prot_E_fasciculatus_S2_contig962.17636.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig962.17636.1
Unique Nameprot_E_fasciculatus_S2_contig962.17636.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length176
Homology
BLAST of mRNA_E_fasciculatus_S2_contig962.17636.1 vs. uniprot
Match: D7FQA4_ECTSI (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA4_ECTSI)

HSP 1 Score: 322 bits (826), Expect = 1.600e-101
Identity = 155/160 (96.88%), Postives = 157/160 (98.12%), Query Frame = 0
Query:    1 VGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQVFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHSKERY 160
            VGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQ FDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYN+  ER+
Sbjct:  151 VGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNNDHERH 310          
BLAST of mRNA_E_fasciculatus_S2_contig962.17636.1 vs. uniprot
Match: A0A836CFV8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV8_9STRA)

HSP 1 Score: 232 bits (591), Expect = 2.040e-68
Identity = 113/164 (68.90%), Postives = 131/164 (79.88%), Query Frame = 0
Query:    1 VGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGN--FQVFDLDDVDAAFARFKTLKFSQHLTFS--GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHSKERY 160
            VG VTILLDCGWDI FD +LL PL  VV R+DLVLISH DLEHLGGLPYA GKLG++A V+ATLP  KMGQM VYDA+  R+ E N  F+ F LDD DAAF RF+ LK+SQHL FS  GRGAGVTITPYAAG +IG ++WR+ WQT+DNDIVYA +YNH +E +
Sbjct:   73 VGDVTILLDCGWDIDFDESLLAPLASVVSRVDLVLISHADLEHLGGLPYAVGKLGLKAPVFATLPTLKMGQMTVYDAHQMRSLEANGTFKAFTLDDADAAFERFQPLKYSQHLRFSEGGRGAGVTITPYAAGHIIGGSLWRICWQTDDNDIVYAVSYNHRREEH 236          
BLAST of mRNA_E_fasciculatus_S2_contig962.17636.1 vs. uniprot
Match: A0A6B2L931_9EUKA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L931_9EUKA)

HSP 1 Score: 192 bits (488), Expect = 1.840e-57
Identity = 90/155 (58.06%), Postives = 116/155 (74.84%), Query Frame = 0
Query:    6 ILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQVFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHSKERY 160
            ILLDCGW+  +D  LL+PL+ VV +I+ VLISHPDL HLG LPYA GKLG++AK+  T+PV+KMGQM +YDAY SR +   F VF+LDDVDAAF  F  LK+SQ  T SG+G  + ITPYAAG +IG  +W++  +T++  I+YA  YNH KER+
Sbjct:   30 ILLDCGWNDDYDVQLLKPLKRVVGKINAVLISHPDLHHLGALPYAVGKLGLKAKIIGTIPVYKMGQMFMYDAYQSRQNSEEFTVFNLDDVDAAFDNFVQLKYSQRYTLSGKGIKLEITPYAAGHLIGGTIWKIKRETDE--IIYAVDYNHKKERH 182          
BLAST of mRNA_E_fasciculatus_S2_contig962.17636.1 vs. uniprot
Match: D0P072_PHYIT (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Phytophthora TaxID=4783 RepID=D0P072_PHYIT)

HSP 1 Score: 186 bits (471), Expect = 2.020e-56
Identity = 89/166 (53.61%), Postives = 117/166 (70.48%), Query Frame = 0
Query:    1 VGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRT-HEGNFQVFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHSKERYFHRLL 165
            V  V ILLDCGW   +D  LL+PL+ VV RIDLVL+SH DL H+G LPYA GKLG+ A VY TLPV +MGQ+A+YDA+ ++T H+ +F +F LDDVD  F RFK LK+S+ LT +  G G+ ITP+ AG +IG A+WR+  +T+D  I+YA  YNH  E    + +
Sbjct:   25 VDEVCILLDCGWTDAYDVELLKPLQRVVDRIDLVLVSHLDLAHMGALPYAMGKLGLSAPVYGTLPVHRMGQIALYDAFQAKTKHDSDFSLFSLDDVDLVFERFKQLKYSEKLTLTSSGEGIVITPHVAGHLIGGALWRIMKETDD--IIYAVDYNHRSEHVLQKTI 188          
BLAST of mRNA_E_fasciculatus_S2_contig962.17636.1 vs. uniprot
Match: M2XHI7_GALSU (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XHI7_GALSU)

