mRNA_E_fasciculatus_S2_contig9597.17613.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9597.17613.1
Unique NamemRNA_E_fasciculatus_S2_contig9597.17613.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9597.17613.1 vs.
Match: Cytochrome (c biogenesis protein CcsB n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=A0A6G6D7H5_ECTSI)

HSP 1 Score: 823 bits (2125), Expect = 1.370e-300
Identity = 424/429 (98.83%), Postives = 428/429 (99.77%), Query Frame = 1
Query:    1 MIKRFFKYLANLKLAIIILLIISLVISIGTIIEQNKEILFYQKNYSTLIFNLPLWKIILFLGLNNIYSTWWFLLLLGILGLSLACCTMIQQLPTLKFSRRYYFYKQVNQYKKLQIKINAIKVFPSHLSHTLLDKEYSLFQQSNSFYAYKGLISRIGPIVVHLSIICVLLGSTLGALKGFNSQELIPKTELFHIQNVIKNGFFSSIPQKTFRVNDFWSIYTPSGLIKQFYTDISILNGGGKEIQRKTISVNNPLLLKDLIIYQTDWGILGLRLKYTNDSISKLILQLPISKINTSNQKIWISSLPNVGKNSTSFIVLIKDNRGQISLYNNEGKFIKSTNIGDMIYNTDLIGLNLIDIISSTGIQIKCDPGIQLIYFGFFFLIFSSLISYISFSEFWLLYFPFKVISGGRTNRAKVKYNLEFLNFKQSFFS 1287
            MIKRFFKYLANLKLAIIILLIISLVISIGTIIEQNKEILFYQKNYS LIFNLPLWK+ILFLGLNNIYSTWWFLLLLGILGLSLACCTMIQQLPTLKFSRRYYFYKQVNQYKKLQIKINAIKVFPSHLSHTLLDKEYSLFQQSNSFYAYKGLISRIGPIVVHLSIICVLLGSTLGALKGFNSQELIPKTELFHIQNVIKNGFFSSIPQKTFRVNDFWSIYTPSGLIKQFYTDISILNGGGKEIQRKTISVNNPLLLKDLIIYQTDWGILGLRLKYTNDSISKLILQLPISKINTSNQKIWISSLP+VGKNSTSFIVLIKDNRGQ+SLYNNEGKFIKSTNIGDMIYNTDL+GLNLIDIISSTGIQIKCDPGIQLIYFGFFFLIFSSLISYISFSEFWLLYFPFKVISGGRTNRAKVKYNLEFLNFKQSFFS
Sbjct:    1 MIKRFFKYLANLKLAIIILLIISLVISIGTIIEQNKEILFYQKNYSALIFNLPLWKVILFLGLNNIYSTWWFLLLLGILGLSLACCTMIQQLPTLKFSRRYYFYKQVNQYKKLQIKINAIKVFPSHLSHTLLDKEYSLFQQSNSFYAYKGLISRIGPIVVHLSIICVLLGSTLGALKGFNSQELIPKTELFHIQNVIKNGFFSSIPQKTFRVNDFWSIYTPSGLIKQFYTDISILNGGGKEIQRKTISVNNPLLLKDLIIYQTDWGILGLRLKYTNDSISKLILQLPISKINTSNQKIWISSLPSVGKNSTSFIVLIKDNRGQVSLYNNEGKFIKSTNIGDMIYNTDLMGLNLIDIISSTGIQIKCDPGIQLIYFGFFFLIFSSLISYISFSEFWLLYFPFKVISGGRTNRAKVKYNLEFLNFKQSFFS 429          
BLAST of mRNA_E_fasciculatus_S2_contig9597.17613.1 vs.
Match: Cytochrome (c biogenesis protein CcsB n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EXL7_9PHAE)

HSP 1 Score: 753 bits (1945), Expect = 3.670e-273
Identity = 384/428 (89.72%), Postives = 406/428 (94.86%), Query Frame = 1
Query:    1 MIKRFFKYLANLKLAIIILLIISLVISIGTIIEQNKEILFYQKNYSTLIFNLPLWKIILFLGLNNIYSTWWFLLLLGILGLSLACCTMIQQLPTLKFSRRYYFYKQVNQYKKLQIKINAIKVFPSHLSHTLLDKEYSLFQQSNSFYAYKGLISRIGPIVVHLSIICVLLGSTLGALKGFNSQELIPKTELFHIQNVIKNGFFSSIPQKTFRVNDFWSIYTPSGLIKQFYTDISILNGGGKEIQRKTISVNNPLLLKDLIIYQTDWGILGLRLKYTNDSISKLILQLPISKINTSNQKIWISSLPNVGKNSTSFIVLIKDNRGQISLYNNEGKFIKSTNIGDMIYNTDLIGLNLIDIISSTGIQIKCDPGIQLIYFGFFFLIFSSLISYISFSEFWLLYFPFKVISGGRTNRAKVKYNLEFLNFKQSFF 1284
