mRNA_E_fasciculatus_S2_contig956.17575.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig956.17575.1
Unique NamemRNA_E_fasciculatus_S2_contig956.17575.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig956.17575.1 vs.
Match: Intraflagellar (transport protein 172 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB7_ECTSI)

HSP 1 Score: 498 bits (1283), Expect = 7.000e-162
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 1 
Query:    1 MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGLSIVAAGNDGQVVFYDADGGMERTFDYSSD 726
            MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGLSIVAAGNDGQVVFYDADGGMERTFDYSSD
Sbjct:    1 MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGLSIVAAGNDGQVVFYDADGGMERTFDYSSD 242
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig956.17575.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU1_9PHAE)

HSP 1 Score: 411 bits (1056), Expect = 2.730e-141
Identity = 198/200 (99.00%), Postives = 199/200 (99.50%), Query Frame = 1 
Query:  127 ADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGLSIVAAGNDGQVVFYDADGGMERTFDYSSD 726
            ADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDS RLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVP+ALSWGLSIVAAGNDGQVVFYDADGGMERTFDYSSD
Sbjct:    2 ADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSARLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPFALSWGLSIVAAGNDGQVVFYDADGGMERTFDYSSD 201
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig956.17575.1 vs.
Match: Uncharacterized (protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVD3_9STRA)

HSP 1 Score: 351 bits (901), Expect = 1.270e-113
Identity = 169/242 (69.83%), Postives = 194/242 (80.17%), Query Frame = 1 
Query:    1 MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGA-PSHTKLVIHPSVPYALSWGLSIVAAGNDGQVVFYDADGGMERTFDYSS 723
            MQLRHL T++ P  GEGG    + KV A+AWAPNNRKLAVCTADRVV L+DENGEKRD+FSTKPA+KGPKNY+VR +                  FVYKLG EWGE KSICNKFPQPSP+T ++W +ARPN++VFGLA+GKVKIGQL++N+PATLYN DSF AALA S DGNGVVSAHADG +YRFLFDD+G  PSH +L +HP VPYALSWG SIVAAGND QVVFY  DGG+ERTFDYS+
Sbjct:    1 MQLRHLQTVLAPP-GEGGS-LPLQKVTAIAWAPNNRKLAVCTADRVVTLFDENGEKRDKFSTKPADKGPKNYMVRAMXXXXXXXXXXXXXXXXXXFVYKLGAEWGEKKSICNKFPQPSPVTALTWADARPNDIVFGLADGKVKIGQLRTNKPATLYNADSFVAALAASADGNGVVSAHADGAIYRFLFDDSGGGPSHARLAVHPCVPYALSWGRSIVAAGNDCQVVFYGVDGGLERTFDYSN 240
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig956.17575.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZTU4_9STRA)

HSP 1 Score: 302 bits (773), Expect = 3.590e-99
Identity = 148/257 (57.59%), Postives = 191/257 (74.32%), Query Frame = 1 
Query:    1 MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALYDE-NGEKRDRFSTKPAEK-------------GPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGLSIVAAGNDGQVVFYDADGGMERTFDYSSD 726
            MQLRHL+T++ P  G       M KV A+AW+PNNR+LAV T +RVV ++D   GE++D+FSTKPAEK             G KNY+V+ L FSPDS++LAVAQSD+IVF+YKLGL+WG+ KSICNKF Q + +T M WP + PNE+VFGL++GKVK+GQL+SN+PATLY   S+ + L T+ +G  ++S+H D ++YRF+FDD NG  S TK+ IH  VPYALSWG +IVAAGND +V FYD DGG  R+FDYSSD
Sbjct:    1 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKVPPATTAMYLACVGDKNYLVKALAFSPDSSKLAVAQSDNIVFIYKLGLDWGDKKSICNKFLQTASVTSMVWPTSHPNEIVFGLSDGKVKLGQLRSNKPATLYATGSYVSTLCTNVEGTAILSSHYDHSIYRFIFDDVNGGSSQTKIAIHSCVPYALSWGEAIVAAGNDRKVTFYDKDGGTVRSFDYSSD 250
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig956.17575.1 vs.
Match: Intraflagellar (Transport Protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC42_9STRA)

