mRNA_E_fasciculatus_S2_contig9569.17582.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9569.17582.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP22_ECTSI) HSP 1 Score: 659 bits (1700), Expect = 4.280e-234 Identity = 325/330 (98.48%), Postives = 329/330 (99.70%), Query Frame = 1
Query: 1 EDRRVEDMILKVAGKSPPWLANFLRAFAPFVTLTFTIANIVGPVVVKFYALLYKVYKILPVNVLGMIYGLVMCFFGGFFHVTIAAIEAFNMTGGEKVMLCVHDLKQDIKALHYASKEDDKRDDDHDGIPDVKQISPEKLLTRKTALALRVVNPDRATNAITGIWQGYMGVLVVLKFRFAKVIALAVSIGNNLRPIVAKIFGPALAFVIPREYHQWIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLMYFVSEVTPLKLDPDNSFLDEVLGWTLAACGAYFQTSINWDLPWAVDLVLWPAYLLETFLKWSVTWMDVPAQPA 990
EDRRVEDMILKVAGKSPPWLANFLRAFAPFVTLTFTIANIVGPVVV+FYALLYKVYKILPVNVLGMIYGLVMCFFGGFFHVTIAAIEAFNMTGGEKVMLCVHDLKQDIKALHYASKEDDKRDDDHDGIPDVKQISPEKLLTRKTALALRV+NPDRATNAITGIWQGYMGVLVVLKFRFAKV+ALAVSIGNNLRPIVAKIFGPALAFVIPREYHQWIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLMYFVSEVTPLKLDPD+SFLDEVLGWTLAACGAYFQTSINWDLPWAVDL LWPAYLLETFLKWSVTWMDVPAQPA
Sbjct: 62 EDRRVEDMILKVAGKSPPWLANFLRAFAPFVTLTFTIANIVGPVVVRFYALLYKVYKILPVNVLGMIYGLVMCFFGGFFHVTIAAIEAFNMTGGEKVMLCVHDLKQDIKALHYASKEDDKRDDDHDGIPDVKQISPEKLLTRKTALALRVINPDRATNAITGIWQGYMGVLVVLKFRFAKVVALAVSIGNNLRPIVAKIFGPALAFVIPREYHQWIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLMYFVSEVTPLKLDPDHSFLDEVLGWTLAACGAYFQTSINWDLPWAVDLFLWPAYLLETFLKWSVTWMDVPAQPA 391
BLAST of mRNA_E_fasciculatus_S2_contig9569.17582.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S9_9STRA) HSP 1 Score: 337 bits (864), Expect = 3.230e-108 Identity = 164/324 (50.62%), Postives = 229/324 (70.68%), Query Frame = 1
Query: 1 EDRRVEDMILKVAGKSPPWLANFLRAFAPFVTLTFTIANIVGPVVVKFYALLYKVYKILPVNVLGMIYGLVMCFFGGFFHVTIAAIEAFNMTGGEKVMLCVHDLKQDIKALHYASKEDDKRDDDHDGIPDVKQISPEKLLTRKTALALRVVNPDRATNAITGIWQGYMGVLVVLKFRFAKVIALAVSIGNNLRPIVAKIFGPALAFVIPREYHQWIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLMYFVSEVTPLKLDPDNSFLDEVLGWTLAACGAYFQTSINWDLPWAVDLVLWPAYLLETFLKWSVTWMD 972
E R+E ++ K K+PP L N + APF+ + N+VGP ++K Y+ L+ +YK LP NV+ M+ GL FFGG F VT AAIEAF GG V + DLK D + A+K+DD+ DD+ +GI DVK+I +L++RK L LR V+PDR +A+ G+++G+ GVLVVL+FRFA+VIALAVSI +++RP+ ++I P LAF+IP+EYH+WI+ MIN C+ VA T+AW IQR++ST+QSAIKGGL+F+R+L+ F+ E + D ++++LDE+LGW LAA G Y Q +NW+LP VDL LWP ++ E L WSVTWMD
