSKTVTEVMVPMRRVFMLEYSTKLDENRMAGILASGHSRIPVFRGHPS-NIVGLLLVKRLIVLDPEDERVIGDLSLRKPIVVTPDESCYAILNEFQKGRSHIALVTRDAPLVLQCWRDGVDVPPTVEFEGICTIEDVIEELIQEEIEDESD 411
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9637.17647.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RRA6_HETAK)

HSP 1 Score: 141 bits (356), Expect = 4.070e-34
Identity = 84/200 (42.00%), Postives = 127/200 (63.50%), Query Frame = 1 
Query:  109 LHADEVSIVNGVLLTAEKSVAEAMITMDKVFCLG-NHEKLDANTMADIMAAGYSRVLVYDGQDTRNIRGYLQVKKLIVLSPDDERVISTLMLRVPVVVSPKKSLLELLNTFQTGKSHLALVSSSPAITLESLKRGVP-------LEGAARPMGIITLEDIIEEIIQEEIMDESDRLSQFIEDRAKDTLLRFARRRQERQK 684
            L  DEV I+ G +   + +V + M+ MD V+ +     +L+ +TMADIM+ G+SRV+V+ G D   + GYL VK LIVL P+  R I    L+ P+  SPK S+L LLN FQ GKSH+A+VS +P IT   +++ +        L GAARP+GI+T ED+IE IIQEE++DE++      E +A + + R+ +R+ E+++
Sbjct:   21 LSEDEVDIMTGAIKAMKTTVKDIMVHMDNVYSVPFESTELNYDTMADIMSKGFSRVIVHKGDDPTKVVGYLLVKNLIVLDPEAARPIEKEWLKTPIFCSPKDSVLSLLNAFQGGKSHMAIVSHAPRITEIEIQKALAAHDPHPALRGAARPLGIVTFEDVIETIIQEEVVDETN----VQEKKANNIMRRYIQRQLEKKR 216
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9637.17647.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIZ2_PYTOL)

HSP 1 Score: 148 bits (374), Expect = 1.050e-33
Identity = 82/185 (44.32%), Postives = 123/185 (66.49%), Query Frame = 1 
Query:   52 SALVEVQQELSCEDVTNLPLHADEVSIVNGVLLTAEKSVAEAMITMDKVFCLGNHEKLDANTMADIMAAGYSRVLVYDGQDTRNIRGYLQVKKLIVLSPDDERVISTLMLRVPVVVSPKKSLLELLNTFQTGKSHLALVSSSPAITLESLKRGVPLEGAARPMGIITLEDIIEEIIQEEIMDESD 606
            S++ E+ +E S +      LH DEV+I++G L  + K+++E MI + +VF L    KLD N MADI+A+G+SR+ +Y    + N+ G L VK+LIV+ P+DER +  L LR P+VV+P++S   +LN FQ G+SH+ALV+    + +E     +P+      +GIIT+ED+IEE+IQEEI DESD
Sbjct:  408 SSVSELTREHSAQGTR---LHVDEVTIIHGALDLSSKNISEVMIPISQVFMLEFETKLDENVMADILASGHSRIPIYKDYPS-NVVGLLLVKRLIVVDPEDERPVRDLSLRKPIVVTPEESCYHILNEFQKGRSHIALVTKDAKLVMECWANDLPIPPTVNFVGIITIEDVIEELIQEEIEDESD 588
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9637.17647.1 vs.
