mRNA_E_fasciculatus_S2_contig948.17512.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig948.17512.1
Unique NamemRNA_E_fasciculatus_S2_contig948.17512.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig948.17512.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM84_ECTSI)

HSP 1 Score: 682 bits (1761), Expect = 3.980e-217
Identity = 494/667 (74.06%), Postives = 501/667 (75.11%), Query Frame = 2
Query:    2 TALSERSSTLRRTYSSALSSVARLAPAAGVSRLAGRLAQLFREADPDFDKRQRRTLALLLGDLCRRAGGQLGAPGGKAATGGVKEEGTSXXXXXXXXXXFAASGWNQVLPVAFVASKDPDKPVADAFAEAWQEGLTQLQLGAAGQGEACRVRGAKDAVLLMLPAILAEVSRAISSVSRVTKRQGCSGLKDLASILGPSLGEESSGRRLIRRVLSQVPGRTWEGKEELLEAVVALCAAGKGSAITLEPFVWGGEGXXXXXXXXXXGVKRNXXXXXXXXXXXXXXXXXXXXXSSSGQLEESSSATAGAEGIVRGTDGAASSSSDGDNETTDGIPGGTDDGPAFEYKDKVGDLDKDAAGPAAAAPGGAVQAQREDDQPRKDAALEAGLASLDMEDDSPTPFGDVVTLMLSQLRRKDNKFGRAAASSLAALLDAFPECCVYDLVAPTLLDLAGLDGAAXXXXXXXXXXXXXXXKEDPIMQARAVACLAAAWPRVPAPXXXXXXXXXXXXXXXXXXXXXXXG-----------RTDAVCNVQRAHAASLTRALSGAILLKVWSVRVPIYGALSAIVSRTTTAAESRAPVLTGSLLADVVQAVELGADDAKYSQVRAAAISVVGAMTCRKELRLALMPHKEGLAAAARTAAQDPEPKVAVVGSKAAQNLSWWP 1969
            TALSERSSTLRRTYSSALSSVARLAPAAGVSRLA RLAQLFREADPDFDKRQRRTLALLLGDLCRRAGGQLGAPGGKAATGGVKEEG S          FAASGWNQVLPVAFVASKDPDKPVADAFAEAWQEGLTQLQLGAAGQGEACRVRGAKDAVLLM             + SR  KR                                    RT E +                           GE XXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXX                                  NE TDG PGGTDDGPAFEYKDKVGDLD+DAAGPAAAAPG AVQAQRED QPRKDAALEAGLASLDMEDDSPTPFGDVV LMLSQLRRKD KFGRAAASSLA LLDAFPECCVYDLVAPTLL+LAGLDGAA  XXXXXXXXXXX     PIMQARAVACLAAAWPRVPA XXXXXXXXXXXXXXXXXXXXXXX            R DAVCNVQRAHAASLTR LSGAILLKVWSVRVPIYGALSAIVSRTT AAESRAPVLTGSLLADVV+AVELGA+DAKYSQVRAAAISVVGAMTCRKELRLAL PHKEGLA AARTAA+DPEPKVAV GSKAAQNLSWWP
Sbjct: 1729 TALSERSSTLRRTYSSALSSVARLAPAAGVSRLASRLAQLFREADPDFDKRQRRTLALLLGDLCRRAGGQLGAPGGKAATGGVKEEGASGGGG------FAASGWNQVLPVAFVASKDPDKPVADAFAEAWQEGLTQLQLGAAGQGEACRVRGAKDAVLLM-------------ASSRGVKRN-----------------------------------RTSEHE---------------------------GEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------NEATDGTPGGTDDGPAFEYKDKVGDLDRDAAGPAAAAPGEAVQAQREDGQPRKDAALEAGLASLDMEDDSPTPFGDVVALMLSQLRRKDTKFGRAAASSLAVLLDAFPECCVYDLVAPTLLELAGLDGAAAGXXXXXXXXXXX-----PIMQARAVACLAAAWPRVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXARQADATTTRIDAVCNVQRAHAASLTRVLSGAILLKVWSVRVPIYGALSAIVSRTTAAAESRAPVLTGSLLADVVRAVELGAEDAKYSQVRAAAISVVGAMTCRKELRLALTPHKEGLAGAARTAAEDPEPKVAVEGSKAAQNLSWWP 2283          
BLAST of mRNA_E_fasciculatus_S2_contig948.17512.1 vs.
