prot_E_fasciculatus_S2_contig9616.17628.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9616.17628.1
Unique Nameprot_E_fasciculatus_S2_contig9616.17628.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length268
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9616.17628.1 vs. uniprot
Match: D8LD70_ECTSI (Condensin complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD70_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 5.280e-88
Identity = 213/271 (78.60%), Postives = 221/271 (81.55%), Query Frame = 0 
Query:    1 MLLNNLSVSDGCKVSFDSESSAAAATAPPTPEGADGQPRREKVFRNPEDVEDGEEGKDRETPVGEEAGEQHPAAAEAGGGMTNIKDLRSTLFSLCGDLSSLALCPQLQEFRDQIAEIEDETHKDSGEASAPHAGRGGTRGGGAVGSYDTDXXXXXXXXXXXXFDDVPGLDDASVXXXXXXXXXXXXXXAGHDFSLGXXXXDDD-ADPFQADXXXXXXXXXXTSFLVDGDGEFXXXLXSGGGAGSPESGGVGMV---VTPVTLEDRLCVDMK 267
            MLLNNLSVSDGCKVSFDSESSAAA TAPP+PEGA+ QPRREKVFR PEDVEDGEE KD ETP GEEAGEQHPAAAEA GGMTNIKDLRSTLFSLCGDLS+LALCPQL+EFRDQIAEIE+ETHKDSGEA+AP AGRGG RG GA  SYDTD XXXXXXXXX  FD+VPGLDDASV   XXXXXXXXXXX   DF+L XXXX    ADPFQAD XXXXXXXX TSFLVDGDGE  XX X                   VTPVTLEDRLCVDMK
Sbjct:  145 MLLNNLSVSDGCKVSFDSESSAAA-TAPPSPEGAEDQPRREKVFRKPEDVEDGEESKDGETPTGEEAGEQHPAAAEAAGGMTNIKDLRSTLFSLCGDLSTLALCPQLEEFRDQIAEIEEETHKDSGEAAAPRAGRGGARGDGAAVSYDTDDXXXXXXXXX--FDNVPGLDDASVDGGXXXXXXXXXXXX--DFNLXXXXXXXXXADPFQADNXXXXXXXXGTSFLVDGDGEIGXXXXXXXXXXXXXXXXXXXXXXXVTPVTLEDRLCVDMK 410
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BLAST of mRNA_E_fasciculatus_S2_contig9616.17628.1 vs. uniprot
Match: A0A6H5K318_9PHAE (Condensin complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K318_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 3.020e-75
Identity = 157/206 (76.21%), Postives = 170/206 (82.52%), Query Frame = 0 
Query:    1 MLLNNLSVSDGCKVSFDSESSAAAATAPPTPEGADGQPRREKVFRNPEDVEDGEEGKDRETPVGEEAGEQHPAAAEAGGGMTNIKDLRSTLFSLCGDLSSLALCPQLQEFRDQIAEIEDETHKDSGEASAPHAGRGGTRG--GGAVGSYDTDXXXXXXXXXXXXFDDVPGLDDASVXXXXXXXXXXXXXXAGHDFSLGXXXXDDDA 204
            MLLNNLSVSDGCKVSFDSESSAAA TAPP+PEGA  + RR+KVFR PE V+DGE+ KD ETP  EEAG+QHPAAAEA  GMTNIKDLRSTLFSLCGDLS+LALCPQL+EFRDQIAEIE+ET++DSGEA+APHAGRGG RG  GGA  SYDT  XXXXXXXXXXXFDDVPGLDDASV           XX  GHDF+LG    DDDA
Sbjct:  169 MLLNNLSVSDGCKVSFDSESSAAA-TAPPSPEGAVDRSRRDKVFRKPEGVDDGEDSKDGETPAEEEAGKQHPAAAEAAEGMTNIKDLRSTLFSLCGDLSTLALCPQLEEFRDQIAEIEEETNRDSGEAAAPHAGRGGARGDDGGAEASYDT--XXXXXXXXXXXFDDVPGLDDASVDGGGNFGAGGDXX--GHDFNLGGGADDDDA 369
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9616.17628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD70_ECTSI5.280e-8878.60Condensin complex subunit 2 n=1 Tax=Ectocarpus sil... [more]
A0A6H5K318_9PHAE3.020e-7576.21Condensin complex subunit 2 n=1 Tax=Ectocarpus sp.... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9616contigE_fasciculatus_S2_contig9616:867..3401 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9616.17628.1mRNA_E_fasciculatus_S2_contig9616.17628.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9616 861..3401 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9616.17628.1 ID=prot_E_fasciculatus_S2_contig9616.17628.1|Name=mRNA_E_fasciculatus_S2_contig9616.17628.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=268bp
MLLNNLSVSDGCKVSFDSESSAAAATAPPTPEGADGQPRREKVFRNPEDV
EDGEEGKDRETPVGEEAGEQHPAAAEAGGGMTNIKDLRSTLFSLCGDLSS
LALCPQLQEFRDQIAEIEDETHKDSGEASAPHAGRGGTRGGGAVGSYDTD
DDSDGGGGGGGGFDDVPGLDDASVDGGGDFGGGGGDDDAGHDFSLGGGAA
DDDADPFQADNGGGFGGGGGTSFLVDGDGEFGGGLGSGGGAGSPESGGVG
MVVTPVTLEDRLCVDMKA
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