Match: CNNM (transmembrane domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A8J4S903_9STRA)

HSP 1 Score: 145 bits (367), Expect = 4.910e-33
Identity = 84/170 (49.41%), Postives = 112/170 (65.88%), Query Frame = 1 
Query:   97 TNLPLHADEVSIVNGVLLTAEKSVAEAMITMDKVFCLGNHEKLDANTMADIMAAGYSRVLVYDGQDTRNIRGYLQVKKLIVLSPDDERVISTLMLRVPVVVSPKKSLLELLNTFQTGKSHLALVSSSPAITLESLKRGVPLEGAARPMGIITLEDIIEEIIQEEIMDESD 606
            T   L+ DEV+I++G L  + K+V E MI M +VF L    KLD NTMADI+A+G+SR+ VY+ + + NI G L VKKLIVL PDD R I  L+LR P++VSP  S   +LN FQ G+SH+ALV+  P +     +    +       GI+T+ED+IEE+IQEEI DESD
Sbjct:  260 TGTRLNVDEVTIIHGALDLSSKTVTEVMIAMSEVFMLEIDTKLDRNTMADILASGHSRIPVYETRKS-NIAGLLLVKKLIVLDPDDARPIRDLVLRKPILVSPSGSCYSMLNEFQKGRSHIALVTKDPDLVSNCWRNNQFIPPHVVFEGIVTIEDVIEELIQEEIEDESD 428
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9637.17647.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.630e-14395.53protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.490e-13778.14protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
CNNM3.570e-6149.82transmembrane domain-containing protein n=1 Tax=Tr... [more]
Protein5.950e-4243.67mam3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7... [more]
Hypothetical2.330e-4040.84protein n=2 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Uncharacterized2.830e-3746.97protein ycf23 n=1 Tax=Nannochloropsis salina CCMP1... [more]
Uncharacterized2.720e-3450.00protein n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more]
Hypothetical4.070e-3442.00protein n=2 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Uncharacterized1.050e-3344.32protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
CNNM4.910e-3349.41transmembrane domain-containing protein n=3 Tax=Ph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9637contigE_fasciculatus_S2_contig9637:72..5574 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score333.2
Seed ortholog evalue1.5e-88
Seed eggNOG ortholog2880.D7FXS4
Model size2165
KEGG koko:K16302
KEGG TC9.A.40.3
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.magnesium ion homeostasis
EggNOG OGsCOG1253@1,KOG2118@2759
Ec32 ortholog descriptionDomain of unknown function DUF21
Ec32 orthologEc-03_001670.1
Cds size1098
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9637.17647.1prot_E_fasciculatus_S2_contig9637.17647.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9637 962..4819 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842609.5361803-UTR-E_fasciculatus_S2_contig9637:71..9611696842609.5361803-UTR-E_fasciculatus_S2_contig9637:71..961Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9637 72..961 -
