prot_E_fasciculatus_S2_contig962.17635.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig962.17635.1
Unique Nameprot_E_fasciculatus_S2_contig962.17635.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length93
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig962.17635.1 vs. uniprot
Match: A0A6H5L304_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L304_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 2.370e-33
Identity = 73/95 (76.84%), Postives = 73/95 (76.84%), Query Frame = 0 
Query:    1 MNHTGATA---VPGKAPLKLLQWALSQLEECARLRSVPASNVVEVAMAAIKDEMGVPVGAQQPNPPVVTDSPPAAGVAVHPA-APRASGGAVDRS 91
            M H GATA   VPGKAPLKLLQWALSQLEECAR RSVPASNVVEVAMAAIKDEMGVP G QQ          PAA VA HPA APR SGGAVDRS
Sbjct:   19 MKHPGATAAAAVPGKAPLKLLQWALSQLEECARTRSVPASNVVEVAMAAIKDEMGVPAGEQQS---------PAADVAAHPASAPRTSGGAVDRS 104
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BLAST of mRNA_E_fasciculatus_S2_contig962.17635.1 vs. uniprot
Match: D7FQA4_ECTSI (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA4_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 3.410e-31
Identity = 74/94 (78.72%), Postives = 74/94 (78.72%), Query Frame = 0 
Query:    1 MNHTGATA--VPGKAPLKLLQWALSQLEECARLRSVPASNVVEVAMAAIKDEMGVPVGAQQPNPPVVTDSPPAAGVAVHPA-APRASGGAVDRS 91
            MNH GATA  VPGKAPLKLLQWALSQLEECAR RSVPASNVVEVAMAAIKDEMGVP G QQP         PAAGVA HPA APR SG AVD S
Sbjct:   19 MNHHGATAAAVPGKAPLKLLQWALSQLEECARTRSVPASNVVEVAMAAIKDEMGVPAGEQQP---------PAAGVAAHPASAPRTSGSAVDGS 103
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig962.17635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L304_9PHAE2.370e-3376.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQA4_ECTSI3.410e-3178.72Cleavage and polyadenylation specificity factor su... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig962contigE_fasciculatus_S2_contig962:22812..23090 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig962.17635.1mRNA_E_fasciculatus_S2_contig962.17635.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig962 22812..23090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig962.17635.1 ID=prot_E_fasciculatus_S2_contig962.17635.1|Name=mRNA_E_fasciculatus_S2_contig962.17635.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=93bp
MNHTGATAVPGKAPLKLLQWALSQLEECARLRSVPASNVVEVAMAAIKDE
MGVPVGAQQPNPPVVTDSPPAAGVAVHPAAPRASGGAVDRSAK
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