mRNA_E_fasciculatus_S2_contig949.17520.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig949.17520.1 vs.
Match: PolyA_pol (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK47_ECTSI) HSP 1 Score: 1050 bits (2716), Expect = 0.000e+0 Identity = 621/719 (86.37%), Postives = 634/719 (88.18%), Query Frame = 3
Query: 96 MSCAKRQRTDSIGGNMAANRSREHMGPLALRPRNGRRGESAVGGTLKMNIVSCLKPNEADILAMLLEAVKHSKTGTVVRVAGGWVRDKLLGLENEDIDIALDNCTGVAFAEMVNAYLKSQGRDEGKVAVIEANPEQSKHLETARMKIMGVWVDLVNLRTEVYRSDSRIPEASLGTAEEDALRRDFTLNALFYNVNEGKVEDKTGRGVDDLRDGIIRTPLSPMITFRDDPLRVLRAVRFAARFGFALYEDLRAAARDSEIQAALGTKVSRERVGAELGGMITGKMAQPALALSLLQDLGLAAAVYAPPEHLVPPPPEGGLDWERGAAVARAAARLLEFRSSVTEGGGDEVTGGAPPTVAA-AVETVAPAEGPGAEAGLAAREGSSSAPSAGGAQPXXXXXXXGKEPANMTPRGGG-EGRVSTGGKPGSSDRKKEAPTTLVRELFLCAALLPLAGMRHKAKKGKLVSAAHSVVADSLKKLKSKEAKNVEDVLELSKTFRPLADAYVATTTSPGTSAVATK--------------TFSRLSVGLAVRQAKELWPTCVDLCCAVEMCELQQQAXXXXXXXXXXXXXXXXXXXXXXXXXATSACPGDHLEQAVDVAAXXXXXXXXXXXXXGEGKRGEEDEPFREGGKERAVIDKYAGLREAVASMDLERAWDMVPLARGNELMAELQLPKGPEIGKQMAKQASWQLEHPEGTREQCVAFLRATL 2204
MSCAKRQRTDSIGG+MAANRSREHMGPLAL PRNGRRGESAVGGTLKMNIVSCLKPNEADILAMLLEAVK+SKTGTVVRVAGGWVRDKLLGLENEDIDIALDNCTGVAFAE VNAYLKSQGRDEGKVAVIEANPEQSKHLETARMKI GVWVDLVNLRTEVYRSDSRIPEASLGTAEEDALRRDFTLNALFYNVNEGKVEDKTGRGVDDLRDGIIRTPLSPMITFRDDPLRVLRAVRFAARFGFAL+EDLRAAARDSEIQAALGTKVSRERVG EL GMITGKMAQPALALSLLQDLGLAAAVYAPPEHLVPPP +GG+DWERGAAVARAAARLLEFRSSVTE G +EVT GAP AVETVAPAEG AEAGL XXXXXXXGKEPANM+P GGG EGRVS GGKPGS D KKEAPTTLVRELFLCAALLPLAGM+HKAKKGKLVSAAHSVVADSLK LKSKEAKNVED+L+L KTFRPLADAYVA TSPGTSAVATK TFSRLSVGLAVRQAK+LWPTCVDLCCAVEMCE QQQA XXXXXXXXXXXXXXXX ACP DHLEQ V+ A XXXXXXXXXXXXX DEPFREGGKERAVI KYAGLR+AVA M LERAWDMVPLARGNELMAELQLPKGPEIGKQMAKQASWQLEHPEGTREQCVAFLRATL
Sbjct: 1 MSCAKRQRTDSIGGDMAANRSREHMGPLALTPRNGRRGESAVGGTLKMNIVSCLKPNEADILAMLLEAVKYSKTGTVVRVAGGWVRDKLLGLENEDIDIALDNCTGVAFAETVNAYLKSQGRDEGKVAVIEANPEQSKHLETARMKIRGVWVDLVNLRTEVYRSDSRIPEASLGTAEEDALRRDFTLNALFYNVNEGKVEDKTGRGVDDLRDGIIRTPLSPMITFRDDPLRVLRAVRFAARFGFALHEDLRAAARDSEIQAALGTKVSRERVGTELCGMITGKMAQPALALSLLQDLGLAAAVYAPPEHLVPPPVDGGIDWERGAAVARAAARLLEFRSSVTEAGEEEVTDGAPXXXXXXAVETVAPAEGAAAEAGLXXXXXXXXXXXXXXXXXXXXXXXXGKEPANMSPLGGGGEGRVSMGGKPGSRDGKKEAPTTLVRELFLCAALLPLAGMKHKAKKGKLVSAAHSVVADSLK-LKSKEAKNVEDILDLLKTFRPLADAYVAYPTSPGTSAVATKMEVEVDGTDREGRATFSRLSVGLAVRQAKQLWPTCVDLCCAVEMCEPQQQAPXXXXXXXXXXXXXXXXGTIF-------ACPADHLEQTVEAAXXXXXXXXXXXXXXXXXX----DEPFREGGKERAVIYKYAGLRKAVAGMGLERAWDMVPLARGNELMAELQLPKGPEIGKQMAKQASWQLEHPEGTREQCVAFLRATL 707