Match: Proteasome (stabiliser-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAR0_9STRA)

HSP 1 Score: 178 bits (451), Expect = 6.330e-42
Identity = 244/688 (35.47%), Postives = 309/688 (44.91%), Query Frame = 2
Query:    5 ALSERSSTLRRTYSSALSSVARLAPAAGVSRLAGRLAQLFREADPDFDKRQRRTLALLLGDLCRRAGGQLGAPGGKAATGGVKEEGTSXXXXXXXXXXFAASGWNQVLPVAFVASKDPDKPVADAFAEAWQEGLTQLQLGAAGQGEACR-------VRGAKDAVLLMLPAILAEVSRAISSVSRVTKRQGCSGLKDLASILGPSLGEESSGRRLIRRVLSQVPGRTWEGKEELLEAVVALCAAGKGSAITLEPFVWGGEGXXXXXXXXXXGVKRNXXXXXXXXXXXXXXXXXXXXXSSSGQLEE---SSSATAGAEGIVRGTDGAASSSSDGDNETTDGIPGGTDDGPAFEYKDKVGDLDKDAAGPAAAAPGGAVQAQREDDQPRKDAALEAGLASLDMEDDSPTP----FGDVVTLMLSQLRRKDNKFGRAAASSLAALLDAFPECCVYDLVAPTLLDLAGLDGAAXXXXXXXXXXXXXXXKED----------------PIMQARAVACLAAAWPRVPAPXXXXXXXXXXXXXXXXXXXXXXXGRTDAVCNVQRAHAASLTRALSGAILLKVWSVRVPIYGALSAIVSRTTTAA--ESRAPVLTGSLLADVVQAVEL--GADDAKYSQVRAAAISVVGAMTCRKELR---LALMPHKEGLAAAARTAAQDPEPKVAVVGSKAAQNL 1957
            ALSERS+ +R +Y+SAL++VARLAPA  V+ LA RL +LF  ++ D +  QR   A LL +L  RA           A GG   EG            +  SGW   LP+A+VA  D D  VA AFA  W EGLTQLQLGAAG             VRG   A  L+L  I AE+  A+   SR  + +  +         G  LGE+++G  ++  +L  VPGR WE KE LLEAVV +    +G    +E  + G EGXXXXXXXXXX     XXXXXXX               +    E    S +AT+G E                +    DG  GG+    A  Y+DK+GDL              A +A+  D              +   +  +P P    +G+VV L++ QL R+     RAAASS+AAL  AFPEC  +   APTLL  A L    XXXXXXXXXXXXXXX                   P+MQARAV  L AAWPR                           G                    + A+  +VWSVRV +   +  I+     AA  ++ A    G  L  V  AV    G  D KYS VR AA     A+          L+L+P KE L   AR AA D +  VA +G+KA Q L
Sbjct: 1840 ALSERSAAVRASYTSALAAVARLAPAPLVAPLARRLCRLFAASNEDLEGGQRAAAAALLRELAARA---------PEAMGGRGSEGE-----------WRRSGWAAALPLAYVARHDADAAVAAAFATVWDEGLTQLQLGAAGXXXXXXXXXXXXSVRGEAGACALLLAPIAAEIVGALGGTSRGGRLRAAAAXXXXXXXXGARLGEDAAGAEVLGALLRAVPGRAWERKEALLEAVVKVAVECRGG---MELSMRGAEGXXXXXXXXXXXXXXXXXXXXXXAELESDAPGAVNNGVADAPAEAGGGSGAATSGTEDXXXXXXXXXXXXXXXE----DGADGGS---AAAAYEDKLGDL--------------AAEAEPMDXXXXXXXXXXXXXGA--QQAAAPAPPRIAYGEVVGLLVRQLGRQSKLVRRAAASSVAALAPAFPECDTFAAAAPTLLRAALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVMQARAVEALTAAWPR---------------------------GAGGXXXXXXXXXXXXXXXXXAAALPTRVWSVRVQLLRLIKTILEAGFGAATADAAAAASCGRALPAVAPAVASAGGIGDLKYSAVRVAAAEAALALASVSPAGPGGLSLVPFKEALQDVARVAAADGDASVASLGAKAQQAL 2454          
BLAST of mRNA_E_fasciculatus_S2_contig948.17512.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRQ8_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 8.980e-11
Identity = 171/687 (24.89%), Postives = 253/687 (36.83%), Query Frame = 2