            MIKRFFKYLANLKLAI+ILL+ISLVISIGTIIEQNKEI+FYQKNYSTLIFNLPLW+I+LF GLNNIYS WWF  LLG+LGLSLACCT+IQQLPTLKFSRRYYFYKQ+NQY KLQ KINAIKVFPSHLSHTLL+K+YSLFQQSNSFYAYKGLISR+GPIVVHLSIIC+L GSTLGALKGFNSQELIPKTE+FHIQNVIKNGFFSSI QKTFRVNDFWSIYT +GLIKQFYTD SILNG GKEIQRKTISVNNPLLLKDLIIYQTDWGILGLRLKY  D+ S++ LQLPISKINTSNQKIWISSLP+V KN+ SFIVLIKDNRGQISLYNNEGKFIKS+NIGDMIYN D IGLNLID+ISSTGIQIK DPGIQLIYFGFFFLIFSSLISYISFSEFWLLY P KVISGG+TNRAKVKYNLEFLNFKQSFF
Sbjct:    1 MIKRFFKYLANLKLAILILLVISLVISIGTIIEQNKEIIFYQKNYSTLIFNLPLWRILLFFGLNNIYSAWWFFFLLGLLGLSLACCTIIQQLPTLKFSRRYYFYKQINQYNKLQTKINAIKVFPSHLSHTLLNKQYSLFQQSNSFYAYKGLISRVGPIVVHLSIICILAGSTLGALKGFNSQELIPKTEVFHIQNVIKNGFFSSINQKTFRVNDFWSIYTTNGLIKQFYTDFSILNGNGKEIQRKTISVNNPLLLKDLIIYQTDWGILGLRLKYFKDNTSRVSLQLPISKINTSNQKIWISSLPSVQKNTNSFIVLIKDNRGQISLYNNEGKFIKSSNIGDMIYNIDNIGLNLIDVISSTGIQIKSDPGIQLIYFGFFFLIFSSLISYISFSEFWLLYSPMKVISGGKTNRAKVKYNLEFLNFKQSFF 428          
BLAST of mRNA_E_fasciculatus_S2_contig9597.17613.1 vs.
Match: Cytochrome (c biogenesis protein CcsB n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A344PF95_9PHAE)

HSP 1 Score: 744 bits (1922), Expect = 1.170e-269
Identity = 372/428 (86.92%), Postives = 410/428 (95.79%), Query Frame = 1
Query:    1 MIKRFFKYLANLKLAIIILLIISLVISIGTIIEQNKEILFYQKNYSTLIFNLPLWKIILFLGLNNIYSTWWFLLLLGILGLSLACCTMIQQLPTLKFSRRYYFYKQVNQYKKLQIKINAIKVFPSHLSHTLLDKEYSLFQQSNSFYAYKGLISRIGPIVVHLSIICVLLGSTLGALKGFNSQELIPKTELFHIQNVIKNGFFSSIPQKTFRVNDFWSIYTPSGLIKQFYTDISILNGGGKEIQRKTISVNNPLLLKDLIIYQTDWGILGLRLKYTNDSISKLILQLPISKINTSNQKIWISSLPNVGKNSTSFIVLIKDNRGQISLYNNEGKFIKSTNIGDMIYNTDLIGLNLIDIISSTGIQIKCDPGIQLIYFGFFFLIFSSLISYISFSEFWLLYFPFKVISGGRTNRAKVKYNLEFLNFKQSFF 1284
            MIKRFFKYLANLKLAI+ILL+IS+VISIGT+IEQN+EILFYQK+YSTLIF +P+WKI+LF GLNNIYSTWWFLLLLG+LGLSLACCT+IQQLPTLKFSRRYYFYKQ+NQY KLQIKINAIKVFPSHL HTLL+K+YSLFQQ+NSFYAYKGLISR+GPI+VHLSIICVLLGSTLGALKGFNSQELIPKTE+FHIQN+IKNG FSS+PQKTFRVNDFWSIYT +GLIKQFYTD+SILNG GKE+QRKTISVNNPLLL+DLIIYQTDWGILGLRLKY  ++ SK+ LQLPISKINTSNQKIWISSLP++ K+  SFI+LIKDNRGQISLYNNEGKF+KS+NIGD++YNTD I LNLID+ISSTGIQIK DPGI+LIYFGFFFLIFSSLISYISFSEFWLLYFP KVISGG+TNRAKVKYNLEFLNFKQSFF
Sbjct:    1 MIKRFFKYLANLKLAILILLVISVVISIGTVIEQNREILFYQKSYSTLIFTVPVWKILLFFGLNNIYSTWWFLLLLGLLGLSLACCTIIQQLPTLKFSRRYYFYKQINQYNKLQIKINAIKVFPSHLGHTLLNKQYSLFQQANSFYAYKGLISRVGPIIVHLSIICVLLGSTLGALKGFNSQELIPKTEVFHIQNLIKNGVFSSVPQKTFRVNDFWSIYTSNGLIKQFYTDLSILNGQGKEVQRKTISVNNPLLLQDLIIYQTDWGILGLRLKYIKNTTSKISLQLPISKINTSNQKIWISSLPSIQKDKKSFIILIKDNRGQISLYNNEGKFLKSSNIGDILYNTDSIDLNLIDVISSTGIQIKSDPGIKLIYFGFFFLIFSSLISYISFSEFWLLYFPLKVISGGKTNRAKVKYNLEFLNFKQSFF 428          
BLAST of mRNA_E_fasciculatus_S2_contig9597.17613.1 vs.