BLAST of mRNA_E_fasciculatus_S2_contig949.17520.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7V9_HETAK) HSP 1 Score: 315 bits (806), Expect = 1.230e-94 Identity = 164/285 (57.54%), Postives = 198/285 (69.47%), Query Frame = 3
Query: 267 EADILAMLLEAVKHSKTGTVVRVAGGWVRDKLLGLENEDIDIALDNCTGVAFAEMVNAYLKSQGRDEGKVAVIEANPEQSKHLETARMKIMGVWVDLVNLRTEVYRSDSRIPEASLGTAEEDALRRDFTLNALFYNVNEGKVEDKTGRGVDDLRDGIIRTPLSPMITFRDDPLRVLRAVRFAARFGFALYEDLRAAARDSEIQAALGTKVSRERVGAELGGMITGKMAQPALALSLLQDLGLAAAVYAPPEHLVPPPPEGGLDWERGAAVARAAARLLEFRSSVT 1121
E + A+LL A++ S + TVVRVAGGWVRDKLL +EN+DID+A+DN +GV FA +VN YL QG + K+ VI+ANP+QSKHLETAR+KI G WVD VNLRTE Y DSRIPE GTAEEDA RRDFT N+LFYN+NE K+ED TG+G DL G++RTPL P TF DDPLRVLRAVRFAARF FAL L AAAR ++ AL KV RER+G E+ GM +GK+A+PALA+ LL +L L V+ PP E W A A +L+E T
Sbjct: 2 EQKLFAVLLGAIEKSGSHTVVRVAGGWVRDKLLKMENDDIDVAVDNISGVEFASLVNEYLGEQGEETHKIGVIQANPDQSKHLETARVKIFGGWVDCVNLRTETYNEDSRIPEMRFGTAEEDAYRRDFTFNSLFYNINEEKIEDLTGKGAADLAAGVVRTPLPPEATFLDDPLRVLRAVRFAARFAFALDPALAAAARLPAVRQALADKVGRERIGTEVEGMFSGKLARPALAVGLLHELDLLQLVFTPPSDTEITASE----WNMAAEQATLVNKLVELEDMTT 282
BLAST of mRNA_E_fasciculatus_S2_contig949.17520.1 vs.
Match: Uncharacterized (protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4APV2_9CHLO) HSP 1 Score: 301 bits (770), Expect = 1.910e-86 Identity = 159/258 (61.63%), Postives = 189/258 (73.26%), Query Frame = 3
Query: 255 LKPNEADILAMLLEAVKHSKTGTVVRVAGGWVRDKLLGLENEDIDIALDNCTGVAFAEMVNAYLKSQGRDEGKVAVIEANPEQSKHLETARMKIMGVWVDLVNLRTEVYRSDSRIPEASLGTAEEDALRRDFTLNALFYNVNEGKV-EDKTGRGVDDLRDGIIRTPLSPMITFRDDPLRVLRAVRFAARFGFALYEDLRAAARDSEIQAALGTKVSRERVGAELGGMITGKMAQPALALSLLQDLGLAAAVYAPPEHL 1025
L E DI MLL AV+H+ T +R AGGWVRDKLLG ++DIDIALD+ G FAEMVN YLKSQG++ AVI++NP+QSKHLETARMKI +W+DLVNLR+E Y +DSRIP + GT E+DALRRDFT+NALFYN+ G V ED TGRG+ DLRDG+IRTPL P TF DDPLRVLRAVRF RFGF L+ D+ AA +++ AL TK+S+ERVG EL GM G P A+ LLQ LGL AV+A P L
Sbjct: 135 LTQREQDIFDMLLAAVRHAGASTSLRCAGGWVRDKLLGRGSDDIDIALDDMLGKDFAEMVNQYLKSQGKEARHAAVIQSNPDQSKHLETARMKIGEMWIDLVNLRSETYAADSRIPTMTFGTPEQDALRRDFTMNALFYNITAGGVVEDLTGRGLQDLRDGLIRTPLPPRETFLDDPLRVLRAVRFGTRFGFRLHPDILEAAASEQVRVALATKISKERVGTELEGMFNGPA--PVEAVRLLQRLGLFTAVFALPTPL 390