HSP 1 Score: 198 bits (503), Expect = 2.260e-56
Identity = 93/155 (60.00%), Postives = 116/155 (74.84%), Query Frame = 0
Query:    6 ILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQVFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHSKERY 160
            ILLDCGW+  F+  LLEPLR +  R+D VLISHPDL HLG LPYA  KLG+RA  YATLPVW+MGQ+ +YDA+ SR  + +FQVFDLDDVD+AF  F  LK+ Q + FS RG G+TITP+ AG MIG  VW++  Q+E  +IVYA  +NH +ER+
Sbjct:   31 ILLDCGWNDRFEETLLEPLRRIAPRVDAVLISHPDLFHLGALPYAVAKLGLRAPTYATLPVWRMGQLFMYDAHQSRAMQEDFQVFDLDDVDSAFENFIQLKYQQIVNFSERGKGITITPHPAGHMIGGTVWKI--QSETEEIVYANDFNHKRERH 183          
BLAST of mRNA_E_fasciculatus_S2_contig962.17636.1 vs. uniprot
Match: A0A2P4YIS9_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YIS9_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.740e-55
Identity = 89/166 (53.61%), Postives = 117/166 (70.48%), Query Frame = 0
Query:    1 VGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRT-HEGNFQVFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHSKERYFHRLL 165
            V  V ILLDCGW   +D  LL+PL+ VV RIDLVL+SH DL H+G LPYA GKLG+ A VY TLPV +MGQ+A+YDA+ ++T H+ +F +F LDDVD  F RFK LK+S+ LT +  G G+ ITP+ AG +IG A+WR+  +T+D  I+YA  YNH  E    + +
Sbjct:   25 VDEVCILLDCGWTDEYDVELLKPLQRVVDRIDLVLVSHLDLAHMGALPYAMGKLGLNAPVYGTLPVHRMGQIALYDAFQAKTKHDSDFSLFSLDDVDLVFERFKQLKYSEKLTLTSSGEGIVITPHVAGHLIGGALWRIMKETDD--IIYAVDYNHRSEHVLQKTI 188          
BLAST of mRNA_E_fasciculatus_S2_contig962.17636.1 vs. uniprot
Match: C1FDL7_MICCC (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FDL7_MICCC)

HSP 1 Score: 194 bits (493), Expect = 1.070e-54
Identity = 91/158 (57.59%), Postives = 116/158 (73.42%), Query Frame = 0
Query:    3 GVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQVFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHSKERY 160
            G  ILLDCGW+  FD  LLEPL +V   +D VLISHPD EHLG LPYAFGKLGMR KVYATLPV KMG M +YD ++SR    +F+VF LDD+D AF+ F  ++++Q     G GAG+TITPYAAG M+G A+W+V  +T+D  +VYA  +NH +E++
Sbjct:   32 GFKILLDCGWNDSFDVNLLEPLAKVAAEVDAVLISHPDTEHLGALPYAFGKLGMRCKVYATLPVHKMGLMFMYDHFLSRNANEDFRVFTLDDIDTAFSAFVPVRYAQRSALVGHGAGITITPYAAGHMLGGALWKVHKETDD--VVYAVNFNHRREKH 187          
BLAST of mRNA_E_fasciculatus_S2_contig962.17636.1 vs. uniprot
Match: A0A6B2KYM6_9EUKA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYM6_9EUKA)

HSP 1 Score: 192 bits (488), Expect = 3.200e-54
Identity = 90/155 (58.06%), Postives = 116/155 (74.84%), Query Frame = 0
Query:    6 ILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQVFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHSKERY 160
            ILLDCGW+  +D  LL+PL+ VV +I+ VLISHPDL HLG LPYA GKLG++AK+  T+PV+KMGQM +YDAY SR +   F VF+LDDVDAAF  F  LK+SQ  T SG+G  + ITPYAAG +IG  +W++  +T++  I+YA  YNH KER+
Sbjct:   30 ILLDCGWNDDYDVQLLKPLKRVVGKINAVLISHPDLHHLGALPYAVGKLGLKAKIIGTIPVYKMGQMFMYDAYQSRQNSEEFTVFNLDDVDAAFDNFVQLKYSQRYTLSGKGIKLEITPYAAGHLIGGTIWKIKRETDE--IIYAVDYNHKKERH 182          
BLAST of mRNA_E_fasciculatus_S2_contig962.17636.1 vs. uniprot
Match: K3WHC0_GLOUD (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHC0_GLOUD)