Match: Cytochrome (c biogenesis protein Ccs1 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVB8_9PHAE)

HSP 1 Score: 738 bits (1904), Expect = 6.460e-267
Identity = 371/429 (86.48%), Postives = 407/429 (94.87%), Query Frame = 1
Query:    1 MIKRFFKYLANLKLAIIILLIISLVISIGTIIEQNKEILFYQKNYSTLIFNLPLWKIILFLGLNNIYSTWWFLLLLGILGLSLACCTMIQQLPTLKFSRRYYFYKQVNQYKKLQIKINAIKVFPSHLSHTLLDKEYSLFQQSNSFYAYKGLISRIGPIVVHLSIICVLLGSTLGALKGFNSQELIPKTELFHIQNVIKNGFFSSIPQKTFRVNDFWSIYTPSGLIKQFYTDISILNGGGKEIQRKTISVNNPLLLKDLIIYQTDWGILGLRLKYTNDSISKLILQLPISKINTSNQKIWISSLPNVGKNSTSFIVLIKDNRGQISLYNNEGKFIKSTNIGDMIYNTDLIGLNLIDIISSTGIQIKCDPGIQLIYFGFFFLIFSSLISYISFSEFWLLYFPFKVISGGRTNRAKVKYNLEFLNFKQSFFS 1287
            MIK FFKYLANLKLAI+ILL+IS+VI IGTIIEQNKE+LFYQKNYS LIF++PLWKIILFLG +NIYSTWWFLLLL ILGLSLACCT+IQQLPTLKFSRRYYFYKQ+NQY KLQ+KINAIKVFPSHLSHTLL+K+YSLFQQ NSFYAYKGLISR+GPIVVH+SIICVLLGST+GAL GFNSQELIPKTE+FHIQNVIKNGFFSSIPQKTFR+NDFWSIYT +GLIKQFY+DISILNGGGKE+QRKTISVNNPLLLK+LI+YQTDWGILGLRLKY     SK+ LQLPISKINTSNQK+WISS+P+V KN+ SFIVLIKDNRGQI+LYNNEGKFIKS+NIGD+IY+TD+IGL L+DIISSTGIQIK DPGIQLIYFGFFFL+ SSLISYISFSEFWLLYFP KVISGG+TNRAKVKYNLEFL FKQSFF+
Sbjct:    1 MIKHFFKYLANLKLAILILLVISVVIGIGTIIEQNKELLFYQKNYSILIFSIPLWKIILFLGFDNIYSTWWFLLLLSILGLSLACCTIIQQLPTLKFSRRYYFYKQINQYNKLQVKINAIKVFPSHLSHTLLNKQYSLFQQFNSFYAYKGLISRVGPIVVHISIICVLLGSTVGALTGFNSQELIPKTEVFHIQNVIKNGFFSSIPQKTFRINDFWSIYTTNGLIKQFYSDISILNGGGKELQRKTISVNNPLLLKELIVYQTDWGILGLRLKYIKKDTSKINLQLPISKINTSNQKLWISSIPSVQKNNKSFIVLIKDNRGQINLYNNEGKFIKSSNIGDIIYSTDVIGLTLMDIISSTGIQIKSDPGIQLIYFGFFFLMLSSLISYISFSEFWLLYFPLKVISGGKTNRAKVKYNLEFLQFKQSFFN 429          
BLAST of mRNA_E_fasciculatus_S2_contig9597.17613.1 vs.
Match: Cytochrome (c biogenesis protein CcsB n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7S4_9PHAE)

HSP 1 Score: 701 bits (1809), Expect = 1.830e-252
Identity = 353/428 (82.48%), Postives = 389/428 (90.89%), Query Frame = 1
Query:    1 MIKRFFKYLANLKLAIIILLIISLVISIGTIIEQNKEILFYQKNYSTLIFNLPLWKIILFLGLNNIYSTWWFLLLLGILGLSLACCTMIQQLPTLKFSRRYYFYKQVNQYKKLQIKINAIKVFPSHLSHTLLDKEYSLFQQSNSFYAYKGLISRIGPIVVHLSIICVLLGSTLGALKGFNSQELIPKTELFHIQNVIKNGFFSSIPQKTFRVNDFWSIYTPSGLIKQFYTDISILNGGGKEIQRKTISVNNPLLLKDLIIYQTDWGILGLRLKYTNDSISKLILQLPISKINTSNQKIWISSLPNVGKNSTSFIVLIKDNRGQISLYNNEGKFIKSTNIGDMIYNTDLIGLNLIDIISSTGIQIKCDPGIQLIYFGFFFLIFSSLISYISFSEFWLLYFPFKVISGGRTNRAKVKYNLEFLNFKQSFF 1284
            MIKRFF+YLANLKLAI+ILL I++V SIG++IEQ++E+ FYQ+NY TLI  +P WKI+LFLG NNIYSTWWFLLLL +LGLSLACCT++QQLPTLKFSRRYYFYKQVNQY KL  KI AIKVFPSHLS+TLL K+YSLFQQSNSFYAYKGLISR+GPI+VHLSIICVLLGS+LGALKGFNSQELIPKTE+FHIQNVIKNGFFSSIPQKTFR+NDFWSIYT +G IKQFYTD+S+LNG G E+QRKTISVNNPLLL DLIIYQTDWGILGLRLKY  +  S + +QLPISKINTSNQKIWISSLPN  K+  SFIVLIKDNRGQISLYNN+GKF+KS NIGD IYNTD I  NL DIISSTG+QIK DPGI+LIYFGF FL+FSSLISYISFSEFWLLYFP KVISGG+TNRAKVKYNLEFL FKQSFF
Sbjct:    1 MIKRFFRYLANLKLAIVILLAIAIVTSIGSVIEQSREVSFYQQNYPTLILTIPFWKILLFLGFNNIYSTWWFLLLLSLLGLSLACCTVLQQLPTLKFSRRYYFYKQVNQYNKLTFKIKAIKVFPSHLSYTLLQKQYSLFQQSNSFYAYKGLISRVGPIIVHLSIICVLLGSSLGALKGFNSQELIPKTEVFHIQNVIKNGFFSSIPQKTFRINDFWSIYTSNGSIKQFYTDVSVLNGHGIEVQRKTISVNNPLLLNDLIIYQTDWGILGLRLKYNKNGTSWVSVQLPISKINTSNQKIWISSLPNRQKDGKSFIVLIKDNRGQISLYNNDGKFVKSINIGDNIYNTDSISFNLADIISSTGVQIKSDPGIKLIYFGFLFLMFSSLISYISFSEFWLLYFPTKVISGGKTNRAKVKYNLEFLKFKQSFF 428          
BLAST of mRNA_E_fasciculatus_S2_contig9597.17613.1 vs.