HSP 1 Score: 324 bits (831), Expect = 1.900e-98
Identity = 154/244 (63.11%), Postives = 194/244 (79.51%), Query Frame = 1 
Query:    1 MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALYDE-NGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGLSIVAAGNDGQVVFYDADGGMERTFDYSSD 726
            MQLRHL+T++ P  G       M KV A+AW+PNNR+LAV T +RVV ++D   GE++D+FSTKPAEKG KNY+VR L FSPDS++LAVAQSD+IVF+YKLGLEWG+ KSICNKF Q S +T M WP A PNE+VFGLA+GKVK+GQL+SN+PATLY+  S+ A + T+P+G  ++S+H D ++YRF+FDD NG  + TK+ +H  VPYALSWG SIVAAGND +V FYD DGGM R+FDYSSD
Sbjct:  978 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKGDKNYVVRALAFSPDSSKLAVAQSDNIVFIYKLGLEWGDKKSICNKFAQASSVTSMIWPVAHPNEIVFGLADGKVKLGQLRSNKPATLYSTGSYVATMCTNPEGTAILSSHYDQSIYRFIFDDVNGGSTQTKIALHTCVPYALSWGESIVAAGNDRKVTFYDKDGGMVRSFDYSSD 1214
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig956.17575.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EVR2_9STRA)

HSP 1 Score: 311 bits (797), Expect = 6.970e-96
Identity = 148/244 (60.66%), Postives = 191/244 (78.28%), Query Frame = 1 
Query:    1 MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALYDE-NGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGLSIVAAGNDGQVVFYDADGGMERTFDYSSD 726
            MQLRHL+T++ P  G       M KV A+AW+PNNR+LAV T +RVV ++D   GE++D+FSTKPAEKG KNY+V+ L FSPDS++LAVAQSD+IVF+YKLGL+WG+ KSICNKF Q + +T M WP + PNE+VFGL++GKVK+GQL+SN+PATLY   S+ + L T+ +G  ++S+H D ++YRF+FDD NG  S TK+ IH  VPYALSWG +IVAAGND +V FYD DGG  R+FDYSSD
Sbjct:    1 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKGDKNYLVKALAFSPDSSKLAVAQSDNIVFIYKLGLDWGDKKSICNKFLQTASVTSMVWPTSHPNEIVFGLSDGKVKLGQLRSNKPATLYATGSYVSTLCTNVEGTAILSSHYDHSIYRFIFDDVNGGSSQTKIAIHSCVPYALSWGEAIVAAGNDRKVTFYDKDGGTVRSFDYSSD 237
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BLAST of mRNA_E_fasciculatus_S2_contig956.17575.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJC7_PYTOL)

HSP 1 Score: 315 bits (808), Expect = 2.160e-95
Identity = 151/244 (61.89%), Postives = 198/244 (81.15%), Query Frame = 1 
Query:    1 MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALYD-ENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGLSIVAAGNDGQVVFYDADGGMERTFDYSSD 726
            MQLRHL +++ PAT EG     M KV AVAW+PNN++LAV T DRVV ++D + GE++D+FSTKPA+KG KNYIVR+L FSPDS++LAVAQSD+IVF+YK+GL+WG+ KSICNKFPQ + IT ++WP   PNE+VFGLA+GKVKIGQL+SN+PATLY   S+ + + ++ +G  ++S H DG+++RF+FDD  G P++TK+ +H  VPYALSWG SIVAAGND +V FYD DGG+ RTFDYS+D
Sbjct:    1 MQLRHLTSLL-PAT-EG-----MCKVTAVAWSPNNKRLAVVTVDRVVHMFDAQTGERKDKFSTKPADKGEKNYIVRELVFSPDSSKLAVAQSDNIVFIYKIGLDWGDKKSICNKFPQSTSITALTWPNTHPNEIVFGLADGKVKIGQLRSNKPATLYASGSYVSTVCSNMEGTAILSGHYDGSIFRFVFDDVTGGPTNTKITVHSCVPYALSWGESIVAAGNDRRVAFYDRDGGLIRTFDYSND 237
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig956.17575.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RE83_9CHLO)

