mRNA_E_fasciculatus_S2_contig9497.17526.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9497.17526.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K143_9PHAE) HSP 1 Score: 209 bits (531), Expect = 1.640e-64 Identity = 95/119 (79.83%), Postives = 108/119 (90.76%), Query Frame = 1
Query: 28 MPMFDRGHGGYRVEGVPKCGSCLRSEHPNLAKKFKVRTEHFVLAELQRRMPELEDNLLSWDCPLPCAISTERADMLWQIGSTLLHVEVDETATHEDDRNRIMRLLAGTNAIDHIVVRIH 384
P+ +RG G Y++E V KCGSC+RSEH +L K+FKV+TEHFVLAELQRRMPELE+N LSWDCPLPCAISTERADMLWQIGSTLLHVEVDE ATHEDDR R+MRLLAGT+++DHIVVRIH
Sbjct: 211 FPILERGRGRYKIEWVNKCGSCVRSEHLDLLKRFKVKTEHFVLAELQRRMPELENNFLSWDCPLPCAISTERADMLWQIGSTLLHVEVDEIATHEDDRKRLMRLLAGTDSVDHIVVRIH 329
BLAST of mRNA_E_fasciculatus_S2_contig9497.17526.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L073_9PHAE) HSP 1 Score: 209 bits (531), Expect = 4.460e-60 Identity = 99/119 (83.19%), Postives = 106/119 (89.08%), Query Frame = 1
Query: 28 MPMFDRGHGGYRVEGVPKCGSCLRSEHPNLAKKFKVRTEHFVLAELQRRMPELEDNLLSWDCPLPCAISTERADMLWQIGSTLLHVEVDETATHEDDRNRIMRLLAGTNAIDHIVVRIH 384
PM +RG G YR++ CGSCLRSEHP+LAKKFKVRTEHFVLAELQRRMPELE N LSWDCPLP AISTERADMLWQIGS LLHVEVDETATHEDDRNR+MRLLAGT+A+ HIVVRIH
Sbjct: 2120 FPMIERGCGTYRIDDDFLCGSCLRSEHPDLAKKFKVRTEHFVLAELQRRMPELEGNFLSWDCPLPYAISTERADMLWQIGSVLLHVEVDETATHEDDRNRLMRLLAGTDAVHHIVVRIH 2238
BLAST of mRNA_E_fasciculatus_S2_contig9497.17526.1 vs.
Match: Uncharacterized (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9E0R6_SYMMI) HSP 1 Score: 85.5 bits (210), Expect = 5.120e-18 Identity = 52/135 (38.52%), Postives = 78/135 (57.78%), Query Frame = 1
Query: 19 CITMPMFDRGHGGYRV-------EGVPKCGSCLRSEHPNLAKKFKVRTEHFVLAELQRRMPELEDNL--LSWDCPLPCAISTERADMLWQIGSTLLHVEVDETATHED----DRNRIMRLLAGTNAIDHIVVRIH 384
CI+ P R G +R EG P+C SCL +++P+ A K KVR EH +LAELQRR+P L + L WDCP+P + +R DML+++ + +EVDE HED D + + L+A + +V+R++
Sbjct: 21 CISPPTA-RVKGRFRAAARFRSPEGHPQCWSCLAAQYPDRA-KLKVRKEHLMLAELQRRLPWLGEKAEQLIWDCPVPGGCTLKRPDMLFRLEDRFVQIEVDEEG-HEDLSCADEDSRLELIAADVGLPGLVLRLN 152
BLAST of mRNA_E_fasciculatus_S2_contig9497.17526.1 vs.