Match: Cytochrome (c biogenesis protein CcsB n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9K1_9PHAE)

HSP 1 Score: 696 bits (1797), Expect = 1.320e-250
Identity = 351/429 (81.82%), Postives = 393/429 (91.61%), Query Frame = 1
Query:    1 MIKRFFKYLANLKLAIIILLIISLVISIGTIIEQNKEILFYQKNYSTLIFNLPLWKIILFLGLNNIYSTWWFLLLLGILGLSLACCTMIQQLPTLKFSRRYYFYKQVNQYKKLQIKINAIKVFPSHLSHTLLDKEYSLFQQSNSFYAYKGLISRIGPIVVHLSIICVLLGSTLGALKGFNSQELIPKTELFHIQNVIKNGFFSSIPQKTFRVNDFWSIYTPSGLIKQFYTDISILNGGGKEIQRKTISVNNPLLLKDLIIYQTDWGILGLRLKYTNDSISKLILQLPISKINTSNQKIWISSLPNVGKNSTSFIVLIKDNRGQISLYNNEGKFIKSTNIGDMIYNTDLIGLNLIDIISSTGIQIKCDPGIQLIYFGFFFLIFSSLISYISFSEFWLLYFPFKVISGGRTNRAKVKYNLEFLNFKQSFFS 1287
            MIKRFFKYLANLKLAI+IL++I+L+ SIG+I+EQ+K+ILFYQKNYSTLIFN+P WKI+LFLG NNIYSTWWFLLLLGILGLSLACCT++QQLPTLKFSRRYYFYKQVNQYKKL  KI AIKVFPSHLS+TLL KEYSLFQQSNSFYAYKGLISR+GPIVVHLSIIC+LLGST+GALKGFNSQELIPKTE+FHIQNVIKNGFFS IPQKTFR+NDFWSIY  +G IKQFYTDISILNG G E QRKTISVNNPLLL DLIIYQTDWGILGLRLK+   +IS + LQLPISKIN S+QKIWISSLP++ ++  +FI+LIKDNRGQISLYNN GKF+++ NIGD IY T+ + LNLIDIISSTGIQIK DPGI+LIYFGFFFL+ SSLIS+ISFSEFWLLYFP K I+GG+TNRAKVK+NLEFL  KQSFF+
Sbjct:    1 MIKRFFKYLANLKLAIVILIVIALLSSIGSIVEQSKDILFYQKNYSTLIFNIPFWKILLFLGFNNIYSTWWFLLLLGILGLSLACCTILQQLPTLKFSRRYYFYKQVNQYKKLTFKIKAIKVFPSHLSYTLLKKEYSLFQQSNSFYAYKGLISRLGPIVVHLSIICILLGSTVGALKGFNSQELIPKTEVFHIQNVIKNGFFSLIPQKTFRINDFWSIYNSTGSIKQFYTDISILNGDGTETQRKTISVNNPLLLSDLIIYQTDWGILGLRLKFIKKNISNISLQLPISKINISSQKIWISSLPDIKEDKKNFILLIKDNRGQISLYNNMGKFLRTINIGDNIYQTNSLSLNLIDIISSTGIQIKSDPGIKLIYFGFFFLMLSSLISFISFSEFWLLYFPTKAIAGGKTNRAKVKFNLEFLKIKQSFFN 429          
BLAST of mRNA_E_fasciculatus_S2_contig9597.17613.1 vs.