BLAST of mRNA_E_fasciculatus_S2_contig949.17520.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XLF4_9CHLO) HSP 1 Score: 298 bits (763), Expect = 2.940e-86 Identity = 150/258 (58.14%), Postives = 191/258 (74.03%), Query Frame = 3
Query: 255 LKPNEADILAMLLEAVKHSKTGTVVRVAGGWVRDKLLGLENEDIDIALDNCTGVAFAEMVNAYLKSQGRDEGKVAVIEANPEQSKHLETARMKIMGVWVDLVNLRTEVYRSDSRIPEASLGTAEEDALRRDFTLNALFYNVNEGKVEDKTGRGVDDLRDGIIRTPLSPMITFRDDPLRVLRAVRFAARFGFALYEDLRAAARDSEIQAALGTKVSRERVGAELGGMITGKMAQPALALSLLQDLGLAAAVYA-PPEHL 1025
L E ++L L A +H+ +GTV+R AGGWVRDKLLG E++DID+A+DN G FAE+VN +LKSQG++ AVI++NP+QSKHLETARMKI +W+DLVNLR+E Y SDSRIP GT +DALRRDFT+N++FYN+N +VED TGRG DL+DGI+RTPL+P+ TF DDPLRV+RAVRFA RFGF L L AA +++ ALG K+S+ER+G EL GM G P A+ LL LGL +V+A PPE +
Sbjct: 18 LTQEELELLNTLRAAAEHANSGTVLRCAGGWVRDKLLGRESKDIDVAVDNMLGKDFAELVNQFLKSQGKESRNAAVIQSNPDQSKHLETARMKINDLWIDLVNLRSETYASDSRIPTMQFGTPVQDALRRDFTINSMFYNINTNEVEDLTGRGRSDLKDGILRTPLAPLETFLDDPLRVMRAVRFATRFGFELEMSLEEAASSEKVKEALGQKISKERIGTELEGMFNGPA--PVAAVRLLDQLGLFLSVFALPPEQV 273
BLAST of mRNA_E_fasciculatus_S2_contig949.17520.1 vs.
Match: Uncharacterized (protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D594_9CHLO) HSP 1 Score: 300 bits (768), Expect = 5.370e-86 Identity = 159/259 (61.39%), Postives = 189/259 (72.97%), Query Frame = 3
Query: 255 LKPNEADILAMLLEAVKHSKTGTVVRVAGGWVRDKLLGLENEDIDIALDNCTGVAFAEMVNAYLKSQGRDEGKVAVIEANPEQSKHLETARMKIMGVWVDLVNLRTEVYRSDSRIPEASLGTAEEDALRRDFTLNALFYNVNEGKV-EDKTGRGVDDLRDGIIRTPLSPMITFRDDPLRVLRAVRFAARFGFALYEDLRAAARDSEIQAALGTKVSRERVGAELGGMITGKMAQPALALSLLQDLGLAAAVYAPPEHLV 1028
L E DI LL AV+H+ T +R AGGWVRDKLLG ++DIDIALD+ G FAEMVN YLKSQG++ AVI++NP+QSKHLETARMKI +W+DLVNLR+E Y +DSRIP + GT E+DALRRDFT+NALFYN+ G V ED TGRG+ DLRDG+IRTPL P TF DDPLRVLRAVRF RFGF L+ D+ AA +++ AL TKVS+ERVG EL GM G P A+ LLQ LGL AV+A P L+
Sbjct: 138 LTQREQDIFDTLLAAVRHAGAATSLRCAGGWVRDKLLGRSSDDIDIALDDMLGKDFAEMVNDYLKSQGKEARHAAVIQSNPDQSKHLETARMKIGEMWIDLVNLRSETYAADSRIPTMTFGTPEQDALRRDFTMNALFYNITAGGVVEDLTGRGLQDLRDGLIRTPLPPRETFLDDPLRVLRAVRFGTRFGFRLHPDILEAAASEQVRVALATKVSKERVGTELEGMFNGPT--PVEAVRLLQRLGLFTAVFALPASLL 394
BLAST of mRNA_E_fasciculatus_S2_contig949.17520.1 vs.