Query:    5 ALSERSSTLRRTYSSALSSVARLAPAAG-VSRLAGRLAQLFRE-ADPDFDKRQRRTLALLLGDLCRRAGGQLGAPGGKAATGGVKEEGTSXXXXXXXXXXFAASGWNQVLPVAFVASKDPDK----PVADAFAEAWQEGLTQLQLGAAGQGEACRVRGAKDAVLLMLPAILAEVSRAISSVSRVTKRQGCSGLKDLASILGPSLGEESSGRRLIRRVLSQVPGRTWEGKEELLEAVVALCAAGKGSAITLEPFVWGGEGXXXXXXXXXXGVKRNXXXXXXXXXXXXXXXXXXXXXSSSGQLEESSSATAGAEGIVRGTDGAASSSSDGDNETTDGIPGGTDDGPAFEYKDKVGDLDKDAAGPAAAAPGGAVQAQREDDQPRKDAALEAGLASLDMEDDS--PTPFGDVVTLMLSQLRRKDNKFGRAAASSLAALLDAFPECCVYDLVAPTLLDLAG-LD---GAAXXXXXXXXXXXXXXXKEDPIMQARAVACLAAAWPRVPAPXXXXXXXXXXXXXXXXXXXXXXXGRTDAVCNVQRAHAASLTRALSGAIL---LKVWSVRVPIYGALSAIVSRTTTAAESR--------------------APV---LTGSLLADVVQAVELGADDAKYSQVRAAAISVVGAMTCRKELRL--ALMPHKEGLAAAARTAAQDPEPKVAVVGSKA 1945
            AL+ERSST +R + SAL+ VA+LAP    V R   RL + +R  AD    + QR  + L L  LC  AG  L             EE                + W  VLP+A+V   + ++     V  A+ E W EG   L     G+G     +   D        +  EV R + S S   +R     L  L+  LG   G     RRL+  +L  +PGR WEGK+E+L A+V +  A       L     G EG          G K                       ++ G+ EE+         +VR          D +++  +              K+    L + AA    AA G           PR +          D  DD      +  ++ ++  Q RR    + RAA  ++  L  AFP   V + V  TL+ +AG L+   G                 + D +++A AV  L A +P  P+P                       G     C        SL   L   +      VWS+R  ++ AL  ++ R     ++                     AP+   LTGS++  V+ A   G  DAKY QVR  AI V+ A+  R E+ +  +LMPH + + +A      D  P+V  +  +A
Sbjct: 1608 ALTERSSTAQRFFLSALAGVAKLAPGGEEVRRAILRLLREYRRVADLATHRSQRLPVVLALRQLCTAAGEGL-------------EE----------------AAWAAVLPLAYVGRFEEEEGGEGEVRKAWEEIWMEGCAAL-----GKGGGNTTKALGDE-------LCTEVERELRSSSWSGRRAALKALASLSEGLGRG-GLRLHARRLVGELLDLLPGRLWEGKDEVLRALVKVVVAW-----LLRVAEEGEEG----------GRKEEGGDDVWEGLAVGVTPAAEASEAAEGRDEEAFGR------LVR---------EDAEDQAIN--------------KEGKASLVQGAALSEIAASGCLASLS-----PRGEDLAAPAATGQDPTDDGLHSLSYRGLIRVLTDQCRRPHRDYRRAAVQAIMELASAFPSLDVLESVRETLVLMAGGLEASVGVESCNYNKETVAGRAGSEVDHVLRAWAVEALGACFP--PSPPMLVQ------------------GDQATSCPAYLTQKESLPWLLPMLLSRSSFSVWSLRRAVHKALKRVMERVYVRPDANSASFPKDSGSCNQVQPSADLAPLPSLLTGSVVDRVISAAIQGVGDAKYHQVREVAIDVLLALIKRPEMEVHVSLMPHSDRIMSALEKVVHDQNPEVVRLAMEA 2183          
BLAST of mRNA_E_fasciculatus_S2_contig948.17512.1 vs.
Match: Proteasome-associated (protein ecm29 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TC24_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.500e-8
Identity = 77/242 (31.82%), Postives = 106/242 (43.80%), Query Frame = 2
Query:    5 ALSERSSTLRRTYSSALSSVARLAPAAG-VSRLAGRLAQLFRE-ADPDFDKRQRRTLALLLGDLCRRAGGQLGAPGGKAATGGVKEEGTSXXXXXXXXXXFAASGWNQVLPVAFVASKDPDK----PVADAFAEAWQEGLTQLQLGAAGQGEACRVRGAKDAVLLMLPAILAEVSRAISSVSRVTKRQGCSGLKDLASILGPSLGEESSGRRLIRRVLSQVPGRTWEGKEELLEAVVALCAA 712
            AL+ERSST +R + SAL+ VA+LAP    V R   RL + +R  AD    + QR  + L L  LC  AG  L             EE                + W  VLP+A+V   + ++     V  A+ E W EG   L     G+G     +   D        +  EV R + S S   +R     L  L+  LG   G     RRL+  +L  +PGR WEGK+E+L A+V +  A
Sbjct:  597 ALAERSSTAQRFFLSALAGVAKLAPGGEEVRRAILRLLREYRRVADLATHRSQRLPVVLALRQLCTAAGEGL-------------EE----------------AAWAAVLPLAYVGRFEEEEGGEGEVRKAWQEIWMEGCAAL-----GKGGGNTTKALGDE-------LCTEVERELRSSSWSGRRAALKALASLSEGLGRG-GLRLHARRLVGELLDLLPGRLWEGKDEVLRALVKVVVA 796          
BLAST of mRNA_E_fasciculatus_S2_contig948.17512.1 vs.
