mRNA_E_fasciculatus_S2_contig9452.17489.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9452.17489.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI) HSP 1 Score: 220 bits (561), Expect = 3.060e-68 Identity = 106/131 (80.92%), Postives = 119/131 (90.84%), Query Frame = 1
Query: 1 MQSHRTLSRVSSVSTPRLILLFLALSLGAAATSVPFWTDTVVSGTGFWMRTEEEVAHEWIVVSGFFIEFFVGVCMLVIVVWLLIFRRTEIKECWKMHARIRYYFGLTLIATAVNLALGVCGTIYVVGDMKE 393
+ SHRTLSRV S STP LIL+FLALSLG AA SVPFWT+ VVSGT FW++T E+ AH+WIVV+GFF+EFFVG+CMLVIVVWL+IFRRTEIK+ WKMHARIRYYFGLTLIAT VNLALG+CGTIYVVGDMKE
Sbjct: 142 VMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGDMKE 272
BLAST of mRNA_E_fasciculatus_S2_contig9452.17489.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI) HSP 1 Score: 216 bits (550), Expect = 2.910e-66 Identity = 102/158 (64.56%), Postives = 126/158 (79.75%), Query Frame = 1
Query: 1 MQSHRTLSRVSSVSTPRLILLFLALSLGAAATSVPFWTDTVVSGTGFWMRTEEEVAHEWIVVSGFFIEFFVGVCMLVIVVWLLIFRRTEIKECWKMHARIRYYFGLTLIATAVNLALGVCGTIYVVGDMKEQLLPVITWAFRYVHVALDTIVLYGVLG 474
+ SHRTL+RV S S+P L+ L LA+S+ A + PFW TVVSGTGF +R E++ + +W+ VS FF+EF VG+CM VIV WLL+FR E+KECWK+HARIRYYFGLTLI T VNLALGVCGTIYVVG ++ LL V+TW FR++H+ALDT VLYGVLG
Sbjct: 44 IMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREKSLLIVLTWTFRHIHIALDTFVLYGVLG 201
BLAST of mRNA_E_fasciculatus_S2_contig9452.17489.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE) HSP 1 Score: 211 bits (538), Expect = 1.160e-64 Identity = 109/178 (61.24%), Postives = 131/178 (73.60%), Query Frame = 1
Query: 1 MQSHRTLSRVSSVSTPRLILLFLALSLGAAATSVPFWTDTVVSGTGFWMRTEEEVAHEWIVVSGFFIEFFVGVCMLVIVVWLLIFRRTEIKECWKMHARIRYYFGLTLIATAVNLALGVCGTIYVVGDMKEQLLPVITWAFRYVHVALDTIVLYGVLGTRSIDERATSLRSGASVSEG 534
+ SHRTLSRV+SVSTP L+LLFLA+S+ AAA SVPFW+ TVVSGT FW+ ++ +WI+VS +EF VG+CM +IV WL+ FR IKECWK+HARIRYYF LT+I TAVNLALG+ G YV + L +TWAFRY HVALDTIVLYGVLGTR +DE S S + S G
Sbjct: 51 VNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRANAGEYLLSLTWAFRYAHVALDTIVLYGVLGTRHMDEGGGSAASTSGTSSG 228
BLAST of mRNA_E_fasciculatus_S2_contig9452.17489.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI) HSP 1 Score: 207 bits (526), Expect = 2.070e-63 Identity = 102/166 (61.45%), Postives = 125/166 (75.30%), Query Frame = 1
Query: 1 MQSHRTLSRVSSVSTPRLILLFLALSLGAAATSVPFWTDTVVSGTGFWMRTEEEVAHEWIVVSGFFIEFFVGVCMLVIVVWLLIFRRTEIKECWKMHARIRYYFGLTLIATAVNLALGVCGTIYVVGDMKEQLLPVITWAFRYVHVALDTIVLYGVLGTRSIDERA 498
+ S R S V S+ST +L+LLFLALS G AA +VPFW TV+SGTGFW E + HE++++S F +EF VG+CM VIV WLL+FR TEIKECW MHA +RYYFGLTL+ T NL LGVCGTIYV+ DM LL + +W FR V +ALDTIVL+ VL T+S+DERA
