mRNA_E_fasciculatus_S2_contig9610.17625.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9610.17625.1 vs.
Match: SAP (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPG6_ECTSI) HSP 1 Score: 625 bits (1612), Expect = 4.180e-217 Identity = 332/387 (85.79%), Postives = 349/387 (90.18%), Query Frame = 1
Query: 34 MPLPSDSQRRRGRLQSWRGSVSGSGILIGLQLLARGADGFNPPLLQASAAGLGVGLLSLAEQRRLPSTCTTRSQSSSEDSRRPVTTDSSTHNP-GSRGCHGSRRGARRVNRLGAAAADNGGPEHQRRNGYEMEEGWEGRAWAVEGDGTVEGVGGNVGVSTGXXXXXXXSNAVSPEESMDAAAKLSVPLKVMVFIDGTWLFYSFFGRGERCHVSAKLGPGWVYEYNVMWERLPVIISRAVHAQLARHGQSARLVEVVRSVVFSSARKDTDKDSTRMRMFDAMREKNFEVHMATTIGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFEPIWINEYLDDLMEYVPSA 1191
MPLPSDSQRRR RL+SWRGSVSGSGILIGLQLLARGADGFNPPLL+ SAAGLGVGLLSLAEQRRLPST TTR Q ++ D+R + DSSTHNP GSRGCHGS+RGARR +RL AA DNGGPE+QRRNGY+MEE EGRAW VEG +VGVS XXXXX SNAV EESMDAAAKLSVPLKVMVFIDGTWL+YSFFGRGERCHVSAKLGPGWVYEYNV WE LPVIISRAVHAQLAR+GQS+RLVEVVR+VVFSSARKDTDKDSTRMRMF+AMREKNFEVHMATT+GVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHV DFEPIWINEYLDDLMEYVP
Sbjct: 1 MPLPSDSQRRRRRLRSWRGSVSGSGILIGLQLLARGADGFNPPLLEPSAAGLGVGLLSLAEQRRLPSTSTTRWQRTAPDNRL-YSEDSSTHNPAGSRGCHGSKRGARRGSRLAAADDDNGGPEYQRRNGYDMEERLEGRAWVVEGGXXXXXXXXDVGVSXXXXXXXAVSNAVPTEESMDAAAKLSVPLKVMVFIDGTWLYYSFFGRGERCHVSAKLGPGWVYEYNVKWEMLPVIISRAVHAQLARYGQSSRLVEVVRTVVFSSARKDTDKDSTRMRMFNAMREKNFEVHMATTVGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVTDFEPIWINEYLDDLMEYVPPV 386
BLAST of mRNA_E_fasciculatus_S2_contig9610.17625.1 vs.
Match: NYN (domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR6_9STRA) HSP 1 Score: 238 bits (607), Expect = 2.010e-73 Identity = 116/201 (57.71%), Postives = 146/201 (72.64%), Query Frame = 1
Query: 592 LKVMVFIDGTWLFYSFFGRGER-CHVSAKLGPGWVYEYNVMWERLPVIISRAVHAQLARHGQSARLVEVVRSVVFSSARKDTDKDSTRMRMFDAMREKNFEVHMATTIGVQEKCIDIALAVEMMHYATIPDTY-----DVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFEPIWINEYLDDLME 1176
L+V VF+DGTWL+YSFF R R C + +KLG W +Y V+WER+PVI+ RA+ QL Q+ R VEV R+ VFSS R+DTD +S RMRMF M+ NF+VH++ T G+QEKCIDIALAV+M+HYAT+P Y D + DKDFMPAM RTR+KG+RV LCSMRNSCN+ALL AH MDF IW+++Y D+L E
Sbjct: 1 LQVQVFVDGTWLYYSFFARTTRNCEIRSKLGAYWYRDYKVLWERIPVIVGRAIQEQLQAQQQTDRFVEVYRTTVFSSLRQDTDPESLRMRMFTQMQRLNFDVHLSVTTGLQEKCIDIALAVDMLHYATVPGAYVHFQCDELPHIYRDKDFMPAMLRTREKGKRVGLCSMRNSCNRALLDPAAHTMDFGVIWLDDYFDELFE 201
BLAST of mRNA_E_fasciculatus_S2_contig9610.17625.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WHV0_EMIHU) HSP 1 Score: 241 bits (615), Expect = 6.230e-72 Identity = 115/215 (53.49%), Postives = 154/215 (71.63%), Query Frame = 1
