mRNA_E_fasciculatus_S2_contig9464.17497.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9464.17497.1
Unique NamemRNA_E_fasciculatus_S2_contig9464.17497.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN88_ECTSI)

HSP 1 Score: 525 bits (1353), Expect = 1.210e-175
Identity = 264/275 (96.00%), Postives = 268/275 (97.45%), Query Frame = 1
Query:   13 QSMRICYRFSTGVTEAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDNMCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEEDTAGHAGSAEETYGIQIG 837
            +SMRICYRFSTGVTEAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQ FFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRW+YLSSFFGVVDVASIAPWYIETILWS+GVYFDAS FRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSA LFYLFEKDNMCTG+AFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEEDT G  GSA ETYGIQIG
Sbjct:  927 RSMRICYRFSTGVTEAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQTFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWKYLSSFFGVVDVASIAPWYIETILWSAGVYFDASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSAFLFYLFEKDNMCTGEAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEEDTPGRDGSAGETYGIQIG 1201          
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK7_9STRA)

HSP 1 Score: 266 bits (679), Expect = 7.540e-78
Identity = 134/247 (54.25%), Postives = 173/247 (70.04%), Query Frame = 1
Query:   34 RFSTGVTEAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDNMCTG--DAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVN 768
            RF  G T  G+ +   +A+LI +N +AV+ ESEPS+G +  P     QP FD  EAFSV +FT +   RL  AP+++ Y  +   YL+SFFG+VD+ASI PWYI+ IL S+GV FDA  FR+LRLFR+LQLE  V+AF+LLDDVW  +K  L A GLLA +VWVGSA LF+L E+ N C G  +AF  IP +M+YT +FLGGEW  IDFT  G+++CC  C+ GI LF IPVGTVFE+F  V++E N
Sbjct:  946 RFVQGNTHWGEWYLRLIALLIAVNCIAVVLESEPSIGESDNPI---VQPLFDAVEAFSVAIFTFDFVARLCTAPVNASYG-TPLNYLTSFFGIVDMASILPWYIQEILVSAGVVFDAGPFRILRLFRLLQLERHVNAFTLLDDVWRGAKGVLKAAGLLAFIVWVGSATLFFLTEQRNECEGVREAFVDIPSSMYYTGIFLGGEWGLIDFTGLGRIVCCFTCIMGIALFAIPVGTVFESFSGVLEEAN 1188          
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Shal (protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812X110_9DINO)

HSP 1 Score: 246 bits (628), Expect = 1.380e-70
Identity = 124/258 (48.06%), Postives = 176/258 (68.22%), Query Frame = 1
Query:   10 PQSMRICYRFSTGVTEAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDNMCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEE 783
            P  +R+  +F    T AG+L    + +LI+LNV+AVIAES   +    G          +GFE FSVLVFT E S  ++ AP +S+Y F R  Y+ SFFG+VD+ ++AP++I+T++W SG+ F+A  FR+ RL RILQLE FV +F+LLDD W + ++T+ ATG +AL+VW+  A LFY FE+DN     AF  +P +M++T +FLGGEW+ IDFT  GK++C V CV GI L+GIP+G VFEAF DV+ +  +E++E
Sbjct: 1600 PYKLRMV-KFLEQKTTAGRLCKKAMFLLIILNVLAVIAESMSWVKEAAGSY------VLNGFELFSVLVFTFEYSANVWSAPANSRYMFCRRNYVCSFFGIVDLVTVAPFWIQTVMWLSGLQFNAFVFRIARLLRILQLEDFVESFTLLDDAWRSCRETMVATGFMALLVWICGAVLFYEFEQDNPAMDGAFKDLPSSMYFTIIFLGGEWAMIDFTSGGKIVCLVYCVVGIGLYGIPIGAVFEAFSDVLADKEDEQDE 1850          
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DR60_HEMAN)