Match: proteasome (adapter and scaffold protein ECM29 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8EF16)

HSP 1 Score: 66.6 bits (161), Expect = 2.270e-7
Identity = 41/130 (31.54%), Postives = 69/130 (53.08%), Query Frame = 2
Query:  323 VLPVAFVASKDPDKPVADAFAEAWQEGLTQLQLGAAGQGEACRVRGAKDAVLLMLPAILAEVSRAISSVSRVTKRQGCSGLKDLASILGPSLGEESSGRRLIRRVLSQVPGRTWEGKEELLEAVVALCAA 712
            V+PV F++  + DK V+  + E W+E +T  +L                 + L +  I+  ++  I+S S  +KR+    +  L  +LG S+   S  R L+  V+++VPGR WEGKE+LLE + +LC +
Sbjct: 1440 VVPVIFLSRFEDDKNVSSLYEELWEENMTSERL----------------TLQLYIGEIVTLITEGIASSSWGSKRKAAKAIVKLCEVLGESVS--SYHRVLLTSVMTEVPGRIWEGKEDLLEGLSSLCTS 1551          
BLAST of mRNA_E_fasciculatus_S2_contig948.17512.1 vs.
Match: Uncharacterized (protein n=1 Tax=Oryza nivara TaxID=4536 RepID=A0A0E0IY04_ORYNI)

HSP 1 Score: 63.5 bits (153), Expect = 1.260e-6
Identity = 41/136 (30.15%), Postives = 70/136 (51.47%), Query Frame = 2
Query:  308 SGWNQV-LPVAFVASKDPDKPVADAFAEAWQEGLTQLQLGAAGQGEACRVRGAKDAVLLMLPAILAEVSRAISSVSRVTKRQGCSGLKDLASILGPSLGEESSGRRLIRRVLSQVPGRTWEGKEELLEAVVALCAA 712
            SG+N V LPV F +  D DK +   + E W++  +  ++                 + L LP I++ +  ++SS S   KR+    +K L   LG SL    +   ++  +L ++PGR WEGK+ +L+A+ ALC++
Sbjct:  177 SGYNAVVLPVIFASRFDDDKDIGALYGELWEDIPSSERV----------------TLQLYLPEIISLLCDSMSSSSWAGKRKSAKAIKKLCDALGESLSVHHNN--ILESLLKELPGRFWEGKDAILDALAALCSS 294          
BLAST of mRNA_E_fasciculatus_S2_contig948.17512.1 vs.
Match: Uncharacterized (protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WHT8_ZIZPA)

HSP 1 Score: 63.2 bits (152), Expect = 1.460e-6
Identity = 44/145 (30.34%), Postives = 76/145 (52.41%), Query Frame = 2
Query:  308 SGWNQ-VLPVAFVASKDPDKPVADAFAEAWQEGLTQLQLGAAGQGEACRVRGAKDAVLLMLPAILAEVSRAISSVSRVTKRQGCSGLKDLASILGPSLGEESSGRRLIRRVLSQVPGRTWEGKEELLEAVVALCAAGKGSAITLE 739
            SG+N  VLPV F +  D DK ++  + E W++  +  ++                 + L LP I++ +   +SS S   KR+    +K L   LG SL    +   +++ +L ++PGR WEGK+ +L+A+ +LC++   +AIT E
Sbjct:  109 SGYNTCVLPVIFASRFDDDKDISALYGELWEDIPSSERV----------------TLQLYLPEIVSLLCDCMSSSSWAGKRKSAKAIKKLCDSLGESLSVHQNN--ILKSLLKELPGRFWEGKDAILDALASLCSSCH-AAITAE 234          
BLAST of mRNA_E_fasciculatus_S2_contig948.17512.1 vs.
Match: Uncharacterized (protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WFL1_ZIZPA)

HSP 1 Score: 63.2 bits (152), Expect = 1.460e-6
Identity = 44/145 (30.34%), Postives = 76/145 (52.41%), Query Frame = 2
Query:  308 SGWNQ-VLPVAFVASKDPDKPVADAFAEAWQEGLTQLQLGAAGQGEACRVRGAKDAVLLMLPAILAEVSRAISSVSRVTKRQGCSGLKDLASILGPSLGEESSGRRLIRRVLSQVPGRTWEGKEELLEAVVALCAAGKGSAITLE 739
            SG+N  VLPV F +  D DK ++  + E W++  +  ++                 + L LP I++ +   +SS S   KR+    +K L   LG SL    +   +++ +L ++PGR WEGK+ +L+A+ +LC++   +AIT E
Sbjct:  109 SGYNTCVLPVIFASRFDDDKDISALYGELWEDIPSSERV----------------TLQLYLPEIVSLLCDCMSSSSWAGKRKSAKAIKKLCDSLGESLSVHQNN--ILKSLLKELPGRFWEGKDAILDALASLCSSCH-AAITAE 234          
BLAST of mRNA_E_fasciculatus_S2_contig948.17512.1 vs.
