mRNA_E_fasciculatus_S2_contig9462.17496.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9462.17496.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR3_ECTSI) HSP 1 Score: 383 bits (984), Expect = 1.140e-129 Identity = 185/218 (84.86%), Postives = 197/218 (90.37%), Query Frame = 1
Query: 1 LQDRTSRYISHLGKELVGMLFSAEGMAEILDLSLLKNRERDQLEEVFKSWRCDVPCNVTALRDARLRSFFGVRYDHRKNLVDWDYTNRLKQVASIIHHTQYRSWRLEGIAYEFGDQVYDKPNRTMVIE----LLRNRRESHKTAVRRGFWLDIRVGPFITFGIDCERPNQYAEELFNVLNKGTGTEQHRHNTAEVAVYSTISYLWGLETRGHYAMKKV 642
+QDRTSRYI+ LGKELVGMLFS E + +ILDLSLLKNRERDQLEEVFKSWRCDVPCNVTALRDARLR+FFGVRYDHRKNLVDWDYTNRLKQVASIIHHTQYRSWRLEGIAYEFGDQVYDKPNRTMV +++ K +R GFWLDIRVGPFITFG+DC+RPN +AEELFNVLNKGTGTEQHRHNTAEVAVYSTISYLWGLETRGHYAM KV
Sbjct: 105 VQDRTSRYIARLGKELVGMLFSTEDVPDILDLSLLKNRERDQLEEVFKSWRCDVPCNVTALRDARLRNFFGVRYDHRKNLVDWDYTNRLKQVASIIHHTQYRSWRLEGIAYEFGDQVYDKPNRTMVSYAEGMMVKGEHRGLKKEMR-GFWLDIRVGPFITFGVDCDRPNPFAEELFNVLNKGTGTEQHRHNTAEVAVYSTISYLWGLETRGHYAMTKV 321
BLAST of mRNA_E_fasciculatus_S2_contig9462.17496.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI43_9STRA) HSP 1 Score: 249 bits (636), Expect = 3.500e-77 Identity = 122/217 (56.22%), Postives = 159/217 (73.27%), Query Frame = 1
Query: 4 QDRTSRYISHLGKELVGMLFSAEG-MAEILDLSLLKNRERDQLEEVFKSWRCDVPCN-VTALRDARLRSFFGVRYDHRKNLVDWDYTNRLKQVASIIHHTQYRSWRLEGIAYEFGDQVYDKPNRTMVI---ELLRNRRESHKTAVRRGFWLDIRVGPFITFGIDCERPNQYAEELFNVLNKGTGTEQHRHNTAEVAVYSTISYLWGLETRGHYAMKK 639
++RT +Y++ L +ELV +L + +G MA ++D SLLK RE+D+LEEV SW + C+ V LRD RLR+FFG +YD R ++VDWDYT RLK VA +IH+ QYR WR GIA+EFGDQVYD+PN TM+ L+++ + RGFWLDIRVGPF+ FG+DC+RPN+ AE+LF V NKGTGTEQ+RHN AEVAVY+ +SY+W ET Y M K
Sbjct: 99 EERTCKYVARLARELVELLRAGKGPMAGLIDFSLLKYREKDELEEVLLSWYSETGCSDVAKLRDQRLRNFFGQQYDARHSVVDWDYTARLKDVAGVIHYKQYRKWRTNGIAFEFGDQVYDRPNLTMLSFAEGLVKSGEHRGRKKGVRGFWLDIRVGPFMPFGVDCDRPNKAAEDLFLVHNKGTGTEQYRHNFAEVAVYNLLSYMWEAETGTMYKMSK 315
BLAST of mRNA_E_fasciculatus_S2_contig9462.17496.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CK38_PYTIN) HSP 1 Score: 224 bits (571), Expect = 2.530e-69 Identity = 109/216 (50.46%), Postives = 152/216 (70.37%), Query Frame = 1
Query: 1 LQDRTSRYISHLGKELVGMLFSAEG-MAEILDLSLLKNRERDQLEEVFKSWRCDVPCNVTALRDARLRSFFGVRYDHRKNLVDWDYTNRLKQV--ASIIHHTQYRSWRLEGIAYEFGDQVYDKPNRTMVIELLRNRRESHKTAVRRGFWLDIRVGPFITFGIDCERPNQYAEELFNVLNKGTGTEQHRHNTAEVAVYSTISYLWGLETRGHYAMKK 639
+Q+RT+ YI KEL+ +L G +A+ +DLS LK + RD+L + +SW +V +V LRD RLR F+ VRYD+R NL+DWDYT LK+V AS+IH Q+R WR G+A+EFGDQVY+ PNR+M R++ H + + RG W DI VGP+++FG+DC+R N++AE+LF + NKGTG EQ+RHNT EVAVY+ +S L+ +ET Y M+K