HSP 1 Score: 216 bits (551), Expect = 1.500e-63
Identity = 116/247 (46.96%), Postives = 155/247 (62.75%), Query Frame = 1
Query:   55 EAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDNMCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEEDTAG 795
            + G  FD F   LI  +V  V+ ES+PS           +   FD  E  + +V+T E  MRL  AP   +  +S   YL+SFFG  D  ++ P+YIE      G   D +A RVLRLFRILQLEHF  AF+L+DDV+   KDTL AT  LA+++WVG+A  F++ EK N   G AF +IP++M+YTA+FL GEW ++DFT  GKV+CCVL V GI L+ IPVG +F+AF +V+ E  EEEE+  +G
Sbjct:  262 DNGVWFDRFNLALIAASVGCVVLESDPSYAS--------WSASFDSLELIATVVYTLEYFMRLAAAPHDRRAGYSVRGYLTSFFGTADFVALLPYYIERGALMYGRPADFAAIRVLRLFRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFVTEKGNPNVGGAFDNIPNSMYYTAIFLSGEWGQVDFTLPGKVICCVLVVAGIGLYSIPVGALFDAFGEVLAEQKEEEEKGKSG 500          
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XQ15_HEMAN)

HSP 1 Score: 204 bits (519), Expect = 2.650e-62
Identity = 104/204 (50.98%), Postives = 138/204 (67.65%), Query Frame = 1
Query:  184 FDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDNMCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEEDTAG 795
            FD  E  + +V+T E  MRL  AP   +  +S   YL+SFFG  D  ++ P+YIE      G   D +A RVLRLFRILQLEHF  AF+L+DDV+   KDTL AT  LA+++WVG+A  F++ EK N   G AF +IP++M+YTA+FL GEW ++DFT  GKV+CCVL V GI L+ IPVG +F+AF +V+ E  EEEE+  +G
Sbjct:    1 FDSLELVATVVYTLEYFMRLAAAPHDRRAGYSVRGYLTSFFGTADFVALLPYYIERGALMYGRPADFAAIRVLRLFRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFVTEKGNPNVGGAFDNIPNSMYYTAIFLSGEWGQVDFTLPGKVICCVLVVAGIGLYSIPVGALFDAFGEVLAEQKEEEEKGKSG 204          
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Hypothetical (protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FML1_9STRA)

HSP 1 Score: 207 bits (526), Expect = 5.250e-58
Identity = 114/280 (40.71%), Postives = 159/280 (56.79%), Query Frame = 1
Query:   64 KLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFD---ASAFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDN------------------------------------MCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEEEEED 786
            + F  F+  LI+ NV+AV+ E+ P +    G   G F   FD FEA S+  FT E  +R+F A  + +  +S W Y ++FFG+VD  S APWY+E IL  SG+      A+ FRV      LQLE F+  F  +D+V+ AS+D L ATGL+A+++WVG   LF++FE+ N                                    MC   +FSS+PD++FY AVFLGGEW  +DFTW G+++C  LCV GI L+ IPVGT+FE+F  V+    EEEE++
Sbjct:  476 RFFRVFMMSLIVSNVIAVLLETVPEIDKYVGNQPGNF---FDSFEAVSIFFFTLEYGLRVFSARKNLEALYSPWVYCTTFFGIVDFLSTAPWYVEQILLLSGIAESNDTATIFRVXXXXXXLQLEDFLVGFRKIDNVFRASRDVLKATGLMAVIIWVGCGALFFIFEQSNPNFRQCDVSIPLRTKHDTGCYDFESTAACEAYYGDGMCVQSSFSSMPDSLFYVAVFLGGEWGLVDFTWGGRMVCMFLCVIGIALYAIPVGTLFESFGSVIGMDGEEEEDE 752          
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8P7_9STRA)

HSP 1 Score: 199 bits (505), Expect = 8.460e-58
Identity = 119/288 (41.32%), Postives = 160/288 (55.56%), Query Frame = 1
Query:   43 TGVT-EAGKLFDG--FVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFDASA-----FRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDN------------------------------------------MCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVM 756
            TG T    K F G  F+  +I+ NV+AVI ES P +    G   G F   FD FE  SVL+F AE  MRLF AP +    FS W Y ++FFG+VD+ S APW++E  L  SG + D+S      FR       LQLE F+ AFS LD+V+ ASKD L ATGL+AL++WVG   LF++FE++N                                          MC    F+++P+A+++TAVFL GEW  +DFTW G+++C  LCV GI L+ IPVGT+F++F  V+
Sbjct:   90 TGKTIHTNKSFAGRVFIFTVIITNVLAVIFESIPEVDKAVGNQAGNF---FDVFEMCSVLIFAAEYLMRLFCAPKNRGALFSTWVYATTFFGIVDLLSTAPWFVEEALIYSG-HLDSSGDNAKIFRXXXXXXXLQLEDFMVAFSKLDNVFRASKDVLKATGLMALIIWVGCGALFFIFEENNPNWRSCDSSIPLMTGGDDSNYTDAPGCYDFESTRACNEFYPGMCDQVVFTNVPNALYFTAVFLVGEWGVVDFTWPGRLICLFLCVAGIALYAIPVGTLFDSFGAVL 373          
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Hypothetical (protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VPC1_9STRA)