HSP 1 Score: 296 bits (758), Expect = 2.660e-95
Identity = 144/246 (58.54%), Postives = 185/246 (75.20%), Query Frame = 1 
Query:    1 MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAE-KGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNV--DSFCAALATSPDGNGVVSAHADGTLYRFLFDDNG-APSHTKLVIHPSVPYALSWGLSIVAAGNDGQVVFYDADGGMERTFDYSSD 726
            MQLRHL   + P  G       +SKV  + W+ N+R++AV T DR+V L+DENG+++D+FSTKPA+  G KNY+VR + FSPDS++LA+ QSD+IVFVYKLG EWG+ KSICNKF Q S ITC++WP  + +EVVFGLAEGKVK+GQL+SN+PATLY     S+  +L +SPDG  ++S H DGT+YRF FDD    PS++KL  HP VPYALSWG SI  AG+D +VVFYDA+GG+ + FDYS D
Sbjct:    1 MQLRHLKCALPPTEG-------ISKVTTITWSSNSRRMAVVTTDRIVHLFDENGDRKDKFSTKPADPSGAKNYVVRGMAFSPDSSKLAIGQSDNIVFVYKLGTEWGDKKSICNKFHQSSAITCITWPHQQHHEVVFGLAEGKVKVGQLRSNKPATLYAHPDQSYVVSLCSSPDGRAILSGHLDGTIYRFYFDDGVLGPSNSKLTTHPVVPYALSWGESICVAGSDCKVVFYDAEGGVLQHFDYSGD 239
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig956.17575.1 vs.
Match: Intraflagellar (transport protein 172 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AMT9_PLAHL)

HSP 1 Score: 313 bits (803), Expect = 1.010e-94
Identity = 151/244 (61.89%), Postives = 191/244 (78.28%), Query Frame = 1 
Query:    1 MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALYD-ENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGLSIVAAGNDGQVVFYDADGGMERTFDYSSD 726
            MQLRHL +++Q   G       M KV A+A++PNNR+LAV T DRVV L+D + GE++D+FSTKPA+KG K+YIVR L FSPDS +LAVAQSD+I+FVYK+GLE+G+ KSICNKFPQ S +T ++WP   PNE+VFGLA+GKVKIG L+SN+PATLY   S+ + + ++PDG  ++SAH DG +YRF+FDD  G P+H KLV+H  +PYALSWG SIVAAGND +V FYD DG   RTFDYSSD
Sbjct:    1 MQLRHLTSLLQATEG-------MCKVTAIAYSPNNRRLAVVTVDRVVHLFDGQTGERKDKFSTKPADKGDKHYIVRALEFSPDSCKLAVAQSDNIIFVYKIGLEFGDKKSICNKFPQTSSVTSLTWPSTHPNEIVFGLADGKVKIGHLRSNKPATLYATGSYVSQVCSNPDGTAILSAHYDGAIYRFIFDDVTGGPTHAKLVVHSCIPYALSWGDSIVAAGNDRRVSFYDKDGAQLRTFDYSSD 237
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig956.17575.1 vs.
Match: IFT172 (protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BFQ9_9DINO)