Match: Cytochrome (c biogenesis protein CcsB n=27 Tax=Laminariales TaxID=2886 RepID=A0A516ICN0_9PHAE)

HSP 1 Score: 679 bits (1751), Expect = 1.240e-243
Identity = 345/428 (80.61%), Postives = 382/428 (89.25%), Query Frame = 1
Query:    1 MIKRFFKYLANLKLAIIILLIISLVISIGTIIEQNKEILFYQKNYSTLIFNLPLWKIILFLGLNNIYSTWWFLLLLGILGLSLACCTMIQQLPTLKFSRRYYFYKQVNQYKKLQIKINAIKVFPSHLSHTLLDKEYSLFQQSNSFYAYKGLISRIGPIVVHLSIICVLLGSTLGALKGFNSQELIPKTELFHIQNVIKNGFFSSIPQKTFRVNDFWSIYTPSGLIKQFYTDISILNGGGKEIQRKTISVNNPLLLKDLIIYQTDWGILGLRLKYTNDSISKLILQLPISKINTSNQKIWISSLPNVGKNSTSFIVLIKDNRGQISLYNNEGKFIKSTNIGDMIYNTDLIGLNLIDIISSTGIQIKCDPGIQLIYFGFFFLIFSSLISYISFSEFWLLYFPFKVISGGRTNRAKVKYNLEFLNFKQSFF 1284
            MIKR FKYLANL+LAIIILL I++V SIG+IIEQNKEILFYQ NY TLIF++P WKI+LF G +NIYSTWWFLLLL +LGLSLACCT++QQLPTLKFSRRYYFYKQVNQY KL  KI +IKVFPSHLS+ LL KEYSLFQQSNSFYAYKGLISR+GPI+VHLSIICVLLGSTLGAL+GFNSQELIPKTE+FHIQNVIKNG FSSIPQKTFR+NDFWS YT +G IKQFYTD+S+LNG G E QRKTISVNNPLLL DLIIYQTDWGILGLRLKY  +  S + LQLPISKIN S+QKIWISSLPN  +++ SFIVLIKD+RGQISLY+N+GKF+K+ NIGD IY  DLI  N  DIISSTGIQIK DPGI+LIYFGF FL+ SSLISYISFSEFWLLYFP KVI+GG+TNRAKVK+NLEFL FKQSFF
Sbjct:    1 MIKRVFKYLANLQLAIIILLAIAIVTSIGSIIEQNKEILFYQNNYPTLIFSIPFWKILLFFGFDNIYSTWWFLLLLSLLGLSLACCTVLQQLPTLKFSRRYYFYKQVNQYNKLTFKIKSIKVFPSHLSYVLLKKEYSLFQQSNSFYAYKGLISRVGPIIVHLSIICVLLGSTLGALEGFNSQELIPKTEVFHIQNVIKNGVFSSIPQKTFRINDFWSTYTSNGSIKQFYTDVSVLNGRGGETQRKTISVNNPLLLNDLIIYQTDWGILGLRLKYVKNDNSIISLQLPISKINISSQKIWISSLPNTKQDTKSFIVLIKDHRGQISLYDNDGKFVKTINIGDTIYRNDLISFNFADIISSTGIQIKSDPGIKLIYFGFLFLMVSSLISYISFSEFWLLYFPTKVIAGGKTNRAKVKFNLEFLKFKQSFF 428          
BLAST of mRNA_E_fasciculatus_S2_contig9597.17613.1 vs.
Match: Cytochrome (c biogenesis protein CcsB n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FBU9_9PHAE)

HSP 1 Score: 659 bits (1700), Expect = 8.020e-236
Identity = 333/429 (77.62%), Postives = 375/429 (87.41%), Query Frame = 1
Query:    1 MIKRFFKYLANLKLAIIILLIISLVISIGTIIEQNKEILFYQKNYSTLIFNLPLWKIILFLGLNNIYSTWWFLLLLGILGLSLACCTMIQQLPTLKFSRRYYFYKQVNQYKKLQIKINAIKVFPSHLSHTLLDKEYSLFQQSNSFYAYKGLISRIGPIVVHLSIICVLLGSTLGALKGFNSQELIPKTELFHIQNVIKNGFFSSIPQKTFRVNDFWSIYTPSGLIKQFYTDISILNGGGKEIQRKTISVNNPLLLKDLIIYQTDWGILGLRLKYTNDSISKLILQLPISKINTSNQKIWISSLPNVGKNSTSFIVLIKDNRGQISLYNNEGKFIKSTNIGDMIYNTDLIGLNLIDIISSTGIQIKCDPGIQLIYFGFFFLIFSSLISYISFSEFWLLYFPFKVISGGRTNRAKVKYNLEFLNFKQSFFS 1287
            M+KRF ++LANLKLAIIILL+I+LV SIG++IEQ+K+I FYQ NYS L+FN+P WK+ILFLGLNNIYSTWWFL LLG LGLSLA CT++QQLPTLKFSRRYYFYKQVNQY KL  K N IKVFPSHLS+ L+ K+YSLFQQSNSFYAYKGLISRIGPI+VHLSIICVLLG TLGAL GFNSQELIPKTE+FHIQN+IK GFFSSIPQKTFR+NDFWS+YT +G IKQFYTDIS+LNG G EI+RKTISVNNPLLL +LIIYQTDWGILGLRLKY    IS++ LQLPISKIN SNQK WISSLP + +++ + IVLIKDNRGQI+LYNNEGKF+++ NIGD I  TDLI   L      TGIQIK DPGI+LIYFGFF L+FSSLISYISFSEFWLLY P K ISGG+TNRAKVKYNLEFL F+QSFF+
Sbjct:    1 MVKRFIRFLANLKLAIIILLVIALVSSIGSVIEQSKDIQFYQSNYSILLFNIPFWKVILFLGLNNIYSTWWFLFLLGFLGLSLASCTILQQLPTLKFSRRYYFYKQVNQYNKLPFKTNRIKVFPSHLSYALITKQYSLFQQSNSFYAYKGLISRIGPIIVHLSIICVLLGGTLGALNGFNSQELIPKTEVFHIQNIIKTGFFSSIPQKTFRINDFWSLYTSNGDIKQFYTDISVLNGNGSEIKRKTISVNNPLLLSNLIIYQTDWGILGLRLKYIKKDISEINLQLPISKINNSNQKFWISSLPGIKQSTKNMIVLIKDNRGQINLYNNEGKFVENINIGDNINITDLISFTLTXXXXXTGIQIKSDPGIKLIYFGFFCLMFSSLISYISFSEFWLLYLPKKAISGGKTNRAKVKYNLEFLKFQQSFFN 429          
BLAST of mRNA_E_fasciculatus_S2_contig9597.17613.1 vs.