1696842609.6290903-UTR-E_fasciculatus_S2_contig9637:4819..48851696842609.6290903-UTR-E_fasciculatus_S2_contig9637:4819..4885Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9637 4820..4885 -
1696842609.6406658-UTR-E_fasciculatus_S2_contig9637:5463..55741696842609.6406658-UTR-E_fasciculatus_S2_contig9637:5463..5574Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9637 5464..5574 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842609.5498862-CDS-E_fasciculatus_S2_contig9637:961..12531696842609.5498862-CDS-E_fasciculatus_S2_contig9637:961..1253Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9637 962..1253 -
1696842609.5612454-CDS-E_fasciculatus_S2_contig9637:1521..17661696842609.5612454-CDS-E_fasciculatus_S2_contig9637:1521..1766Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9637 1522..1766 -
1696842609.572278-CDS-E_fasciculatus_S2_contig9637:2351..25041696842609.572278-CDS-E_fasciculatus_S2_contig9637:2351..2504Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9637 2352..2504 -
1696842609.5834694-CDS-E_fasciculatus_S2_contig9637:2831..29461696842609.5834694-CDS-E_fasciculatus_S2_contig9637:2831..2946Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9637 2832..2946 -
1696842609.5953076-CDS-E_fasciculatus_S2_contig9637:3287..34361696842609.5953076-CDS-E_fasciculatus_S2_contig9637:3287..3436Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9637 3288..3436 -
1696842609.6063728-CDS-E_fasciculatus_S2_contig9637:3883..40091696842609.6063728-CDS-E_fasciculatus_S2_contig9637:3883..4009Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9637 3884..4009 -
1696842609.6178093-CDS-E_fasciculatus_S2_contig9637:4801..48191696842609.6178093-CDS-E_fasciculatus_S2_contig9637:4801..4819Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9637 4802..4819 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9637.17647.1

>prot_E_fasciculatus_S2_contig9637.17647.1 ID=prot_E_fasciculatus_S2_contig9637.17647.1|Name=mRNA_E_fasciculatus_S2_contig9637.17647.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=366bp
MITMDKVFCLGNHEKLDANTMADIMAAGYSRVLVYDGQDTRNIRGYLQVK
KLIVLSPDDERVISTLMLRVPVVVSPKKSLLELLNTFQTGKSHLALVSSS
PAITLESLKRGVPLEGAARPMGIITLEDIIEEIIQEEIMDESDRLSQFIE
DRAKDTLLRFARRRQERQKVGQINPRLTSFTTPRRVSELESEETNLLKHL
GAKNGPPSSRGSAPPISPSYQSMEGGNSFGRSRSNSPTMFSSSSPPAPPG
LDERASLLAGSARGSNRQERLGGAKNVKRGSATVGQAMIAAAAAAAAGRT
SRENSAHSDRSTSSLFRRVTAGSSSVNSPGGASSDTAAAEAAAAAAAAAL
LGADSSETGANGAET*
