mRNA_E_fasciculatus_S2_contig9591.17610.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9591.17610.1
Unique NamemRNA_E_fasciculatus_S2_contig9591.17610.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWM4_ECTSI)

HSP 1 Score: 583 bits (1502), Expect = 4.400e-201
Identity = 305/348 (87.64%), Postives = 317/348 (91.09%), Query Frame = 1
Query:   31 MLDVSLEVLAATCARRVAGDKLEEASEALRNAQDARAELEQXXXXXXXXXXXXXXXXVAEKAKAEQVAPRWIGDDQSNPTEFGGKYNELPGNMEELEAVIEDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLIAAKKRQLALMNGDAQGNGPQQRRRIS 1074
            MLDVSLEVLAATCARRVAGDKLEEASEALRNAQ+ARA+LEQ                +AEK KAE VAPRWI DDQSN TEFG KY+ELP N+ +L+AVIEDLTEDLSGSVHNPQVI KYQKLKEETE  RKALSELVEGNLNANERMNSIRTPW+EKLQDMVAQLN+LFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKMAVLN RVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDIT+IVI NGVNTIKGTEEHSM+K IAAKKRQ AL +GDAQGNGPQQRRRIS
Sbjct:    1 MLDVSLEVLAATCARRVAGDKLEEASEALRNAQEARADLEQKVKELKAQKSQYHKQFLAEKRKAEHVAPRWIDDDQSNLTEFGEKYSELPDNVLQLDAVIEDLTEDLSGSVHNPQVIKKYQKLKEETETARKALSELVEGNLNANERMNSIRTPWKEKLQDMVAQLNELFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKMAVLNARVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITVIVIMNGVNTIKGTEEHSMQKFIAAKKRQRALKDGDAQGNGPQQRRRIS 348          
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJB3_9PHAE)

HSP 1 Score: 591 bits (1523), Expect = 2.660e-193
Identity = 310/358 (86.59%), Postives = 324/358 (90.50%), Query Frame = 1
Query:    1 VKKAQEHASAMLDVSLEVLAATCARRVAGDKLEEASEALRNAQDARAELEQXXXXXXXXXXXXXXXXVAEKAKAEQVAPRWIGDDQSNPTEFGGKYNELPGNMEELEAVIEDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLIAAKKRQLALMNGDAQGNGPQQRRRIS 1074
            +K+AQE ASAML+VSLEVLAATCARRVAGDKLEE SEALRNAQDARA++EQ                +AEK KAE VAPRWI DDQSN TEFG KY ELP N+ +L+AVIEDLTEDLSGSVHNPQVI KYQKLKEET+ TRKALSELV GNLNANERMNSIRTPW+EKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGK+AVLN RVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVI NGVNTIKGTEEHSM+K IAAKKRQ AL +GDAQGNGPQQRRRIS
Sbjct:  774 LKEAQEQASAMLEVSLEVLAATCARRVAGDKLEETSEALRNAQDARADMEQKVKELKAKKSQFHKQFLAEKKKAEHVAPRWIDDDQSNLTEFGEKYGELPDNVLQLDAVIEDLTEDLSGSVHNPQVIQKYQKLKEETDTTRKALSELVAGNLNANERMNSIRTPWKEKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKVAVLNARVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVIMNGVNTIKGTEEHSMQKFIAAKKRQRALQDGDAQGNGPQQRRRIS 1131          
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDV9_9PHAE)

HSP 1 Score: 322 bits (826), Expect = 1.710e-101
Identity = 175/220 (79.55%), Postives = 184/220 (83.64%), Query Frame = 1
Query:  397 LKEETEATRKALSELVEGNLNAN--ERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLIAAKKRQLALMNGDAQGNG 1050
            LKEET A RKALSELVEGN NAN  +RMNSI  PW+EKLQ +V +LNDLF EYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGK+AVLNQRVHS GERSVST LFLMALQDLQHSPFR V               FSRIVLNSCGPSRKQY LITP+LLQGLVAM+NDD+TIIVI NGVNTIKGTEEHSMK LIAAKKRQ AL +  AQ NG
