mRNA_E_fasciculatus_S2_contig945.17484.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig945.17484.1
Unique NamemRNA_E_fasciculatus_S2_contig945.17484.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig945.17484.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU6_ECTSI)

HSP 1 Score: 1031 bits (2667), Expect = 0.000e+0
Identity = 572/639 (89.51%), Postives = 594/639 (92.96%), Query Frame = 1
Query:  193 MAPPLPKGRSVPVKKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQDNTPSRTPAGGSTVGTPVTGLRIHGEASRGDGLELRVNGGDSERPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADRPKIGDSRPNQVETWKHRTRNQLMFSPNLAASNDVCRIEQAPTEAAQLLLVKDRSPSSTATTKRRLIKQSEEVVKRVTRAAATSTQEYADGDCDSSESSRAAXVXXXXXXXXXXXX-PSSDEALTATPDQPHQGEREKQSTGPPKAGGSTQGTEMTEPLHCAPCLDSNKGVDGFGSSGSRTDEPPAPRRPAPPVSRGSVVIKANPKVIQAHATRFPAPAPRKPSRGPWASPIEKPSSSRESVAELLAGTADASGYEEVPMTPSRVPGVDGDSPQVTWGSIDGTPMILDPRATPLPEAGGGAMDVANFMETLGGVVGGVGQQQFEIKDLPARDKLAHRLEAVDTRRKRAKFGTSAAADGRGTHTPAPATPMTPQTPGTGRRXXXXXXXXXRGGRTPAKGKGKA----AAVTPAARSLAARLAQRQSAGTPFGGGLTPGRQRKRTNRSGGAAGANRG 2094
            MAPPLPKGRSVP+KKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQD TPSRTPAGGS VGTPVTGLR  G ++ GDGLELRV+GG+S+ PSSS  AGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADRPKIGDSRPNQV+TWKHRTRNQLMFSPNLAASND+CRIEQAPTEAAQLL VKD S S+TATTKRR+IKQSEEVVKRV RA ATST+E ADGDC SS+SS A X XXXXXXXXXXXX PSSDEALTATPDQPHQGE E QS+GPP AGGSTQ TEM EPLHC P +DSN+GVD FGSS SR DEPPAP RPAPPVSRG+VV+KANPKVIQAHATRFP PAPRKPSRGPWASPIEKPSSSRESVAELLAGTAD+SGYEEVPMTPSRVPGVDGDSPQ+TWGSIDGTPMILDPRATPLPEAG GAMDVA+FMETLGGVVGGVGQQQFEIKDLPARDKLAHRLEAVDTRRKRAK G  AAADGRGTHTPAPATPMTPQTPGTGRRXXXXXXXXXRGGRTPAKGKG      AAVTPAARSLAARLAQRQS  TPFGGGLTPGRQR+RT+RSGG AGANRG
Sbjct:    1 MAPPLPKGRSVPLKKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQDTTPSRTPAGGSMVGTPVTGLRSIGGSTDGDGLELRVSGGNSDGPSSSNCAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADRPKIGDSRPNQVKTWKHRTRNQLMFSPNLAASNDICRIEQAPTEAAQLL-VKDGSTSATATTKRRVIKQSEEVVKRVARATATSTKESADGDCHSSKSSGATXXXXXXXXXXXXXXXPSSDEALTATPDQPHQGEPEYQSSGPPNAGGSTQRTEMDEPLHCPPRVDSNEGVDDFGSSESRADEPPAPPRPAPPVSRGAVVVKANPKVIQAHATRFPVPAPRKPSRGPWASPIEKPSSSRESVAELLAGTADSSGYEEVPMTPSRVPGVDGDSPQITWGSIDGTPMILDPRATPLPEAGRGAMDVASFMETLGGVVGGVGQQQFEIKDLPARDKLAHRLEAVDTRRKRAKLGAGAAADGRGTHTPAPATPMTPQTPGTGRRXXXXXXXXXRGGRTPAKGKGXXXXXXAAVTPAARSLAARLAQRQSVDTPFGGGLTPGRQRRRTDRSGGGAGANRG 638          
BLAST of mRNA_E_fasciculatus_S2_contig945.17484.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YVG3_9STRA)

