mRNA_E_fasciculatus_S2_contig9466.17499.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9466.17499.1
Unique NamemRNA_E_fasciculatus_S2_contig9466.17499.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9466.17499.1 vs.
Match: tRNA-5-taurinomethyluridine (2-sulfurtransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTT0_ECTSI)

HSP 1 Score: 666 bits (1718), Expect = 4.940e-237
Identity = 331/383 (86.42%), Postives = 347/383 (90.60%), Query Frame = 1
Query:    1 WNQVFEPSLQEFARCRTPNMDVACNRFIKFDAFREHALGRMSADFVATGHYARTAPGPDGDWSRPVLRQAQDGNKDQTYFLSGVPSEGLAKVLFPLGGLTKPEVRRLAEEAGLPVARKRESMGVCFVGKRRSWASFISQYLTPSPGNFVCVDTGEVVGRHGGVQLYTVGQKSHLDGMPEKYYVAGLDSDTNSVFVARGAENLSLFARGLSVLASEFSWVAGDPPSELLSCSGIHPSVRVRREATTV----AGIEAPAPTKKLPPAASGEEPIDAGDIEGPPPILRCEYRSRHRQALLPCDVELLGGGGSGASVPRPVVHVHFDEPAKAIAPGQVLALYKEGVCLGGGPILRAEGHCSPALFRSTPPPSPQLGVKSSKPVATKS 1137
            WN+VFEPSLQE  RCRTPNMDVACNRFIKFDAFREHALGRMSADFVATGHYARTAPGP GDWSRPVLRQA+DGNKDQTYFLSGVPSEGLAKVLFPLGGLTKPEVRRLAEE GLPVARKRESMGVCFVGKRRSWASFISQYLTPSPGNFVCVDTGEVVGRHGGVQLYTVGQKSHLDGMPEKYYVAGLDSD+NSV+VARGA+N SLFARGLSVLAS+FSWVAG PP ELLS SG HPS   RREAT      AG+EAP PTK+  PAA G EPIDAG++EGPPP+LRCEYRSRHRQALLPC VELLGGGGSGASVPRPVVHV FDEPAKAIAPGQV+ALYKEG+CLGGGPILRAEG+CSPAL RS  PPS       S+P ATK+
Sbjct:  111 WNEVFEPSLQELDRCRTPNMDVACNRFIKFDAFREHALGRMSADFVATGHYARTAPGPGGDWSRPVLRQAEDGNKDQTYFLSGVPSEGLAKVLFPLGGLTKPEVRRLAEEGGLPVARKRESMGVCFVGKRRSWASFISQYLTPSPGNFVCVDTGEVVGRHGGVQLYTVGQKSHLDGMPEKYYVAGLDSDSNSVYVARGADNPSLFARGLSVLASKFSWVAGCPPPELLSGSGSHPSAPSRREATKAGGGPAGVEAPVPTKERQPAAPGGEPIDAGEMEGPPPVLRCEYRSRHRQALLPCGVELLGGGGSGASVPRPVVHVRFDEPAKAIAPGQVVALYKEGICLGGGPILRAEGNCSPALVRSMRPPS-------SRPAATKN 486          
BLAST of mRNA_E_fasciculatus_S2_contig9466.17499.1 vs.
Match: tRNA-5-taurinomethyluridine (2-sulfurtransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L065_9STRA)

HSP 1 Score: 248 bits (633), Expect = 8.440e-74
Identity = 149/382 (39.01%), Postives = 202/382 (52.88%), Query Frame = 1
Query:    1 WNQVFEPSLQEFARCRTPNMDVACNRFIKFDAFREHALGRMSADFVATGHYARTAPGPDGDW-SRPVLRQAQDGNKDQTYFLSGVPSEGLAKVLFPLGGLTKPEVRRLAEEAGLPVARKRESMGVCFVGKRRSWASFISQYLTPSPGNFVCVDTGEVVGRHGGVQLYTVGQKSHLDGMPEKYYVAGLDSDTNSVFVARGAENLSLFARGLSVLASEFSWVAGDPPSELLSCSGIHPSVRVRREATTVAGIEAPAPTKKLPPAASGEEPIDAGDIEGPPPILRCEYRSRHRQALLPCDVELLGGGGSGASVPRPV-------------VHVHFDEPAKAIAPGQVLALYKE-GVCLGGGPILRAEGHCS-PALFRSTPP-PSP 1095
            WN VF P L E+A+  TPN DV CNR IKFDAF +HA  ++ ADF+ATGHYA+  P    D  S   L  A D NKDQ+YFLS V  +   +V+FPLG LTKP+VR++A +AGL  A K+ESMG+CF+GKR  + SF++QY+ P  G+FV V++G V+ +H G   YT+GQ +   G P K++V G      ++F+A G  + SLF     V A+ F+W+ G P                                          E +  G        +RC+YR+R+RQ L  C V ++    +     RP              +HV FD P + IAPGQ L LY++ G+C GGG I     HC+ P+ F    P PSP
Sbjct:  114 WNNVFSPCLDEYAQGFTPNPDVLCNREIKFDAFAQHAK-QLGADFIATGHYAQLKPVAASDGTSMLALHAAVDTNKDQSYFLSHVLGQAFQQVIFPLGNLTKPQVRQIAADAGLHTAMKKESMGICFIGKR-PFGSFLAQYVPPRRGHFVSVESGNVLHQHDGFSAYTIGQGAKYAGQPLKWFVVGKRDADAAIFIAPGTHHPSLFCDRAYVSATAFNWIVGQP------------------------------------------ETLQPGQS------IRCQYRARYRQPLADCTVSVVDAVDASVLQQRPTASDDDKRASPPLFLHVEFDTPQRGIAPGQSLVLYRDDGLCFGGGAI-----HCAGPSYFEQNKPLPSP 440          
BLAST of mRNA_E_fasciculatus_S2_contig9466.17499.1 vs.
