prot_E_fasciculatus_S2_contig9593.17612.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9593.17612.1
Unique Nameprot_E_fasciculatus_S2_contig9593.17612.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length108
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9593.17612.1 vs. uniprot
Match: D7FZL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZL7_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 9.220e-39
Identity = 95/108 (87.96%), Postives = 98/108 (90.74%), Query Frame = 0
Query:    1 MDASAETAALRRQLEKAVSSEDVERIGDVLNSLGKMDVTLAVLQESKVGATVSKLKKHADGGVSNSAKALVKKWKRVAEASGVQGAPXXXXXXXXXXXXXXPGSAGKG 108
            MDASAETA LRRQLEKAVS+EDVERI DVL SLGK++VTLAVLQESKVGATVSKLKKHAD  VS SAKALVKKWKRVAEASGVQG  XXXXXXXXXXXX  PGSAGKG
Sbjct:    1 MDASAETAVLRRQLEKAVSAEDVERIADVLGSLGKVEVTLAVLQESKVGATVSKLKKHADEEVSKSAKALVKKWKRVAEASGVQGXXXXXXXXXXXXXXSPPGSAGKG 108          
BLAST of mRNA_E_fasciculatus_S2_contig9593.17612.1 vs. uniprot
Match: A0A836CH25_9STRA (Transcription factor S-II-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH25_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 4.790e-17
Identity = 43/84 (51.19%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    3 ASAETAALRRQLEKAVSSEDVERIGDVLNSLGKMDVTLAVLQESKVGATVSKLKKHADGGVSNSAKALVKKWKRVAEASGVQGA 86
            A+ E A LR  +EKAV+  D  R+ D+L+ L K+D+T+ ++ ESK+G+ VSKL+KHAD  V+  AKALVK WK++A+A+GV+G+
Sbjct:    5 AAREVAELRDAMEKAVTKADAPRVCDILSQLEKVDMTVDIMAESKIGSAVSKLRKHADSRVAGQAKALVKVWKQLAQAAGVEGS 88          
BLAST of mRNA_E_fasciculatus_S2_contig9593.17612.1 vs. uniprot
Match: A0A7S2MN26_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MN26_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.210e-10
Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 0
Query:   10 LRRQLEKAVSSEDVERIGDVLNSLGKMDVTLAVLQESKVGATVSKLKKHADGGVSNSAKALVKKWKRVAEASGVQG 85
            L+  L KA  S+D ER  D+L  L ++ +TL +L  + +G  VSKLK H DG V++ AKALVKKWK++A+  GV G
Sbjct:   39 LKENLSKA--SDDKERCMDILQRLEELPMTLQLLSATLIGTVVSKLKSHKDGAVASKAKALVKKWKKLAKEGGVGG 112          
BLAST of mRNA_E_fasciculatus_S2_contig9593.17612.1 vs. uniprot
Match: K0TFD7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TFD7_THAOC)

HSP 1 Score: 65.1 bits (157), Expect = 3.190e-10
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 0
Query:   24 ERIGDVLNSLGKMDVTLAVLQESKVGATVSKLKKHADGGVSNSAKALVKKWKRVAEAS 81
            E+I D+L  L K DVTL++L E+ +GA+V+KLKKH+D  VS++A  LVKKWK VA+AS
Sbjct:   28 EKILDILERLDKTDVTLSILTETLIGASVAKLKKHSDVDVSSAAAKLVKKWKSVAKAS 85          
BLAST of mRNA_E_fasciculatus_S2_contig9593.17612.1 vs. uniprot
Match: A0A7R9WI09_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WI09_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.700e-9
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 0
Query:   22 DVERIGDVLNSLGKMDVTLAVLQESKVGATVSKLKKHADGGVSNSAKALVKKWKRVAEASGV 83
            + ERI D+L  L   D+ +AVL ++ VGA VSK+K H D  V+ +AKALVKKWK++A+  GV
Sbjct:    1 NAERILDILRRLDDADINIAVLSQTLVGAVVSKMKSHRDASVAAAAKALVKKWKKLAKEGGV 62          
BLAST of mRNA_E_fasciculatus_S2_contig9593.17612.1 vs. uniprot
Match: A0A7S2PDH7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PDH7_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.640e-9
Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 0
Query:   24 ERIGDVLNSLGKMDVTLAVLQESKVGATVSKLKKHADGGVSNSAKALVKKWKRVA 78
            E+I D+L  L K  + LAVL E+ +GA+VSKLKKH +  ++N+AK LVKKWK VA
Sbjct:   28 EKILDILQRLEKQKIDLAVLTETLIGASVSKLKKHENAEIANTAKGLVKKWKGVA 82          
BLAST of mRNA_E_fasciculatus_S2_contig9593.17612.1 vs. uniprot
Match: A0A7S2ET91_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ET91_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 3.030e-9
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   22 DVERIGDVLNSLGKMDVTLAVLQESKVGATVSKLKKHADGGVSNSAKALVKKWKRVAEASGV 83
            D ER  D+L  L ++ +TL +L E+ VG  VSKLK H D  V + AKALVKKWK++A+  GV
Sbjct:   68 DKERCLDILQRLEEVPMTLKLLSETLVGTVVSKLKSHKDAAVQSKAKALVKKWKKLAKEGGV 129          