HSP 1 Score: 208 bits (529), Expect = 2.240e-57
Identity = 115/267 (43.07%), Postives = 156/267 (58.43%), Query Frame = 1
Query:   79 FVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFDAS----AFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDN-------------------------------------MCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVM 756
            F+  +I+LNVVAV+ ES P +    G   G F   FD FE FSV+VF  E ++RLF AP +    +S + Y ++FFG+VD  S APW+IE  L  SGV  +       FRV      LQLE FV AFS+LD+V+ ASKD   ATGLLA+++WVG A LFY+FE++N                                     +C   AF++IP+A+++TAVFLGGEW  IDFTW G+ +C  LCV GI L+ IP+GT+F++F  ++
Sbjct:  991 FIFTVIILNVVAVLVESVPEVDRAVGNQPGNF---FDTFEFFSVVVFATEYALRLFCAPKNRNALYSSFIYATTFFGIVDFLSTAPWFIEQALIHSGVISEGGDSVMVFRVXXXXXXLQLEDFVVAFSMLDNVFRASKDVFKATGLLAVIIWVGCAALFYIFEENNPNWRSCDSSVPAHTEDPDFPGCYDFPSTSACNEVYDGLCEQKAFTNIPNALYFTAVFLGGEWGVIDFTWPGRFVCLFLCVAGIGLYAIPIGTLFDSFGAIL 1254          
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S063_THAOC)

HSP 1 Score: 206 bits (523), Expect = 1.380e-56
Identity = 121/282 (42.91%), Postives = 160/282 (56.74%), Query Frame = 1
Query:   43 TGVTEAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYF--DASAFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDN------------------------------------MCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVNEE 774
            T  +  G+L   FV+ LI+ NV+AVI ES P +    G   G     FD FEA+SV  F+ + ++RLF A  S    +S W Y  +FFG+VD+ SI PWYIE +L SSG     +A  FR       LQLE FV AFS LD+V+ ASK  L ATGL+AL++W+GS+ LF++FE DN                                    MC+   F+++P  +FY AVFLGGEW  +DFTW GK++C  LCV GI L+ IPVGT+F++F  V+  V EE
Sbjct:  924 TKASAVGRLL--FVS-LIVANVLAVILESIPEIDYIVGNERGNA---FDAFEAWSVFFFSLDYALRLFSAQKSRDALYSPWVYSQTFFGIVDLLSILPWYIEAVLASSGKLSGDEARVFRXXXXXXXLQLEDFVVAFSRLDNVYRASKGVLKATGLMALIIWIGSSALFFIFESDNPNFRECDGSVPLIGEGGSLGCYDFESTAACNAVYPGMCSQTVFTNMPSTLFYVAVFLGGEWGVVDFTWRGKIVCIFLCVAGIALYSIPVGTLFDSFGAVIGLVEEE 1199          
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Match: Hypothetical (protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GK10_CYCTE)