HSP 1 Score: 293 bits (751), Expect = 1.550e-94
Identity = 132/221 (59.73%), Postives = 175/221 (79.19%), Query Frame = 1 
Query:   67 MSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNG-APSHTKLVIHPSVPYALSWGLSIVAAGNDGQVVFYDADGGMERTFDYSSD 726
            M KV AV W+PNNR+LA+ T D+VV L+DENGE+RD+FSTKPA+K  K+Y++  + FSPDS++LAVAQSD+IVFVYKLGLEWG+ K+ICNKF Q S +T ++WP+A PNEV FGL +GKVKIGQL++N+ ATLY  DSF  ++ +SPDG+ ++S H DG++YRF F + G  P+  K  +H +VPYALSWG S++AAGND +V FYD  G ++RTFDY  +
Sbjct:    1 MCKVTAVCWSPNNRRLAIVTVDKVVHLFDENGERRDKFSTKPADKTNKSYMITGMSFSPDSSKLAVAQSDNIVFVYKLGLEWGDKKTICNKFLQTSSVTALTWPKAHPNEVAFGLQDGKVKIGQLRNNKAATLYTTDSFTVSMCSSPDGHALLSGHLDGSIYRFHFGEGGQGPAQGKFAVHSAVPYALSWGASVLAAGNDRKVSFYDTQGNLQRTFDYDGE 221
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig956.17575.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Intraflagellar7.000e-162100.00transport protein 172 n=1 Tax=Ectocarpus siliculos... [more]
Uncharacterized2.730e-14199.00protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 131... [more]
Uncharacterized1.270e-11369.83protein n=2 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized3.590e-9957.59protein (Fragment) n=1 Tax=Aphanomyces astaci TaxI... [more]
Intraflagellar1.900e-9863.11Transport Protein n=1 Tax=Thraustotheca clavata Ta... [more]
Uncharacterized6.970e-9660.66protein (Fragment) n=2 Tax=Aphanomyces astaci TaxI... [more]
Uncharacterized2.160e-9561.89protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Hypothetical2.660e-9558.54protein (Fragment) n=1 Tax=Pyramimonas obovata Tax... [more]
Intraflagellar1.010e-9461.89transport protein 172 n=1 Tax=Plasmopara halstedii... [more]
IFT1721.550e-9459.73protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig956contigE_fasciculatus_S2_contig956:21023..23747 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score500.0
Seed ortholog evalue6.3e-139
Seed eggNOG ortholog2880.D8LUB7
Preferred nameIFT172
Model size726
KEGG koko:K19676
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000226,GO:0001501,GO:0001654,GO:0001655,GO:0001822,GO:0001838,GO:0001841,GO:0001843,GO:0001894,GO:0001895,GO:0001947,GO:0002009,GO:0002119,GO:0002164,GO:0003002,GO:0003007,GO:0003143,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005815,GO:0005856,GO:0005871,GO:0005875,GO:0005929,GO:0005930,GO:0006355,GO:0006357,GO:0006508,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007224,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0008134,GO:0008150,GO:0008152,GO:0008285,GO:0008544,GO:0008589,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009798,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009953,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010970,GO:0014020,GO:0015630,GO:0016043,GO:0016331,GO:0016485,GO:0019219,GO:0019222,GO:0019538,GO:0021510,GO:0021515,GO:0021517,GO:0021522,GO:0021915,GO:0021953,GO:0022008,GO:0022607,GO:0022611,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030705,GO:0030990,GO:0030992,GO:0031122,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031503,GO:0031514,GO:0031982,GO:0032006,GO:0032501,GO:0032502,GO:0032838,GO:0032991,GO:0035050,GO:0035148,GO:0035239,GO:0035295,GO:0035735,GO:0035869,GO:0036064,GO:0036126,GO:0040024,GO:0042073,GO:0042127,GO:0042592,GO:0042995,GO:0043009,GO:0043010,GO:0043053,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044238,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0045494,GO:0045880,GO:0045892,GO:0045934,GO:0046907,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048562,GO:0048565,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048646,GO:0048699,GO:0048729,GO:0048731,GO:0048736,GO:0048793,GO:0048856,GO:0048869,GO:0048871,GO:0050678,GO:0050680,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0055115,GO:0055123,GO:0060021,GO:0060041,GO:0060173,GO:0060249,GO:0060255,GO:0060271,GO:0060322,GO:0060348,GO:0060429,GO:0060562,GO:0060606,GO:0060972,GO:0061371,GO:0061525,GO:0065007,GO:0065008,GO:0070925,GO:0070986,GO:0071704,GO:0071840,GO:0072001,GO:0072175,GO:0072359,GO:0080090,GO:0097014,GO:0097223,GO:0097225,GO:0097228,GO:0097435,GO:0097542,GO:0097598,GO:0097708,GO:0097729,GO:0097730,GO:0099111,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901564,GO:1902531,GO:1902679,GO:1903506,GO:1903507,GO:1905515,GO:2000112,GO:2000113,GO:2001141
Exons5
EggNOG free text desc.cilium assembly
EggNOG OGsKOG3616@1,KOG3616@2759
Cds size726
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842602.8456726-CDS-E_fasciculatus_S2_contig956:21022..211481696842602.8456726-CDS-E_fasciculatus_S2_contig956:21022..21148Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig956 21023..21148 +
1696842602.8597276-CDS-E_fasciculatus_S2_contig956:21878..220701696842602.8597276-CDS-E_fasciculatus_S2_contig956:21878..22070Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig956 21879..22070 +
1696842602.8712459-CDS-E_fasciculatus_S2_contig956:22506..227621696842602.8712459-CDS-E_fasciculatus_S2_contig956:22506..22762Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig956 22507..22762 +
1696842602.883435-CDS-E_fasciculatus_S2_contig956:23169..232641696842602.883435-CDS-E_fasciculatus_S2_contig956:23169..23264Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig956 23170..23264 +
1696842602.902044-CDS-E_fasciculatus_S2_contig956:23690..237471696842602.902044-CDS-E_fasciculatus_S2_contig956:23690..23747Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig956 23691..23747 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig956.17575.1prot_E_fasciculatus_S2_contig956.17575.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig956 21023..23747 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig956.17575.1