HSP 1 Score: 136 bits (342), Expect = 4.440e-31
Identity = 95/238 (39.92%), Postives = 129/238 (54.20%), Query Frame = 1
Query:  232 KKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQD----------------NTPSRTPAGGSTVGTPVTGLRIHGEASRGDGLELRVNGGDSERPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVETWKHRTRNQLMFSPNLAASNDVCRIEQAPTEAAQLLL 894
            +K VLEEEEYV+ LG+IIE D+FP+ +K+ +    L D  ++                NT  R+ A  S    P   L    E S G  L+   +  D  R S +        L +FV THTSEDNEAF ELQEK  +   RRY WA+D   D +G+     KL +L NG  +S E+R+  D ACA + PK  D RP+  +TWK+R RN L+F P+L  + ++C++E  P   AQLLL
Sbjct:    3 RKVVLEEEEYVEALGQIIERDFFPDLSKLKKQSELLRDEEENLPWTDTTLRVASMTRGNTSERSNASDSGWDEPTPTL----EQSTGSPLQDEDHAEDKSRASMT--------LNRFVTTHTSEDNEAFNELQEKTVKDHERRYHWAFD---DKKGD----PKLHLLTNGTWISKEQRQIADKACAPKGPK--DDRPSAPQTWKYRARNPLLFPPDLETTREICQVESGP--RAQLLL 217          
BLAST of mRNA_E_fasciculatus_S2_contig945.17484.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X327_9STRA)

HSP 1 Score: 134 bits (336), Expect = 2.910e-30
Identity = 95/228 (41.67%), Postives = 127/228 (55.70%), Query Frame = 1
Query:  232 KKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQDNTPSRTPAGGSTVGTPVTGLRIHGEASRGDGLEL------RVNGGDSERPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVETWKHRTRNQLMFSPNLAASNDVCRIEQAPTEAAQLLL 894
            KK VLEEEEYVD L +IIE D+FP+  K+ R    L D       + T    +T G     + +  +AS G G +       ++ G     P+  K   +   L +FVATHTSEDNE+F ELQEK  +   RRY WA+D   D +G+     KL +L NG  +S E+R   D ACA + PK  D RP+  ETWK+R RN L+F P L A+ D+C++E  P   +QLLL
Sbjct:    3 KKVVLEEEEYVDALDQIIERDFFPDLPKLKRQAELLRDEEDLPWTNTTLRAATTQGN----MSVRSDAS-GSGWDQPTPMAEQLTGSPVVEPAEDKSQASM-TLNRFVATHTSEDNESFNELQEKAVKDHERRYHWAFD---DKKGD----PKLHLLTNGTWISKEQRLLADKACAPKGPK--DDRPSAPETWKYRARNPLLFPPELEATRDICQVE--PGSKSQLLL 213          
BLAST of mRNA_E_fasciculatus_S2_contig945.17484.1 vs.
Match: Nuclear (protein ES2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A564_PLAHL)

HSP 1 Score: 131 bits (329), Expect = 2.840e-29
Identity = 99/246 (40.24%), Postives = 133/246 (54.07%), Query Frame = 1
Query:  232 KKTVLEEEEYVDRLGEIIEGDYFPNNAKMY--RALAGLADHG-----------QDNTPSRTPAGGSTVG----TPVTGLRIHGEASRGDGLELRVNGGDSERPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADRPKIGDSRPNQVETWKHRTRNQLMFSPNLAASNDVCRIEQAPTEAAQLLLVKDRSPSS 918
            KK VLEE+EYV+ LG IIE D+FP+  K+   R L  LAD G            D+T  R+ A  S VG    TP   L        GD +++     DS    +S        L +FVATHTSEDNE+F ELQEK     +R+Y WA+D     E  +   +KL +L NG  +S ++R+ +D ACA +  + D RP   ETW++R RN L+F P L A+ D+C+I+ A     QLLL KD +  S
Sbjct:    3 KKVVLEEDEYVETLGLIIERDFFPDLPKLQKQRRLL-LADEGTETALRAISTTSDDTSVRSNA--SVVGWDQPTPYAKLAA------GDRVQVED---DSNSVMASM------TLNRFVATHTSEDNESFKELQEKAVNDHQRKYHWAFD-----ENKDKGDSKLHLLANGTWISKDQRKLVDEACAPKG-LKDDRPGFPETWRYRARNPLIFQPELEATRDICQIKAA--SKGQLLLEKDPNSRS 222          
BLAST of mRNA_E_fasciculatus_S2_contig945.17484.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MY39_PHYIT)