Match: Putative (WRKY transcription factor 19 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DPX8_SYMMI) HSP 1 Score: 86.7 bits (213), Expect = 9.330e-18 Identity = 52/132 (39.39%), Postives = 76/132 (57.58%), Query Frame = 1
Query: 7 ESSACITMPMFDRGHGGYRVEGVPKCGSCLRSEHPNLAKKFKVRTEHFVLAELQRRMPELEDNL--LSWDCPLPCAISTERADMLWQIGSTLLHVEVDETATHED----DRNRIMRLLAGTNAIDHIVVRIH 384
E+ A + P F R EG P C SCL +++P+ A K KVR EH +LAELQRR+P L + L WDCP+P + +R DML+++ + VEVDE HED D + + L+A + +V+R++
Sbjct: 102 EACALLAPPPFARFRSS---EGQPLCWSCLAAQYPDRA-KLKVRKEHLMLAELQRRLPWLGEKAEQLIWDCPVPGGCTLKRPDMLFRLEDRFVQVEVDEEG-HEDLSCADEDSRLELIAADVGLPGLVLRLN 228
BLAST of mRNA_E_fasciculatus_S2_contig9497.17526.1 vs.
Match: Hypothetical (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Z177_SYMMI) HSP 1 Score: 81.6 bits (200), Expect = 3.230e-16 Identity = 49/135 (36.30%), Postives = 76/135 (56.30%), Query Frame = 1
Query: 1 KCESSACITMPMFDRGHGGYR-VEGVPKCGSCLRSEHPNLAKKFKVRTEHFVLAELQRRMPELED--NLLSWDCPLPCAISTERADMLWQIGSTLLHVEVDETATHED----DRNRIMRLLAGTNAIDHIVVRIH 384
+C+S+ C + H G++ G C CL +++P A K KVR EH +LAELQRR+P L + L WDCP+P + +R DML+++ + VEVDE HED D + + L+A + +V+R++
Sbjct: 66 RCQSAVCSALE--SPPHAGFKDPAGRALCWPCLGAQYPERA-KLKVRKEHLMLAELQRRLPWLGEWAQQLIWDCPVPGGCTLKRPDMLFRLEDRFVQVEVDEEG-HEDLSCADEDSRLELIAADVGLPGLVLRLN 196
BLAST of mRNA_E_fasciculatus_S2_contig9497.17526.1 vs.
Match: Uncharacterized (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9C100_SYMMI) HSP 1 Score: 81.3 bits (199), Expect = 3.470e-16 Identity = 48/135 (35.56%), Postives = 76/135 (56.30%), Query Frame = 1
Query: 1 KCESSACITMPMFDRGHGGYR-VEGVPKCGSCLRSEHPNLAKKFKVRTEHFVLAELQRRMPELED--NLLSWDCPLPCAISTERADMLWQIGSTLLHVEVDETATHED----DRNRIMRLLAGTNAIDHIVVRIH 384
+C+S+ C + H G++ G C CL +++P A K KVR EH +LAELQRR+P L + L WDCP+P + +R DML+++ + +EVDE HED D + + L+A + +V+R++
Sbjct: 49 RCQSAVCSALE--SPPHAGFKDPAGRALCWPCLGAQYPERA-KLKVRKEHLMLAELQRRLPWLGEWAQQLIWDCPVPGGCTLKRPDMLFRLEDRFVQIEVDEEG-HEDLSCADEDSRLELIAADVGLPGLVLRLN 179
BLAST of mRNA_E_fasciculatus_S2_contig9497.17526.1 vs.
Match: WRKY19 (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812ZDW4_SYMMI) HSP 1 Score: 80.9 bits (198), Expect = 5.340e-16 Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 1
Query: 67 EGVPKCGSCLRSEHPNLAKKFKVRTEHFVLAELQRRMPELEDNL--LSWDCPLPCAISTERADMLWQIGSTLLHVEVDETATHED----DRNRIMRLLAGTNAIDHIVVRIH 384
+G P C C +++P+ A KFKVR EH +LAELQRR+P L + L WDCP+P + +R DML+++ + VEVDE H+D D + L+A + V+R++
Sbjct: 108 DGQPLCWGCFTAQYPDRA-KFKVRKEHLILAELQRRLPWLGERATQLVWDCPVPGGCTLKRPDMLYRLDDRFVQVEVDEEG-HDDLSCADEESRLELIAADVGLPGFVLRLN 217
BLAST of mRNA_E_fasciculatus_S2_contig9497.17526.1 vs.