Sbjct: 120 VQERTASYIEAKSKELMELLHYERGWLADQIDLSHLKMKTRDELVDTLRSWSTNVRFDVAKLRDHRLRHFYEVRYDYRDNLIDWDYTMNLKKVENASVIHIRQFRQWRNTGVAFEFGDQVYEAPNRSMAA-YTEARKKQHGSVLCRGLWTDIVVGPYVSFGVDCDRTNKFAEQLFEIHNKGTGVEQNRHNTTEVAVYNVLSSLYEIETGVKYEMRK 334
BLAST of mRNA_E_fasciculatus_S2_contig9462.17496.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VFP1_9STRA) HSP 1 Score: 224 bits (570), Expect = 2.600e-69 Identity = 109/217 (50.23%), Postives = 151/217 (69.59%), Query Frame = 1
Query: 1 LQDRTSRYISHLGKELVGMLFSAEG-MAEILDLSLLKNRERDQLEEVFKSWRCDVPCNVTALRDARLRSFFGVRYDHRKNLVDWDYTNRLKQV--ASIIHHTQYRSWRLEGIAYEFGDQVYDKPNRTMVIELLRNRRESHKTAVRRGFWLDIRVGPFITFGIDCERPNQYAEELFNVLNKGTGTEQHRHNTAEVAVYSTISYLWGLETRGHYAMKKV 642
+Q+RTS YI K L+ +++ G +A ++D+S LKNR D L + F+SW V +V +LRD RLR ++ VRYD+R NL+DWDYT +LK++ AS+IH QYR WR G+A+EFGDQVY PNRTM +++ H + + RG W DI VGP+I+FG+ CE+ N++ E LF V NKGTG EQ+RHNT EVAV++ +SYL+ +ET Y M+KV
Sbjct: 115 VQERTSTYIEEQAKVLMNFVYNDHGPLAGLVDISHLKNRTHDDLIDSFRSWFQSVKFDVDSLRDHRLRHYYEVRYDYRDNLIDWDYTMKLKKIESASVIHIRQYRDWRNSGVAFEFGDQVYSTPNRTMAA-YTEAKKKHHGSVLCRGLWTDIIVGPYISFGVHCEKSNKFVEGLFEVHNKGTGVEQNRHNTVEVAVFNVLSYLYEIETGKMYKMEKV 330
BLAST of mRNA_E_fasciculatus_S2_contig9462.17496.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBB7_PYTIN) HSP 1 Score: 226 bits (577), Expect = 2.020e-68 Identity = 109/216 (50.46%), Postives = 154/216 (71.30%), Query Frame = 1
Query: 1 LQDRTSRYISHLGKELVGMLFSAEG-MAEILDLSLLKNRERDQLEEVFKSWRCDVPCNVTALRDARLRSFFGVRYDHRKNLVDWDYTNRLKQV--ASIIHHTQYRSWRLEGIAYEFGDQVYDKPNRTMVIELLRNRRESHKTAVRRGFWLDIRVGPFITFGIDCERPNQYAEELFNVLNKGTGTEQHRHNTAEVAVYSTISYLWGLETRGHYAMKK 639
+Q+RT+ YI KEL+ +L+ G +A+ +DLS LK + RD+L + +SW +V +V LRD RLR F+ VRYD+R NL+DWDYT LK+V AS+IH Q+R WR G+A+EFGDQVY++PNR+M R++ H + + RG W DI VGP+++FG+DC+R N++AE+LF + NKGTG EQ+RHNT EVAVY+ +S L+ +ET Y M+K
Sbjct: 93 VQERTASYIETKSKELMELLYYERGWLADQIDLSHLKMKTRDELVDTLRSWSTNVRFDVAKLRDHRLRHFYEVRYDYRDNLIDWDYTMNLKKVENASVIHIRQFRQWRNTGVAFEFGDQVYEEPNRSMAA-YTEARKKQHGSVLCRGLWTDIVVGPYVSFGVDCDRTNKFAEQLFEIHNKGTGVEQNRHNTTEVAVYNVLSSLYEIETGVKYEMRK 307
BLAST of mRNA_E_fasciculatus_S2_contig9462.17496.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G2S5_9STRA) HSP 1 Score: 220 bits (560), Expect = 2.200e-67 Identity = 103/216 (47.69%), Postives = 147/216 (68.06%), Query Frame = 1
Query: 1 LQDRTSRYISHLGKELVGMLFSAEG-MAEILDLSLLKNRERDQLEEVFKSWRCDVPCNVTALRDARLRSFFGVRYDHRKNLVDWDYTNRLKQV--ASIIHHTQYRSWRLEGIAYEFGDQVYDKPNRTMVIELLRNRRESHKTAVRRGFWLDIRVGPFITFGIDCERPNQYAEELFNVLNKGTGTEQHRHNTAEVAVYSTISYLWGLETRGHYAMKK 639