Sbjct: 44 VMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMAWPLLMIFSWGFRQVRIALDTIVLHSVLATKSVDERA 209
BLAST of mRNA_E_fasciculatus_S2_contig9452.17489.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE) HSP 1 Score: 198 bits (504), Expect = 1.600e-59 Identity = 95/171 (55.56%), Postives = 124/171 (72.51%), Query Frame = 1
Query: 1 MQSHRTLSRVSSVSTPRLILLFLALSLGAAATSVPFWTDTVVSGTGFWMRTEEEVAHEWIVVSGFFIEFFVGVCMLVIVVWLLIFRRTEIKECWKMHARIRYYFGLTLIATAVNLALGVCGTIYVVGDMKEQLLPVITWAFRYVHVALDTIVLYGVLGTRSIDERATSLRS 513
+ SHRT++RV +VS+PR++ + L +S AA +VP W TVV GT FW + V +++I++S + IEF VG+CMLVIV WL +FR TEIKECW+ H+RIRYYF LTL TAVNL LG+CG YV GD KE L + +W FRY+H++ DT+VLYG L SIDERA + RS
Sbjct: 66 VSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIWSWLFRYIHISFDTLVLYGALREGSIDERAEADRS 236
BLAST of mRNA_E_fasciculatus_S2_contig9452.17489.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI) HSP 1 Score: 197 bits (502), Expect = 1.190e-58 Identity = 92/171 (53.80%), Postives = 127/171 (74.27%), Query Frame = 1
Query: 1 MQSHRTLSRVSSVSTPRLILLFLALSLGAAATSVPFWTDTVVSGTGFWMRTEEEVAHEWIVVSGFFIEFFVGVCMLVIVVWLLIFRRTEIKECWKMHARIRYYFGLTLIATAVNLALGVCGTIYVVGDMKEQLLPVITWAFRYVHVALDTIVLYGVLGTRSIDERATSLRS 513
+ SHRTL+RV SVS+P L+ L LA+S+G + +VP W V GTGFW+ ++ +++ +VVS FF+EF VG+CM VI+ WLL+FR E+KECW++ ARIRYYF LTL+ TAVN+ +G+C T++V+GDM E L + +W RY+HVALDT VLYGVL + +DER + RS
Sbjct: 116 VSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDEPRLAIWSWVSRYIHVALDTFVLYGVLREKDMDERGGNARS 286
BLAST of mRNA_E_fasciculatus_S2_contig9452.17489.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI) HSP 1 Score: 192 bits (489), Expect = 2.890e-57 Identity = 87/170 (51.18%), Postives = 124/170 (72.94%), Query Frame = 1
Query: 1 MQSHRTLSRVSSVSTPRLILLFLALSLGAAATSVPFWTDTVVSGTGFWMRTEEEVAHEWIVVSGFFIEFFVGVCMLVIVVWLLIFRRTEIKECWKMHARIRYYFGLTLIATAVNLALGVCGTIYVVGDMKEQLLPVITWAFRYVHVALDTIVLYGVLGTRSIDERATSLR 510
+ SHRTL RV SVS+P L+ L LA+S+G A +VP W +V GT FW+ ++ ++ +VVS FF+EF VG+CM VIV WLL+FR E+KECW++HARIRYY LT++ T ++L++G+C T++V+G +K+ L + W FRY+H+ALDT VLYGVL + +DER + R
Sbjct: 67 VSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDMDERVGNAR 236
BLAST of mRNA_E_fasciculatus_S2_contig9452.17489.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI) HSP 1 Score: 168 bits (426), Expect = 4.170e-49 Identity = 77/122 (63.11%), Postives = 99/122 (81.15%), Query Frame = 1
Query: 28 VSSVSTPRLILLFLALSLGAAATSVPFWTDTVVSGTGFWMRTEEEVAHEWIVVSGFFIEFFVGVCMLVIVVWLLIFRRTEIKECWKMHARIRYYFGLTLIATAVNLALGVCGTIYVVGDMKE 393
V+S+S+P LI++ L +S+GAAA + PFW ++SGTGF+ TE + +WI +S F++EFFVG+CM VIV WLL+FR TEIKECWKMHARIRYYFGLTLIAT VNL LG+CG IY++GD +E
