mRNA_E_fasciculatus_S2_contig9464.17497.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN88_ECTSI) HSP 1 Score: 525 bits (1353), Expect = 1.210e-175 Identity = 264/275 (96.00%), Postives = 268/275 (97.45%), Query Frame = 1
Query: 13 QSMRICYRFSTGVTEAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDNMCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEEDTAGHAGSAEETYGIQIG 837
+SMRICYRFSTGVTEAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQ FFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRW+YLSSFFGVVDVASIAPWYIETILWS+GVYFDAS FRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSA LFYLFEKDNMCTG+AFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEEDT G GSA ETYGIQIG
Sbjct: 927 RSMRICYRFSTGVTEAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQTFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWKYLSSFFGVVDVASIAPWYIETILWSAGVYFDASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSAFLFYLFEKDNMCTGEAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEEDTPGRDGSAGETYGIQIG 1201
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK7_9STRA) HSP 1 Score: 266 bits (679), Expect = 7.540e-78 Identity = 134/247 (54.25%), Postives = 173/247 (70.04%), Query Frame = 1
Query: 34 RFSTGVTEAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDNMCTG--DAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVN 768
RF G T G+ + +A+LI +N +AV+ ESEPS+G + P QP FD EAFSV +FT + RL AP+++ Y + YL+SFFG+VD+ASI PWYI+ IL S+GV FDA FR+LRLFR+LQLE V+AF+LLDDVW +K L A GLLA +VWVGSA LF+L E+ N C G +AF IP +M+YT +FLGGEW IDFT G+++CC C+ GI LF IPVGTVFE+F V++E N
Sbjct: 946 RFVQGNTHWGEWYLRLIALLIAVNCIAVVLESEPSIGESDNPI---VQPLFDAVEAFSVAIFTFDFVARLCTAPVNASYG-TPLNYLTSFFGIVDMASILPWYIQEILVSAGVVFDAGPFRILRLFRLLQLERHVNAFTLLDDVWRGAKGVLKAAGLLAFIVWVGSATLFFLTEQRNECEGVREAFVDIPSSMYYTGIFLGGEWGLIDFTGLGRIVCCFTCIMGIALFAIPVGTVFESFSGVLEEAN 1188
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Shal (protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812X110_9DINO) HSP 1 Score: 246 bits (628), Expect = 1.380e-70 Identity = 124/258 (48.06%), Postives = 176/258 (68.22%), Query Frame = 1
Query: 10 PQSMRICYRFSTGVTEAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDNMCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEE 783
P +R+ +F T AG+L + +LI+LNV+AVIAES + G +GFE FSVLVFT E S ++ AP +S+Y F R Y+ SFFG+VD+ ++AP++I+T++W SG+ F+A FR+ RL RILQLE FV +F+LLDD W + ++T+ ATG +AL+VW+ A LFY FE+DN AF +P +M++T +FLGGEW+ IDFT GK++C V CV GI L+GIP+G VFEAF DV+ + +E++E
Sbjct: 1600 PYKLRMV-KFLEQKTTAGRLCKKAMFLLIILNVLAVIAESMSWVKEAAGSY------VLNGFELFSVLVFTFEYSANVWSAPANSRYMFCRRNYVCSFFGIVDLVTVAPFWIQTVMWLSGLQFNAFVFRIARLLRILQLEDFVESFTLLDDAWRSCRETMVATGFMALLVWICGAVLFYEFEQDNPAMDGAFKDLPSSMYFTIIFLGGEWAMIDFTSGGKIVCLVYCVVGIGLYGIPIGAVFEAFSDVLADKEDEQDE 1850
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DR60_HEMAN) HSP 1 Score: 216 bits (551), Expect = 1.500e-63 Identity = 116/247 (46.96%), Postives = 155/247 (62.75%), Query Frame = 1
Query: 55 EAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDNMCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEEDTAG 795
+ G FD F LI +V V+ ES+PS + FD E + +V+T E MRL AP + +S YL+SFFG D ++ P+YIE G D +A RVLRLFRILQLEHF AF+L+DDV+ KDTL AT LA+++WVG+A F++ EK N G AF +IP++M+YTA+FL GEW ++DFT GKV+CCVL V GI L+ IPVG +F+AF +V+ E EEEE+ +G