Match: Putative (WRKY transcription factor 19 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9BX72_SYMMI) HSP 1 Score: 80.5 bits (197), Expect = 2.770e-15 Identity = 49/135 (36.30%), Postives = 75/135 (55.56%), Query Frame = 1
Query: 1 KCESSACITMPMFDRGHGGYR-VEGVPKCGSCLRSEHPNLAKKFKVRTEHFVLAELQRRMPELEDNL--LSWDCPLPCAISTERADMLWQIGSTLLHVEVDETATHED----DRNRIMRLLAGTNAIDHIVVRIH 384
+C S AC + D +R ++G C C +++P A K KVR EH +LAELQRR+P L + L WDCP+P + +R DML+++ + VEVDE HED D + + L+A + +V+R++
Sbjct: 184 RCTSEACA---LLDVRPARFRDLDGKQICWGCFTAQYPERA-KLKVRKEHLMLAELQRRLPWLGERATQLIWDCPVPGGCTLKRPDMLYRLEDRFVQVEVDEEG-HEDLSCADEDSRLELIAADVGLPGLVLRLN 313
BLAST of mRNA_E_fasciculatus_S2_contig9497.17526.1 vs.
Match: Putative (WRKY transcription factor 19 (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9BQ62_SYMMI) HSP 1 Score: 80.1 bits (196), Expect = 3.320e-15 Identity = 45/112 (40.18%), Postives = 68/112 (60.71%), Query Frame = 1
Query: 67 EGVPKCGSCLRSEHPNLAKKFKVRTEHFVLAELQRRMPELEDNL--LSWDCPLPCAISTERADMLWQIGSTLLHVEVDETATHED----DRNRIMRLLAGTNAIDHIVVRIH 384
EG P C SCL +++P+ A K KVR EH +LAELQRR+P L + L WDC +P + +R DML+++ + VE+DE HED D + + L+A + +V+R++
Sbjct: 156 EGQPLCWSCLAAQYPDRA-KLKVRKEHLMLAELQRRLPWLGERATELIWDCTVPGGCTLKRPDMLFRLEDRFVQVEIDEEG-HEDRNCADEDSRLELIAADVGLPGLVLRLN 265
BLAST of mRNA_E_fasciculatus_S2_contig9497.17526.1 vs.
Match: WRKY19 (protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813B2U5_9DINO) HSP 1 Score: 80.5 bits (197), Expect = 4.030e-15 Identity = 49/135 (36.30%), Postives = 75/135 (55.56%), Query Frame = 1
Query: 1 KCESSACITMPMFDRGHGGYR-VEGVPKCGSCLRSEHPNLAKKFKVRTEHFVLAELQRRMPELEDNL--LSWDCPLPCAISTERADMLWQIGSTLLHVEVDETATHED----DRNRIMRLLAGTNAIDHIVVRIH 384
+C S AC + D +R ++G C C +++P A K KVR EH +LAELQRR+P L + L WDCP+P + +R DML+++ + VEVDE HED D + + L+A + +V+R++
Sbjct: 171 RCTSEACA---LLDVRPARFRDLDGKQICWGCFTAQYPERA-KLKVRKEHLMLAELQRRLPWLGERATQLIWDCPVPGGCTLKRPDMLYRLEDRFVQVEVDEEG-HEDLSCADEDSRLELIAADVGLPGLVLRLN 300 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9497.17526.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9497.17526.1 >prot_E_fasciculatus_S2_contig9497.17526.1 ID=prot_E_fasciculatus_S2_contig9497.17526.1|Name=mRNA_E_fasciculatus_S2_contig9497.17526.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=119bp MPMFDRGHGGYRVEGVPKCGSCLRSEHPNLAKKFKVRTEHFVLAELQRRMback to top mRNA from alignment at E_fasciculatus_S2_contig9497:358..741+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9497.17526.1 ID=mRNA_E_fasciculatus_S2_contig9497.17526.1|Name=mRNA_E_fasciculatus_S2_contig9497.17526.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=384bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9497:358..741+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9497:358..741+ >mRNA_E_fasciculatus_S2_contig9497.17526.1 ID=mRNA_E_fasciculatus_S2_contig9497.17526.1|Name=mRNA_E_fasciculatus_S2_contig9497.17526.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=357bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9497:358..741+ (Ectocarpus fasciculatus EfasUO2)back to top |