Match: Uncharacterized (protein n=5 Tax=Asteraceae TaxID=4210 RepID=A0A2J6JHI8_LACSA)

HSP 1 Score: 63.9 bits (154), Expect = 1.520e-6
Identity = 39/130 (30.00%), Postives = 70/130 (53.85%), Query Frame = 2
Query:  323 VLPVAFVASKDPDKPVADAFAEAWQEGLTQLQLGAAGQGEACRVRGAKDAVLLMLPAILAEVSRAISSVSRVTKRQGCSGLKDLASILGPSLGEESSGRRLIRRVLSQVPGRTWEGKEELLEAVVALCAA 712
            V+PV F++  + DK V+  + E W+E +T  +L                 + L +  I+  +++ I+S S  +KR+    +  L  +L  SL   S  + L+  +++++PGR WEGKE+LLEA+ +LC +
Sbjct: 1444 VVPVIFLSRFEDDKNVSSLYEELWEENMTSERL----------------TLQLYVSEIVTLITQGIASSSWASKRKAAKAIVKLCEVLDESLF--SYHQVLLTSLMNEIPGRIWEGKEDLLEALSSLCTS 1555          
BLAST of mRNA_E_fasciculatus_S2_contig948.17512.1 vs.
Match: proteasome-associated (protein ECM29 homolog isoform X1 n=35 Tax=Gossypium TaxID=3633 RepID=A0A1U8I0J6_GOSHI)

HSP 1 Score: 63.9 bits (154), Expect = 1.520e-6
Identity = 46/145 (31.72%), Postives = 76/145 (52.41%), Query Frame = 2
Query:  308 SGWNQVL-PVAFVASKDPDKPVADAFAEAWQEGLTQLQLGAAGQGEACRVRGAKDAVLLMLPAILAEVSRAISSVSRVTKRQGCSGLKDLASILGPSLGEESSGRRLIRRVLSQVPGRTWEGKEELLEAVVALCAAGKGSAITLE 739
            SG+N V+ PV F +  + DK V+  F E W+E  +                G +  + L +  I++ +  +I+S S  +KR+    +  L+ +LG SL   SS   L+  ++ ++PGR WEGKE LL+A+ AL  +    AI++E
Sbjct: 1442 SGYNTVIIPVIFTSRFEDDKHVSGLFEELWEESTS----------------GDRITLQLYMGEIVSLICDSIASSSWASKRKSAKAICKLSEVLGDSL---SSYHVLLTSLMKEIPGRLWEGKETLLDAISALSVSNH-KAISME 1566          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig948.17512.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized3.980e-21774.06protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM84... [more]
Proteasome6.330e-4235.47stabiliser-domain-containing protein n=1 Tax=Tribo... [more]
Uncharacterized8.980e-1124.89protein n=1 Tax=Nannochloropsis salina CCMP1776 Ta... [more]
Proteasome-associated3.500e-831.82protein ecm29 n=1 Tax=Nannochloropsis gaditana Tax... [more]
proteasome2.270e-731.54adapter and scaffold protein ECM29 n=1 Tax=Erigero... [more]
Uncharacterized1.260e-630.15protein n=1 Tax=Oryza nivara TaxID=4536 RepID=A0A0... [more]
Uncharacterized1.460e-630.34protein n=1 Tax=Zizania palustris TaxID=103762 Rep... [more]
Uncharacterized1.460e-630.34protein n=1 Tax=Zizania palustris TaxID=103762 Rep... [more]
Uncharacterized1.520e-630.00protein n=5 Tax=Asteraceae TaxID=4210 RepID=A0A2J6... [more]
proteasome-associated1.520e-631.72protein ECM29 homolog isoform X1 n=35 Tax=Gossypiu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig948contigE_fasciculatus_S2_contig948:4411..8645 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score480.3
Seed ortholog evalue1.1e-132
Seed eggNOG ortholog2880.D8LM84
Model size2617
KEGG koko:K11886
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.proteasome assembly
EggNOG OGsKOG0915@1,KOG0915@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-01_005705.1
Cds size1491
COG Functional cat.DTZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03051