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mRNA from alignment at E_fasciculatus_S2_contig9637:72..5574-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9637.17647.1 ID=mRNA_E_fasciculatus_S2_contig9637.17647.1|Name=mRNA_E_fasciculatus_S2_contig9637.17647.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5503bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9637:72..5574- (Ectocarpus fasciculatus EfasUO2)
GACCGCGTCTTGGGCATCGAGGGGTTCAAGAGGTACAACCGGGCCGAGAT
CTCGGCGCTCGTGGAGGTGCAGCAGGAGCTGTCCTGCGAGGACGTCACCA
ACCTCCCCCTGGTGAGCAGCTGTGCATCTCGTGCAGGTTGCATGCGATAT
GTACCTCGCGACCTGGGCCGATTTTTCAAAGCCCGATTACTCCGCAACGA
ATACGATGTCACGATCAAGTCATGTCATGCGTTTTCGGAAAGCCTTCTCG
ATGAGAGGGAGGGTTCCAGCGCCTCCCGCCAGTTTCGGCATCCTGGCCGT
TTTTCCTGCAGATTGCCCGGGCTCTGAAATCGGGGGATGTGTTGTCTTAT
GCATCCTACGATAGCTCTCGGGGAGCCACTCATTTCTTGTGCAACCAGTC
AGGATTTTATGAAGCGGGCAGCAAGCATCACATCGCGATAACAGCGGGTG
GCTTTGAGCACCAGCTATGTCGGTCGGGTTCGTCTTTCCCCAACGAGTTG
TACCGTCACCGTCGACGCTCCGGCCCCGTGTGCCGGAGCGAAACGGCATC
AACCAAACCGACGTGCCTTTTATGTATTTTTTTTTCATTTTTCATGACTA
TTCGCCCCTTCTCGTCTCCCAATGGTCTAACAGCTAAGGTATGCAAACCA
CCCCCCCCTTTCGTCTTCGTTCGCTGTTGTTGCTCCCAGCACGCGGACGA
GGTTTCCATCGTTAACGGCGTTCTTCTCACGGCAGAGAAAAGCGTGGCCG
AGGCCATGATCACCATGGACAAGGTAGGGTACACTTGAGCGATAGAACGG
AAATCACACAGACGACTTGTTCTTGTTCTTGTCTTCACATTAAAACCGTT
CCGATCTCTCTACCCAGCACCTTCATCTGTCCCTACTGATCAAATACTAA
CACTTGACCGAGCGATTCCCGTGGTCACAGGCTATCTTACCTATTAAGTG
ACTGATGTTATTTGTTTATACTCCGGAGTATATATTTTGCCATCATATTT
CACGCTTGCATGCTGATTGTGCACACTGGTGCGCGATTCCTCCGACAACT
AAAAGTCTGTCTTCAACCGCTTGCGCCAGACTCGTTGGTTGGTTGCTGAA
AGTTTCGGGGAGGGGGGAGGCCTTTCTGGTCCCAACGTTAACGTTTTCGA
TTTTTGTGGGTGCGGCACGATTCTGTTGTGCGATGTGGACGTACCATGGG
TGAAGAGAGGAATTGGTAGAGGTTTACCCTTCTTCCCTTTACGCTCTCTG
CTCCCCGCCTTTTGGAAAACACGAACTCTACAATTCAACCAAGGTTGGGG
GGGGGAGGGTGCGGCTAAACGTCGCTTCTGTTGACCGCTTCGCTCACGGG
AGTTCCGTTTATTTCGTGAAAGGCGTGACGCGATCCTTAAGAGCAAAGAG
CAAAGTATAGGCTGCGGCCGACGACAAAAAGCAAGTGGGGTAGATCGTGA
AGCCACAAGATGGTACAAACCGCGGACGTGGCTCTTGCACTGCAGCGGGC
GTCCTCGTCTCACTCAAAGACATGTTATCGTTTTCGGGGGATGCGTGTTC
CGGGGGGAGGGGCAGGTTTTCTGCCTGGGTAACCACGAGAAGTTGGATGC
GAACACCATGGCGGACATCATGGCCGCCGGCTACAGCCGCGTCCTCGTGT
ACGACGGGCAGGACACCAGGAACATCCGCGGCTACCTTCAGGTGTGAGGG
TGCTTTTGTCGTTGCTGCCGCTGTCTTGTTGTAAGGCTGTGCTTTCCTAA
GTGGTCGATGTTACTGATGGCTGCGGTGGCGGTAGTGGCGTTGTGTTTCG
GCTAAATGTCTGCCGGACGATGGTGAGTTTTTCCCGGGCGAAACGGCTCA
CCGACGTTTTCTCCATGTTTAACGACAACATTTCAGAAGAAGCCGGTCTT
TGTCTCGATCAATGAAAGGACTGATTGCTCTCAACCCAGGCCATCAGTCG
ACAAGTCACTCTTCTGAGTTGTCACTTCGAAAACAAAAGAAAAACACCAA
GCCATGTATATAAAAGAGGGACTCGTCCTGTCCTTGAACGACATTGGGGA