Sbjct: 17 EVHRMEKLLGKFKDKTPPALVNLFKLLAPFIKAFCVVLNVVGPYIIKLYSALFAIYKRLPKNVVAMLLGLAFTFFGGLFAVTFAAIEAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEIPSHQLVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDDESTYLDEILGWALAAGGIYVQIHMNWNLPLLVDLFLWPLHVSERVLIWSVTWMD 340
BLAST of mRNA_E_fasciculatus_S2_contig9569.17582.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8HJ76_HEMAN) HSP 1 Score: 267 bits (682), Expect = 3.900e-81 Identity = 139/327 (42.51%), Postives = 204/327 (62.39%), Query Frame = 1
Query: 1 EDRRVEDMILKVAGKS--PPWLANFLRAFAPFVTLTFTIANIVGPVVVKFYALLYKVYKILPVNVLGMIYGLVMCFFGGFFHVTIAAIEAFNMTGGEKVMLCVHDLKQDIKALHYASKEDDKRDDDHDGIPDVKQISPEK-LLTRKTALALRVVNPDRATNAITGIWQGYMGVLVVLKFRFAKVIALAVSIGNNLRPIVAKIFGPALAFVIPREYHQWIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLMYFVSEVTPLKLDPDNSFLDEVLGWTLAACGAYFQTSINWDLPWAVDLVLWPAYLLETFLKWSVTWMD 972
E RVE + +A + PPW + L P +T + PVV+ A ++ LP + +YGLV+CFFGG + VT+AA+EAF ++GGE+V C+ D+ DI + A+ D+K+DDDHDG DV Q+S +K LL+RK L LR V+PDR A+ G+ Q + GVL LK +FA+ +ALAVSI +NLR + P LA +IP EYH W++P+I+ CK V M VAW + R+I+T +++ GGL+ +R+ M +++ +K+ ++S LDE GWTL GAYFQ S + LP+ +++VL P ++E FL W+VTW D
Sbjct: 14 EAARVERICNALAEREGVPPWTKSLLVQLGPLLTTLLAFIDASTPVVMSAIAAAVAIWNTLPKQAITALYGLVLCFFGGHYTVTLAAVEAFRVSGGERVTQCIRDIWTDITNVRIANAADNKKDDDHDGKLDVDQLSSDKALLSRKIGLVLRTVDPDRVIQALGGLAQAFAGVLATLKVQFARTVALAVSISDNLRKPAGVLLTPVLAALIPPEYHHWVSPIISIACKVVGMWVAWLLARIIATCHASMIGGLMAARAAMGLANQMGWVKVTVEDSMLDEAAGWTLCVIGAYFQLSSGFSLPFPLNVVLLPVSMVEWFLTWAVTWFD 340
BLAST of mRNA_E_fasciculatus_S2_contig9569.17582.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2VT12_9DINO) HSP 1 Score: 261 bits (667), Expect = 9.800e-79 Identity = 131/313 (41.85%), Postives = 196/313 (62.62%), Query Frame = 1
Query: 1 EDRRVEDMILKVAGKSPPWLANFLRAFAPFVTLTFTIANIVGPVVVKFYALLYKVYKILPVNVLGMIYGLVMCFFGGFFHVTIAAIEAFNMTGGEKVMLCVHDLKQDIKALHYASKEDDKRDDDHDGIPDVKQISPEKLLTRKTALALRVVNPDRATNAITGIWQGYMGVLVVLKFRFAKVIALAVSIGNNLRPIVAKIFGPALAFVIPREYHQWIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLMYFVSEVTPLKLDPDNSFLDEVLGWTLAACGAYFQTSINWDLPWAVDLVLWPAYLLE 939