Match: Hypothetical (protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WZL0_9CHLO) HSP 1 Score: 297 bits (761), Expect = 8.800e-86 Identity = 158/282 (56.03%), Postives = 197/282 (69.86%), Query Frame = 3
Query: 180 ALRPRNGRRGESAVG-GTLKMNIVSCLKPNEADILAMLLEAVKHSKTGTVVRVAGGWVRDKLLGLENEDIDIALDNCTGVAFAEMVNAYLKSQGRDEGKVAVIEANPEQSKHLETARMKIMGVWVDLVNLRTEVYRSDSRIPEASLGTAEEDALRRDFTLNALFYNVNEGKVEDKTGRGVDDLRDGIIRTPLSPMITFRDDPLRVLRAVRFAARFGFALYEDLRAAARDSEIQAALGTKVSRERVGAELGGMITGKMAQPALALSLLQDLGLAAAVYAPPEH 1022
A P G G S+ T++ N+V L E ++ LLEA +H+ TGTV+R AGGWVRDKLLG ++ DIDIALDN G FA+ VN +L S+GR+ AVI++NP+QSKHLETARMKI +W+DLVNLR+E Y DSRIP+ GT E+DA RRDFT+N+LFYN+N+G VED TGRG+ DLR G++RTPL P+ TF DDPLRVLRAVRF RFGF L L AAA +++ AL K+SRERVG EL GM G P ++ LL L L V+APP +
Sbjct: 68 AAAPSTGAAGSSSKKMSTVRDNVV--LNDTERELFNTLLEATQHAGTGTVLRCAGGWVRDKLLGKDSLDIDIALDNMLGKDFADKVNEFLLSKGREVRNAAVIQSNPDQSKHLETARMKINNIWIDLVNLRSETYAQDSRIPQMEFGTPEQDAYRRDFTINSLFYNINQGCVEDLTGRGLADLRAGLMRTPLPPLETFLDDPLRVLRAVRFGTRFGFELDAALTAAAASEQVRMALAQKISRERVGTELEGMFNGP--NPLASVKLLLQLSLFPVVFAPPAN 345
BLAST of mRNA_E_fasciculatus_S2_contig949.17520.1 vs.
Match: Uncharacterized (protein n=2 Tax=Triticeae TaxID=147389 RepID=A0A453K870_AEGTS) HSP 1 Score: 288 bits (736), Expect = 3.500e-85 Identity = 148/260 (56.92%), Postives = 186/260 (71.54%), Query Frame = 3
Query: 255 LKPNEADILAMLLEAVKHSKTGTVVRVAGGWVRDKLLGLENEDIDIALDNCTGVAFAEMVNAYLKSQGRDEGKVAVIEANPEQSKHLETARMKIMGVWVDLVNLRTEVYRSDSRIPEASLGTAEEDALRRDFTLNALFYNVNEGKVEDKTGRGVDDLRDGIIRTPLSPMITFRDDPLRVLRAVRFAARFGFALYEDLRAAARDSEIQAALGTKVSRERVGAELGGMITGKMAQPALALSLLQDLGLAAAVYAPPEHLVPP 1034
L E I A LL+ V+H GT +RVAGGWVRDKLLG + DIDIALDN TG F E VN Y K G ++ + VI+ NP+QSKHLETARM I G+W+D VNLR+E Y +SRIP +GTA+EDALRRD T+N+LF+N+N VED TGRG++DL+ G+I TPL TF DDPLRVLRA+RFAARF F L EDL+ AA D ++++ LG+K+SRER+G E+ M++ K P AL ++DLGL V+A PE L PP
Sbjct: 75 LTEEEERIFARLLDVVRHFGLGTQLRVAGGWVRDKLLGKGSADIDIALDNMTGQNFCERVNEYSKFMGEEQKGIGVIQCNPDQSKHLETARMLIYGIWIDFVNLRSEKYAENSRIPTVEIGTAKEDALRRDLTINSLFFNINTKSVEDLTGRGLEDLKKGLIDTPLPAKSTFLDDPLRVLRAIRFAARFSFTLAEDLKEAASDEKVKSELGSKISRERIGHEVDLMMSDK--HPVNALRYIRDLGLFYVVFAFPEKLEPP 332
BLAST of mRNA_E_fasciculatus_S2_contig949.17520.1 vs.