Sbjct: 58 VNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFFPETENQRGSDWITISRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKMHARIRYYFGLTLIATGVNLILGICGVIYLIGDREE 179
BLAST of mRNA_E_fasciculatus_S2_contig9452.17489.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN7_ECTSI) HSP 1 Score: 167 bits (422), Expect = 2.730e-48 Identity = 79/149 (53.02%), Postives = 103/149 (69.13%), Query Frame = 1
Query: 67 LALSLGAAATSVPFWTDTVVSGTGFWMRTEEEVAHEWIVVSGFFIEFFVGVCMLVIVVWLLIFRRTEIKECWKMHARIRYYFGLTLIATAVNLALGVCGTIYVVGDMKEQLLPVITWAFRYVHVALDTIVLYGVLGTRSIDERATSLRS 513
L +S A +VP W TVV GT FW + ++++++S + EF VG+CMLVIV WL +FR E+KECWK+H RIRYYF LTL+ TAVNL LG+CG +V GD K+ LL + +W FRY+ ++ DT+VLYGVL SIDERA RS
Sbjct: 2 LLVSASLAVATVPLWETTVVLGTAFWFTNPDPAKYDFVIMSIYIFEFIVGICMLVIVSWLAMFRMKEMKECWKIHPRIRYYFCLTLLGTAVNLGLGICGAAFVKGDRKQPLLQIWSWLFRYIQISFDTLVLYGVLREGSIDERAEEDRS 150
BLAST of mRNA_E_fasciculatus_S2_contig9452.17489.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI) HSP 1 Score: 166 bits (420), Expect = 2.870e-48 Identity = 84/128 (65.62%), Postives = 99/128 (77.34%), Query Frame = 1
Query: 1 MQSHRTLSRVSSVSTPRLILLFLALSLGAAATSVPFWTDTVVSGTGFWMRTEEEVAHEWIVVSGFFIEFFVGVCMLVIVVWLLIFRRTEIKECWKMHARIRYYFGLTLIATAVNLALGVCGTIYVVGD 384
+ SHRTLSRV SVSTP L+LLFLA+S+ AAA SVPFW+ TVVSGT FW+ ++ +WI+VS +EF VG+CM VIV WL+ FR IKECWK+HARIRYYF LTLIATAVNLALG+ G YV D
Sbjct: 44 VNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYVFRD 171 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9452.17489.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9452.17489.1 >prot_E_fasciculatus_S2_contig9452.17489.1 ID=prot_E_fasciculatus_S2_contig9452.17489.1|Name=mRNA_E_fasciculatus_S2_contig9452.17489.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=247bp MQSHRTLSRVSSVSTPRLILLFLALSLGAAATSVPFWTDTVVSGTGFWMRback to top mRNA from alignment at E_fasciculatus_S2_contig9452:139..3671+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9452.17489.1 ID=mRNA_E_fasciculatus_S2_contig9452.17489.1|Name=mRNA_E_fasciculatus_S2_contig9452.17489.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3533bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9452:139..3671+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9452:139..3671+ >mRNA_E_fasciculatus_S2_contig9452.17489.1 ID=mRNA_E_fasciculatus_S2_contig9452.17489.1|Name=mRNA_E_fasciculatus_S2_contig9452.17489.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=741bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9452:139..3671+ (Ectocarpus fasciculatus EfasUO2)back to top |