Match: tRNA-5-taurinomethyluridine (2-sulfurtransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZBB0_9STRA)

HSP 1 Score: 246 bits (627), Expect = 3.690e-73
Identity = 140/360 (38.89%), Postives = 194/360 (53.89%), Query Frame = 1
Query:    1 WNQVFEPSLQEFARCRTPNMDVACNRFIKFDAFREHALGRMSADFVATGHYARTAPGPDGDWSRPVLRQAQDGNKDQTYFLSGVPSEGLAKVLFPLGGLTKPEVRRLAEEAGLPVARKRESMGVCFVGKRRSWASFISQYLTPSPGNFVCVDTGEVVGRHGGVQLYTVGQKSHLDGMPEKYYVAGLDSDTNSVFVARGAENLSLFARGLSVLASEFSWVAGDPPSELLSCSGIHPSVRVRREATTVAGIEAPAPTKKLPPAASGEEPIDAGDIEGPPPILRCEYRSRHRQALLPCDVELLGGG--GSGASVPRPV---------VHVHFDEPAKAIAPGQVLALYKE-GVCLGGGPILRA 1044
            WN VFEP L ++A+  TPN DV CNR IKFD F +HA   + AD++ATGHYA+    PDG      L  A D NKDQ+YFLS V      KVLFPLGGL KP VR +A EA L  A K++S+G+CF+GKR  ++SF++QY+ P PG+F+ ++ G +V  H G   YT+GQ + + G+P K++V G   +   V +A G ++ +LF+  + V A+ F+W+ G PP+ L +                                                  L C+YR+R+RQ L  C V     G   +G SV +P          + V F+ P + IAP Q L LY++ G+C GGGPIL A
Sbjct:   99 WNNVFEPCLDQYAQGLTPNPDVLCNREIKFDVFAKHAKA-IGADYIATGHYAQLKALPDGS---NALYAAVDANKDQSYFLSHVTGTQFQKVLFPLGGLCKPRVREIAAEANLCTATKKDSVGICFIGKR-PFSSFLAQYVPPRPGSFISIEDGSIVQPHDGYSAYTIGQGAKVSGLPIKWFVVGKREEDAGVLIAPGTQHPALFSDEVFVRANAFNWIQGQPPAALTNGG-----------------------------------------------TLTCQYRARYRQPLATCHVSAASAGDVSAGTSVYQPTATTASNEMYLRVRFELPQRGIAPAQSLVLYQDDGLCFGGGPILAA 406          
BLAST of mRNA_E_fasciculatus_S2_contig9466.17499.1 vs.
Match: tRNA-5-taurinomethyluridine (2-sulfurtransferase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S518_SAPDV)

HSP 1 Score: 243 bits (620), Expect = 4.260e-72
Identity = 147/378 (38.89%), Postives = 202/378 (53.44%), Query Frame = 1
Query:    1 WNQVFEPSLQEFARCRTPNMDVACNRFIKFDAFREHALGRMSADFVATGHYARTAPGPDGDWSRPVLRQAQDGNKDQTYFLSGVPSEGLAKVLFPLGGLTKPEVRRLAEEAGLPVARKRESMGVCFVGKRRSWASFISQYLTPSPGNFVCVDTGEVVGRHGGVQLYTVGQKSHLDGMPEKYYVAGLDSDTNSVFVARGAENLSLFARGLSVLASEFSWVAGDPPSELLSCSGIHPSVRVRREATTVAGIEAPAPTKKLPPAASGEEPIDAGDIEGPPPILRCEYRSRHRQALLPCDVEL--LGGGGSGASVPRPV---------VHVHFDEPAKAIAPGQVLALYKE-GVCLGGGPILRAEGHCSPALFRSTPP-PSP 1095
            WN VFEP L ++A+  TPN DV CNR IKFD F +HAL  + AD++ATGHYA+    PDG      L  A DGNKDQ+YFLS V      +V+FPLGGL KP VR +A EA L  A K++S+G+CF+GKR S+ SF+SQY+ P  G+FV V   + +  H G   YT+GQ + + G+P K++V G   +  +VF+A G  + +LF+  + V AS F+W+ G  P+ L +                                                  LRC+YR+R+RQ L  C + +  +    SG SV +P          + V FD P + +AP Q L LY++ G+C GGGPIL A     P+ +    P PSP
Sbjct:  101 WNNVFEPCLDQYAKGLTPNPDVLCNREIKFDVFAKHALA-LGADYIATGHYAQLKRLPDGT---NALYAAVDGNKDQSYFLSHVTGAQFQRVMFPLGGLCKPRVREIAAEANLCTAAKKDSVGICFIGKR-SFGSFLSQYVPPRTGSFVSVVDEQQMHAHDGYSAYTIGQGAKVSGLPAKWFVVGKRDEDAAVFIAPGTHHPALFSDEVFVRASAFNWIQGHAPAALTNDGS-----------------------------------------------LRCQYRARYRQPLAHCTISMASMDDVTSGLSVYQPTAIAPADEPYLRVQFDVPQRGVAPAQSLVLYEDDGLCYGGGPILGA----GPSYWEQQKPLPSP 422          
BLAST of mRNA_E_fasciculatus_S2_contig9466.17499.1 vs.