Sbjct:   18 LKEETVAVRKALSELVEGNANANASKRMNSINAPWKEKLQCVVDRLNDLFMEYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKVAVLNQRVHSWGERSVSTTLFLMALQDLQHSPFRAV---------------FSRIVLNSCGPSRKQYILITPQLLQGLVAMENDDVTIIVIMNGVNTIKGTEEHSMKNLIAAKKRQRALRDLGAQENG 222          
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC8_9STRA)

HSP 1 Score: 201 bits (510), Expect = 2.990e-55
Identity = 110/238 (46.22%), Postives = 148/238 (62.18%), Query Frame = 1
Query:  292 ELPGNMEELEAVIEDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRL---AEDESSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLI 996
            + P N++ +E  I          V NP+VIN+Y           + L  L + N     ++ ++R P+  +L+  + +LN  F  YM +M GCGGEV L    +    + KWGI I+VRFR+  D   + +L++ +HSGGERSVSTIL+LMA+QDLQ SPFRVVDE+NQGMD  NER VFSRIV NSC    KQ+FLITPKLLQGL+AMDN  +T+  I NG + + G    SM+ L+
Sbjct:    7 QYPDNVDIVEEEINTCEXXXXNCVDNPEVINRYNAGLARITELEQRLEILNDSNEEEARKVAAVRNPFVTRLEHTINELNKRFSAYMEQM-GCGGEVELLNKGDTYGDYGKWGIAIKVRFRNRTDEDMLKILDKEIHSGGERSVSTILYLMAMQDLQSSPFRVVDEVNQGMDAHNERLVFSRIVRNSCRTDCKQFFLITPKLLQGLIAMDNPFVTVHFILNGPHALNGQHPFSMRDLV 243          
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CV35_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.150e-53
Identity = 124/294 (42.18%), Postives = 175/294 (59.52%), Query Frame = 1
Query:  211 KAKAEQVAPRWIGDDQSNPTEFGGKYNELPGNME------ELEAVIEDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSC----GPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLIAAKKRQLALMNGDAQGNGPQQR 1062
            K + E+ A  +  D   N TE  G++ +L G++E      ELEA +ED          NP VI KYQ+ K E     K LS++   + +  +    ++  W  +++ ++  +N LF EYM+ + G  G V + ED+S + KWG++I++ FR +   G+M  L++  HSGGERSV+TI+FLMALQD   SPFRVVDEINQGMD  NERQVF RIV NS     GP R QYFLITPKLLQGL AM+ +D+T+  + NG   IK   + ++ + I  +K     +N  A G+  Q+R
Sbjct:   23 KIETEEFARLY--DAAGNCTELAGRFAQLSGDLENLETRGELEAQMEDEQNSADAIHDNPAVIEKYQQRKIEISDHEKKLSQMRRTHEDIVKSFEPMKANWEGRIRALIKVVNGLFSEYMAAL-GNRGNVYILEDKS-YDKWGLDIKICFRQD---GEMQTLHKNFHSGGERSVATIMFLMALQDSVISPFRVVDEINQGMDEPNERQVFKRIVENSIDKPNGPLRPQYFLITPKLLQGLTAMEKEDVTVHFVMNGPYNIKDYRDWNIPRFIKKRKE----LNSGAAGSSKQRR 305          
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUQ7_9STRA)

HSP 1 Score: 197 bits (502), Expect = 3.420e-52
Identity = 114/262 (43.51%), Postives = 161/262 (61.45%), Query Frame = 1
Query:  268 TEFGGKYNELPGNMEELEAVIEDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDE-SSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLIAAKK--RQLALMNGDAQG 1044
            TE   K NELP     ++A++E+        + NP+VI  YQK  +E EA  K L+EL     +       ++  W  +++ +V +LN  F  YM  +   G + R+  D+ +++K+WGI+I V FR    G ++ VL +   SGGERSVSTI++LMALQD+  SPFRVVDEINQGMD +NER VF RIV NS GP   QYFLITPKLLQGL AM++DD+T++V++NG   I+   +  +K  I  ++  ++  L NG   G
Sbjct:  163 TELKAKLNELPAVTATVQAMLEEAQNAALSIIDNPEVIQHYQKRLKEIEANEKELAELRTAADSHTGGYQDLKAAWEARIERLVTKLNGRFEVYMRSL---GNQGRIEMDKGATYKEWGIKILVSFRQ---GLELEVLRKNFQSGGERSVSTIMYLMALQDMVRSPFRVVDEINQGMDERNERIVFRRIVENSTGPESPQYFLITPKLLQGLTAMEHDDVTVLVVFNGPWNIRKHTDWDLKSFIEKRRAGKRARLTNGGEAG 418          