+Q+RTS Y+ K L+ ++++ G +A ++D S LK R +D L + F+SW V +V LRD RLR ++ VRYD+R NL+DWDYT LK++ AS+IH QYR WR G+A+EFGDQ Y PNRTM +++ H + + RG W DI + P+I+FG+ CE+ NQ+AE+LF + NKGTG EQ+RHNT E+A+Y+ +SYL+ +ET Y M K
Sbjct: 129 VQERTSAYVEEQAKVLIDLIYNERGPLAGLIDFSRLKMRTQDDLIDTFRSWFQSVKFDVDTLRDHRLRHYYEVRYDYRDNLIDWDYTMNLKKIENASVIHVRQYREWRNSGVAFEFGDQTYAVPNRTMAA-YTEAKKKHHGSVLCRGMWTDIIISPYISFGVQCEKSNQFAEQLFEIHNKGTGVEQNRHNTVEIAIYNVLSYLYEIETGKMYKMDK 343
BLAST of mRNA_E_fasciculatus_S2_contig9462.17496.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NUW2_PHYIT) HSP 1 Score: 220 bits (560), Expect = 6.700e-67 Identity = 108/217 (49.77%), Postives = 148/217 (68.20%), Query Frame = 1
Query: 1 LQDRTSRYISHLGKELVGMLFSAEG-MAEILDLSLLKNRERDQLEEVFKSWRCDVPCNVTALRDARLRSFFGVRYDHRKNLVDWDYTNRLKQV--ASIIHHTQYRSWRLEGIAYEFGDQVYDKPNRTMVIELLRNRRESHKTAVRRGFWLDIRVGPFITFGIDCERPNQYAEELFNVLNKGTGTEQHRHNTAEVAVYSTISYLWGLETRGHYAMKKV 642
+Q+RTS YI K LV +++ G +A ++DLS LK R D L + F+SW V +V LRD RLR ++ VRYD+R NL+DWDYT +LK++ A +IH QYR WR G+A+EFGDQ+Y PNRTM + + HK+ + RG W DI V P+I+FG+ CE+PN++ E+LF + NKGTG EQ+RHNT EVAVY+ +SYL+ +ET Y M +V
Sbjct: 62 VQERTSAYIEDQAKLLVDFVYNDRGPLAGLIDLSHLKLRTHDDLIDSFQSWFQRVTFDVDTLRDHRLRHYYEVRYDYRDNLIDWDYTMKLKKIENADVIHIRQYRDWRNSGVAFEFGDQMYTVPNRTMAA-YTEAKNKHHKSVLCRGLWTDIIVSPYISFGVHCEKPNRFVEQLFEIHNKGTGVEQNRHNTVEVAVYNVLSYLYEIETGKRYQMGEV 277
BLAST of mRNA_E_fasciculatus_S2_contig9462.17496.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNW4_SAPPC) HSP 1 Score: 221 bits (563), Expect = 2.080e-66 Identity = 109/216 (50.46%), Postives = 149/216 (68.98%), Query Frame = 1
Query: 1 LQDRTSRYISHLGKELVGMLFSAEG-MAEILDLSLLKNRERDQLEEVFKSWRCDVPCNVTALRDARLRSFFGVRYDHRKNLVDWDYTNRLKQV--ASIIHHTQYRSWRLEGIAYEFGDQVYDKPNRTMVIELLRNRRESHKTAVRRGFWLDIRVGPFITFGIDCERPNQYAEELFNVLNKGTGTEQHRHNTAEVAVYSTISYLWGLETRGHYAMKK 639
LQ+RTS +I KELV ++ + G +A+++D+S LK ++RD L E F+SW VP ++ LRD RLR F+ RYD+R NL DWDYT LK++ AS+IH Q++ WR GIA+EFGDQ Y PNR+M +R H + + RGFWLDI VGP+I+FG+DC R N++A+ LF + NKG+G EQ+RHNTAEVAV++ +S L +ET Y M K
Sbjct: 119 LQERTSEFIEEKAKELVELVCNEHGRLADLVDVSHLKMKDRDALVETFQSWHTSVPFDIVKLRDHRLRHFYENRYDYRANLFDWDYTMSLKKIDQASVIHARQFKEWRNSGIAFEFGDQTYTSPNRSMASYTEATKR-GHGSVLCRGFWLDITVGPYISFGVDCFRSNKFADGLFEIYNKGSGCEQNRHNTAEVAVFNVLSCLHEIETGDIYKMAK 333
BLAST of mRNA_E_fasciculatus_S2_contig9462.17496.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z9W4_PHYSP) HSP 1 Score: 219 bits (559), Expect = 3.300e-66 Identity = 107/217 (49.31%), Postives = 147/217 (67.74%), Query Frame = 1
Query: 1 LQDRTSRYISHLGKELVGMLFSAEG-MAEILDLSLLKNRERDQLEEVFKSWRCDVPCNVTALRDARLRSFFGVRYDHRKNLVDWDYTNRLKQV--ASIIHHTQYRSWRLEGIAYEFGDQVYDKPNRTMVIELLRNRRESHKTAVRRGFWLDIRVGPFITFGIDCERPNQYAEELFNVLNKGTGTEQHRHNTAEVAVYSTISYLWGLETRGHYAMKKV 642