Match: Cytochrome (c biogenesis protein CcsB n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPS3_9PHAE)

HSP 1 Score: 635 bits (1638), Expect = 2.620e-226
Identity = 321/429 (74.83%), Postives = 372/429 (86.71%), Query Frame = 1
Query:    1 MIKRFFKYLANLKLAIIILLIISLVISIGTIIEQNKEILFYQKNYSTLIFNLPLWKIILFLGLNNIYSTWWFLLLLGILGLSLACCTMIQQLPTLKFSRRYYFYKQVNQYKKLQIKINAIKVFPSHLSHTLLDKEYSLFQQSNSFYAYKGLISRIGPIVVHLSIICVLLGSTLGALKGFNSQELIPKTELFHIQNVIKNGFFSSIPQKTFRVNDFWSIYTPSGLIKQFYTDISILNGGGKEIQRKTISVNNPLLLKDLIIYQTDWGILGLRLKYTNDSISKLILQLPISKINTSNQKIWISSLPNVGKNSTSFIVLIKDNRGQISLYNNEGKFIKSTNIGDMIYNTDLIGLNL--IDIISSTGIQIKCDPGIQLIYFGFFFLIFSSLISYISFSEFWLLYFPFKVISGGRTNRAKVKYNLEFLNFKQSF 1281
            MIKR FKYLANLKLAI+ILL+I++VISIG+ IEQNKEI FYQ  Y   IF++P WKII+FLG NNIYSTWWFL+LL + G+SLACCT++QQLPTLKFSRRYYFYKQ NQY KL   IN+ KVFP+HLS+ L++K+YSLFQQSN+FYAYKGLISRIGPI+VH+SIIC+LLGSTLG+L GFNSQE+IPKTE+FHIQN+I+NG FSSIPQKTFR+NDFWSIYT +G IKQFYTDIS+LNG G E QRKTISVNNPLLLKDLIIYQTDWGILGLRLK  + +   +I Q+PISK NT N+KIWIS+LP +  N   FI+LI+DNRGQ++LYN+EGKFIK+ NIGD + N ++   NL   DIISSTGIQIK DPGI+LIYFGFFFLI SSLISYISFSE WLLYFP K ISGG+TNRAKVK+NLEF+ FKQSF
Sbjct:    1 MIKRIFKYLANLKLAILILLLIAVVISIGSFIEQNKEIQFYQNTYLIQIFSIPFWKIIIFLGFNNIYSTWWFLILLMLFGVSLACCTILQQLPTLKFSRRYYFYKQKNQYNKLTFTINSSKVFPTHLSYNLINKQYSLFQQSNTFYAYKGLISRIGPIIVHISIICILLGSTLGSLNGFNSQEIIPKTEVFHIQNIIRNGIFSSIPQKTFRINDFWSIYTSNGFIKQFYTDISLLNGQGLETQRKTISVNNPLLLKDLIIYQTDWGILGLRLKSNSKNNPLIIYQIPISKTNTLNKKIWISALPRINNNLKRFIILIRDNRGQVTLYNSEGKFIKNINIGDNLGNENIKESNLKFTDIISSTGIQIKSDPGIKLIYFGFFFLIISSLISYISFSEVWLLYFPNKAISGGKTNRAKVKFNLEFVIFKQSF 429          
BLAST of mRNA_E_fasciculatus_S2_contig9597.17613.1 vs.