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig948.17512.1prot_E_fasciculatus_S2_contig948.17512.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig948 5056..8164 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842596.0306346-UTR-E_fasciculatus_S2_contig948:4410..50551696842596.0306346-UTR-E_fasciculatus_S2_contig948:4410..5055Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig948 4411..5055 -
1696842596.0905216-UTR-E_fasciculatus_S2_contig948:8164..86451696842596.0905216-UTR-E_fasciculatus_S2_contig948:8164..8645Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig948 8165..8645 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842596.0462134-CDS-E_fasciculatus_S2_contig948:5055..52351696842596.0462134-CDS-E_fasciculatus_S2_contig948:5055..5235Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig948 5056..5235 -
1696842596.057672-CDS-E_fasciculatus_S2_contig948:5849..64081696842596.057672-CDS-E_fasciculatus_S2_contig948:5849..6408Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig948 5850..6408 -
1696842596.0683331-CDS-E_fasciculatus_S2_contig948:6765..75141696842596.0683331-CDS-E_fasciculatus_S2_contig948:6765..7514Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig948 6766..7514 -
1696842596.0793579-CDS-E_fasciculatus_S2_contig948:8161..81641696842596.0793579-CDS-E_fasciculatus_S2_contig948:8161..8164Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig948 8162..8164 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig948.17512.1

>prot_E_fasciculatus_S2_contig948.17512.1 ID=prot_E_fasciculatus_S2_contig948.17512.1|Name=mRNA_E_fasciculatus_S2_contig948.17512.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=497bp
MLPAILAEVSRAISSVSRVTKRQGCSGLKDLASILGPSLGEESSGRRLIR
RVLSQVPGRTWEGKEELLEAVVALCAAGKGSAITLEPFVWGGEGGGGGGE
ASSRGVKRNRTSELEDEEEHDGEAVAATAQSSSGQLEESSSATAGAEGIV
RGTDGAASSSSDGDNETTDGIPGGTDDGPAFEYKDKVGDLDKDAAGPAAA
APGGAVQAQREDDQPRKDAALEAGLASLDMEDDSPTPFGDVVTLMLSQLR
RKDNKFGRAAASSLAALLDAFPECCVYDLVAPTLLDLAGLDGAAAAAAAA
AAGTTSGGGKEDPIMQARAVACLAAAWPRVPAPPASPSAPAPDAGAAAAA
AAAAAAGRTDAVCNVQRAHAASLTRALSGAILLKVWSVRVPIYGALSAIV
SRTTTAAESRAPVLTGSLLADVVQAVELGADDAKYSQVRAAAISVVGAMT
CRKELRLALMPHKEGLAAAARTAAQDPEPKVAVVGSKAAQNLSWWP*
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mRNA from alignment at E_fasciculatus_S2_contig948:4411..8645-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig948.17512.1 ID=mRNA_E_fasciculatus_S2_contig948.17512.1|Name=mRNA_E_fasciculatus_S2_contig948.17512.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4235bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig948:4411..8645- (Ectocarpus fasciculatus EfasUO2)