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U763_9STRA)

HSP 1 Score: 192 bits (488), Expect = 6.420e-51
Identity = 121/324 (37.35%), Postives = 177/324 (54.63%), Query Frame = 1
Query:  211 KAKAEQVAPRWIGDDQSNPTEFGGKYNELPGNMEELEAVIEDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLA-----------EDESSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSR---------KQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLIAAKKRQLALMNGDAQGNGPQQRRRIS*PNPSSTCLGSLLEDG 1122
            +AKA ++       D  N      K  ELP  + E+EA +++ T  ++ +  NP+V+ +Y++ K E   TR+ L  L          +  ++ PW   L++ V ++N LF +YM+++ G  GEVRLA           E+ESSF+ WGIEIRV+FR ++    +  L+  VHSGGERSVSTI++LMALQ+L  SPFR VDEINQG+D +NER VF RIV NS  P +          QYFLITPKLL  L  M+N+D+T++ I+NG    +   + +  K +           G ++  G +    +   N SS       +DG
Sbjct:   25 RAKATEMV------DIHNDPVMRAKLEELPETLPEVEAALDEATLKVNSTTDNPEVLVQYEQRKREIVETREELEGLSHAQDAKRVNLEKMKDPWESALKNTVTKVNTLFEKYMTEL-GFAGEVRLAKGEPISGEDGGEEESSFEDWGIEIRVKFREKSS---LQTLSAHVHSGGERSVSTIMYLMALQELMVSPFRCVDEINQGLDERNERLVFRRIVANSTQPPKIPSDPLSHAGQYFLITPKLLPNLTDMENEDVTVLFIFNGPFNFRHFSDWNPDKFV----------KGISETPGDEGEDNLDNNNSSSKATKHSYDDG 328          
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CV33_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.860e-49
Identity = 124/294 (42.18%), Postives = 175/294 (59.52%), Query Frame = 1
Query:  211 KAKAEQVAPRWIGDDQSNPTEFGGKYNELPGNME------ELEAVIEDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSC----GPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLIAAKKRQLALMNGDAQGNGPQQR 1062
            K + E+ A  +  D   N TE  G++ +L G++E      ELEA +ED          NP VI KYQ+ K E     K LS++   + +  +    ++  W  +++ ++  +N LF EYM+ + G  G V + ED+S + KWG++I++ FR +   G+M  L++  HSGGERSV+TI+FLMALQD   SPFRVVDEINQGMD  NERQVF RIV NS     GP R QYFLITPKLLQGL AM+ +D+T+  + NG   IK   + ++ + I  +K     +N  A G+  Q+R
Sbjct:  553 KIETEEFARLY--DAAGNCTELAGRFAQLSGDLENLETRGELEAQMEDEQNSADAIHDNPAVIEKYQQRKIEISDHEKKLSQMRRTHEDIVKSFEPMKANWEGRIRALIKVVNGLFSEYMAAL-GNRGNVYILEDKS-YDKWGLDIKICFRQD---GEMQTLHKNFHSGGERSVATIMFLMALQDSVISPFRVVDEINQGMDEPNERQVFKRIVENSIDKPNGPLRPQYFLITPKLLQGLTAMEKEDVTVHFVMNGPYNIKDYRDWNIPRFIKKRKE----LNSGAAGSSKQRR 835          
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PPY6_9STRA)

HSP 1 Score: 186 bits (473), Expect = 3.030e-49
Identity = 112/287 (39.02%), Postives = 167/287 (58.19%), Query Frame = 1
Query:  211 KAKAEQVAPRWIGDDQSNPTEFGGKYNELPGNMEELEAVIEDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESS------FKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSC-------GPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLIA---AKKRQLAL 1023
            K +AEQ AP +    Q  P +   +  ELP ++EE+ A IE+    + G  +NP V+ +Y ++  + EA      ++  G  N   ++  +   W+ K+++ + +++  F +YM  ++ C GEV L+  +++      FK WG+EIRVRFR     G + VL+ + HSGGERSVSTI+++MALQ+L  SPFR VDEINQG+D +NER VF RIV NS             QYFLITPKLL  L  MDN  +T +V++NG    K   + ++ KL+    +KKR + L