+Q+RTS YI K L+ +++ G A ++DLS LK R D L + F+SW V +V LRD RLR ++ VRYD+R NL+DWDYT LK++ AS+IH QYR WR G+A+EFGDQ Y PNRTM +++ H + + RG W DI V P+I+FG+ CE+PN++AE+LF + N GTG EQ+RHNT EVAVY+ +SYL+ +ET Y M+K+
Sbjct: 120 VQERTSAYIEEQAKLLMDFVYNDRGPFAGLVDLSHLKMRTHDDLIDTFRSWFQSVKFDVDTLRDHRLRHYYEVRYDYRDNLIDWDYTMNLKKIENASVIHIRQYRDWRNSGVAFEFGDQTYTVPNRTMAA-YTEAKKKRHGSVLCRGMWTDIIVSPYISFGVHCEKPNKFAEQLFEIHNMGTGVEQNRHNTVEVAVYNVLSYLYEIETGETYKMEKI 335
BLAST of mRNA_E_fasciculatus_S2_contig9462.17496.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W9D7_9STRA) HSP 1 Score: 218 bits (554), Expect = 2.650e-65 Identity = 106/214 (49.53%), Postives = 147/214 (68.69%), Query Frame = 1
Query: 1 LQDRTSRYISHLGKELVGMLFSAEG-MAEILDLSLLKNRERDQLEEVFKSWRCDVPCNVTALRDARLRSFFGVRYDHRKNLVDWDYTNRLKQVASIIHHTQYRSWRLEGIAYEFGDQVYDKPNRTMVIELLRNRRESHKTAVRRGFWLDIRVGPFITFGIDCERPNQYAEELFNVLNKGTGTEQHRHNTAEVAVYSTISYLWGLETRGHYAMKK 639
+Q+RTS+YI LG++LV + + EG + ++DLSLLK+R+ D LE++FKSW +V ++ LRD RLR+ RYD+R LVDWDY + +K ASIIH QYR WR G+A+EFGDQ Y NRTM + + K+ +RRGFW D+ VGP+ +FGI C++PNQ+A++LF + +KGT TEQHRH V+VY+ +SYL +ET Y M K
Sbjct: 112 VQERTSKYIGELGEKLVKFVCNDEGTLRRLVDLSLLKHRDADALEKIFKSWGDNVAFDMKTLRDDRLRALHKERYDNRVGLVDWDYQSGVKPTASIIHSQQYRKWRDTGVAFEFGDQTYTMSNRTMASYA--EGKANGKSQLRRGFWSDVVVGPYASFGISCDQPNQHAKDLFQIQSKGTATEQHRHTAVHVSVYNILSYLHEIETGKVYQMTK 323 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9462.17496.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9462.17496.1 >prot_E_fasciculatus_S2_contig9462.17496.1 ID=prot_E_fasciculatus_S2_contig9462.17496.1|Name=mRNA_E_fasciculatus_S2_contig9462.17496.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=214bp LQDRTSRYISHLGKELVGMLFSAEGMAEILDLSLLKNRERDQLEEVFKSWback to top mRNA from alignment at E_fasciculatus_S2_contig9462:2999..4488+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9462.17496.1 ID=mRNA_E_fasciculatus_S2_contig9462.17496.1|Name=mRNA_E_fasciculatus_S2_contig9462.17496.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1490bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9462:2999..4488+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9462:2999..4488+ >mRNA_E_fasciculatus_S2_contig9462.17496.1 ID=mRNA_E_fasciculatus_S2_contig9462.17496.1|Name=mRNA_E_fasciculatus_S2_contig9462.17496.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=642bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9462:2999..4488+ (Ectocarpus fasciculatus EfasUO2)back to top |