CACCGCCCTCTCGGAGCGCAGCTCCACCCTCCGCCGGACGTACTCGTCGG CCCTGTCCTCGGTGGCGAGGCTCGCGCCGGCGGCGGGGGTGTCCCGCCTG GCCGGCCGCCTCGCCCAGCTCTTCAGAGAGGCCGACCCGGACTTCGACAA GCGCCAGAGGCGGACCCTGGCCCTCCTACTGGGCGACCTGTGTCGCAGGG CCGGCGGCCAGCTCGGAGCACCCGGCGGCAAGGCGGCGACCGGCGGAGTC AAGGAAGAGGGTACTTCGGGCGGGAGCGGGGACGGTGGCGGCGGCGGCTT CGCCGCCAGCGGGTGGAACCAGGTCCTGCCCGTGGCGTTCGTGGCGAGCA AGGACCCCGACAAGCCGGTCGCTGACGCGTTCGCGGAGGCGTGGCAGGAG GGGCTCACGCAGCTGCAGCTCGGGGCGGCCGGGCAGGGCGAGGCCTGCAG AGTCCGCGGCGCCAAGGATGCCGTGTTGCTGATGGTGAGCTTACAGGCGG ATAGGAAAAACAGGGGGCCGCCTTTCAATCGTGCTTTAAATGCAACGTGT TTTTTACCACCGTACAGACTGGAGCGTGGGGACGGGGATGGTAGGAGGGT GAGGTCGTCGGCGGTGTTTTTGAAGTCTAGCTGTCCGGGCATGTTCCTAG TCTAGATGTTGTACACCAGCGGAGCGTACCCTCCACGCTGCTGGCTCGCC GTCTCGTCCACTCCTACGTCAGTCGTCCACAAACTTATTCGACAAAGCGG ACGCTCCGCACCTGTGGCTGCGTCTCAGCATTTTATATGTACCCCTCTGT TGCGTTTGGTATGTTGACTCGCTCTTGACTTACACAGATCTTCCTTCGGA CGTGCGAACCCAGCTGTTGAGACAGTGCGCCCACACAGTCCTAAAAAAAG GTGGACAGGCACAGCTCCATATGCATACCTGTGGTACGCGAGTGCTGTGC ATCCTTCTCTATATATCTGCAGCACGCGACACACTCTCGTTCTTTTCAGA GCTCAGCGCGAAGAAACGTCGCCGCTGCAAACTTAGGAAAACTATGCTCT CCCGAAACAACGTTATTAAAAACCGCAGCGTCAAATCGATTCGTGCCACC CCCCCCCGGATGTTCCTAATGTTTTCTCCAGCTGCCCGCCATCCTGGCCG AAGTATCCCGGGCGATCTCCTCCGTGAGCCGAGTGACCAAGCGGCAGGGG TGCTCGGGGCTCAAGGACCTCGCCTCCATCCTCGGACCTTCGCTAGGGGA AGAGAGCTCCGGCCGCCGCCTGATCCGGCGCGTGCTGTCGCAGGTCCCCG GGCGCACGTGGGAGGGCAAGGAGGAGCTCCTGGAGGCGGTGGTGGCGCTG TGCGCCGCCGGCAAGGGCTCCGCCATCACGCTCGAGCCGTTCGTGTGGGG CGGAGAGGGCGGCGGCGGCGGCGGCGAGGCTTCTTCTCGGGGAGTGAAGC GTAACAGAACCAGCGAGCTCGAAGACGAAGAGGAGCACGACGGCGAGGCG GTGGCGGCGACGGCGCAGTCTTCTAGCGGACAGCTGGAGGAGAGTTCTAG CGCGACGGCGGGGGCGGAAGGCATTGTCCGGGGTACCGATGGCGCGGCCT CTTCTTCCTCAGACGGCGACAACGAGACGACGGATGGAATCCCGGGAGGG ACAGACGACGGTCCCGCTTTCGAGTACAAGGATAAGGTCGGCGATCTCGA CAAAGACGCGGCGGGACCAGCGGCGGCCGCGCCAGGAGGGGCGGTCCAGG CCCAGAGAGAAGACGATCAGCCGAGGAAGGACGCCGCGCTGGAGGCGGGG CTGGCATCGCTGGACATGGAGGACGATTCGCCGACCCCTTTCGGGGATGT TGTGACGTTGATGCTGTCCCAGCTGCGGCGGTAAGGGTCTACATGCTATG TTGTTGTGTTGTGTACCCAGCGTGAGGTCTGAGAGCGTACATGAATCATG CAGCAAAGGAAGACCAAGATGTTCGTTGATCGTGTCGATGATGATGCATT TTTTTTTTTGTCCCTATTCTCCAACGGGGCACCTGTTGTCGTTTGGCCTA CTGACACCCCGCCGCATCTAGTCTCAAAGAAGGCAGCAAACCCGTTCCTG CACCCCGAATAAAAAATCCGTAGCAAAGTGTGTCCACGTCAACTTTATTT GTGTATCATCTCCGAATTAGAAATGTGTGTTCACACACAGGCGCCTTTGT TATAACATCTCCGTACCGTCAATAAACGCCACACCAGGAAGGACAACAAG TTCGGTCGAGCCGCGGCGTCGTCCCTGGCGGCGCTCCTCGACGCCTTCCC GGAGTGCTGCGTGTACGACCTGGTAGCGCCCACCCTCCTCGACCTGGCCG GGCTGGACGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGACCACC TCCGGCGGTGGCAAGGAAGACCCAATCATGCAGGCTCGCGCGGTGGCCTG CCTCGCGGCTGCTTGGCCTCGCGTTCCGGCGCCGCCTGCGTCGCCGAGCG CACCAGCCCCGGACGCTGGGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCC GCCGGTAGAACCGATGCCGTCTGCAATGTCCAACGCGCGCACGCGGCGTC CTTGACCAGGGCCCTGTCCGGGGCCATCCTGCTCAAGGTCTGGAGCGTCA GGGTCCCGATCTACGGCGCCTTGTCGGCTATCGTCAGCAGGACGACCACA GCCGCAGAGTCTCGCGCTCCCGTGCTGACCGGTTCGCTCCTGGCAGACGT CGTCCAGGCCGTTGAGCTTGGGGCCGACGATGCGAAGTACTCTCAGGTGT GTGTGTGTGTGTGTGTTAATGGTTTTTTAAAGATCGACCGCGCAAATCGG CTGCCCGATGACAGGACGTCAGTCATGTATGCATGCTGTGTGTGTTTTTT TTCTCTCGCTTATACTCTCGACGGATGTGGTAGCGAGCAATGCATAAGTG AGCTCGAGAGCTTCTGTACGTACTGCGGTCGTTGTGCCAGAAATCGCGTG TCGAGTGCGATGGATGTAGGGGGGGAATCCTAGGCTCTACATCCCCCCCC TTGTCGAAGGCGTTGTTTTCAAGGTGGTGGTCCAAGTAGATGATTTGAAA AGGGCCGTCACCATTTGTTCCAAGTTGAACTCCGATTCGGCCCTTTGGTA GGTGACACCACCACTCTTGCTGTGACAGCTTAGGGCACTTCCGATTTCCT CCCGATGTGTTGCGCTCGTTTGATGCACGACGGGCCACCTACGTTGGATT