Match: PolyA_pol (domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NUI1_9CHLO) HSP 1 Score: 295 bits (754), Expect = 4.700e-85 Identity = 158/294 (53.74%), Postives = 199/294 (67.69%), Query Frame = 3
Query: 255 LKPNEADILAMLLEAVKHSKTGTVVRVAGGWVRDKLLGLENEDIDIALDNCTGVAFAEMVNAYLKSQGRDEGKVAVIEANPEQSKHLETARMKIMGVWVDLVNLRTEVYRSDSRIPEASLGTAEEDALRRDFTLNALFYNVNEGKVEDKTGRGVDDLRDGIIRTPLSPMITFRDDPLRVLRAVRFAARFGFALYEDLRAAARDSEIQAALGTKVSRERVGAELGGMITGKMAQPALALSLLQDLGLAAAVYAPPEHLVPPPPEGGLDWERG----AAVARAAARLLEFRSSVTE 1124
L E ++ ++LLEA H+ TGT +R AGGWVRDKLLGLE++DID+ALDN G FA+ VN YL+SQG++ K AVI +NPEQSKHLETARMK+ +W+DLVNLR+E Y SRIP+ GT +DA RRDFT+NALFYN+N G VED TG+G+ DLR G++RTPL TF DDPLRVLRAVRFA RFGF L+ ++ AA ++++ALG K+SRER+G EL GM G+ P LA+ LL L L V+A P P+ G +G A AA L S + E
Sbjct: 10 LTAEEQELFSLLLEAANHAGTGTTLRCAGGWVRDKLLGLESKDIDVALDNMLGREFADKVNDYLQSQGKETHKAAVIHSNPEQSKHLETARMKVNDLWIDLVNLRSETYAEGSRIPKMEFGTPLQDAERRDFTVNALFYNLNAGAVEDLTGKGLTDLRAGLLRTPLPASETFLDDPLRVLRAVRFATRFGFELHPEILEAAAGEKVRSALGGKISRERIGTELEGMFNGRA--PTLAVLLLDRLRLFPVVFAAP-------PQNGAQLGQGYGGPCGAAMAATEALLKASGMEE 294
BLAST of mRNA_E_fasciculatus_S2_contig949.17520.1 vs.
Match: tRNA (nucleotidyltransferase (CCA-adding enzyme) n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S377_9CHLO) HSP 1 Score: 293 bits (751), Expect = 7.830e-85 Identity = 159/281 (56.58%), Postives = 191/281 (67.97%), Query Frame = 3
Query: 255 LKPNEADILAMLLEAVKHSKTGTVVRVAGGWVRDKLLGLENEDIDIALDNCTGVAFAEMVNAYLKSQGRDEGKVAVIEANPEQSKHLETARMKIMGVWVDLVNLRTEVYRSDSRIPEASLGTAEEDALRRDFTLNALFYNVNEGKVEDKTGRGVDDLRDGIIRTPLSPMITFRDDPLRVLRAVRFAARFGFALYEDLRAAARDSEIQAALGTKVSRERVGAELGGMITGKMAQPALALSLLQDLGLAAAVYAPPEHLVPPPPEGGLDWERGAAVARAAARL 1097
L +E I L+ A + + T +R AGGWVRDKLLG ++DIDIALDN G FAE VN YL S+G++ V VI+ NP+QSKHLETARMK+ VW+DLVNLR+E Y SRIPE + GT E+DA RRDFT+NALFYN+N+G VED T RG+DDLRDGIIRTPL PM TF DDPLRVLRAVRFA+RFGF L +L AA +++ L KVSRERVG EL GM+ G P A +LQ L L AV+ PE + L + GAA A AR+
Sbjct: 56 LTVSEKQIFDTLIRATQKAGIDTTLRCAGGWVRDKLLGKSSDDIDIALDNLLGKEFAEKVNEYLSSEGKEIHTVGVIQCNPDQSKHLETARMKVCDVWLDLVNLRSETYADGSRIPEMTFGTPEQDAYRRDFTINALFYNINDGTVEDLTLRGLDDLRDGIIRTPLDPMETFTDDPLRVLRAVRFASRFGFELESELVKAASSQQVREELVAKVSRERVGTELDGMLNGP--NPLAAAQILQQLRLFPAVFLAPEAQ-----QAKLGPDYGAACVAAMARM 329
BLAST of mRNA_E_fasciculatus_S2_contig949.17520.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S954_9STRA) HSP 1 Score: 296 bits (758), Expect = 1.010e-84 Identity = 233/576 (40.45%), Postives = 297/576 (51.56%), Query Frame = 3