E R+E + + ++ +PPW A +++ AP V L I ++GP+V FYA LY+VY+ LP N ++GL +CFFGG + +++AA+EAF + GG+ +M+ + L+ + AS+EDDK D D DG+ DV+Q+ +L +RK AL LR ++P + A+ G+W GY+GVL LK R+A+ ALA SIG+ +RP +K+FGP++ V P +Y W+ P N CK + +T+AW +Q ISTVQS + GGL SR+ + + + D++ DEV GW LAA G Y+Q + LP + VLWPA LLE
Sbjct: 46 EAERLEKLTVGLSDAAPPWAAPYIKQAAPAVGLAGAIVEVMGPIVYNFYASLYRVYQTLPTNAASCLWGLALCFFGGRYPLSLAAVEAFKLAGGDSMMMHLVTLRDSAVKVQQASQEDDKHDADGDGVADVRQMGARQLFSRKMALVLRSIDPGVVSEAVGGLWSGYLGVLAALKLRYARTAALAHSIGDAVRPAASKLFGPSVLAVTPPDYRNWVGPAFNLACKVLGLTIAWRLQHAISTVQSGLTGGLQASRAALALMGRAS------DDTMADEVAGWALAATGIYYQF-LGGGLPAVLVPVLWPAGLLE 351
BLAST of mRNA_E_fasciculatus_S2_contig9569.17582.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813D688_POLGL) HSP 1 Score: 259 bits (662), Expect = 8.000e-78 Identity = 132/325 (40.62%), Postives = 201/325 (61.85%), Query Frame = 1
Query: 1 EDRRVEDMILKVA-GKSPPWLANFLRAFAPFVTLTFTIANIVGPVVVKFYALLYKVYKILPVNVLGMIYGLVMCFFGGFFHVTIAAIEAFNMTGGEKVMLCVHDLKQDIKALHYASKEDDKRDDDHDGIPDVKQISPEKLLTRKTALALRVVNPDRATNAITGIWQGYMGVLVVLKFRFAKVIALAVSIGNNLRPIVAKIFGPALAFVIPREYHQWIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLM-YFVSEVTPLKLDPDNSFLDEVLGWTLAACGAYFQTSINWDLPWAVDLVLWPAYLLETFLKWSVTWM 969
E R+E ++ +A G+ PPWL +LR P +A + GP + +FYA LYK+YK LP N ++GL CFFGG + AA EAF GG+++++C+ DL+ D+ ++ A +++D+ +S EK ++ AL +R V+P R + A++G+W GYMGV++ LK+ FA+ +A A SIG+NLRP+ AK+ P V P EY QW+ P IN CK VAM VAW +Q+++S+VQS+I GGLL SR + Y +S + +++ +DE+LGW LA+ G YFQ +P + +LWP + E++L+WSVTW+
Sbjct: 50 EAARLEHFMVSLATGQEPPWLTPYLRKLGPAFAAANQVAAVAGPFLYQFYAGLYKIYKALPQNAACGLWGLGACFFGGRYAAFFAAAEAFKTAGGDQMLVCLQDLQADLVSVLQAQEDEDEA-----------SLSGEKKASKTLALVMRTVDPGRLSMALSGVWAGYMGVVLALKYNFARTLAFAHSIGDNLRPVAAKLLAPTALSVTPPEYRQWVGPAINLGCKCVAMAVAWKLQQVVSSVQSSISGGLLASRCFLPYLMSSGLLASRNLEDTMIDEILGWGLASAGMYFQIIKGGSVPLLLAPILWPMGVAESWLQWSVTWL 363
BLAST of mRNA_E_fasciculatus_S2_contig9569.17582.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1REG4_ALECA) HSP 1 Score: 254 bits (650), Expect = 1.460e-76 Identity = 129/321 (40.19%), Postives = 195/321 (60.75%), Query Frame = 1