Match: Cytochrome (c biogenesis protein CcsB n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2F1R6_9PHAE)

HSP 1 Score: 563 bits (1450), Expect = 1.450e-198
Identity = 283/380 (74.47%), Postives = 330/380 (86.84%), Query Frame = 1
Query:    1 MIKRFFKYLANLKLAIIILLIISLVISIGTIIEQNKEILFYQKNYSTLIFNLPLWKIILFLGLNNIYSTWWFLLLLGILGLSLACCTMIQQLPTLKFSRRYYFYKQVNQYKKLQIKINAIKVFPSHLSHTLLDKEYSLFQQSNSFYAYKGLISRIGPIVVHLSIICVLLGSTLGALKGFNSQELIPKTELFHIQNVIKNGFFSSIPQKTFRVNDFWSIYTPSGLIKQFYTDISILNGGGKEIQRKTISVNNPLLLKDLIIYQTDWGILGLRLKYTNDSISKLILQLPISKINTSNQKIWISSLPNVGKNSTSFIVLIKDNRGQISLYNNEGKFIKSTNIGDMIYNTDLIGLNLIDIISSTGIQIKCDPGIQLIYFGFFFL 1140
            MIKR FKYLANLKLAIIILL+ISL+ISIG+IIEQNKE+ FYQ +Y   I+ +P WKIILFLG NNIY+TWWFL+LL + G SLA CT++QQLPTLKFSRRYYFYKQVNQYKKL  KIN  KVF +HLS+ L++K+YSL+QQ NS YAYKGLISR+GPI+VHLSIIC+LLGSTLG++ GFNSQELIPKTE+FHIQN+++NG FSSIPQKTFR+NDFWSIYT +GLIKQFYTDIS+LNG G E QRKTISVNNPLLLK+LIIYQTDWGILGLRLKY   + S  + Q+PISKI++SNQK+WISSLPN   +  SFI+LIKDNRGQ++LYN +GKFIK+ NIGD + N ++ G    DIISSTGIQIK DPGI+LIYFGFFFL
Sbjct:    1 MIKRVFKYLANLKLAIIILLLISLLISIGSIIEQNKEVEFYQGHYLKTIYMVPFWKIILFLGFNNIYNTWWFLVLLFLFGSSLASCTILQQLPTLKFSRRYYFYKQVNQYKKLPFKINRNKVFSTHLSYALINKQYSLYQQYNSLYAYKGLISRVGPIIVHLSIICILLGSTLGSINGFNSQELIPKTEVFHIQNIVRNGIFSSIPQKTFRINDFWSIYTSNGLIKQFYTDISVLNGQGIETQRKTISVNNPLLLKNLIIYQTDWGILGLRLKYFTKNNSLKVFQVPISKISSSNQKVWISSLPNFNSSLKSFIILIKDNRGQLTLYNIDGKFIKNINIGDNLENENVNGFKFTDIISSTGIQIKSDPGIKLIYFGFFFL 380          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9597.17613.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Cytochrome1.370e-30098.83c biogenesis protein CcsB n=2 Tax=Ectocarpus silic... [more]
Cytochrome3.670e-27389.72c biogenesis protein CcsB n=1 Tax=Cladosiphon okam... [more]
Cytochrome1.170e-26986.92c biogenesis protein CcsB n=5 Tax=Scytosiphonaceae... [more]
Cytochrome6.460e-26786.48c biogenesis protein Ccs1 n=1 Tax=Pleurocladia lac... [more]
Cytochrome1.830e-25282.48c biogenesis protein CcsB n=2 Tax=Laminariales Tax... [more]
Cytochrome1.320e-25081.82c biogenesis protein CcsB n=1 Tax=Chorda asiatica ... [more]
Cytochrome1.240e-24380.61c biogenesis protein CcsB n=27 Tax=Laminariales Ta... [more]
Cytochrome8.020e-23677.62c biogenesis protein CcsB n=1 Tax=Desmarestia acul... [more]
Cytochrome2.620e-22674.83c biogenesis protein CcsB n=3 Tax=Fucaceae TaxID=3... [more]
Cytochrome1.450e-19874.47c biogenesis protein CcsB n=14 Tax=Sargassaceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9597contigE_fasciculatus_S2_contig9597:908..2197 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score816.6
Seed ortholog evalue5.4e-234
Seed eggNOG ortholog2880.D1J782
Preferred nameccs1
Model size1290
KEGG koko:K07399
Hectar predicted targeting categorysignal anchor
Exons1
EggNOG free text desc.cytochrome complex assembly
EggNOG OGs2QRFF@2759,COG1333@1
Cds size1290
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842605.853583-CDS-E_fasciculatus_S2_contig9597:907..21971696842605.853583-CDS-E_fasciculatus_S2_contig9597:907..2197Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9597 908..2197 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9597.17613.1prot_E_fasciculatus_S2_contig9597.17613.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9597 908..2197 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9597.17613.1

>prot_E_fasciculatus_S2_contig9597.17613.1 ID=prot_E_fasciculatus_S2_contig9597.17613.1|Name=mRNA_E_fasciculatus_S2_contig9597.17613.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=430bp
MIKRFFKYLANLKLAIIILLIISLVISIGTIIEQNKEILFYQKNYSTLIF
NLPLWKIILFLGLNNIYSTWWFLLLLGILGLSLACCTMIQQLPTLKFSRR
YYFYKQVNQYKKLQIKINAIKVFPSHLSHTLLDKEYSLFQQSNSFYAYKG
LISRIGPIVVHLSIICVLLGSTLGALKGFNSQELIPKTELFHIQNVIKNG