Query: 547 SPEESMDAAAKLSVPLKVMVFIDGTWLFYSFFGRGERCHVSAKLGPGWVYEYNVMWERLPVIISRAVHAQLARHGQSARLVEVVRSVVFSSARKDTDKDSTRMRMFDAMREKNFEVHMATTIGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFEPIWINEYLDDLMEYVPSA 1191
S E ++ A + PL+VMVF+DG+WL+YSF GR C V + G GW + +V ++RLP +IS+ +H QL R + R VE+ R++VF+S R DT + S RM MF M FEVH+ TT G+QEKCIDI+LAVEMMHYA+IP YD+ VL++GDKDF+PAM+R RQKG+ V LCSMRN C++ LL +AHV DFEPIW+++YLD ++ P A
Sbjct: 60 SAESGLEYQAS-AFPLRVMVFVDGSWLYYSFHGRRPNCPVQQRYGDGWAFSNSVAFDRLPYLISQHIHQQLLRRYGTRRFVEITRTMVFTSYRADTHRRSLRMSMFRQMAAAGFEVHVRTTTGLQEKCIDISLAVEMMHYASIPGAYDIAVLISGDKDFIPAMSRIRQKGKSVALCSMRNCCSRDLLDPNAHVRDFEPIWLDDYLDLIVLPSPKA 273
BLAST of mRNA_E_fasciculatus_S2_contig9610.17625.1 vs.
Match: NYN (domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J6Q8_9EUKA) HSP 1 Score: 234 bits (597), Expect = 4.140e-70 Identity = 106/191 (55.50%), Postives = 144/191 (75.39%), Query Frame = 1
Query: 601 MVFIDGTWLFYSFFGRGERCHVSAKLGPGWVYEYNVMWERLPVIISRAVHAQLARHGQSARLVEVVRSVVFSSARKDTDKDSTRMRMFDAMREKNFEVHMATTIGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFEPIWINEYLDDLM 1173
M+FIDG+WL+YS GR C V+ K G GW Y +++ ++RLP +I++ +H ++ ++ R VEVVRSV F+S R DTD S R R+F M + N++VH++TT+G QEKCIDIALAVEMMHYA++P YDV VLV+GDKDFMPA++R R KG+RV +CSMRN C+ LL AHV DFEPIW++++LD L+
Sbjct: 1 MIFIDGSWLYYSLHGRRPNCPVTRKYGEGWEYSHSIDFDRLPQLIAQRLHKEMLERFKTQRFVEVVRSVAFASMRADTDVQSPRKRLFKGMEKANYDVHLSTTVGHQEKCIDIALAVEMMHYASLPGAYDVAVLVSGDKDFMPALSRIRTKGKRVAICSMRNCCSHDLLGPQAHVRDFEPIWLDDHLDYLI 191
BLAST of mRNA_E_fasciculatus_S2_contig9610.17625.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DSQ3_9STRA) HSP 1 Score: 215 bits (548), Expect = 1.390e-61 Identity = 101/202 (50.00%), Postives = 143/202 (70.79%), Query Frame = 1
Query: 586 VPLKVMVFIDGTWLFYSFFGRGERCHVSAKLGPGWVYEYNVMWERLPVIISRAVHAQLARHGQSARLVEVVRSVVFSSARKDTDKDSTRMRMFDAMREKNFEVHMATTIGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFEPIWINEYLDDLMEYVPSA 1191
VPLK M+F+DGTWL+YS FGR +RC + K G GW Y+V + LP +I + ++ ++R +++VR+ VF+S + DT S R RMF+ M+E N++V+ T+G EKC+DI LAVEM+HYATIP+ YD+ +L+TGDKDF+PA+ RTRQKGR+V L SMR+SCNQAL RD + D++ IW ++LDD++ P A
Sbjct: 245 VPLKAMLFVDGTWLYYSLFGREDRCPIQKKFGLGWPQRYDVDYSVLPKVICKNLNDLGWSSMDTSRPIDIVRASVFTSYKADTPSTSLRYRMFEEMKEANYDVNQMETVGRGEKCVDIQLAVEMLHYATIPNAYDIAILLTGDKDFLPALVRTRQKGRKVALVSMRSSCNQAL-RDANGIKDYDVIWFEDHLDDILVPKPVA 445
BLAST of mRNA_E_fasciculatus_S2_contig9610.17625.1 vs.