>prot_E_fasciculatus_S2_contig956.17575.1 ID=prot_E_fasciculatus_S2_contig956.17575.1|Name=mRNA_E_fasciculatus_S2_contig956.17575.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=242bp
MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALY
DENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKL
GLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSN
RPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLV
IHPSVPYALSWGLSIVAAGNDGQVVFYDADGGMERTFDYSSD
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mRNA from alignment at E_fasciculatus_S2_contig956:21023..23747+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig956.17575.1 ID=mRNA_E_fasciculatus_S2_contig956.17575.1|Name=mRNA_E_fasciculatus_S2_contig956.17575.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2725bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig956:21023..23747+ (Ectocarpus fasciculatus EfasUO2)
ATGCAGCTGCGGCATCTGAACACGATCATACAGCCGGCCACGGGCGAGGG
CGGTGATGGCGCCAAGATGTCGAAGGTCATGGCTGTGGCGTGGGCACCGA
ACAACCGCAAGCTGGCGGTGTGCACGGTGAGCGATATCGTGGGTCAGGGT
CTTGCTGGCAGTGAGATGCAGACGAGACGATAGACGCTAGGCTGGCAAAA
TCGCGCAGTACCAGTCAGTGTAGTATGTTATTTTACTGGGAACCACTTTT
TTTGCTGTTGTATTGACTACGGACGGTGTTCTCATGTACTGCTGCTGTGT
ATTTCTACTCCTTTTTAGTACGAAGAACGAAGTACCATTTAGCAATACTG
CTGTAAACCAAGGCGTAGATCGTGCCAAACTTGTAACAAGTCGGTTTATC
TATAGACCCCCTGAGGGAAATGCTGGGCGGCGTGAGTGAGGTTAGCCTGT
TCGTGAAAACAAGCCTCACGCAATATCCTGCCCCCTCGATCGAACATGTT
CACGGGAAACATGGCATTACACTACTACTGCTGTTGTACGCACGTGAGGT
GACATCTAGTAGTACGGGACGTGGGCACCGGCCCACAAGAACACTAGGTT
TGTGAACCGTCAGGCGCCCAAAACCCCGAGTCGATCCCTCTTGGATCAGA
TGGTGATACCGATCGCACGTACTGTGGTCGGGCCTGTCTCCCCTCCAACC
TCGGAAGAAGTAGCTCTAGTTTCGAATTCGGCTGTCCGTTTCTGACGAAA
GGAAGCCTCCATCAACTACACTTTGGCAAGCAATACGCCAGCCAGCACCT
CCCCCCCACACACACACACGCTTGCCCGCGGTCCCCTTCGCCCTCTCCGA
CACAAGGCCGACCGAGTGGTTGCTCTGTACGACGAGAACGGGGAGAAGCG
AGACAGGTTCTCCACCAAGCCCGCAGAGAAGGGTCCAAAGAACTACATCG
TCAGAGACCTGTGCTTCAGCCCCGACAGCACGAGGCTCGCGGTCGCGCAG
AGCGACTCCATCGTTTTCGTCTACAAGCTAGGACTGGAGTGGGGCGAGGT
ACACGTCTGCCCTTGAGTCATTATGAGAAGCCCTGGAGTCACCGCCATTG
GACTGTGCCTGTACTCGCCAGTCTCGTCTAAAAGCCCTTGAGTCACCGCC
ATGGGACTGTGCCTGTATTCGCCCTTCTCGTCTAGGGTATTGTGGAGCGA
AAAGAGGCTGTGCCCGCTCTCTGCGGGGCTCCAAAACATGCTGAATACGT
TCGCACTCCTGTCTTTACATAGTCTTCTAAGGCACCTATCCCGCTGTTGC
TGAAAACCGGCGCCTAGGGAAAGGCTCCGTCCTCGTTGTCGTTGTTGTAG
TCGTTGGTGCAAGTGTCCCCTCGCATGAGATCTTCTTCTGTGGCGCCTTG
AATCACCGCACCTCTTTGACACCTCTCCTTGCACGCATCCCGTGCACCAC
ACCTACTCGCTCTACCCCGCTCCAAACCGAGCAGAGCAAGAGCATCTGCA
ACAAGTTCCCGCAGCCGTCACCGATCACGTGCATGTCGTGGCCGGAGGCG
AGGCCCAACGAGGTCGTCTTCGGGCTGGCAGAGGGGAAGGTGAAGATCGG
ACAGCTCAAGTCCAACAGGCCCGCGACGCTGTACAACGTGGACAGCTTCT
GCGCGGCGCTGGCGACGAGCCCCGACGGCAACGGGGTGGTGTCCGCCCAC
GCCGACGGGACCCTCTACAGGTTTCTCTTCGACGACAACGGTGCGTTTTT
TCTCGTTCTCTATCAGAACCACCTGTCTGTGCGTGCGCCTGCTTAGATAG
TCTTGTCACGTTATGTTTTCGGCAGAAATGAGCGTGAGGTTTGTTTGCGG
TCAGATGTCTTGGCTCCCACGATGATGGACGTTTCACGAAACAGGACCTA
CCGCACACAACAGTACTGCTGGGTTTCACCCCTCTTGAACAGACAAGGCC
GAAAGTAAACAAAACAAACTCACGGCCAACAACGTCGACACAAGTTACAT
ACACCGCTCCACGAGTAGTATCAGATTATTGGGTGTTTGCTGCGCTTTCA
TCAAGCCGATGCAATGTACCCATTTTTGCTGGTCTACCTTTTGTGTTTAC
TACAACAATTGGTCACTCACGTATGCATGTGTGCACGGTGGACGCAGGTG
CTCCATCCCACACGAAGCTCGTCATACACCCTTCTGTGCCATACGCGCTA
AGCTGGGGCCTCAGCATTGTCGCTGCGGGGAACGACGGTCAGGTGTGTAT
GTATGTGTGTGTCATACTGTACCGCGCTAACCGGCTGACCAATGAAAATA
CGGTCTCAGTGCGGCTGAAAACAGAATAAACGCTTCTAAAAAGCCAATGA
TCTGAAACCCCGTGAGGGGGCGTCCTGGGGGAGGCTAGGCTGGTCTCCGG
TGTGTGTATATGTATCATGCGCAATCAACCGCTTCATTCTACCCTGCTCG
TCCCTGTTCGTCATTGTTTTCACCCATCTATGGGGTTATCGATCCTATTT
TCACATACTTCGAAGTAGTGCAGTAGTTCACCCCAAGCGACTTTCGCCTT
TGCTGCCTTCCGAACTTTTTTCGCCGCCCCTACATATACATGCAGCGTAT
CTGCTAATGTACACCATGACGGACGTCCCGTACGCATTTTCCACCTTTGT
CTTTCGTTGGCGTTTCAGGTGGTTTTCTATGACGCAGACGGTGGCATGGA
GCGCACGTTTGACTACTCGTCGGAT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig956:21023..23747+