Match: tRNA-5-taurinomethyluridine (2-sulfurtransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ5_9STRA)

HSP 1 Score: 235 bits (600), Expect = 5.990e-70
Identity = 140/349 (40.11%), Postives = 183/349 (52.44%), Query Frame = 1
Query:    1 WNQVFEPSLQEFARCRTPNMDVACNRFIKFDAFREHALGRMSADFVATGHYARTAPGPDGDWSRPVLRQAQDGNKDQTYFLSGVPSEGLAKVLFPLGGLTKPEVRRLAEEAGLPVARKRESMGVCFVGKRRSWASFISQYLTPSPGNFVCVDTGEVVGRHGGVQLYTVGQKSHLDGMPEKYYVAGLDSDTNSVFVARGAENLSLFARGLSVLASEFSWVAGDPPSELLSCSGIHPSVRVRREATTVAGIEAPAPTKKLPPAASGEEPIDAGDIEGPPPILRCEYRSRHRQALLPCDVELLGGGGSGASVPRPVVHVHFDEPAKAIAPGQVLALY---KEGVCLGGGPIL 1038
            W+ VF PSL  F++  TPN D  CN  IKF AFR HAL    A   ATGHYA+    P      P LR A D  KDQ+YFL+ VP E L  V+FPLGG+ K EVR LA  AGL  A K++S+G+CFVG+RRS+  F+SQY+TP+PG+FVC  TG  +G H GV+LYT+GQK+ +  M  K++V      +  V V  G E+ +L    L+  A+ F+W AG  P  L                                  A G               +R +Y+ R+R       V L GG          ++H+ FD+P +AI P Q+LALY   +  +CLGGGPIL
Sbjct:   70 WHDVFAPSLDVFSQGNTPNPDALCNARIKFGAFRAHALATHGAALFATGHYAQLFHPPPQQGPPPRLRAAVDPIKDQSYFLATVPWEALRGVIFPLGGMMKGEVRELAARAGLVTAAKKDSVGICFVGQRRSFGGFLSQYITPTPGDFVCGQTGARLGPHEGVELYTLGQKARIANMAAKWFVCAKRQRSGDVVVVPGTEHPALMCGALTADAAAFAWGAGAAPRAL----------------------------------AEGR-------------AMRVQYKVRYRSGRETGTVRLRGG----------LLHLEFDKPERAITPHQLLALYGGPEFDICLGGGPIL 361          
BLAST of mRNA_E_fasciculatus_S2_contig9466.17499.1 vs.
Match: tRNA-5-taurinomethyluridine (2-sulfurtransferase n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9T8J4_9VIRI)

HSP 1 Score: 232 bits (592), Expect = 5.820e-67
Identity = 156/379 (41.16%), Postives = 203/379 (53.56%), Query Frame = 1
Query:    1 WNQVFEPSLQEFARCRTPNMDVACNRFIKFDAFREHALGRMSADFVATGHYARTAP-GPDGDWSRPVLRQAQDGNKDQTYFLSGVPSEGLAKVLFPLGGLTKPEVRRLAEEAGLPVARKRESMGVCFVGKRRSWASFISQYLTPS--PGNFVCVDTGEVVGRHGGVQLYTVGQKSHLDGMPEKYYVAGLDSDTNSVFVARGAENLSLFARGLSVLASEFSWVAGDPPSELLSCSGIHPSVRVRREATTVAGIEAPAPTK----KLPPAASGEEPIDA-GDIEGPPPILRCEYRSRHRQALLPCDVELLGGGGSGASVPRPVVHVHFDEPAKAIAPGQVLALYKEGVCLGGGPIL----------RAEGHCSPALFRSTP 1083
            W++VF P+L  +A   TPN DVACN  +KF AF EHA  R+ AD VATGHYAR  P       S   L    D   DQ+YFL+GV S  L++ LFPLG + K +VR  A    L VA+KR S G+CFVG+RR +  FIS Y+      G FV V++G  VG H GV L+T+GQ++ L G  E Y+VAG D+    ++VAR +++ +L  RG +  A  FSWVAG  P+   S +G+  + + R  AT  AG  A A +     ++PP+     P  A G +E                        + GG G+G       V V FDEPAKAI PGQ+L LY    CLGGGPI           RA G  + A+ R TP
Sbjct:  171 WHEVFAPALDAYAAGLTPNPDVACNVHVKFGAFAEHARRRLGADLVATGHYARLRPRAGSASGSLVSLLAGADTAYDQSYFLAGVGSGALSRALFPLGEMLKADVRAAAAARALHVAQKRTSTGLCFVGRRR-FGDFISSYVAGGLEAGEFVDVESGRAVGAHAGVALHTIGQRARLGGANEAYFVAGKDAQRRVLYVARESQSDALLTRGAATGA--FSWVAGAAPAAADSVAGMRVTFKARY-ATPTAGATAWAASSAHAPRVPPSGFWRAPEAALGGVE-----------------------TMSGGAGAG-------VVVRFDEPAKAITPGQMLVLYDGDECLGGGPIQAVGQSLFEERRAAGATAGAVRRETP 515          
BLAST of mRNA_E_fasciculatus_S2_contig9466.17499.1 vs.