HSP 1 Score: 199 bits (507), Expect = 1.870e-55
Identity = 117/277 (42.24%), Postives = 159/277 (57.40%), Query Frame = 1
Query:   61 GKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVDVASIAPWYIETILWSSGVYFD--------ASAFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEKDN-------------------------------------MCTGDAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVM 756
            G +F   +  +I+LNV+AVIAES P +    G   G F   FD FE  SV+ F  E  +RLF AP +    +S + Y ++FFG+VD  S  P++IE  L    +YF+        A  FRV R+FR+LQLE F+ AFS LD+V+ AS D L ATGLLALV+WVG   LFY+FE++N                                     MC   AF++IP++++YTAVFLGGEW  +DFTW G+ +C  LCV GI L+ IP+GT+F++F  V+
Sbjct:  428 GYVFSISMFNIIVLNVLAVIAESIPEVDRAVGNQPGNF---FDVFELISVIFFATEYMLRLFCAPKNKAALYSSFIYATTFFGIVDFLSTVPYFIEHAL----IYFNVIQAGSDAAMMFRVFRIFRLLQLEGFIVAFSKLDNVFRASMDVLKATGLLALVIWVGCGSLFYIFEQNNPNFRSCDDSIPTHSTDSSTPGCFDFHTTEECNDVYPGMCKQVAFTNIPNSLYYTAVFLGGEWGLVDFTWPGRFVCLFLCVAGIGLYAIPLGTLFDSFGAVL 697          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9464.17497.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.210e-17596.00protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN88... [more]
Uncharacterized7.540e-7854.25protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Shal1.380e-7048.06protein n=1 Tax=Symbiodinium necroappetens TaxID=1... [more]
Hypothetical1.500e-6346.96protein n=1 Tax=Hemiselmis andersenii TaxID=464988... [more]
Hypothetical2.650e-6250.98protein n=1 Tax=Hemiselmis andersenii TaxID=464988... [more]
Hypothetical5.250e-5840.71protein n=1 Tax=Minutocellus polymorphus TaxID=265... [more]
Hypothetical8.460e-5841.32protein n=1 Tax=Attheya septentrionalis TaxID=4202... [more]
Hypothetical2.240e-5743.07protein n=1 Tax=Grammatophora oceanica TaxID=21045... [more]
Uncharacterized1.380e-5642.91protein n=1 Tax=Thalassiosira oceanica TaxID=15974... [more]
Hypothetical1.870e-5542.24protein n=1 Tax=Cyclophora tenuis TaxID=216820 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9464contigE_fasciculatus_S2_contig9464:3221..5805 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score519.6
Seed ortholog evalue8.7e-145
Seed eggNOG ortholog2880.D7FN88
Model size837
Hectar predicted targeting categorysignal peptide
Exons5
EggNOG free text desc.voltage-gated potassium channel activity
EggNOG OGsCOG2126@1,KOG1419@2759,KOG3713@2759
Ec32 ortholog descriptionIQ motif, EF-hand binding site
Ec32 orthologEc-15_003380.1
Cds size819
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9464.17497.1prot_E_fasciculatus_S2_contig9464.17497.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9464 3221..5787 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842594.68892-CDS-E_fasciculatus_S2_contig9464:3220..33371696842594.68892-CDS-E_fasciculatus_S2_contig9464:3220..3337Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9464 3221..3337 -
1696842594.702713-CDS-E_fasciculatus_S2_contig9464:4006..41681696842594.702713-CDS-E_fasciculatus_S2_contig9464:4006..4168Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9464 4007..4168 -
1696842594.7141292-CDS-E_fasciculatus_S2_contig9464:4484..47041696842594.7141292-CDS-E_fasciculatus_S2_contig9464:4484..4704Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9464 4485..4704 -
1696842594.7276037-CDS-E_fasciculatus_S2_contig9464:5145..52851696842594.7276037-CDS-E_fasciculatus_S2_contig9464:5145..5285Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9464 5146..5285 -
1696842594.7402208-CDS-E_fasciculatus_S2_contig9464:5607..57871696842594.7402208-CDS-E_fasciculatus_S2_contig9464:5607..5787Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9464 5608..5787 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842594.7510653-UTR-E_fasciculatus_S2_contig9464:5787..58051696842594.7510653-UTR-E_fasciculatus_S2_contig9464:5787..5805Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9464 5788..5805 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9464.17497.1