Sbjct:   16 KEQAEQHAPLYDSSGQELPLKE--QLEELPESVEEVGAAIEECRTKMQGMENNPGVLQEYGRILRDIEAAEAERDKVANGVSNNKTKLERLLHTWKSKMENTIKEVDSKFSKYMQDLN-CAGEVVLSGSDNAEIGTYNFKNWGVEIRVRFRQ---AGTLQVLSAQRHSGGERSVSTIMYMMALQELMSSPFRCVDEINQGLDERNERLVFKRIVQNSTLAPGAVPNDHSGQYFLITPKLLPNLEGMDNPRLTALVVFNGPYNFKDCRDWNVPKLVERAESKKRSVEL 296          
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTJ1_HETAK)

HSP 1 Score: 182 bits (462), Expect = 3.070e-46
Identity = 105/208 (50.48%), Postives = 141/208 (67.79%), Query Frame = 1
Query:  361 VHNPQVINKYQKLKEETEATRKA---LSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEE 975
            V NP+V+ KYQ   E   ATR+A   L EL+E   + + R    +  W  K++  VA+LN  F++YM++M+  GG V L +  + ++ + I+I+V +R    G  + VL+ RV+SGGERSV+T+++LMALQD+  SPFRVVDEINQGMD +NER VFSRIV N CG  R QYFLITPKLLQGLVAMD+ D+   VI NG   IK  ++
Sbjct:  249 VDNPEVLRKYQ---ENVAATRRAEAQLQELIEAAQSRDARFGETKVKWERKVETAVARLNQHFKKYMNQMN-YGGAVELFKT-AGYENFAIQIKVSYRQ---GEPLKVLDGRVNSGGERSVATVIYLMALQDMISSPFRVVDEINQGMDERNERMVFSRIVRNCCGDRRPQYFLITPKLLQGLVAMDHPDVRAHVICNGPWNIKNCDK 448          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Structural4.400e-20187.64maintenance of chromosomes protein 5 n=1 Tax=Ectoc... [more]
Structural2.660e-19386.59maintenance of chromosomes protein 5 n=1 Tax=Ectoc... [more]
Structural1.710e-10179.55maintenance of chromosomes protein 5 n=1 Tax=Ectoc... [more]
Structural2.990e-5546.22maintenance of chromosomes protein 5 (Fragment) n=... [more]
Structural1.150e-5342.18maintenance of chromosomes protein 5 n=1 Tax=Dicty... [more]
Structural3.420e-5243.51maintenance of chromosomes protein 5 n=2 Tax=Rhizo... [more]
Structural6.420e-5137.35maintenance of chromosomes protein 5 n=1 Tax=Atthe... [more]
Structural1.860e-4942.18maintenance of chromosomes protein 5 n=1 Tax=Dicty... [more]
Structural3.030e-4939.02maintenance of chromosomes protein 5 n=1 Tax=Lepto... [more]
Structural3.070e-4650.48maintenance of chromosomes protein 5 n=1 Tax=Heter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9591contigE_fasciculatus_S2_contig9591:173..5884 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score585.1
Seed ortholog evalue2.2e-164
Seed eggNOG ortholog2880.D7FWM4
Preferred nameSMC5
Model size2450
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0000228,GO:0000280,GO:0000706,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000729,GO:0000781,GO:0000793,GO:0000794,GO:0000803,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003697,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005783,GO:0005789,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007063,GO:0007088,GO:0007127,GO:0007131,GO:0007346,GO:0007568,GO:0007569,GO:0008144,GO:0008150,GO:0008152,GO:0009410,GO:0009987,GO:0010033,GO:0010243,GO:0010564,GO:0010638,GO:0010705,GO:0012505,GO:0014070,GO:0014074