Match: tRNA-specific (2-thiouridylase MnmA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A432FRF4_9GAMM)

HSP 1 Score: 223 bits (569), Expect = 2.010e-65
Identity = 140/349 (40.11%), Postives = 178/349 (51.00%), Query Frame = 1
Query:    1 WNQVFEPSLQEFARCRTPNMDVACNRFIKFDAFREHALGRMSADFVATGHYARTAPGPDGDWSRPVLRQAQDGNKDQTYFLSGVPSEGLAKVLFPLGGLTKPEVRRLAEEAGLPVARKRESMGVCFVGKRRSWASFISQYLTPSPGNFVCVDTGEVVGRHGGVQLYTVGQKSHL-----DGMPEK-YYVAGLDSDTNSVFVARGAENLSLFARGLSVLASEFSWVAGDPPSELLSCSGIHPSVRVRREATTVAGIEAPAPTKKLPPAASGEEPIDAGDIEGPPPILRCEYRSRHRQALLPCDVELLGGGGSGASVPRPVVHVHFDEPAKAIAPGQVLALYKEGVCLGGG 1029
            W++VF   L E+   RTPN DV CNR IKF AF +HAL  + ADF+ATGHYAR + G         L QA D NKDQTYFL  VP + L +VLFPLG L KPEVRR AE AG   ARK++S G+CF+G+RR +  F+++YL  +PG  V    GEV+G H G+  YT+GQ+  L      G P+  ++V   D + N + VA+G ++  LF   L   A +  W AG PP+    C                                                    E R RHRQ L PC VE+ G            + V FD P +AI PGQ + LY+EG CLGGG
Sbjct:   76 WDRVFSYFLDEYRAGRTPNPDVLCNREIKFKAFLDHAL-ELGADFIATGHYARLSGGEPRH-----LLQAADANKDQTYFLYMVPQDALKRVLFPLGDLPKPEVRRRAEAAGFSTARKKDSTGICFIGERR-FRDFLARYLPANPGPMV-TPGGEVIGEHQGLMYYTLGQRQGLGIGGVQGHPDAPWFVVAKDLERNRLVVAQGHDHPLLFRSRLE--AEQLHWPAGSPPASRFEC----------------------------------------------------EARCRHRQPLQPCRVEITGK----------TMRVEFDRPQRAITPGQSVVLYREGECLGGG 352          
BLAST of mRNA_E_fasciculatus_S2_contig9466.17499.1 vs.
Match: tRNA-5-taurinomethyluridine (2-sulfurtransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G702_PHYRM)

HSP 1 Score: 223 bits (567), Expect = 5.140e-65
Identity = 141/347 (40.63%), Postives = 179/347 (51.59%), Query Frame = 1
Query:    1 WNQVFEPSLQEFARCRTPNMDVACNRFIKFDAFREHALGRMSADFVATGHYARTAPGPDGDWSRPV-LRQAQDGNKDQTYFLSGVPSEGLAKVLFPLGGLTKPEVRRLAEEAGLPVARKRESMGVCFVGKRRSWASFISQYLTPSPGNFVCVDTGEVVGRHGGVQLYTVGQKSHLDGMPEKYYVAGLDSDTNSVFVARGAENLSLFARGLSVLASEFSWVAGDPPSELLSCSGIHPSVRVRREATTVAGIEAPAPTKKLPPAASGEEPIDAGDIEGPPPILRCEYRSRHRQALLPCDVELLGGGGSGASVPRPVVHVHFDEPAKAIAPGQVLALYK-EGVCLGGGPI 1035
            WN VFEP L+ F    TPN D+ CNR IKF AF E+A  ++ AD+VATGHYA      DG    P+ L  A D  KDQ+YFLS V     A VLFPLGG+ K EVRR+A   GL  A K++S+G+CF+GKR ++A FI QY+    G F  VD GE +  H G   YTVGQ + L GM  K++V G     +SV VA G  N +LF+  L   A +F+W+AGD P EL      H + R                                         +RC YR R+RQ L  C + L           R  + V FD P + + P Q L LY+ +G+C GGGPI
Sbjct:   79 WNSVFEPCLEGFEEGLTPNPDILCNREIKFKAFTEYAQ-KIGADYVATGHYAALRRAEDGG---PLNLCAAVDETKDQSYFLSSVDGRAFANVLFPLGGMCKTEVRRIAASEGLCTATKKDSVGICFIGKR-NFADFIHQYIQRQEGFFYTVD-GEKMYPHHGFTAYTVGQGARLQGMSAKWFVVGKHKSDHSVVVAEGTRNPALFSDALFASAGQFNWMAGDLPREL------HETGR-----------------------------------------MRCFYRVRYRQDLDECTISL--------REKRSYLRVDFDHPQRGVTPEQALVLYRADGICYGGGPI 364          
BLAST of mRNA_E_fasciculatus_S2_contig9466.17499.1 vs.