Query: 28 LKVAGKSPPWLANFLRAFAPFVTLTFTIANIVGPVVVKFYALLYKVYKILPVNVLGMIYGLVMCFFGGFFHVTIAAIEAFNMTGGEKVMLCVHDLKQDIKALHYASKEDDKRDDDHDGIPDVKQISPEKLLTRKTALALRVVNPDRATNAITGIWQGYMGVLVVLKFRFAKVIALAVSIGNNLRPIVAKIFGPALAFVIPREYHQWIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLMYFVSEVTPLKLDPDNSFLDEVLGWTLAACGAYFQTSINWDLPWAVDLVLWPAYLLETFLKWSVTWMDVPAQPA 990
L ++ +SPPW A +L AP + + ++GP +V+ + Y++LP V + GL M FFGG + V+IAA EAF GG +V +C+ DL + +A+ A D++ D D DG+ DV+Q+ +L+ RK AL ++ ++P+ A G+W YMGVL VLKF+FA+ IALA SI NLRP +AK+ GP L V P +Y +WI+P ++ CK VA VAW +++L +TVQS GGL+ SR+L+ + E + + D + LDEV+GW + ACG Y Q +P + + WP +LE L+W+V W+D +P+
Sbjct: 2 LALSTQSPPWAAQYLAKAAPAIGVLGAGCELLGPALVRLGGAACEAYRLLPGTVARGLGGLGMSFFGGRYTVSIAAWEAFRSMGGSQVYVCLQDLGEQGRAVWVAHVADEEEDADADGVADVRQLEGGRLVARKAALVMKTIDPETVARAAGGLWTAYMGVLTVLKFQFARTIALAESIAQNLRPAMAKVLGPTLVAVTPPDYRKWISPAVSLLCKLVAGAVAWKVKQLAATVQSGFCGGLIASRALLELMRERRLVSVADDETLLDEVVGWCVGACGIYVQLFRGGPVPAILSPLFWPLDVLERVLQWNVAWVDAAQKPS 322
BLAST of mRNA_E_fasciculatus_S2_contig9569.17582.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLK5_9STRA) HSP 1 Score: 240 bits (612), Expect = 3.370e-70 Identity = 119/321 (37.07%), Postives = 198/321 (61.68%), Query Frame = 1
Query: 1 EDRRVEDMILKVAGKSPPWLANFLRAFAPFVTLTFTIANIVGPVVVKFYALLYKVYKILPVNVLGMIYGLVMCFFGGFFHVTIAAIEAFNMTGGEKVMLCVHDLKQDIKALHYASKEDDKRDDDHDGIPDVKQISPEKLLTRKTALALRVVNPDRATNAITGIWQGYMGVLVVLKFRFAKVIALAVSIGNNLRPIVAKIFGPALAFVIPREYHQWIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLMYFVSEVTPLKLDPDNSFLDEVLGWTLAACGAYFQTSINWDLPWAVDLVLWPAYLLETFLKWSVT 963
E R +I + +PP +L+ AP ++ ++ P+++ A + K ++++P +L ++G ++CFFGG + TIAA+EA+ GG + DL + K + + S EDD +D+D DGI DV QIS ++L RK +AL +PD+ AI GI+ G++GV+ VLK +FAK IAL +IG+ L ++ P L +IP +YH+WI ++ Y CK +A+++AW++QR+IS SAI+GGLL SR ++ F++ + + S+LDE++GW+LAA G YFQ + + +P+ +L+LWP + E ++ W+V+
Sbjct: 64 EAERWTKLISSASESAPPAAVPYLKMMAPVLSAVLVGLHMALPLILSAAAAVDKFFQVVPAQLLVAVFGALICFFGGMYPATIAAMEAWQQAGGRRAYENARDLYIEFKRVMHKSAEDDLKDEDGDGIADVDQISGKELFMRKAHIALTTCDPDKLNGAIQGIYTGWVGVIAVLKIQFAKTIALGSAIGDFLYSPALRVATPVLVHLIPEDYHRWIPSLVLYVCKSIALSIAWYVQRVISAFHSAIRGGLLCSRGVLNFMNSRGIIDFNDTESYLDEIVGWSLAAAGFYFQFMMGFSMPFPFNLLLWPFGVAEWYIVWTVS 384
BLAST of mRNA_E_fasciculatus_S2_contig9569.17582.1 vs.