,GO:0016020,GO:0016021,GO:0016043,GO:0016462,GO:0016604,GO:0016605,GO:0016607,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022402,GO:0022414,GO:0030054,GO:0030176,GO:0030554,GO:0030915,GO:0031000,GO:0031224,GO:0031227,GO:0031974,GO:0031981,GO:0031984,GO:0032200,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033554,GO:0034091,GO:0034093,GO:0034182,GO:0034184,GO:0034641,GO:0035061,GO:0035639,GO:0035825,GO:0035861,GO:0036094,GO:0036270,GO:0042175,GO:0042221,GO:0042493,GO:0042592,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043279,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045787,GO:0045840,GO:0045876,GO:0045931,GO:0046483,GO:0048285,GO:0048518,GO:0048522,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051276,GO:0051304,GO:0051321,GO:0051716,GO:0051726,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060249,GO:0061982,GO:0062033,GO:0065007,GO:0065008,GO:0070013,GO:0071139,GO:0071704,GO:0071840,GO:0072546,GO:0090068,GO:0090304,GO:0090398,GO:0090734,GO:0097159,GO:0097367,GO:0098687,GO:0098796,GO:0098827,GO:0106068,GO:0140013,GO:1901265,GO:1901360,GO:1901363,GO:1901698,GO:1902494,GO:1903046,GO:1990234,GO:2001252
Exons7
EggNOG free text desc.sister chromatid cohesion
EggNOG OGsCOG1196@1,KOG0979@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-06_001230.1
Cds size1047
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9591.17610.1prot_E_fasciculatus_S2_contig9591.17610.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9591 203..4511 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842605.5856473-UTR-E_fasciculatus_S2_contig9591:172..2021696842605.5856473-UTR-E_fasciculatus_S2_contig9591:172..202Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9591 173..202 +
1696842605.6987529-UTR-E_fasciculatus_S2_contig9591:4511..58841696842605.6987529-UTR-E_fasciculatus_S2_contig9591:4511..5884Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9591 4512..5884 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842605.6020436-CDS-E_fasciculatus_S2_contig9591:202..3131696842605.6020436-CDS-E_fasciculatus_S2_contig9591:202..313Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9591 203..313 +
1696842605.6123853-CDS-E_fasciculatus_S2_contig9591:1144..12011696842605.6123853-CDS-E_fasciculatus_S2_contig9591:1144..1201Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9591 1145..1201 +
1696842605.62305-CDS-E_fasciculatus_S2_contig9591:2270..24681696842605.62305-CDS-E_fasciculatus_S2_contig9591:2270..2468Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9591 2271..2468 +
1696842605.6339688-CDS-E_fasciculatus_S2_contig9591:2875..30241696842605.6339688-CDS-E_fasciculatus_S2_contig9591:2875..3024Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9591 2876..3024 +
1696842605.648426-CDS-E_fasciculatus_S2_contig9591:3349..35481696842605.648426-CDS-E_fasciculatus_S2_contig9591:3349..3548Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9591 3350..3548 +