HSP 1 Score: 188 bits (477), Expect = 1.090e-52
Identity = 88/166 (53.01%), Postives = 119/166 (71.69%), Query Frame = 0
Query:    1 VGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTH-EGNFQVFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHSKERYFHRLL 165
            +  V ILLDCGW   +DT LL+PL+ V+ RIDLVLISH DL H+G LPYA GKLG++A +Y TLPV +MGQ+A+YDAY ++T  +G+F +F LDDVDA F  FK LK+S+ LT +  G G+ ITP+ AG +IG ++WR+  +T+D  I+YA  YNH  E    + +
Sbjct:   25 IDDVCILLDCGWTDQYDTELLKPLQRVIDRIDLVLISHLDLAHMGALPYAIGKLGLKAPIYGTLPVHRMGQIALYDAYQAKTKSDGDFALFTLDDVDAVFENFKQLKYSEKLTLTSSGEGIVITPHVAGHLIGGSLWRIEKETDD--IIYAVDYNHRSEHVLQKTI 188          
BLAST of mRNA_E_fasciculatus_S2_contig962.17636.1 vs. uniprot
Match: H3GZX6_PHYRM (Cleavage and polyadenylation specificity factor subunit 2 n=28 Tax=Peronosporaceae TaxID=4777 RepID=H3GZX6_PHYRM)

HSP 1 Score: 187 bits (476), Expect = 1.340e-52
Identity = 89/166 (53.61%), Postives = 117/166 (70.48%), Query Frame = 0
Query:    1 VGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRT-HEGNFQVFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHSKERYFHRLL 165
            V  V ILLDCGW   +D  LL+PL+ VV R+DLVL+SH DL H+G LPYA GKLG+ A VY TLPV +MGQ+A+YDA+ ++T HE +F +F LDDVD  F RFK LK+S+ LT +  G G+ ITP+ AG +IG A+WR+  +T+D  I+YA  YNH  E    + +
Sbjct:   25 VDEVCILLDCGWTDEYDVELLKPLQRVVDRVDLVLVSHLDLAHMGALPYAMGKLGLNAPVYGTLPVHRMGQIALYDAFQAKTKHESDFSLFSLDDVDLVFERFKQLKYSEKLTLTSSGEGIVITPHVAGHLIGGALWRIMKETDD--IIYAVDYNHRSEHVLQKTI 188          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig962.17636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQA4_ECTSI1.600e-10196.88Cleavage and polyadenylation specificity factor su... [more]
A0A836CFV8_9STRA2.040e-6868.90Cleavage and polyadenylation specificity factor su... [more]
A0A6B2L931_9EUKA1.840e-5758.06Cleavage and polyadenylation specificity factor su... [more]
D0P072_PHYIT2.020e-5653.61Cleavage and polyadenylation specificity factor su... [more]
M2XHI7_GALSU2.260e-5660.00Cleavage and polyadenylation specificity factor su... [more]
A0A2P4YIS9_9STRA1.740e-5553.61Cleavage and polyadenylation specificity factor su... [more]
C1FDL7_MICCC1.070e-5457.59Cleavage and polyadenylation specificity factor su... [more]
A0A6B2KYM6_9EUKA3.200e-5458.06Cleavage and polyadenylation specificity factor su... [more]
K3WHC0_GLOUD1.090e-5253.01Cleavage and polyadenylation specificity factor su... [more]
H3GZX6_PHYRM1.340e-5253.61Cleavage and polyadenylation specificity factor su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001279Metallo-beta-lactamasePFAMPF16661Lactamase_B_6coord: 3..162
e-value: 1.6E-53
score: 181.0
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 1..172
e-value: 3.3E-53
score: 182.3
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 2..169
IPR027075Cleavage and polyadenylation specificity factor subunit 2PANTHERPTHR45922FAMILY NOT NAMEDcoord: 3..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig962contigE_fasciculatus_S2_contig962:23646..24984 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig962.17636.1mRNA_E_fasciculatus_S2_contig962.17636.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig962 23646..24984 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig962.17636.1 ID=prot_E_fasciculatus_S2_contig962.17636.1|Name=mRNA_E_fasciculatus_S2_contig962.17636.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=176bp
VGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYA
FGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQVFDLDDVDAAFA
RFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYA
TAYNHSKERYFHRLLCNICHRRTTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027075CPSF2
IPR036866RibonucZ/Hydroxyglut_hydro
IPR001279Metallo-B-lactamas