TGCCCGCTTCCTGCACTCCCTCTTCGGTTTACCAACCACACACACTCTCT CCCACTCCCACACACGAACTCATCCCCTGGAATACACACACCACCTCCTG TCTCGAATGAAAAAAAACACAAGAAACAAACGTGGTCCGGTTTCCGGAAA ACATTTCCAGGTACGGGCGGCGGCCATTTCTGTCGTGGGGGCTATGACGT GCCGCAAGGAGCTGAGGCTCGCGCTCATGCCTCACAAGGAGGGGCTCGCA GCAGCGGCAAGAACTGCGGCTCAAGACCCTGAGCCGAAGGTGGCGGTGGT GGGCAGCAAAGCGGCGCAGAACCTGTCCTGGTGGCCTTAGCGGTGGAACT AGCTATTAAGAGTAGGGCTTGAAAAAATCAAGCTGCCAAACGCTGGCTGT ACTTTGTTTTTGGTGTTAAGTGTATTCTTGTACCCTTGTGTGTTCGTTCG TTGTAGCTTTAAAGCTAATCGTCCGCGTGTGCGATGGGTACCTAAGGATG TTTCGTCTCTCCCCAGGTCGAGCTTGGTTTAGTTTGATGTGTCTAAGGGG AAGTGACGTGGCAGGGGGTGTATCGTAGAACTGCCCGTTACAGAGTTTAC GGTTCCCATCAAGGATTCACACGTCCCTTAGGCCGCTCTGGCAGCAGATG TTGTACGCTCAGTGAATGACGCCCATTCGTGGCGACCCCCAACCTTTGAG AGCATTGCACGTTCTTTGAGAAGACATGTTGATGGGCTTTGTTTGGTCCC GAGGATTTCGCGACCGGTGTGGGTGCTTACGTCCTCAACATGTAGGCTGC ACAGCAAGAACCGGAACCAACGCTGGGCTCTAACAGCCAATTTTAAGCGC TCAAGGCTCAGTTTCAAGTCCAAAAGGGCGGACGTTTCAATGACTCGGGC ATGTGGCACCACACCTACCTGGGTACTGAAGGTGGACAACAGCTGCGGCA GCTGCTGCTGCTGCACACGACGAGTTTAGCCTGGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig948:4411..8645-

>mRNA_E_fasciculatus_S2_contig948.17512.1 ID=mRNA_E_fasciculatus_S2_contig948.17512.1|Name=mRNA_E_fasciculatus_S2_contig948.17512.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1491bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig948:4411..8645- (Ectocarpus fasciculatus EfasUO2)
ATGCTGCCCGCCATCCTGGCCGAAGTATCCCGGGCGATCTCCTCCGTGAG
CCGAGTGACCAAGCGGCAGGGGTGCTCGGGGCTCAAGGACCTCGCCTCCA
TCCTCGGACCTTCGCTAGGGGAAGAGAGCTCCGGCCGCCGCCTGATCCGG
CGCGTGCTGTCGCAGGTCCCCGGGCGCACGTGGGAGGGCAAGGAGGAGCT
CCTGGAGGCGGTGGTGGCGCTGTGCGCCGCCGGCAAGGGCTCCGCCATCA
CGCTCGAGCCGTTCGTGTGGGGCGGAGAGGGCGGCGGCGGCGGCGGCGAG
GCTTCTTCTCGGGGAGTGAAGCGTAACAGAACCAGCGAGCTCGAAGACGA
AGAGGAGCACGACGGCGAGGCGGTGGCGGCGACGGCGCAGTCTTCTAGCG
GACAGCTGGAGGAGAGTTCTAGCGCGACGGCGGGGGCGGAAGGCATTGTC
CGGGGTACCGATGGCGCGGCCTCTTCTTCCTCAGACGGCGACAACGAGAC
GACGGATGGAATCCCGGGAGGGACAGACGACGGTCCCGCTTTCGAGTACA
AGGATAAGGTCGGCGATCTCGACAAAGACGCGGCGGGACCAGCGGCGGCC
GCGCCAGGAGGGGCGGTCCAGGCCCAGAGAGAAGACGATCAGCCGAGGAA
GGACGCCGCGCTGGAGGCGGGGCTGGCATCGCTGGACATGGAGGACGATT
CGCCGACCCCTTTCGGGGATGTTGTGACGTTGATGCTGTCCCAGCTGCGG
CGGAAGGACAACAAGTTCGGTCGAGCCGCGGCGTCGTCCCTGGCGGCGCT
CCTCGACGCCTTCCCGGAGTGCTGCGTGTACGACCTGGTAGCGCCCACCC
TCCTCGACCTGGCCGGGCTGGACGGGGCGGCGGCGGCGGCGGCGGCGGCG
GCGGCGGGGACCACCTCCGGCGGTGGCAAGGAAGACCCAATCATGCAGGC
TCGCGCGGTGGCCTGCCTCGCGGCTGCTTGGCCTCGCGTTCCGGCGCCGC
CTGCGTCGCCGAGCGCACCAGCCCCGGACGCTGGGGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCCGCCGGTAGAACCGATGCCGTCTGCAATGTCCAACG
CGCGCACGCGGCGTCCTTGACCAGGGCCCTGTCCGGGGCCATCCTGCTCA
AGGTCTGGAGCGTCAGGGTCCCGATCTACGGCGCCTTGTCGGCTATCGTC
AGCAGGACGACCACAGCCGCAGAGTCTCGCGCTCCCGTGCTGACCGGTTC
GCTCCTGGCAGACGTCGTCCAGGCCGTTGAGCTTGGGGCCGACGATGCGA
AGTACTCTCAGGTACGGGCGGCGGCCATTTCTGTCGTGGGGGCTATGACG
TGCCGCAAGGAGCTGAGGCTCGCGCTCATGCCTCACAAGGAGGGGCTCGC
AGCAGCGGCAAGAACTGCGGCTCAAGACCCTGAGCCGAAGGTGGCGGTGG
TGGGCAGCAAAGCGGCGCAGAACCTGTCCTGGTGGCCTTAG
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