1696842605.6645856-CDS-E_fasciculatus_S2_contig9591:3744..38941696842605.6645856-CDS-E_fasciculatus_S2_contig9591:3744..3894Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9591 3745..3894 +
1696842605.677247-CDS-E_fasciculatus_S2_contig9591:4328..45111696842605.677247-CDS-E_fasciculatus_S2_contig9591:4328..4511Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9591 4329..4511 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9591.17610.1

>prot_E_fasciculatus_S2_contig9591.17610.1 ID=prot_E_fasciculatus_S2_contig9591.17610.1|Name=mRNA_E_fasciculatus_S2_contig9591.17610.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=349bp
MLDVSLEVLAATCARRVAGDKLEEASEALRNAQDARAELEQNVKDLKAKK
SQYLKQFVAEKAKAEQVAPRWIGDDQSNPTEFGGKYNELPGNMEELEAVI
EDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNS
IRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEI
RVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDE
INQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITI
IVIYNGVNTIKGTEEHSMKKLIAAKKRQLALMNGDAQGNGPQQRRRIS*
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mRNA from alignment at E_fasciculatus_S2_contig9591:173..5884+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9591.17610.1 ID=mRNA_E_fasciculatus_S2_contig9591.17610.1|Name=mRNA_E_fasciculatus_S2_contig9591.17610.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5712bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9591:173..5884+ (Ectocarpus fasciculatus EfasUO2)
GTGAAAAAGGCTCAGGAGCATGCTTCGGCCATGCTCGACGTCTCCTTGGA GGTGCTGGCCGCCACGTGTGCGAGGCGCGTGGCCGGCGATAAGCTGGAGG AAGCCAGTGAGGCGCTGAGGAACGCGCAAGATGCCAGGGCGGTGAGAACA AATAATATTAAAAACTGTAGAACACATTTGTAAATTCTCTTTTTGGTTCG TTGAGATTTGGTGGCCTCTTCGAGTCAAAAGCACGTCAGCCGTGTGAGCT TGGGAAACGTCACTGATGATGGCAGCTGGCAGCTGATTCACTCCAACACT GCTTTACTTTCATCTCGCATCACGCCTTCATGACAATATGCCATGCTCTG ATGAGCCCACTCCCGAGGCGCACCTGTGTAAAGATTTAGATTTAGAGAGT CGTTCGTGGTCCTGAGTTGTAGCTTGATTTGTAACGTTACATATCACGAT GAAAGCTGGAGGGCTCCAGGAGGTGCTGCAGAATGCCAAGGGGGGAAGAA GCGTTTTGGTAATTTTATGAGGGGGGCGGGAACGCTGGTTAATCGTGCTC GTGTTTATCTCGTCCTCTCATAGATTGCAATTTTTTCACGTCCTTGTGCG AGTTTGTTCTCGTGGTTTACTAGCCGGATTCAATTGAGCGTGATCTTACG TGTTGCCCTTTGACTAATTTTCTCATTTTCGTTAAAAGTTTCACTTTTTG TTTCTCATCATTGTTTTCGTCTCGCTTTCTAACCTCGAACGCCTGGATGT CCAATCCGCCATCTGTTCTATTTGCTTGTTTGTTTTTTTTTCGTTTGTTG ACGACGGCTGCACGTCCACTGTTTGGATGACTGCTGTCTTCCGGGATCAG ATGCGAAAAAAGTTAACCGTGTTCTCGTTGAATCTATCTGTGTCTGTGTG TGTGATTTTTCTTGTTCGTGGAGTTGCCCTCACGGTTTCCTCTTTTCACT TTTTATTTTTATTTCGAAACAGGAGCTGGAACAGAACGTCAAGGACTTGA AGGCCAAGAAATCGCAATATCTCAAGCAGGTGAGAAACGTTGTCGATGCT TTTATTGATTGTTGGTGCGCCTCCGCCTAGAAACACACTCGGCTCCGGGT GGCCACCTCGTAATTGGAAGGGCCGTGCGTGTTGTCTGAAAGTCCTTGCA TGCTTTGTTTCCAGGCGCTTTGCGTTTTGTCCTGGCACGACGCACGTCTC TGCTCCAACTACCTACCGTCGTGCTGAGGGGGCCATGTTTGGCAGCATGT TTCGACTGCATCGACTTTAGCGTTTCAAAGAACACGCAGCATGTTCACCC GCAAAAGCAGGGTGACTGACACAGCAATACAGCAATACAGCAATACAGCG ATGCGATGTACCCTCGGAGGGATACCGTGGCGAGGGGGAGGGGAGGGGGG