>mRNA_E_fasciculatus_S2_contig956.17575.1 ID=mRNA_E_fasciculatus_S2_contig956.17575.1|Name=mRNA_E_fasciculatus_S2_contig956.17575.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=726bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig956:21023..23747+ (Ectocarpus fasciculatus EfasUO2)
ATGCAGCTGCGGCATCTGAACACGATCATACAGCCGGCCACGGGCGAGGG
CGGTGATGGCGCCAAGATGTCGAAGGTCATGGCTGTGGCGTGGGCACCGA
ACAACCGCAAGCTGGCGGTGTGCACGGCCGACCGAGTGGTTGCTCTGTAC
GACGAGAACGGGGAGAAGCGAGACAGGTTCTCCACCAAGCCCGCAGAGAA
GGGTCCAAAGAACTACATCGTCAGAGACCTGTGCTTCAGCCCCGACAGCA
CGAGGCTCGCGGTCGCGCAGAGCGACTCCATCGTTTTCGTCTACAAGCTA
GGACTGGAGTGGGGCGAGAGCAAGAGCATCTGCAACAAGTTCCCGCAGCC
GTCACCGATCACGTGCATGTCGTGGCCGGAGGCGAGGCCCAACGAGGTCG
TCTTCGGGCTGGCAGAGGGGAAGGTGAAGATCGGACAGCTCAAGTCCAAC
AGGCCCGCGACGCTGTACAACGTGGACAGCTTCTGCGCGGCGCTGGCGAC
GAGCCCCGACGGCAACGGGGTGGTGTCCGCCCACGCCGACGGGACCCTCT
ACAGGTTTCTCTTCGACGACAACGGTGCTCCATCCCACACGAAGCTCGTC
ATACACCCTTCTGTGCCATACGCGCTAAGCTGGGGCCTCAGCATTGTCGC
TGCGGGGAACGACGGTCAGGTGGTTTTCTATGACGCAGACGGTGGCATGG
AGCGCACGTTTGACTACTCGTCGGAT
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