Sbjct: 262 DNGVWFDRFNLALIAASVGCVVLESDPSYAS--------WSASFDSLELIATVVYTLEYFMRLAAAPHDRRAGYSVRGYLTSFFGTADFVALLPYYIERGALMYGRPADFAAIRVLRLFRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFVTEKGNPNVGGAFDNIPNSMYYTAIFLSGEWGQVDFTLPGKVICCVLVVAGIGLYSIPVGALFDAFGEVLAEQKEEEEKGKSG 500
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XQ15_HEMAN) HSP 1 Score: 204 bits (519), Expect = 2.650e-62 Identity = 104/204 (50.98%), Postives = 138/204 (67.65%), Query Frame = 1
Query: 184 FDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDNMCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEEDTAG 795
FD E + +V+T E MRL AP + +S YL+SFFG D ++ P+YIE G D +A RVLRLFRILQLEHF AF+L+DDV+ KDTL AT LA+++WVG+A F++ EK N G AF +IP++M+YTA+FL GEW ++DFT GKV+CCVL V GI L+ IPVG +F+AF +V+ E EEEE+ +G
Sbjct: 1 FDSLELVATVVYTLEYFMRLAAAPHDRRAGYSVRGYLTSFFGTADFVALLPYYIERGALMYGRPADFAAIRVLRLFRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFVTEKGNPNVGGAFDNIPNSMYYTAIFLSGEWGQVDFTLPGKVICCVLVVAGIGLYSIPVGALFDAFGEVLAEQKEEEEKGKSG 204
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Hypothetical (protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FML1_9STRA) HSP 1 Score: 207 bits (526), Expect = 5.250e-58 Identity = 114/280 (40.71%), Postives = 159/280 (56.79%), Query Frame = 1
Query: 64 KLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFD---ASAFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDN------------------------------------MCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEED 786
+ F F+ LI+ NV+AV+ E+ P + G G F FD FEA S+ FT E +R+F A + + +S W Y ++FFG+VD S APWY+E IL SG+ A+ FRV LQLE F+ F +D+V+ AS+D L ATGL+A+++WVG LF++FE+ N MC +FSS+PD++FY AVFLGGEW +DFTW G+++C LCV GI L+ IPVGT+FE+F V+ EEEE++
Sbjct: 476 RFFRVFMMSLIVSNVIAVLLETVPEIDKYVGNQPGNF---FDSFEAVSIFFFTLEYGLRVFSARKNLEALYSPWVYCTTFFGIVDFLSTAPWYVEQILLLSGIAESNDTATIFRVXXXXXXLQLEDFLVGFRKIDNVFRASRDVLKATGLMAVIIWVGCGALFFIFEQSNPNFRQCDVSIPLRTKHDTGCYDFESTAACEAYYGDGMCVQSSFSSMPDSLFYVAVFLGGEWGLVDFTWGGRMVCMFLCVIGIALYAIPVGTLFESFGSVIGMDGEEEEDE 752
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8P7_9STRA) HSP 1 Score: 199 bits (505), Expect = 8.460e-58 Identity = 119/288 (41.32%), Postives = 160/288 (55.56%), Query Frame = 1
Query: 43 TGVT-EAGKLFDG--FVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFDASA-----FRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDN------------------------------------------MCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVM 756
TG T K F G F+ +I+ NV+AVI ES P + G G F FD FE SVL+F AE MRLF AP + FS W Y ++FFG+VD+ S APW++E L SG + D+S FR LQLE F+ AFS LD+V+ ASKD L ATGL+AL++WVG LF++FE++N MC F+++P+A+++TAVFL GEW +DFTW G+++C LCV GI L+ IPVGT+F++F V+
Sbjct: 90 TGKTIHTNKSFAGRVFIFTVIITNVLAVIFESIPEVDKAVGNQAGNF---FDVFEMCSVLIFAAEYLMRLFCAPKNRGALFSTWVYATTFFGIVDLLSTAPWFVEEALIYSG-HLDSSGDNAKIFRXXXXXXXLQLEDFMVAFSKLDNVFRASKDVLKATGLMALIIWVGCGALFFIFEENNPNWRSCDSSIPLMTGGDDSNYTDAPGCYDFESTRACNEFYPGMCDQVVFTNVPNALYFTAVFLVGEWGVVDFTWPGRLICLFLCVAGIALYAIPVGTLFDSFGAVL 373
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Hypothetical (protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VPC1_9STRA) HSP 1 Score: 208 bits (529), Expect = 2.240e-57 Identity = 115/267 (43.07%), Postives = 156/267 (58.43%), Query Frame = 1
Query: 79 FVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFDAS----AFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDN-------------------------------------MCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVM 756