ATTTCTAGCCGAAAACGAGACGGTCGTAACAAGTTGTAAATGTGTACTAA AACTTGGCAAGTATTGTAGAGAGTGGTCTTTGTGATAACAGTGGGGTATA GCCTGTGCACATAGTTTGCCGATGCGATGCTCCGTCTCGGTGCCTTCCTC GTACAGTACAGCACTAGTGGTGGTGGTCCCTGTACAGCAGTATACGGCCT AATAGTAGTGCTACGGGATTCCGCCAGCCTTTTACCGGGCACCCGGCACT AATGAGAGTATGAGACGGACACCTTGAATATTACATCTGGGCAATGCGAT ATTATTGGCTTTCTTCAGCAGGGCCACCGGACATGTTTATTTACGGGGAC CACTACTCTCTTCATTTCGTTGCTCGTATGTAGGCTCAGAAGGATTGTGT GGCGTGAAGCAAACCTAAACCTTTCAGCTTCAGTTTCGAAGTTCTAGTTT GAGGGGGGAGTGCTTGTCTTTTTATCTTCAAACCTAGGGCGTGCGAAATA ATCGGCTCAAGTGTATTTGTAACAGAGCCTGCTTTCTCCCAGTCAAACGT GTTCTTGTTGATGATGCTGTGGTTGTTAATAATATGCGAAGAACCGGTCC GATCTCTGCTCGACAGACTAAATACCTTCGTTGCCTTCAAGCATCCCCGC CGCTGGCCCGACTGACTTGTTTTTCGTTCTTTATTCGTCGGCGAACAGTT CGTGGCTGAGAAAGCAAAGGCCGAGCAAGTGGCGCCGCGGTGGATCGGTG ATGATCAGTCCAACCCGACCGAGTTCGGGGGAAAGTACAATGAGTTGCCC GGCAACATGGAGGAGCTGGAAGCGGTCATCGAAGACCTGACGGAAGACCT CAGTGGCTCTGTCCACAACCCGCAAGTCATCAACAAGTACCAAAAGGTGC GTTGTTGTTCTTGTCGTTTCTGCTGTGGAGATGAGATGCATTGATCGACC CTTACGTACGGAACAACATGCCGTGTGGTGGATGATGCACCACCGCGCAG CTGCAGCCCATTTGCTTTAAAGCTACCGAGCGTTGAAGTACAGTTTTTTT TTTTATGCATCCCAAATCCACTACTATTATAGTTGGTTGTATCGTTTCGC CCGTTATGCTCCCCGACGTCAGCCGTTTCACATGCAGTAGTATAATGGAA ACCCCGAGGATGCTTTTTTTTTCGTCATTGGCGAGAACTAATCGGGGGTG ACGGGATTTAATTCCGTTGGTTGGTGTTTGGCAGTACTGTATCTCACGTG GCGATGTGTTTTCTACGCTGCATCCGTCCGTCTTGTTTTTGTGTTGTTTG CAGCTGAAAGAAGAGACAGAAGCGACCCGGAAGGCACTGAGCGAGCTGGT CGAGGGTAACCTCAACGCCAACGAGCGGATGAACAGCATCAGGACTCCTT GGAGGGAGAAGCTGCAGGACATGGTGGCCCAGCTCAACGACCTCTTCAGG GAGTGAGTCTTGACTATTGTACTGATTAGAGGGAGCCTTGACCTTGATGG GGGGGCACAAGACTGTCGGCCGCTATGCAGTGTAGCGCCCTTGAGCGTGC TGTGTGTGTAGTCACGCCAGTGGTGTGAAAAAACGAACAAGTATGTGTAG GAGAAAACGAATTTAATAGCACCCAACGAGCACCAAGAAAATTCCCGGAA TTTTCTGGAATTACGCTCGCTGCTCCCTGAGGTGTTGAGGCCGGATAGAC GCCGAATTAATTAATCCCAATGTATTGAAACTCTCTCGAATTTCCTAACG TTGCTACAATAACGATGGCGATAACAGGTACATGTCGAAGATGGACGGAT GCGGCGGCGAGGTTAGGCTGGCTGAGGACGAGTCGTCCTTCAAGAAGTGG GGGATCGAGATCAGGGTGCGCTTCCGGTCGGAGGCGGACGGGGGCAAGAT GGCGGTGCTGAACCAACGGGTACACTCGGGAGGCGAGCGGTCCGTGTCTA CCATCCTCTTCCTCATGGCCCTGCAGGTGAGGGGAAGGAAAGGGGTGTCT GCGCGGACGGGATGGCTCGCGGGTCTGGCCGAATGGTACACGACGAAACA GGGCATGAAAAACTTCAAGCAGGCGTATTGGGAATATGTACATTCTACGT TCCCTTTCCTCCATGACATCCTTTGGTTTATAACTTGTTTTCCCTACGAA CGACCGAATGAATGCCTCGCAGGACCTGCAGCACAGCCCGTTCCGTGTGG TTGACGAGATCAACCAGGGCATGGACCCCAAGAACGAGAGGCAGGTGTTC AGCCGCATCGTGCTCAACTCGTGCGGGCCCAGCCGCAAGCAGTACTTCCT CATCACGCCCAAGCTGCTTCAGGTGGGCGCTGCGTTTTCCCGCTGTTTTT TTTATTTGAGTGCTTCATGTCGTACACTTGTTTTTTCGTCGTGAATTTTT AATGAAGATCCGCCTTCACAGCTGTAGAGATTGGTTCACACCCCATCCCC TGATATTCGTGTCAGGAAATTTACGAAGGCCTTCTTTTTCCTTCGCTGGT CTGCGTCCTCTCTCATACTGTAAGCACGTGCGGACCTTCGCATGACACTG GCTCTTTTTGGCATTATCAGCCTCGTCGTCTTGCTGTTGTTTCTCCCTCT TGTAGAAAGTATACACAGAGTAGGGAATGGCTGCTCACATCCGATACAGC AGTGTGTACGACACACGCATGTATGGTTTTTTCATCGTTCGGTTCCTTAC TGCGGTGGTCTTTGCTTGAACGATTCAATACCGGTGTGATGTAAACGCGC GTTCAGGGCCTGGTGGCCATGGACAACGACGACATCACGATCATCGTCAT CTACAACGGCGTCAACACTATCAAGGGCACCGAGGAGCACTCCATGAAGA AGTTGATCGCCGCAAAGAAGCGACAGCTAGCCCTCATGAACGGCGACGCG