BLAST of mRNA_E_fasciculatus_S2_contig9593.17612.1 vs. uniprot
Match: A0A7S2ETU1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ETU1_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.720e-8
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   22 DVERIGDVLNSLGKMDVTLAVLQESKVGATVSKLKKHADGGVSNSAKALVKKWKRVAEASGV 83
            D ER  D+L  L ++ +TL +L E+ VG  VSKLK H D  V + AKALVKKWK++A+  GV
Sbjct:   29 DKERCLDILQRLEEVPMTLKLLSETLVGTVVSKLKSHKDAAVQSKAKALVKKWKKLAKEGGV 90          
BLAST of mRNA_E_fasciculatus_S2_contig9593.17612.1 vs. uniprot
Match: A0A7S2PF17_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PF17_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 3.350e-8
Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 0
Query:   24 ERIGDVLNSLGKMDVTLAVLQESKVGATVSKLKKHADGGVSNSAKALVKKWKRVA 78
            E+I D+L  L K  + LAVL E+ +GA+VSKLKKH +  ++N+AK LVKKWK VA
Sbjct:   28 EKILDILQRLEKQKIDLAVLTETLIGASVSKLKKHENAEIANTAKGLVKKWKGVA 82          
BLAST of mRNA_E_fasciculatus_S2_contig9593.17612.1 vs. uniprot
Match: A0A024TW44_9STRA (Transcription elongation factor S-II n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW44_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.210e-7
Identity = 30/71 (42.25%), Postives = 52/71 (73.24%), Query Frame = 0
Query:   10 LRRQLEKAVSSEDVERIG--DVLNSLGKMDVTLAVLQESKVGATVSKLKKHADGGVSNSAKALVKKWKRVA 78
            L ++L K ++ +D ++ G  D ++ L K+D+TLA+L+++K+G T++KL+KH    VS+ AK L+KKWK +A
Sbjct:    7 LHKRLTKFLAGDDNDQNGVADAMDHLNKVDMTLAILKDTKIGQTIAKLRKHDAELVSSKAKILLKKWKTLA 77          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9593.17612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZL7_ECTSI9.220e-3987.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CH25_9STRA4.790e-1751.19Transcription factor S-II-domain-containing protei... [more]
A0A7S2MN26_9STRA1.210e-1048.68Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
K0TFD7_THAOC3.190e-1058.62Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7R9WI09_9STRA1.700e-951.61Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2PDH7_9STRA2.640e-956.36Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S2ET91_9STRA3.030e-951.61Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2ETU1_9STRA1.720e-851.61Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2PF17_9STRA3.350e-856.36Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A024TW44_9STRA1.210e-742.25Transcription elongation factor S-II n=1 Tax=Aphan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003617Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-typeSMARTSM00509TFS2_5coord: 7..80
e-value: 2.4E-12
score: 57.0
IPR017923Transcription factor IIS, N-terminalPFAMPF08711Med26coord: 28..76
e-value: 3.8E-11
score: 42.8
IPR017923Transcription factor IIS, N-terminalPROSITEPS51319TFIIS_Ncoord: 1..81
score: 17.857
IPR035441TFIIS/LEDGF domain superfamilyGENE3D1.20.930.10coord: 1..89
e-value: 3.1E-21
score: 76.9
IPR035441TFIIS/LEDGF domain superfamilySUPERFAMILY47676Conserved domain common to transcription factors TFIIS, elongin A, CRSP70coord: 6..81
NoneNo IPR availablePANTHERPTHR11477TRANSCRIPTION ELONGATION FACTOR S-IIcoord: 6..87
NoneNo IPR availablePANTHERPTHR11477:SF3TRANSCRIPTION ELONGATION FACTOR A PROTEIN 2coord: 6..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9593contigE_fasciculatus_S2_contig9593:3324..5097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9593.17612.1mRNA_E_fasciculatus_S2_contig9593.17612.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9593 3227..5097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9593.17612.1 ID=prot_E_fasciculatus_S2_contig9593.17612.1|Name=mRNA_E_fasciculatus_S2_contig9593.17612.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=108bp
MDASAETAALRRQLEKAVSSEDVERIGDVLNSLGKMDVTLAVLQESKVGA
TVSKLKKHADGGVSNSAKALVKKWKRVAEASGVQGAPSAAAGTAGKAGKA
APGSAGKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035441TFIIS/LEDGF_dom_sf
IPR017923TFIIS_N
IPR003617TFIIS/CRSP70_N_sub