Match: tRNA-5-taurinomethyluridine (2-sulfurtransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WKK9_9STRA)

HSP 1 Score: 224 bits (571), Expect = 8.750e-65
Identity = 135/381 (35.43%), Postives = 194/381 (50.92%), Query Frame = 1
Query:    1 WNQVFEPSLQEFARCRTPNMDVACNRFIKFDAFREHALGRMSADFVATGHYARTAPGPDGDWSRPVLRQAQDGNKDQTYFLSGVPSEGLAKVLFPLGGLTKPEVRRLAEEAGLPVARKRESMGVCFVGKRRSWASFISQYLTPSPGNFVCVDTGEVVGRHGGVQLYTVGQKSHLDGMPEKYYVAGLDSDTNSVFVARGAENLSLFARGLSVLASEFSWVAGDPPSELLSCSGIHPSVRVRREATTVAGIEAPAPTKKLPPAASGEEPIDAGDIEGPPPILRCEYRSRHRQALLPCDV------ELLGGGGSGASVPRP-----VVHVHFDEPAKAIAPGQVLALYKE-GVCLGGGPILRAEGHCSPALFRSTPPPSPQLGV 1107
            WN VF P L E+A+  TPN D+ CNR IKFDAF  +A   + AD++ATGHYA+  P  D   S   L  A DGNKDQ+YFLS V +    KV FPLG LTKP+VR +A +A L  A  +ESMG+CF+GKR  + SF++QY+ P  G+F  +++G+ +  H G   YT+GQ +   G P K++V G      ++ +A G  + +LF+    V    F+W+   P +                       ++ P+P +                        +C YR+R+RQ L  C V      E+L    +    P        +H+ FD P +AIAPGQ + LY++ G+C GGG +  A G     + +  P P P+  V
Sbjct:  103 WNNVFSPCLDEYAQGWTPNPDLLCNREIKFDAFARYAHEHLGADWIATGHYAQLKPA-DAQSSALALYAAVDGNKDQSYFLSHVHTSAFQKVRFPLGALTKPQVRAIATDANLSAATAKESMGICFIGKR-PFGSFLAQYVAPRVGHFESIESGKRLHAHDGFSSYTIGQGAKYSGQPVKWFVVGKREHDAAILIAPGTHHPALFSDHALVPTKAFNWITLPPLA-----------------------LDQPSPQR-----------------------FQCWYRARYRQPLSRCTVTISSADEMLASSSTHQQRPSSSPHNLFLHIEFDVPQRAIAPGQSIVLYRDDGLCFGGGAV-HAAGPSYFEMSKPLPSPLPEWSV 434          
BLAST of mRNA_E_fasciculatus_S2_contig9466.17499.1 vs.
Match: tRNA-5-taurinomethyluridine (2-sulfurtransferase n=10 Tax=Phytophthora TaxID=4783 RepID=W2QT47_PHYPN)

HSP 1 Score: 222 bits (565), Expect = 1.500e-63
Identity = 145/373 (38.87%), Postives = 184/373 (49.33%), Query Frame = 1
Query:    1 WNQVFEPSLQEFARCRTPNMDVACNRFIKFDAFREHALGRMSADFVATGHYARTAP----GPDGDWSRPVLRQAQDGNKDQTYFLSGVPSEGLAKVLFPLGGLTKPEVRRLAEEAGLPVARKRESMGVCFVGKRRSWASFISQYLTPSPGNFVCVDTGEVVGRHGGVQLYTVGQKSHLDGMPEKYYVAGLDSDTNSVFVARGAENLSLFARGLSVLASEFSWVAGDPPSELLSCSGIHPSVRVRREATTVAGIEAPAPTKKLPPAASGEEPIDAGDIEGPPPILRCEYRSRHRQALLPCDVEL--------------------LGGGGSGASVPRPVVHVHFDEPAKAIAPGQVLALYKE-GVCLGGGPILRA 1044
            WNQVF P L+ +    TPN D+ CNR IKF AF E+A  ++ AD+VATGHYA   P    GP      P L  A+D  KDQ+YFLS V     A VLFPLGG+ K EVR++AE  GL  A K++S+G+CF+GKR ++A FI QY+    G F  VD GE +  H G   YTVGQ + L GM  K++V G     +SV VA G  N +LF+  L   A+EF+W+AG  P EL                                         D G        +RC YR R+RQ L  C + L                    L  G    S  R  + V FD P + + P Q L LY++ G+C GGGPI  A
Sbjct:  128 WNQVFAPCLEGYEEGLTPNPDILCNREIKFKAFTEYAK-KIGADYVATGHYAALRPAHGCGP------PNLCAAEDDTKDQSYFLSSVDGRAFANVLFPLGGMRKTEVRQIAEREGLCTATKKDSVGICFIGKR-NFADFIHQYIERQEGYFYTVD-GEKMHSHLGFTAYTVGQGARLQGMSAKWFVVGKHKSDHSVIVAEGTRNPALFSDTLFASATEFNWMAGVLPQELR----------------------------------------DTG-------CMRCFYRVRYRQDLDECTISLVSNHEVRASASKLHDWQPEPLADGEDEESRERSYLRVDFDHPQRGVTPEQALVLYRDDGLCYGGGPIAAA 444          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9466.17499.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
tRNA-5-taurinomethyluridine4.940e-23786.422-sulfurtransferase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
tRNA-5-taurinomethyluridine8.440e-7439.012-sulfurtransferase n=1 Tax=Aphanomyces stellatus ... [more]
tRNA-5-taurinomethyluridine3.690e-7338.892-sulfurtransferase n=1 Tax=Achlya hypogyna TaxID=... [more]