CAGGGCAACGGTCCCCAGCAGCGACGCCGGATTTCCTAGCCTAACCCTTC GTCTACCTGTTTGGGTTCTCTACTGGAGGACGGATTTACTTGTCTGTTGG AGGGATTCTTGAGTCATGGCCGGGTTTGGTGAGTCGGGGTATGTTGTGCA CTTGTTGGAGTTCCGTTGTCTTAGGCTTGGGGGCGATTTGTCCGCTGTGC TATGTAGGGCCGACGCCCGCTTTGTGATGGTGTAAGTAAGAGAGGGCGGG GGGGCATATGGCTGAAGCAGCGAGTGGGGGAGGAGGGGAGTTGTTTTCCT GCGCGGCTGGGTAGCGTTGTTGTTGTTGCTGTCATCATGTAAAGAGCATC ATGAAAGAGACGTCTCGATCTCTGCTCAGTATCTTCAAGTGTTGCGAATT TCGCGGTCTTGTTGTTACCGTGTGTTGCATGGGTTATCACACCCGCGGAA CCAGTTATTGAAGCTCGATTACTCCACGACGAAGGAGATTCCAACCTTGA AGGATACGTTTTCGGTAAGCTCTCGACCAGACCTTTCCGATGCCGCCATT TTCGGAGCCGTCACTGCTGTTTTAGGTGCAGAGTAGTCGAGCTTTAAAAA TAGGTTCCGGGGGGGTGGTGTCTTGTGCAACCTACGGTATGCCGTGCAAC CTACGGTATGCCGACAAAGGTTCGCCTTGCTGCTTTGGGAGGATTTTCTG TTCGTAGTCGTTGTATCTGCTGCCGTTCGATCGTGCCTCCGAGTGCACAT TGAGATCGTTGATTATAAGTCTTTTTTTCGAGAGGCGTGAGTTATAGTGA TATCTACCTGATAGCCTCGGGTGCATCGCCCTCGTTCGTTTTTCTTATCT CCACTGCACTGCACGCTGTCGTAGAATGAAGCCCGTAGGATGGGTCGTAG GTAAATGGGAGTCGGCATGACCAGACGGCCCTTCTTTTTCCATAGTATAA TGATGTGAGGACAGAATAAATACGGGAAGCACGTAAATATAGAAGTACCA CAGCGTTCGGACCGAGTTTGAGAGTTTGCTGCCGGTGATGCAGCAGAACA ACGACGCGTCCTATGCATACGGCCTGCAGCAATGCTGCCTAGCGTAGGTA TCTGGAGAAATGAAACATGAAAACGTCTTTACCGCTCCCCCCTGCAAGTA ATCTGGTTGGGATGAAGAGCCCATCGCCGAAATGTGTGGACTACAAATCA TATTCCTTGCGTATAATATGCATACCAAACTGGAAATACAAGTGTAAAAT GGATGGAGATCCACAACCAACAGGGTGCCACACATAACGGCGTCCGGACA CTGCTGTAGAAGCGAGTAGGGCGCCCAAGGCCGCGCTTGCGGCGAACGAC GTACCCAACTGATGACGTTGTCGCACCCTGTTTTCCCTTTTCCCTGCCGT AAGCTGTATGCT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9591:173..5884+

>mRNA_E_fasciculatus_S2_contig9591.17610.1 ID=mRNA_E_fasciculatus_S2_contig9591.17610.1|Name=mRNA_E_fasciculatus_S2_contig9591.17610.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1047bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9591:173..5884+ (Ectocarpus fasciculatus EfasUO2)
ATGCTCGACGTCTCCTTGGAGGTGCTGGCCGCCACGTGTGCGAGGCGCGT
GGCCGGCGATAAGCTGGAGGAAGCCAGTGAGGCGCTGAGGAACGCGCAAG
ATGCCAGGGCGGAGCTGGAACAGAACGTCAAGGACTTGAAGGCCAAGAAA
TCGCAATATCTCAAGCAGTTCGTGGCTGAGAAAGCAAAGGCCGAGCAAGT
GGCGCCGCGGTGGATCGGTGATGATCAGTCCAACCCGACCGAGTTCGGGG
GAAAGTACAATGAGTTGCCCGGCAACATGGAGGAGCTGGAAGCGGTCATC
GAAGACCTGACGGAAGACCTCAGTGGCTCTGTCCACAACCCGCAAGTCAT
CAACAAGTACCAAAAGCTGAAAGAAGAGACAGAAGCGACCCGGAAGGCAC
TGAGCGAGCTGGTCGAGGGTAACCTCAACGCCAACGAGCGGATGAACAGC
ATCAGGACTCCTTGGAGGGAGAAGCTGCAGGACATGGTGGCCCAGCTCAA
CGACCTCTTCAGGGAGTACATGTCGAAGATGGACGGATGCGGCGGCGAGG
TTAGGCTGGCTGAGGACGAGTCGTCCTTCAAGAAGTGGGGGATCGAGATC
AGGGTGCGCTTCCGGTCGGAGGCGGACGGGGGCAAGATGGCGGTGCTGAA
CCAACGGGTACACTCGGGAGGCGAGCGGTCCGTGTCTACCATCCTCTTCC
TCATGGCCCTGCAGGACCTGCAGCACAGCCCGTTCCGTGTGGTTGACGAG
ATCAACCAGGGCATGGACCCCAAGAACGAGAGGCAGGTGTTCAGCCGCAT
CGTGCTCAACTCGTGCGGGCCCAGCCGCAAGCAGTACTTCCTCATCACGC
CCAAGCTGCTTCAGGGCCTGGTGGCCATGGACAACGACGACATCACGATC
ATCGTCATCTACAACGGCGTCAACACTATCAAGGGCACCGAGGAGCACTC
CATGAAGAAGTTGATCGCCGCAAAGAAGCGACAGCTAGCCCTCATGAACG
GCGACGCGCAGGGCAACGGTCCCCAGCAGCGACGCCGGATTTCCTAG
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