Query: 75 RPAYHQRMSCAKRQRTDSIGGNMAANRSREHMGPLALRPRNGRRGESAVGGTLKMNIVSC-------LKPNEAD--ILAMLLEAVKHSKTGTVVRVAGGWVRDKLLGLENEDIDIALDNCTGVAFAEMVNAYLKSQGR-DEGKVAVIEANPEQSKHLETARMKIMGVWVDLVNLRTEVYRSDSRIPEASLGTAEEDALRRDFTLNALFYNVNEGKVEDKTGRGVDDL-RDGIIRTPLSPMITFRDDPLRVLRAVRFAARFGFALYEDLRAAARDSEIQAALGTKVSRERVGAELGGMITGKMAQPALALSLLQDLGLAAAVYAPP------EHLVPPPPEGGLDWERGAAVARAAARLLEFR---SSVTEGGGDEVTGGAPPTVAAAVETVAPAEGPGAEAGLAAREGSSSAPSAGGAQPXXXXXXXGKEPANMTPRGGGEGRVSTGGKPGSSDRKKEAPTTLVRELFLCAALLPLAGMR--HKAKKGKLVSAAHSVVADSLKKLKSKEAKNVEDVLELSKTFRPLA-DAYVATTTSPGTSAVATKTFSRLSVGLAVRQAKELWPTCVDLCCAVEM 1733
RPA + AKRQR + G MA+ G A+ G G +A G M++V + P EA+ + A LL GTVVRVAGGWVRD+LL N+DID+A+DN TGV FA V YL++QG D KV+VI+ANP+QSKHLETA MKI G VD+V+LRTE Y SRIP S+GT ++DA RRDFT+NALF+NVNE VED TG+GV+DL R I+RTPL P TF DDPLR+LRA+RF+ RF L +DLRAAA D +I+ AL KVSRER+G EL GM++G A+ AL L +LGL V+ P VP P DW+R VA A LL SS TE G APA G G AG PA P G P R L AALLP A H KKG+ + +VVA+S+K K+K++ + + EL+ + + Y A S++ RL +GL +R+ K+LWP + L CA ++
Sbjct: 11 RPAAGDAANAAKRQRREGAG-LMAS-------GVSAV----GGEGAAAERGAAPMSLVGAGEGPQVAIAPTEAEEALFATLLAVADSIGKGTVVRVAGGWVRDRLLRRHNDDIDLAIDNMTGVEFANHVREYLQAQGSGDNVKVSVIKANPDQSKHLETATMKIAGFEVDIVHLRTETYTGASRIPVVSIGTPKQDADRRDFTVNALFFNVNERMVEDFTGQGVEDLLRRRILRTPLPPRDTFLDDPLRLLRAIRFSVRFRLRLADDLRAAATDPDIRDALEHKVSRERIGKELEGMLSGTGARFPAALRLFFELGLLDIVFDPSGGQNGAAGAVPLPTPASQDWQRVVRVAEWAGWLLADNPLFSSRTESPG-----------------TAPAAGAGGVAG---------------------------SPAAAVP-----------GSP--------------RVCLLAAALLPFAQRTKPHPRKKGRDIPMVEAVVAESIK-FKNKDSTDASTITELASALKDMTCKVYDAQALQKSLSSL------RLDIGLLLRRLKQLWPGALVLACARDL 498 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig949.17520.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig949.17520.1 >prot_E_fasciculatus_S2_contig949.17520.1 ID=prot_E_fasciculatus_S2_contig949.17520.1|Name=mRNA_E_fasciculatus_S2_contig949.17520.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=704bp MSCAKRQRTDSIGGNMAANRSREHMGPLALRPRNGRRGESAVGGTLKMNIback to top mRNA from alignment at E_fasciculatus_S2_contig949:2026..9366- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig949.17520.1 ID=mRNA_E_fasciculatus_S2_contig949.17520.1|Name=mRNA_E_fasciculatus_S2_contig949.17520.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7341bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig949:2026..9366- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig949:2026..9366- >mRNA_E_fasciculatus_S2_contig949.17520.1 ID=mRNA_E_fasciculatus_S2_contig949.17520.1|Name=mRNA_E_fasciculatus_S2_contig949.17520.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2112bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig949:2026..9366- (Ectocarpus fasciculatus EfasUO2)back to top |