tRNA-5-taurinomethyluridine4.260e-7238.892-sulfurtransferase n=1 Tax=Saprolegnia diclina (s... [more]
tRNA-5-taurinomethyluridine5.990e-7040.112-sulfurtransferase n=1 Tax=Tribonema minus TaxID=... [more]
tRNA-5-taurinomethyluridine5.820e-6741.162-sulfurtransferase n=1 Tax=Prasinoderma coloniale... [more]
tRNA-specific2.010e-6540.112-thiouridylase MnmA n=1 Tax=Gammaproteobacteria b... [more]
tRNA-5-taurinomethyluridine5.140e-6540.632-sulfurtransferase n=1 Tax=Phytophthora ramorum T... [more]
tRNA-5-taurinomethyluridine8.750e-6535.432-sulfurtransferase n=1 Tax=Aphanomyces euteiches ... [more]
tRNA-5-taurinomethyluridine1.500e-6338.872-sulfurtransferase n=10 Tax=Phytophthora TaxID=47... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9466contigE_fasciculatus_S2_contig9466:2130..5974 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score634.4
Seed ortholog evalue3.2e-179
Seed eggNOG ortholog2880.D8LTT0
Preferred nameTRMU
Model size1393
KEGG koko:K21027
Hectar predicted targeting categoryother localisation
GOsGO:0000959,GO:0000963,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0016783,GO:0031974,GO:0031981,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0061708,GO:0070013,GO:0070525,GO:0070899,GO:0070900,GO:0070903,GO:0071704,GO:0090304,GO:0090646,GO:0106054,GO:0140053,GO:0140098,GO:0140101,GO:1900864,GO:1901360,GO:1990799
Exons6
EggNOG free text desc.mitochondrial tRNA thio-modification
EggNOG OGsCOG0482@1,KOG2805@2759
Ec32 ortholog descriptiontRNA-specific 2-thiouridylase
Ec32 orthologEc-28_002930.1
EC2.8.1.14
Cds size1092
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9466.17499.1prot_E_fasciculatus_S2_contig9466.17499.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9466 2374..5394 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842594.865485-UTR-E_fasciculatus_S2_contig9466:2129..23731696842594.865485-UTR-E_fasciculatus_S2_contig9466:2129..2373Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9466 2130..2373 -
1696842594.9498868-UTR-E_fasciculatus_S2_contig9466:5394..54091696842594.9498868-UTR-E_fasciculatus_S2_contig9466:5394..5409Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9466 5395..5409 -
1696842594.9620452-UTR-E_fasciculatus_S2_contig9466:5932..59741696842594.9620452-UTR-E_fasciculatus_S2_contig9466:5932..5974Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9466 5933..5974 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842594.8801715-CDS-E_fasciculatus_S2_contig9466:2373..30171696842594.8801715-CDS-E_fasciculatus_S2_contig9466:2373..3017Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9466 2374..3017 -
1696842594.8951492-CDS-E_fasciculatus_S2_contig9466:3394..34631696842594.8951492-CDS-E_fasciculatus_S2_contig9466:3394..3463Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9466 3395..3463 -
1696842594.9093637-CDS-E_fasciculatus_S2_contig9466:3796..39591696842594.9093637-CDS-E_fasciculatus_S2_contig9466:3796..3959Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9466 3797..3959 -
1696842594.9279659-CDS-E_fasciculatus_S2_contig9466:4802..49301696842594.9279659-CDS-E_fasciculatus_S2_contig9466:4802..4930Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9466 4803..4930 -