>prot_E_fasciculatus_S2_contig9464.17497.1 ID=prot_E_fasciculatus_S2_contig9464.17497.1|Name=mRNA_E_fasciculatus_S2_contig9464.17497.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=273bp
MRICYRFSTGVTEAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEG
RFQPFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWRYLSSFFGVVD
VASIAPWYIETILWSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVW
TASKDTLAATGLLALVVWVGSACLFYLFEKDNMCTGDAFSSIPDAMFYTA
VFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPVGTVFEAFQDVMQEVN
EEEEEDTAGHAGSAEETYGIQIG
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mRNA from alignment at E_fasciculatus_S2_contig9464:3221..5805-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9464.17497.1 ID=mRNA_E_fasciculatus_S2_contig9464.17497.1|Name=mRNA_E_fasciculatus_S2_contig9464.17497.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2585bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9464:3221..5805- (Ectocarpus fasciculatus EfasUO2)
CCCCCCCCCCCCCAGTCGATGAGGATCTGCTACCGGTTTTCCACGGGTGT GACCGAGGCCGGCAAGCTCTTCGACGGCTTCGTCGCGGTGCTCATCCTGC TCAACGTCGTTGCGGTCATCGCGGAGTCGGAGCCGTCCCTCGGGGGCACG GGCGGCCCATCGGAGGGGAGGTTCCAGCCATTCTTCGACGGCTTCGAGGT CAGTGTGCGCACAACGAACGCGGGAGGGTGGTCGCTTCTGGCTGGGAGGC CAAGCATGTGCCTGTACCGGTATGCGGTCGTTTCTAGCTCGCGGGGTCCC TGCGAGCGACTTTCTGGTCACGGTGGTGGTGGTGATCGGAGGTCGCATAT GGAAACGAGTCAGGCTGTATTTTCATCGTACTCGACGAACAATCTCCATC ACTTCCAAACTCTGGGCTTGTCCGGCAACTGGTGAACACTACAATAACAA GAGACGTTGTTATCCCAACACACCTGTGCCTCCGTTTTTTTGGCTGTTGC GCTTTCCTGCGCCGGAACAGGCTTTTTCGGTGCTGGTGTTCACGGCGGAG ATCTCGATGCGGCTGTTCATCGCGCCCATCTCGTCGAAATACGCCTTCAG CAGGTGGAGGTACCTCAGCTCCTTCTTCGGTGTCGTCGACGTGGCCTCCA TCGCTCCATGGTAGGCGGGGCGGGGCGTCTTCGAAATGAATTTTGCCCGA GGCCGTGTGCTTCTACTTTTGATGTCTTGGCTGTGCTGATGCGTGAGCGT TTTTGCCAGGCGACGTTTAGCGTTTTTGTTGGAAGACATCGCGGGGCTTG TCGGTTTGTATCGATTTGTTGCTTGCGACTGCGGGAAGTCGTTTGTTTGC CCTGGATTCCACGCAGTCACAACAAAAGCAACGGCGTTTTCATGCGAACG CGACGGTGACGGCGATGACGACGCCAACAACTACAGCAACAACACCTTCG ACCATCACGCGGTAGCTGCGCATTCGTCTTTTCACGTTCCATTCAGCAGT TCCGGCCCGTCTTATTCTTTTCGAAGGTTGTCTAACTGGTCTTCTCCCAA TTCCCGGGCGCTCGTCCCACGACCACCACGGAACGGCTTCCCATCCCACA GGTACATCGAGACGATTCTCTGGTCTTCCGGCGTCTACTTCGACGCCTCG GCCTTCCGGGTCCTCCGGCTCTTCCGGATCCTTCAGCTGGAGCACTTCGT TTCGGCCTTCTCCCTCCTCGACGACGTGTGGACGGCGTCCAAGGACACGC TGGCGGCCACGGGGCTGCTGGCCCTGGTGGTGTGGGTGGGCAGCGCCTGC CTCTTCTACCTTTTCGAGAAGGTAAGGTGCCCTGTCTGTCGGTGCTCTAC ACGGCTGGGACAGCAGTATCAAGCCGTTGATCCTGGGGTGTCTCCCCCTG TCTTGCCCGGCCCGTTGTGTTTGTTTTTTGGACTGCGTTCCGTGTGCTCT CGGGATCCCTCTCGTTTACCGCAGCTCTGCTGGACTCTCTTCTAGGTTGT GCACTCTCTCTTCGAACGCGTGTGAACATTTTTTTTTTGCCCAAAACGTG CTTCTATGTCAATCGAATGTGCTTCTGTATCCAAACGCGTTTCGCTGGCA ATGCTTTTTGCCCTTATTTTATTTTTTGTGTGTCCAGGACAACATGTGCA CCGGGGACGCTTTTAGCAGCATCCCCGACGCCATGTTCTACACAGCCGTT TTCCTCGGCGGAGAGTGGTCCGAGATCGACTTCACCTGGGCGGGCAAAGT TTTGTGCTGCGTGCTGTGCGTGTTCGGCATCGTCCTCTTTGGCATCCCGG TTCGTGAAAACTTCATTAGGTTGATTTTTCGTGATTACGCACACGAAGAA TTTGTTGTTGGTATGCAGGAGGCGGGCGAAGCGGGCGTTTGCAGTCGATT TTGTTCGTGAACACACACATTTGCAATTGGTTTTGGTGTGCAGGATGCTA TTAGGCAGCAGCATCGAATCGACGTGATGCCTTTCCTCAGTAGCTCTATG ATTTTTAGCCTGGGCAAGCCCGGTGTGTCTGCCCGAAGACTTTCGCCTCT CTTGAGTTGATTGAAGCCAACGCTTCCTGGACGGTTTCGCATGCTGCGAG AGCGTCTTGTGAGCGTGTCGCAGAACGTTGAGCGCGTCCGAACGCCTGGT GGTATCTATCCTGTACTCGTAATTTCCCGAGCCCGGGTCGACCGGTATAC ACCGCCAATGGTAAAAAAATATGAAAAAATTGCCCTGCTCTTGAGGGGCT GCCTCCAATCCGAGGTCCGCTTTCCTTTGATCCTTTCGAAGTTGAAGGGA TTGATGGAATGGAATTTGGTGTGTGACGGCGGGACGAAACGGCATTGTCA CGAACGAACGGATACACCGCGAATGACCAAGAATATGATGATTTAGATGA CAAGCAACAGGCTTGAGACTGTTAACGTGATAATGGTACCCCCCCACTTT CCCACCTGTTGTCTACAGGTCGGAACGGTCTTCGAGGCATTCCAGGACGT GATGCAGGAGGTCAACGAGGAGGAAGAGGAAGACACAGCTGGACATGCCG GGAGCGCGGAAGAAACGTACGGCATCCAGATCGGT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9464:3221..5805-