GGCGTGACCCGTTTCTTGAAGCAAGAAGATCAACCCCACCACATGGGTAC
GTGTTTTTCACAGCTCTGCAACCAACCAACTTCCTCAGGTGAAGAAGCTG
ATCGTGCTGAGTCCGGACGATGAGCGCGTGATTAGCACGCTCATGCTGCG
CGTGCCCGTGGTGGTGTCCCCCAAGAAGAGCCTCCTCGAGCTGCTCAACA
CCTTCCAGACCGGAAAGTCCCACCTCGCCCTTGTCAGGTAGGTGGTGACA
GCTGACAGCCCCTTTGAGGAAAATCTCGGTCTCGTCCGGTATGCTCCGTG
CCCGTATACGGTGTGGTATGGTCCCGTGAAAGGGCCTCCTTCCCGACGGG
AAGGTCGCACCTCGCCCTTGTCAAGTACGCTCCGCGCCGTAGTGTTTGGT
AGGGCTGTGAAAGGGCGGGAAAGTCTCTCGGCGGTTAGTTCCGCGCCCGT
ATACGGTGTGGTATGCGTCCCGTGAAAGTTCACCTTCCAGACGGAAAATC
TCACGCGATCCCATGCCTTCTCCCCCCCCCCCACGTATTCATATCTGCCG
GCTTTTTCTTCTCTTCTTTCCCTTGTAGCTCATCCCCAGCCATCACCCTC
GAGTCTCTGAAACGCGGCGTCCCGCTAGAGGGGGCCGCGAGGCCCATGGG
CATCATCACCCTGGAGGACATCATAGAGGAGATCATCCAAGAGGTGAGCA
CACAAATGTCAAACACTGCTATTCTCTGAGTTAGTGTTTTCGTGGCGATG
AAAAAATTGTCCGAACCGGTGGCTGGTTGCCGTTTTCGCAACGCGTCACA
GAGAAGATCATGCAAAGCTAACCAGCTCTGTTAGGTATGGATCGGAGAGA
TACTTCTCTCCGCAGGTTTTTCTGTTTTTTTAGAGTATATATGACATCGC
AAGATTTTGTCATCATCCCCATTCCTCGCCCTAAGACTTGCGTTATCGTT
TTCTTGCGTGCGCACAACCAGCTCGTGATGCTCTTGCCCCCCCCGACACG
CACGTTTTCTAACACGGAAGGAAATCATGGACGAGAGCGACCGCCTGTCC
CAGTTCATCGAAGACCGCGCGAAGGATACCCTGTTGAGGTTCGCCAGGAG
GAGGCAGGAGCGTCAGAAAGTCGGCCAGATCAACCCGCGCCTGACATCCT
TCACCACCCCCCGCAGAGTGAGCGTTCACCAACACCAACTTGTGTGTTTT
ATTGTTGCTTGCATCCACCACCTCGGTGCGGTTAAAAACAGAAAATGCCT
CTAAAAGTCCGTGTGTGTGAGTTTGATGGTCGCGTCGATAACTAAAGGCA
GACCGATGAAAAGACGTTTCTATCCAGCTGCTTCTATTGGGCAAGACCTG
GGGTGGGTTTATGCATTTTATTTTGATAGGCAGCGACCGCGCTAACCGGC
AGGCACATGGGAAGGACGTAAGTCTCATAGCGGGATGCAACACACGCATG
CGCTTTCTGTGTCACGTGTGATGCCAGCTGTGCCGTCGAAGTAAACTAAG
TAAAGTGAAAATGGTAGGTACTAGTCGCCGCGGCGGAGCGAGCGAGCAAG
GTGCGTGATTCTGGACGGGAAAGAATTGGGCGTGGATATGGTGACCACAA
GAGGAAAAGGTGGACCAATGGGATGTACAGTAAGAGAAACTAAGACCAGA
TCACGGAACATGAGCACATGGTCACACCCCCCTCCCCCCCCGGCGCTTGT
TTTCCTGTACGACCGAATCGGTCTCGCGAAAACTACTACTACAAACCCCT
TCGTGAAGGAGCTTGAGAGCGAAGAGACCAACCTCCTCAAGCACCTCGGC
GCGAAGAACGGCCCCCCGTCCTCCCGGGGCAGCGCGCCCCCGATCTCCCC
TTCGTACCAGTCCATGGAAGGCGGCAACAGCTTCGGCCGCAGCCGCTCCA
ACAGCCCCACCATGTTCTCCTCCTCTTCCCCGCCCGCCCCGCCCGGGCTG
GACGAGCGCGCCTCGCTGTTGGCGGGCTCTGCGCGGGGCTCCAACAGGCA
AGAGTTCGTTCGTCTTCTCGGAAGGGTGTTCCATGAAGGCGTGTTTTTTG
TTTGATGACCTTTTCGCTTGTTTTTGACACACACACTCGTGCGTTCGTCG
TGAACAGCGTTTGAGATGCGTCCGATGTTTGCACCACGCAGCAAGAACGG
TCTGCGTGCAGCTGTTTGTGTCGTGCTACCTTGAGCCACGTTTCCCCCAT
CACCCTTGTCTGTCGCCGTCGCCGCTCACACAAAATACCACAAAAATAAT
ATAATATAAAAATAATGACAGGCGCCTAGGCGGTGCCAAGAACGTCAAAA
GAGGGAGCGCGACGGTGGGGCAGGCGATGATTGCGGCGGCCGCGGCGGCG
GCGGCGGGGAGGACCAGCAGGGAGAACAGCGCCCACAGCGACAGGTCCAC
CTCTTCGCTGTTCAGGCGTGTCACCGCGGGATCGTCGTCCGTCAACAGCC
CCGGCGGTGCTTCCTCCGACACGGCGGCGGCGGAGGCGGCCGCGGCCGCG