1696842594.9398155-CDS-E_fasciculatus_S2_contig9466:5306..53941696842594.9398155-CDS-E_fasciculatus_S2_contig9466:5306..5394Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9466 5307..5394 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9466.17499.1

>prot_E_fasciculatus_S2_contig9466.17499.1 ID=prot_E_fasciculatus_S2_contig9466.17499.1|Name=mRNA_E_fasciculatus_S2_contig9466.17499.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=364bp
MDVACNRFIKFDAFREHALGRMSADFVATGHYARTAPGPDGDWSRPVLRQ
AQDGNKDQTYFLSGVPSEGLAKVLFPLGGLTKPEVRRLAEEAGLPVARKR
ESMGVCFVGKRRSWASFISQYLTPSPGNFVCVDTGEVVGRHGGVQLYTVG
QKSHLDGMPEKYYVAGLDSDTNSVFVARGAENLSLFARGLSVLASEFSWV
AGDPPSELLSCSGIHPSVRVRREATTVAGIEAPAPTKKLPPAASGEEPID
AGDIEGPPPILRCEYRSRHRQALLPCDVELLGGGGSGASVPRPVVHVHFD
EPAKAIAPGQVLALYKEGVCLGGGPILRAEGHCSPALFRSTPPPSPQLGV
KSSKPVATKSNKL*
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mRNA from alignment at E_fasciculatus_S2_contig9466:2130..5974-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9466.17499.1 ID=mRNA_E_fasciculatus_S2_contig9466.17499.1|Name=mRNA_E_fasciculatus_S2_contig9466.17499.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3845bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9466:2130..5974- (Ectocarpus fasciculatus EfasUO2)
TGGAACCAGGTCTTTGAACCATCTCTCCAGGAGTTTGCTAGGGTGAGCCA CGGGACCAACACCTTCATATTGCATTTGTTCATTTGTTCCTTCTAGTTTT TTCCGTCCAACAGGATGTCCCGTTCTTGCAGCGCGATGTATCCGATGACG TCTCTTATGCCGACTTATTAGAGAAATCAGGTCATGCATGTTCTAGCGCT TGGCTGGGTGCCCCCGTGCTGTCCGTCAGCCTATTGTTCTGGTGTTCCGT ACAACTCCACGTCCCACCTGTTGTTCTCGTGTTTTTGATTGCGTCCTCGT CCTGGCGCAACCTTGCCCGTTTCCCGTCTAATCGAAGCAACACCTTGTGG ACGTACACGGAACGGCATGCACTTACAATAGCTCTTCCGGCAATCGCACG AATCCGATCGATCACCCTCATGTTTGTGCGTCTGTGCATTGGTGATGACC CGTTGACGCCATGTGAGTACTGCTGTTGCATCAGTCGCACGAAAATCAAA TCAAGGAACGCCCACAATCTCTGTCCGTCGCCTGTCTATCGTGAAATGGT GAAATGAAACAACAGTGTCGCACGCCGAATATGGACGTCGCGTGCAACCG CTTCATCAAGTTCGACGCTTTCCGGGAGCACGCGCTGGGCAGGATGTCCG CGGACTTCGTGGCCACCGGTGAGTGGGAATATAGGGCTTTTATCCTCGTG GACGGCACGGAACCCCCGATACCGGCCGCCTCCGACGCATGAGTGGCCCC GTCTTGTGTGCTTGCTTTGATTCCCCATCGTGCTCATGTTCTTGCTGGCG CTCTGTCACTGCCGATCAATGGAACGCAGGTGGGCGACAGCCTATGAGCG CTGTGGGATGCGATCTTTTCCGAAAGTGTTTTCTTATTTGTTGCCCAAGT GCCACAACTTTCGGGGGGCAATGGTCACCTTTGTCTCCGTCACTGTCTTG AAGACAGACCACTGCCAATACCCGATGTATGCACACGTGTCTTGTTTTTT TCTTGCGATCCCATTCATGTCTGTGGGGTGCAACACCCACGAAGGCCACT ACGCCAGGACAGCACCGGGTCCCGACGGGGATTGGTCCAGGCCGGTGTTG AGACAGGCGCAGGACGGAAACAAGGACCAGACGTACTTCTTGTCCGGCGT GCCTAGCGAGGGGCTTGCCAAGGTAATTCGCTGCTTTTTTTCTCTTCTGT GCTCCTCCTGTGCAACACATGTGGAATTCCAGCTGCTGAATAAAGTATGA ACGTATTCCTCCGCCGCACTGCTTCCCGCTCTCTACAGCTGCTGCTCCAG CTGCCTAGCCCTTGTGGAAGGGAAGGATAGCGGCGTTATTTTTTTGAAAC CCATGGGTCGATGTACTAGGTCCCCTCGCTATATACAACAATGTGAAATC CGGCTTGCAAGCACCTCATCGCCGTTGCTACTGCTATTTGGTGTTGGACT TGATGCCCTGATATTGTGAAATCGGTATTGTGAAACCACCAAGCCAGGAC TTTCATCCTAGGTTTCTCATCCGTCCTGCCTACTCCTAGTCAGAATGTAT TGATGGCCATCCCATTCCTTTCAAGGATCCTTCGCTGTGTAGTTTCTACC GAACTGTGTGGTCGTTCCTCTCAAGAGCTTCAGTCCCTGGCCAAAGCTCC AGGCACAAGAGTTCCTCGTTGTGCATGCCTCCCTTCCTTTTCGGTCCTTC CCTTTTGCGTGGCCACAGAAGTCAGGAGCCGGAACAGGAAACCCACCGCA TGCACTTGCACGGACATCAACCGGTAGTGCAAAAATCATTCCCTGCAACA TGTCACTCTCCTTGATTGATGCGTTCTCTATCGATTATTCATTGTAGGTG ACATGACATACCTGGTGGTTACCTTGCGACCACCGCTGTAGCCGTCTGCA TAAGCTGGACCAGTGCCGATGCTAACAGGTACTCCACGGAGGCCCGGATG GTTTACAATGCGAAGACAACCTGCCACAACAACAACAACAACAACGAAAC GGCCAACTCGGACAGGTTTTGTTTCCCCTGGGAGGCCTCACGAAGCCCGA GGTGCGTCGTCTTGCCGAAGAAGCCGGCCTCCCGGTGGCCAGGAAGCGGG