>mRNA_E_fasciculatus_S2_contig9464.17497.1 ID=mRNA_E_fasciculatus_S2_contig9464.17497.1|Name=mRNA_E_fasciculatus_S2_contig9464.17497.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=819bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9464:3221..5805- (Ectocarpus fasciculatus EfasUO2)
ATGAGGATCTGCTACCGGTTTTCCACGGGTGTGACCGAGGCCGGCAAGCT
CTTCGACGGCTTCGTCGCGGTGCTCATCCTGCTCAACGTCGTTGCGGTCA
TCGCGGAGTCGGAGCCGTCCCTCGGGGGCACGGGCGGCCCATCGGAGGGG
AGGTTCCAGCCATTCTTCGACGGCTTCGAGGCTTTTTCGGTGCTGGTGTT
CACGGCGGAGATCTCGATGCGGCTGTTCATCGCGCCCATCTCGTCGAAAT
ACGCCTTCAGCAGGTGGAGGTACCTCAGCTCCTTCTTCGGTGTCGTCGAC
GTGGCCTCCATCGCTCCATGGTACATCGAGACGATTCTCTGGTCTTCCGG
CGTCTACTTCGACGCCTCGGCCTTCCGGGTCCTCCGGCTCTTCCGGATCC
TTCAGCTGGAGCACTTCGTTTCGGCCTTCTCCCTCCTCGACGACGTGTGG
ACGGCGTCCAAGGACACGCTGGCGGCCACGGGGCTGCTGGCCCTGGTGGT
GTGGGTGGGCAGCGCCTGCCTCTTCTACCTTTTCGAGAAGGACAACATGT
GCACCGGGGACGCTTTTAGCAGCATCCCCGACGCCATGTTCTACACAGCC
GTTTTCCTCGGCGGAGAGTGGTCCGAGATCGACTTCACCTGGGCGGGCAA
AGTTTTGTGCTGCGTGCTGTGCGTGTTCGGCATCGTCCTCTTTGGCATCC
CGGTCGGAACGGTCTTCGAGGCATTCCAGGACGTGATGCAGGAGGTCAAC
GAGGAGGAAGAGGAAGACACAGCTGGACATGCCGGGAGCGCGGAAGAAAC
GTACGGCATCCAGATCGGT
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