GCGGCGGCAGCGCTGCTTGGCGCCGATAGTTCGGAAACGGGCGCCAACGG
CGCCGAAACGTGATGGTCTTGCGCACAGCGGTAGTAGTATTTTCCCCCAT
GAGCAGGAAGGCACCAGTTGTTGCGCACGCTCAGAAAGGGGCTGGTAGGG
GGAGCTCTTGCAGCTCCGTCCGTCCTGCTTCAGCTAAAGTTTGGAGACTA
TGTAAGGCTCTACTTTTTTCTAACTTTTTTGTTGTGGGTCGAATCGGCAT
TCTCGGTAGGCGGGGGCACCGGTGGGCCATCGGCGTTCATGCCGGGGAGT
GACGAGGGCGCGCTAGGAAGAGCGGCAAGTTGTGGCAAGCTGGCTTGTTT
TGCTGTGGAGGCCGCCGCCCATGACTATCTGGCAAAGGATGTTTCCTGTG
TCTGTAGGTCCCGGGTAGGATGGGAAATTGTCACACAACTCTCCGAACAA
TCGGGTAGGGTTCGGAGGTGCCGCCGAACTCAAGAGGAAAAAATCGGGTG
TTTGAGCACGTCGTACGGAACTCACGGAAAGTTTCAGATATGTTCCACAA
AAAAGAATACCGCACCCGCGCCGCACGGGTATGTATGGTTTTCCCTGTCC
CGGTATTTTACGCTGTTTTCGGGGGCACTTTATACCCTTTGCTCCCTGTG
TGTTACTTTATTTGTATTGTGCCCGCACCCCGGGTATACTGAACTCACAG
AACATCCCGGTAGGGTTTCGGACCCGTCACAGAACTCGCGGATTTTACCG
GTAGAGACATGTACCCCGGTAGAACCAGAACCAGAACCAGAACCCCGCGG
GGCGCCGCTGTACGTACCCTGCAGGACACCATGTTTACTTGCTAGGGTTA
CGCAGATGAGTTTCGCGTCGGTGTCGGCCGCCGTCGGCACTAAAGTTTCA
ATGCAGGGGTGTCCGTGGAATCAGCCGAGAGCTTGCGTTGGGGGGGGGGG
GGG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9637:72..5574-

>mRNA_E_fasciculatus_S2_contig9637.17647.1 ID=mRNA_E_fasciculatus_S2_contig9637.17647.1|Name=mRNA_E_fasciculatus_S2_contig9637.17647.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1098bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9637:72..5574- (Ectocarpus fasciculatus EfasUO2)
ATGATCACCATGGACAAGGTTTTCTGCCTGGGTAACCACGAGAAGTTGGA
TGCGAACACCATGGCGGACATCATGGCCGCCGGCTACAGCCGCGTCCTCG
TGTACGACGGGCAGGACACCAGGAACATCCGCGGCTACCTTCAGGTGAAG
AAGCTGATCGTGCTGAGTCCGGACGATGAGCGCGTGATTAGCACGCTCAT
GCTGCGCGTGCCCGTGGTGGTGTCCCCCAAGAAGAGCCTCCTCGAGCTGC
TCAACACCTTCCAGACCGGAAAGTCCCACCTCGCCCTTGTCAGCTCATCC
CCAGCCATCACCCTCGAGTCTCTGAAACGCGGCGTCCCGCTAGAGGGGGC
CGCGAGGCCCATGGGCATCATCACCCTGGAGGACATCATAGAGGAGATCA
TCCAAGAGGAAATCATGGACGAGAGCGACCGCCTGTCCCAGTTCATCGAA
GACCGCGCGAAGGATACCCTGTTGAGGTTCGCCAGGAGGAGGCAGGAGCG
TCAGAAAGTCGGCCAGATCAACCCGCGCCTGACATCCTTCACCACCCCCC
GCAGAGTGAGCGAGCTTGAGAGCGAAGAGACCAACCTCCTCAAGCACCTC
GGCGCGAAGAACGGCCCCCCGTCCTCCCGGGGCAGCGCGCCCCCGATCTC
CCCTTCGTACCAGTCCATGGAAGGCGGCAACAGCTTCGGCCGCAGCCGCT
CCAACAGCCCCACCATGTTCTCCTCCTCTTCCCCGCCCGCCCCGCCCGGG
CTGGACGAGCGCGCCTCGCTGTTGGCGGGCTCTGCGCGGGGCTCCAACAG
GCAAGAGCGCCTAGGCGGTGCCAAGAACGTCAAAAGAGGGAGCGCGACGG
TGGGGCAGGCGATGATTGCGGCGGCCGCGGCGGCGGCGGCGGGGAGGACC
AGCAGGGAGAACAGCGCCCACAGCGACAGGTCCACCTCTTCGCTGTTCAG
GCGTGTCACCGCGGGATCGTCGTCCGTCAACAGCCCCGGCGGTGCTTCCT
CCGACACGGCGGCGGCGGAGGCGGCCGCGGCCGCGGCGGCGGCAGCGCTG
CTTGGCGCCGATAGTTCGGAAACGGGCGCCAACGGCGCCGAAACGTGA
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