Match: NYN (domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DRX1_EMIHU) HSP 1 Score: 216 bits (551), Expect = 2.020e-60 Identity = 104/198 (52.53%), Postives = 138/198 (69.70%), Query Frame = 1
Query: 547 SPEESMDAAAKLSVPLKVMVFIDGTWLFYSFFGRGERCHVSAKLGPGWVYEYNVMWERLPVIISRAVHAQLARHGQSARLVEVVRSVVFSSARKDTDKDSTRMRMFDAMREKNFEVHMATTIGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFEP 1140
S E ++ A + PL+VMVF+DG+WL+YSF GR C V + G GW + +V ++RLP +IS+ +H QL R + R VE+ R++VF+S R DT + S RM MF M FEVH+ TT G+QEKCIDI+LAVEMMHYA+IP YD+ VL++GDKDF+PAM+R RQKG+ V LCSMRN C++ LL +AH P
Sbjct: 49 SAESGLEYQAS-AFPLRVMVFVDGSWLYYSFHGRRPNCPVQQRYGDGWAFSNSVAFDRLPYLISQHIHQQLLRRYGTRRFVEITRTMVFTSYRADTHRRSLRMSMFRQMAAAGFEVHVRTTTGLQEKCIDISLAVEMMHYASIPGAYDIAVLISGDKDFIPAMSRIRQKGKSVALCSMRNCCSRDLLDPNAHAPSISP 245
BLAST of mRNA_E_fasciculatus_S2_contig9610.17625.1 vs.
Match: NYN (domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K3W1_GUITC) HSP 1 Score: 213 bits (542), Expect = 2.060e-60 Identity = 104/198 (52.53%), Postives = 135/198 (68.18%), Query Frame = 1
Query: 580 LSVPLKVMVFIDGTWLFYSFFGRGE-RCHVSAKLGPGWVYEYNVMWERLPVIISRAVHAQLARHGQSARLVEVVRSVVFSSARKDTDKDSTRMRMFDAMREKNFEVHMATTIGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFEPIWINEYLDDL 1170
+ VP+KVM+FIDGTWLFYSFF RG+ RC K G W+ ++++ W L I + L R V+V+R +VF S R T S R+RMF M NFEVH+ T G QEKC+DI+LAV+MMHYA++ D YD VL+TGDKDFMPAM+R +QKG+RV L SMRNSCN+ LL +HV DFEPI+I++ +D +
Sbjct: 122 MPVPIKVMIFIDGTWLFYSFFSRGQSRCPFIKKFGTNWIEDFSIDWAELQAFIRETLQRHLP-----GRFVDVMRVIVFGSVRSGTHPSSLRVRMFQEMDRSNFEVHLLTHTGGQEKCVDISLAVDMMHYASLQDGYDACVLMTGDKDFMPAMSRVKQKGKRVFLASMRNSCNRDLLDRSSHVYDFEPIFIDDAIDRI 314
BLAST of mRNA_E_fasciculatus_S2_contig9610.17625.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6D8_9STRA) HSP 1 Score: 208 bits (529), Expect = 6.540e-58 Identity = 91/195 (46.67%), Postives = 134/195 (68.72%), Query Frame = 1
Query: 589 PLKVMVFIDGTWLFYSFFGRGERCHVSAKLGPGWVYEYNVMWERLPVIISRAVHAQLARHGQSARLVEVVRSVVFSSARKDTDKDSTRMRMFDAMREKNFEVHMATTIGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFEPIWINEYLDDLM 1173
PL+ M+F+DGTWL+Y RG C ++ + G W + + W RLP +I R++ +L R G S ++V+VV++VVF+S RK+T S R+R F M+ +F+V+MATT G QEKC+DIALAVEMMHYA IP YD+ +LVTGD DF PAM R R++G+RV L + R CN A+++ H+ D+ P+++ +L + +
Sbjct: 52 PLRTMIFVDGTWLYYCMHERGSSCPITFQFGDAWEQSHTIDWSRLPALIGRSIEEELVRRGGSRQVVDVVKTVVFTSVRKETGHQSKRVRFFQGMQAAHFDVNMATTPGPQEKCVDIALAVEMMHYAHIPGAYDLALLVTGDMDFAPAMQRVREQGKRVALVTFRQWCNAAMVQPGVHLSDYSPVFLENHLSEFI 246
BLAST of mRNA_E_fasciculatus_S2_contig9610.17625.1 vs.