HSP 1 Score: 129 bits (324), Expect = 8.590e-29
Identity = 89/220 (40.45%), Postives = 124/220 (56.36%), Query Frame = 1
Query:  232 KKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQDNTP-SRTPAGGSTVGTPVTGLRIHGEASRGDG-------LELRVNGGDSERPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVETWKHRTRNQLMFSPNLAASNDVCRIEQ 864
            KK VLEE+EYV+ LG+IIE D+FP+  K+ +    L D  ++  P + T    ++    V  +R +   S  D          L  +G DS + S +        L  FVATHTSEDNE+F ELQEK  +  +RRY WA+D   D +G+     KL +L NG  +S E+R+  DAACA + PK  D RP+  ETW +R RN L+F P L A+ D+C++ Q
Sbjct:    3 KKVVLEEDEYVEALGQIIERDFFPDLPKLKKQTELLRD--EEGLPWTDTTLRAASTSRGVVSVRSNANESGWDQPTPMVEQYALDEDGHDSTKASMT--------LNHFVATHTSEDNESFNELQEKAVKDHQRRYHWAFDDDKD-KGD----PKLHLLTNGTWISKEQRQIADAACAPKGPK--DDRPSAPETWTYRARNPLLFPPELDATRDICQVGQ 205          
BLAST of mRNA_E_fasciculatus_S2_contig945.17484.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XTQ1_9STRA)

HSP 1 Score: 134 bits (337), Expect = 8.810e-29
Identity = 89/209 (42.58%), Postives = 118/209 (56.46%), Query Frame = 1
Query:  235 KTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQDNTPSRTPAGGSTVGTPVTGLRIHGEASRGDGL-ELRVNGGDSERPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVETWKHRTRNQLMFSPNLAASNDVCR 855
            K VLEEEEYV+ LGEIIE D+FP+   + R  A L+   Q + P+R P                  A+R + L   R    D E+ +   +      L++FVATHTSEDNEAF ELQEK  E  +RRY WA+D    G+G+     KL +L +G  +S ++R   D ACA + PK  D RP+  ETWK R RN L+F P+LA + D+CR
Sbjct:    5 KVVLEEEEYVEALGEIIERDFFPDLPSLKRQTAVLSSWDQPS-PAREPT-----------------ANRANALVRNRTRSEDDEKSAVESEGVQNMTLSRFVATHTSEDNEAFNELQEKAIEDHQRRYHWAFDDN-SGKGD----PKLHLLTDGTWISKQQRHLADEACAPKGPK--DDRPSAPETWKFRARNPLLFPPDLATTRDICR 188          
BLAST of mRNA_E_fasciculatus_S2_contig945.17484.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZJ0_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.180e-28
Identity = 87/209 (41.63%), Postives = 115/209 (55.02%), Query Frame = 1
Query:  235 KTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQDNTPSRTPAGGSTVGTPVTGLRIHGEASRGDGLELRVNGGDSERPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVETWKHRTRNQLMFSPNLAASNDVCRI 858
            K VLEEEEYV+ LGEIIE D+FP+   + R  A  +   Q + P+R P    T                   +  R    D E+ +   +      L +FVATHTSEDNEAF ELQEK  E  +RRY WA+D   DG+G+     KL +L +G  +S ++R   D ACA + PK  D RP+  ETWK R RN L+F P+LA + D+CR+
Sbjct:  444 KVVLEEEEYVEALGEIIERDFFPDLPSLKRQTAVPSGWDQPS-PAREPTASGTNAL----------------VRSRTRNEDDEKSAVESEGVQNMTLNRFVATHTSEDNEAFNELQEKAIEDHQRRYHWAFDDN-DGKGD----PKLHLLTDGTWISKQQRHLADEACAPKGPK--DDRPSAPETWKFRARNPLLFPPDLATARDICRL 628          
BLAST of mRNA_E_fasciculatus_S2_contig945.17484.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SZM5_9STRA)