AGTCGATGGGCGTGTGCTTCGTGGGGAAGCGCCGGAGCTGGGCGAGCTTC ATATCTCAGTACCTCACCCCGAGCCCAGGTGCGTACCTCGTACGATATGT CCAGTGGGCAGCACTGCTGGCAACAACAGCAGCTCCGCACAGATCGGAGA GTAGTCCGTCGACAGGATACCTTTTGTAAGCGTACGAAGAAGCGGCACTT GGTCGAGCGGCACTACTTCGTCGGGAGGTTTTGTTTTTGGGAGCATGCAG ATGGGTGAGCTTGCTGCTGTCCTCATGTGACTGCCCTCTCTGCCATGCCT CCTGCTGTACCGCCGAATACCTCGTGGCGTTTTTCCGCTGCGCGAAGCGA TACATTTTTCTCGCTCACTGAATGAAACACCCTCCCGGCCCGGTTTGCGG GCCTCCTACAGGAAACTTCGTGTGCGTAGACACCGGAGAGGTCGTGGGCC GGCACGGCGGCGTCCAGCTTTACACAGTAGGTGAGGGCTAGCCGCGTAGC GGCGCGGCTGATCCCAGCAGCGCTGAAGCACCCAGTCAACAGTCGAAACT GAAGGAGAAGACAGGGCCGGATGATGGCCGGAATGGTGTGGCGACTGCTC GGCATGTATGTCGCTTGGCCTACGGTTTTTTGCCGGGCATGAGGTGGTGG ACACGCGCACAGCGCTTGCCACGAGAAACATGCACACAGCAGTAGAACAT GGTGCTCTTTGTCCTTTCTCTCCTAGCCCCAATGTTCTATCCTCTCGAGG ACGCGTGGTATATGGTCTCAAGGATGCAAGCATTCTGAACATGACCCCCC CACCGCCGAACGCTCGCTCCACGATACGATACCGCGAAAATCGAAAACCC ATCGCAGGGCAAAAGTCGCACTTGGATGGCATGCCCGAGAAGTACTACGT GGCCGGGCTAGACTCCGACACCAACTCCGTCTTCGTGGCGAGGGGGGCAG AGAACCTTTCCCTCTTCGCCCGGGGCTTGTCCGTGCTCGCGTCGGAGTTT AGCTGGGTGGCGGGAGACCCTCCCTCGGAGCTACTGTCCTGCAGCGGAAT CCACCCCTCAGTACGCGTGAGACGAGAAGCAACTACGGTAGCGGGAATAG AAGCACCGGCGCCGACAAAAAAACTGCCACCGGCAGCATCGGGAGAAGAA CCGATAGACGCGGGCGACATAGAGGGGCCGCCGCCTATCTTGCGGTGCGA ATACCGGAGTCGCCACAGGCAGGCCCTCCTCCCGTGTGACGTGGAACTGC TTGGCGGCGGTGGGAGCGGGGCTTCGGTGCCTCGCCCCGTGGTGCACGTG CACTTCGACGAGCCGGCGAAAGCGATCGCACCCGGTCAGGTATTGGCCCT GTACAAGGAAGGCGTTTGCCTGGGAGGCGGCCCGATATTGCGGGCGGAAG GGCACTGTTCCCCAGCGCTGTTTCGATCAACGCCGCCGCCGTCGCCACAA CTCGGCGTAAAGTCGTCGAAACCCGTAGCGACCAAAAGCAACAAGTTGTG ACGTCATACAAAAACGTACCAGATAATACAGAAATAAGGTCTCCCCCCGT TGTTGAAAAGAGGTTGTTCGTGTGTCCGCTATTTAGTCGATGGGTGTGTA CAGAATTGTTTGTGGCGTGTACGCTTTGGTGTGGGTTTCGCAGATGCCCT CTTCATGTTGTTCGTTCGGTACACTCGCCTCTTGCCGGCGCGCCAACTCC GGAAGGAAGCGGCGGATTCATGACATCATGAACGTTTTGTCGGTG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9466:2130..5974-

>mRNA_E_fasciculatus_S2_contig9466.17499.1 ID=mRNA_E_fasciculatus_S2_contig9466.17499.1|Name=mRNA_E_fasciculatus_S2_contig9466.17499.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1092bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9466:2130..5974- (Ectocarpus fasciculatus EfasUO2)
ATGGACGTCGCGTGCAACCGCTTCATCAAGTTCGACGCTTTCCGGGAGCA
CGCGCTGGGCAGGATGTCCGCGGACTTCGTGGCCACCGGCCACTACGCCA
GGACAGCACCGGGTCCCGACGGGGATTGGTCCAGGCCGGTGTTGAGACAG
GCGCAGGACGGAAACAAGGACCAGACGTACTTCTTGTCCGGCGTGCCTAG
CGAGGGGCTTGCCAAGGTTTTGTTTCCCCTGGGAGGCCTCACGAAGCCCG
AGGTGCGTCGTCTTGCCGAAGAAGCCGGCCTCCCGGTGGCCAGGAAGCGG
GAGTCGATGGGCGTGTGCTTCGTGGGGAAGCGCCGGAGCTGGGCGAGCTT
CATATCTCAGTACCTCACCCCGAGCCCAGGAAACTTCGTGTGCGTAGACA
CCGGAGAGGTCGTGGGCCGGCACGGCGGCGTCCAGCTTTACACAGTAGGG
CAAAAGTCGCACTTGGATGGCATGCCCGAGAAGTACTACGTGGCCGGGCT
AGACTCCGACACCAACTCCGTCTTCGTGGCGAGGGGGGCAGAGAACCTTT
CCCTCTTCGCCCGGGGCTTGTCCGTGCTCGCGTCGGAGTTTAGCTGGGTG
GCGGGAGACCCTCCCTCGGAGCTACTGTCCTGCAGCGGAATCCACCCCTC
AGTACGCGTGAGACGAGAAGCAACTACGGTAGCGGGAATAGAAGCACCGG
CGCCGACAAAAAAACTGCCACCGGCAGCATCGGGAGAAGAACCGATAGAC
GCGGGCGACATAGAGGGGCCGCCGCCTATCTTGCGGTGCGAATACCGGAG
TCGCCACAGGCAGGCCCTCCTCCCGTGTGACGTGGAACTGCTTGGCGGCG
GTGGGAGCGGGGCTTCGGTGCCTCGCCCCGTGGTGCACGTGCACTTCGAC
GAGCCGGCGAAAGCGATCGCACCCGGTCAGGTATTGGCCCTGTACAAGGA
AGGCGTTTGCCTGGGAGGCGGCCCGATATTGCGGGCGGAAGGGCACTGTT
CCCCAGCGCTGTTTCGATCAACGCCGCCGCCGTCGCCACAACTCGGCGTA
AAGTCGTCGAAACCCGTAGCGACCAAAAGCAACAAGTTGTGA
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