Match: SAP (domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XLV7_DIALT) HSP 1 Score: 209 bits (533), Expect = 2.950e-57 Identity = 99/211 (46.92%), Postives = 144/211 (68.25%), Query Frame = 1
Query: 541 AVSPEESMDAAAKLSVPLKVMVFIDGTWLFYSFFGRGERCHVSAKLGPGWVYEYNVMWERLPVIISRAVHAQLARHGQSARLVEVVRSVVFSSARKDTDKDSTRMRMFDAMREKNFEVHMATTIGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQALLRDDAHVMDFEPIWINEYLDDLM 1173
A +P ++ PLK M+F+DGTWL+YS F RG+RC + + GPGW + V +LP +I+ + QL+ + R VEVVR++VF+S R+D D R+ +F M++ FEVH+ + G QEKC+DIALAVE++HYAT+PD YD+GVLV+GD+DF+PA+ R RQ+GRRV + SMRNSCN+ H+ DF+ IW+++ L+ L+
Sbjct: 59 ARAPWHLAQVPVAVAPPLKAMLFVDGTWLYYSLFERGDRCVIRERFGPGWQATHCVDVSQLPPMIAEDIATQLSETLLTPRGVEVVRTLVFTSYREDVQSDQ-RVTLFQQMQDLLFEVHLGSFHGSQEKCVDIALAVELLHYATVPDAYDIGVLVSGDRDFIPALVRARQRGRRVAIASMRNSCNREFSDPSIHIKDFDTIWLDDQLERLI 268
BLAST of mRNA_E_fasciculatus_S2_contig9610.17625.1 vs.
Match: NYN (domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LQY1_9EUKA) HSP 1 Score: 194 bits (494), Expect = 4.410e-57 Identity = 96/173 (55.49%), Postives = 128/173 (73.99%), Query Frame = 1
Query: 586 VPLKVMVFIDGTWLFYSFFGRGERCHVSAKLGPGWVYEYNVMWERLPVIISRAVHAQLARHGQSA-RLVEVVRSVVFSSARKD-TDKDSTRMRMFDAMREKNFEVHMATTIGVQEKCIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNSCNQ 1098
+P KVMVFIDGTWL+Y FG G+ C ++ + G GW Y++ + RLP +IS V A+L R A R VEVVR +VFSS R D + S R RMF AM+E ++EVH+ G QEKC+DIALAV+M+HYAT+P+ +DV VLV+GD+DF+PA+ RTRQKG+RVC+CSMR+S ++
Sbjct: 9 IPTKVMVFIDGTWLYYQLFGNGKHCKLTQRYGDGWGDRYHIDYSRLPQLISDHVSAELMRTQPYAQRAVEVVRVLVFSSFRADEAELISPRQRMFRAMQELHYEVHLGDFAGGQEKCVDIALAVDMLHYATVPNAFDVAVLVSGDRDFIPALVRTRQKGKRVCVCSMRDSASK 181 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9610.17625.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9610.17625.1 >prot_E_fasciculatus_S2_contig9610.17625.1 ID=prot_E_fasciculatus_S2_contig9610.17625.1|Name=mRNA_E_fasciculatus_S2_contig9610.17625.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=398bp PAPTHTHERVGMPLPSDSQRRRGRLQSWRGSVSGSGILIGLQLLARGADGback to top mRNA from alignment at E_fasciculatus_S2_contig9610:348..3817- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9610.17625.1 ID=mRNA_E_fasciculatus_S2_contig9610.17625.1|Name=mRNA_E_fasciculatus_S2_contig9610.17625.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3470bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9610:348..3817- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9610:348..3817- >mRNA_E_fasciculatus_S2_contig9610.17625.1 ID=mRNA_E_fasciculatus_S2_contig9610.17625.1|Name=mRNA_E_fasciculatus_S2_contig9610.17625.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1194bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9610:348..3817- (Ectocarpus fasciculatus EfasUO2)back to top |