Match: Hypothetical (protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2ETN3_9DINO) HSP 1 Score: 236 bits (601), Expect = 8.600e-69 Identity = 121/324 (37.35%), Postives = 195/324 (60.19%), Query Frame = 1
Query: 1 EDRRVEDMILKVAGKSPPWLANFLRAFAPFVTLTFTIANIVGPVVVKFYALLYKVYKILPVNVLGMIYGLVMCFFGGFFHVTIAAIEAFNMTGGEKVMLCVHDLKQDIKALHYASKEDDKRDDDHDGIPDVKQISPEKLLTRKTALALRVVNPDRATNAITGIWQGYMGVLVVLKFRFAKVIALAVSIGNNLRPIVAKIFGPALAFVIPREYHQWIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLMYFVSEVTPLK-LDPDNSFLDEVLGWTLAACGAYFQTSINWDLPWAVDLVLWPAYLLETFLKWSVTWM 969
E RV + L A P ++ + L P+ + + P +V + ++Y LPV + +YGL +CFFGG + V I+AIEAF M+GG+K+ C D+ ++ L ++EDD D D+DGI DV QIS +L+ RK L + ++PD+ + A+ G++QG++ VL+ +KF+FA+ +ALAVS+ R A + P LA +P + WI I+Y K VA+ AW +Q+++ VQSAI GG +F+++L+YF+S+ ++ +D D + +DE +GW +AACG YFQ + L + L+L+P ++E L+W VTW+
Sbjct: 44 EKARVAKLALAAAAHPPSYVYDVLEQALPYWNQALEVFAYIIPKIVFVWTKSTELYAALPVEIAMCLYGLALCFFGGTYVVAISAIEAFKMSGGDKISACWKDICEEYAVLRDRNQEDDVEDLDNDGIADVLQISQRELMQRKIKLVVSSIDPDKVSGAVGGLYQGFLSVLMTVKFQFAQSVALAVSMAEKARKPCAVVLTPLLATALPPDSEDWIVAFIDYLTKTVALLFAWTLQKMVCAVQSAIAGGHIFAQNLLYFLSKKLGVENIDLDETMVDEYIGWAIAACGIYFQLIHGFSLSFPFSLILFPLNIVEFALEWVVTWL 367
BLAST of mRNA_E_fasciculatus_S2_contig9569.17582.1 vs.
Match: Hypothetical (protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WUS9_9SPIT) HSP 1 Score: 228 bits (582), Expect = 2.520e-66 Identity = 120/320 (37.50%), Postives = 189/320 (59.06%), Query Frame = 1
Query: 1 EDRRVEDMILKVAGKSPPWLANFLRAFAPFVTLTFTIANIVGPVVVKFYALLYKVYKILPVNVLGMIYGLVMCFFGGFFHVTIAAIEAFNMTGGEKVMLCVHDLKQDIKALHYASKEDDKRDDDHDGIPDVKQISPEKLLTRKTALALRVVNPDRATNAITGIWQGYMGVLVVLKFRFAKVIALAVSIGNNLRPIVAKIFGPALAFVIPREYHQWIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLMYFVSEVTPLKLDPDNSFLDEVLGWTLAACGAYFQTSINWDLPWAVDLVLWPAYLLETFLKWSV 960
E RV +I +++ K P ++ +++ AP + + I P +V+ + ++ LP ++ I G +CFFGG F TIAA EA+ + GG + + C L + K + A+ DDK+D + DG PDV+Q++P++L+ K +AL+ VNPD ++ I G++ G++GVL +LK +FAK + L IG L AK F P + ++P EY +W+ + + CK A+TVAWW+ R+IS SAI+GGLLF + L+ ++ E LK D +DE +GW +A G FQ + + +P+ +LVLWP LLE F+ WSV
Sbjct: 21 ETLRVTKIIEELSTKVPAKVSPYVKQAAPVLATAWVYFMIALPYIVEGITKVQELVMQLPEKIVYAILGFCVCFFGGIFPATIAAAEAWQLCGGCEAIECCKQLYNEFKKVQDANDADDKKDANKDGKPDVQQMAPKELIVHKAQVALKAVNPDTVSDGIVGLYTGWVGVLAILKIKFAKTVTLGEKIGEQLYE-PAKKFEPMIEGMVPEEYRKWVPVAVRWTCKVSAITVAWWVSRVISAFHSAIRGGLLFGKYLVDYLHERGILKSDSSAQSMDEAIGWGVALAGLLFQFATGFGVPFPFNLVLWPLQLLEAFIVWSV 339
BLAST of mRNA_E_fasciculatus_S2_contig9569.17582.1 vs.