FFSSIPQKTFRVNDFWSIYTPSGLIKQFYTDISILNGGGKEIQRKTISVN
NPLLLKDLIIYQTDWGILGLRLKYTNDSISKLILQLPISKINTSNQKIWI
SSLPNVGKNSTSFIVLIKDNRGQISLYNNEGKFIKSTNIGDMIYNTDLIG
LNLIDIISSTGIQIKCDPGIQLIYFGFFFLIFSSLISYISFSEFWLLYFP
FKVISGGRTNRAKVKYNLEFLNFKQSFFS*
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mRNA from alignment at E_fasciculatus_S2_contig9597:908..2197-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9597.17613.1 ID=mRNA_E_fasciculatus_S2_contig9597.17613.1|Name=mRNA_E_fasciculatus_S2_contig9597.17613.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1290bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9597:908..2197- (Ectocarpus fasciculatus EfasUO2)
ATGATTAAACGTTTTTTTAAATATTTAGCTAATTTAAAATTAGCTATCAT AATATTATTAATTATTTCACTAGTTATTAGTATTGGTACTATTATTGAAC AGAATAAAGAAATTCTATTTTATCAAAAAAATTATTCGACATTAATTTTT AATTTACCACTTTGGAAAATTATTTTATTTTTAGGCTTGAATAATATCTA TAGTACATGGTGGTTTTTATTATTATTAGGCATTTTAGGCCTGTCTTTAG CTTGCTGCACAATGATTCAGCAGTTACCAACCCTTAAATTTTCTCGAAGA TATTATTTTTACAAGCAAGTTAACCAATATAAAAAATTACAAATTAAAAT AAATGCAATTAAAGTTTTTCCTAGTCATTTAAGTCATACGCTATTAGATA AAGAGTATTCACTTTTTCAACAATCAAATAGTTTTTATGCTTATAAAGGA TTAATAAGCCGGATAGGTCCTATTGTTGTTCATTTAAGTATAATTTGTGT TTTATTAGGCAGTACATTAGGTGCATTAAAAGGATTTAATTCACAAGAAT TAATACCTAAAACAGAATTATTTCATATCCAAAACGTTATCAAAAATGGT TTTTTTTCTTCTATACCTCAGAAAACCTTCCGTGTGAATGATTTTTGGTC AATCTATACTCCTAGTGGTTTAATTAAACAATTTTATACGGATATCTCAA TCTTAAATGGTGGAGGAAAAGAAATTCAAAGAAAAACTATTTCCGTAAAT AATCCGTTATTATTAAAAGATTTAATAATATATCAAACCGATTGGGGAAT CCTAGGATTACGGTTAAAGTATACAAACGATAGTATTTCTAAGTTAATTT TACAATTACCTATCTCAAAAATAAACACTTCAAATCAAAAAATTTGGATA AGTTCATTACCTAATGTAGGAAAAAATAGTACAAGTTTTATTGTATTAAT TAAAGATAACCGGGGACAAATTAGTTTATATAATAATGAGGGAAAGTTTA TAAAAAGTACTAATATTGGGGATATGATATATAATACGGATTTAATAGGG TTGAATTTAATTGATATAATTTCTTCTACAGGAATACAAATAAAATGTGA CCCAGGTATTCAATTGATTTATTTTGGTTTCTTTTTTTTAATCTTTAGTA GTTTAATAAGTTATATCTCATTTTCGGAGTTTTGGTTATTATATTTTCCT TTTAAGGTAATTTCTGGTGGGAGAACTAATCGTGCTAAAGTAAAATATAA TCTAGAATTTTTAAATTTTAAGCAATCTTTTTTTAGTTAA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9597:908..2197-

>mRNA_E_fasciculatus_S2_contig9597.17613.1 ID=mRNA_E_fasciculatus_S2_contig9597.17613.1|Name=mRNA_E_fasciculatus_S2_contig9597.17613.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1290bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9597:908..2197- (Ectocarpus fasciculatus EfasUO2)
ATGATTAAACGTTTTTTTAAATATTTAGCTAATTTAAAATTAGCTATCAT
AATATTATTAATTATTTCACTAGTTATTAGTATTGGTACTATTATTGAAC
AGAATAAAGAAATTCTATTTTATCAAAAAAATTATTCGACATTAATTTTT
AATTTACCACTTTGGAAAATTATTTTATTTTTAGGCTTGAATAATATCTA
TAGTACATGGTGGTTTTTATTATTATTAGGCATTTTAGGCCTGTCTTTAG
CTTGCTGCACAATGATTCAGCAGTTACCAACCCTTAAATTTTCTCGAAGA
TATTATTTTTACAAGCAAGTTAACCAATATAAAAAATTACAAATTAAAAT
AAATGCAATTAAAGTTTTTCCTAGTCATTTAAGTCATACGCTATTAGATA
AAGAGTATTCACTTTTTCAACAATCAAATAGTTTTTATGCTTATAAAGGA
TTAATAAGCCGGATAGGTCCTATTGTTGTTCATTTAAGTATAATTTGTGT
TTTATTAGGCAGTACATTAGGTGCATTAAAAGGATTTAATTCACAAGAAT
TAATACCTAAAACAGAATTATTTCATATCCAAAACGTTATCAAAAATGGT
TTTTTTTCTTCTATACCTCAGAAAACCTTCCGTGTGAATGATTTTTGGTC
AATCTATACTCCTAGTGGTTTAATTAAACAATTTTATACGGATATCTCAA
TCTTAAATGGTGGAGGAAAAGAAATTCAAAGAAAAACTATTTCCGTAAAT
AATCCGTTATTATTAAAAGATTTAATAATATATCAAACCGATTGGGGAAT
CCTAGGATTACGGTTAAAGTATACAAACGATAGTATTTCTAAGTTAATTT
TACAATTACCTATCTCAAAAATAAACACTTCAAATCAAAAAATTTGGATA
AGTTCATTACCTAATGTAGGAAAAAATAGTACAAGTTTTATTGTATTAAT
TAAAGATAACCGGGGACAAATTAGTTTATATAATAATGAGGGAAAGTTTA
TAAAAAGTACTAATATTGGGGATATGATATATAATACGGATTTAATAGGG
TTGAATTTAATTGATATAATTTCTTCTACAGGAATACAAATAAAATGTGA
CCCAGGTATTCAATTGATTTATTTTGGTTTCTTTTTTTTAATCTTTAGTA
GTTTAATAAGTTATATCTCATTTTCGGAGTTTTGGTTATTATATTTTCCT
TTTAAGGTAATTTCTGGTGGGAGAACTAATCGTGCTAAAGTAAAATATAA
TCTAGAATTTTTAAATTTTAAGCAATCTTTTTTTAGTTAA
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