F+ +I+LNVVAV+ ES P + G G F FD FE FSV+VF E ++RLF AP + +S + Y ++FFG+VD S APW+IE L SGV + FRV LQLE FV AFS+LD+V+ ASKD ATGLLA+++WVG A LFY+FE++N +C AF++IP+A+++TAVFLGGEW IDFTW G+ +C LCV GI L+ IP+GT+F++F ++
Sbjct: 991 FIFTVIILNVVAVLVESVPEVDRAVGNQPGNF---FDTFEFFSVVVFATEYALRLFCAPKNRNALYSSFIYATTFFGIVDFLSTAPWFIEQALIHSGVISEGGDSVMVFRVXXXXXXLQLEDFVVAFSMLDNVFRASKDVFKATGLLAVIIWVGCAALFYIFEENNPNWRSCDSSVPAHTEDPDFPGCYDFPSTSACNEVYDGLCEQKAFTNIPNALYFTAVFLGGEWGVIDFTWPGRFVCLFLCVAGIGLYAIPIGTLFDSFGAIL 1254
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S063_THAOC) HSP 1 Score: 206 bits (523), Expect = 1.380e-56 Identity = 121/282 (42.91%), Postives = 160/282 (56.74%), Query Frame = 1
Query: 43 TGVTEAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYF--DASAFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDN------------------------------------MCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEE 774
T + G+L FV+ LI+ NV+AVI ES P + G G FD FEA+SV F+ + ++RLF A S +S W Y +FFG+VD+ SI PWYIE +L SSG +A FR LQLE FV AFS LD+V+ ASK L ATGL+AL++W+GS+ LF++FE DN MC+ F+++P +FY AVFLGGEW +DFTW GK++C LCV GI L+ IPVGT+F++F V+ V EE
Sbjct: 924 TKASAVGRLL--FVS-LIVANVLAVILESIPEIDYIVGNERGNA---FDAFEAWSVFFFSLDYALRLFSAQKSRDALYSPWVYSQTFFGIVDLLSILPWYIEAVLASSGKLSGDEARVFRXXXXXXXLQLEDFVVAFSRLDNVYRASKGVLKATGLMALIIWIGSSALFFIFESDNPNFRECDGSVPLIGEGGSLGCYDFESTAACNAVYPGMCSQTVFTNMPSTLFYVAVFLGGEWGVVDFTWRGKIVCIFLCVAGIALYSIPVGTLFDSFGAVIGLVEEE 1199
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Hypothetical (protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GK10_CYCTE) HSP 1 Score: 199 bits (507), Expect = 1.870e-55 Identity = 117/277 (42.24%), Postives = 159/277 (57.40%), Query Frame = 1
Query: 61 GKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFD--------ASAFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDN-------------------------------------MCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVM 756
G +F + +I+LNV+AVIAES P + G G F FD FE SV+ F E +RLF AP + +S + Y ++FFG+VD S P++IE L +YF+ A FRV R+FR+LQLE F+ AFS LD+V+ AS D L ATGLLALV+WVG LFY+FE++N MC AF++IP++++YTAVFLGGEW +DFTW G+ +C LCV GI L+ IP+GT+F++F V+
Sbjct: 428 GYVFSISMFNIIVLNVLAVIAESIPEVDRAVGNQPGNF---FDVFELISVIFFATEYMLRLFCAPKNKAALYSSFIYATTFFGIVDFLSTVPYFIEHAL----IYFNVIQAGSDAAMMFRVFRIFRLLQLEGFIVAFSKLDNVFRASMDVLKATGLLALVIWVGCGSLFYIFEQNNPNFRSCDDSIPTHSTDSSTPGCFDFHTTEECNDVYPGMCKQVAFTNIPNSLYYTAVFLGGEWGLVDFTWPGRFVCLFLCVAGIGLYAIPLGTLFDSFGAVL 697 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9464.17497.1 >prot_E_fasciculatus_S2_contig9464.17497.1 ID=prot_E_fasciculatus_S2_contig9464.17497.1|Name=mRNA_E_fasciculatus_S2_contig9464.17497.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=273bp MRICYRFSTGVTEAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGback to top mRNA from alignment at E_fasciculatus_S2_contig9464:3221..5805- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9464.17497.1 ID=mRNA_E_fasciculatus_S2_contig9464.17497.1|Name=mRNA_E_fasciculatus_S2_contig9464.17497.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2585bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9464:3221..5805- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9464:3221..5805- >mRNA_E_fasciculatus_S2_contig9464.17497.1 ID=mRNA_E_fasciculatus_S2_contig9464.17497.1|Name=mRNA_E_fasciculatus_S2_contig9464.17497.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=819bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9464:3221..5805- (Ectocarpus fasciculatus EfasUO2)back to top |