Match: Hypothetical (protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1Z0D1_9DINO) HSP 1 Score: 229 bits (583), Expect = 4.500e-66 Identity = 121/324 (37.35%), Postives = 195/324 (60.19%), Query Frame = 1
Query: 1 EDRRVEDMILKVAGKSPPWLANFLRAFAPFVTLTFTIANIVGPVVVKFYALLYKVYKILPVNVLGMIYGLVMCFFGGFFHVTIAAIEAFNMTGGEKVMLCVHDLKQDIKALHYASKEDDKRDDDHDGIPDVKQISPEKLLTRKTALALRVVNPDRATNAITGIWQGYMGVLVVLKFRFAKVIALAVSIGNNLRPIVAKIFGPALAFVIPREYHQWIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLMYFVSEVTPLK-LDPDNSFLDEVLGWTLAACGAYFQTSINWDLPWAVDLVLWPAYLLETFLKWSVTWM 969
E RV + L A + P ++ + + P+ I +V P VV Y Y +LP+ + IYGL +CFFGG + V I+AIEAF M+GG+ + C +D+ ++ L ++ED++ D D+DGI DV QIS +L+ RK L + ++PD+ T A+ G++QG++ VL+ +KF+FA+ IALAVS+ R A + P LA +P WI I+Y K +A+ AW +Q+++ VQSAIKGG +F+++L+ F++ ++ +D D + +DE +GW +AA G YFQ + L + +VL+P ++E L+W+VTW+
Sbjct: 50 ERARVARLALAAAARPPGYVYDVMEKALPYWNKFLEIMAVVLPNVVWAYEKCRDFYAMLPIEIACCIYGLGICFFGGTYVVAISAIEAFKMSGGDTIEACWNDICEECSLLVEKNEEDNEEDLDNDGIADVLQISQRELMQRKVKLVVTSIDPDKLTKAVGGLYQGFLSVLMTVKFQFAQAIALAVSMAEQARKPAAVVLTPILASALPPNSEDWIVTAIDYLTKTIALLFAWTLQKMVCAVQSAIKGGHMFAQNLLLFLANKLGVENIDLDETMVDEYIGWAIAAMGVYFQIVHGFALVFPFSIVLFPLNIIEFSLEWTVTWL 373 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9569.17582.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9569.17582.1 >prot_E_fasciculatus_S2_contig9569.17582.1 ID=prot_E_fasciculatus_S2_contig9569.17582.1|Name=mRNA_E_fasciculatus_S2_contig9569.17582.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=324bp MILKVAGKSPPWLANFLRAFAPFVTLTFTIANIVGPVVVKFYALLYKVYKback to top mRNA from alignment at E_fasciculatus_S2_contig9569:449..5762- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9569.17582.1 ID=mRNA_E_fasciculatus_S2_contig9569.17582.1|Name=mRNA_E_fasciculatus_S2_contig9569.17582.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5314bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9569:449..5762- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9569:449..5762- >mRNA_E_fasciculatus_S2_contig9569.17582.1 ID=mRNA_E_fasciculatus_S2_contig9569.17582.1|Name=mRNA_E_fasciculatus_S2_contig9569.17582.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=972bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9569:449..5762- (Ectocarpus fasciculatus EfasUO2)back to top |