HSP 1 Score: 132 bits (332), Expect = 4.850e-28
Identity = 93/239 (38.91%), Postives = 126/239 (52.72%), Query Frame = 1
Query:  232 KKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGLADHGQDNTPSRTPAGGSTVGTPVTGLRIHGEASRGDGLELRVNGGDS---------ERPSSSKDAGNGG--------ALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVETWKHRTRNQLMFSPNLAASNDVCRIEQAPTEAAQLLL 894
            KK VLEEEEYV+ LG+IIE D+FP+  K+ +    L D  +              G P T   +H  ++      +R     S         E+P+  +    G          L +FVATHTSEDNE+F ELQEK  +  +RRY WA+D   D E  +    KL +L NG  +S E+R+  D ACA + PK  D RP+  ETWK+R RN L+F P L A+ D+C+++  P   AQLLL
Sbjct:    3 KKVVLEEEEYVEALGQIIERDFFPDIPKLKKQTELLRDEEE--------------GLPWTDTTLHAASTSRGNASVRSGASGSGWDQPTPIVEQPAIDQAQDEGADDNAKASMTLNRFVATHTSEDNESFNELQEKAVKDHQRRYHWAFDN--DKEKGDP---KLHLLTNGTWISKEQRQIADDACAPKGPK--DDRPSAPETWKYRARNPLLFPPELEATRDICQVKADP--GAQLLL 218          
BLAST of mRNA_E_fasciculatus_S2_contig945.17484.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YIQ7_PHYSP)

HSP 1 Score: 126 bits (317), Expect = 8.810e-28
Identity = 97/247 (39.27%), Postives = 121/247 (48.99%), Query Frame = 1
Query:  232 KKTVLEEEEYVDRLGEIIEGDYFPNNAKMYRALAGL---------------ADHGQDNTPSRTPAGGS--TVGTPVTGLRIHGEASRGDGLELRVNGGDSERPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVETWKHRTRNQLMFSPNLAASNDVCRIEQAPTEAAQLLL---VKDRS 909
            KK VLEEEEYVD LG+IIE D+FP+  K+ R    L               A + + N   R+ A G+     TP +G          D  E               DA     L  FVATHTSEDNE+FAELQEK     +RRY WA+D     +       KL +L NG  +S E+R   D ACA + PK  D RP+  ETW+ R RN L+F P L A+ D+C++        QLLL   VK RS
Sbjct:    3 KKVVLEEEEYVDALGQIIERDFFPDLPKLKRQTELLREEEGGVPWTDTTLRAANTRGNASVRSSASGTGWDQPTPQSGESAVDATQESDAAEA--------------DAKASMTLNHFVATHTSEDNESFAELQEKAVIDHQRRYHWAFD-----DDKKRGDPKLHLLTNGTWISKEQRRIADEACAPKGPK--DDRPSAPETWRFRARNPLLFPPELEATRDICQVRSGN----QLLLENGVKSRS 224          
BLAST of mRNA_E_fasciculatus_S2_contig945.17484.1 vs.
Match: Uncharacterized (protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FV49_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.740e-27
Identity = 99/254 (38.98%), Postives = 127/254 (50.00%), Query Frame = 1
Query:  232 KKTVLEEEEYVDRLGEIIEGDYFPNNAKMYR--------------ALAGLADHGQDNTPSRTPAGGSTVGTPVTGLRIHGEASRGDGLELRVNGG----DSERPSSSK---DAGNGGA-----------LTKFVATHTSEDNEAFAELQEKDQEAFRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADR-PKIGDSRPNQVETWKHRTRNQLMFSPNLAASNDVCRIEQAPTEAAQLLL 894
            KK VLEEEEYV+ LG+IIE D+FP+  K+ +              AL  LA     +   R   G      P T   +    +RG+   +R +G     D   P S +   DA +  A           L  FVATHTSEDNE+F ELQ+K  +  +RRY WAYD     +       KL +L NG  +S E+R   D ACA + PK  D RP+  ETWK R RN L+F P L A+ D+CR+E  P    QLLL
Sbjct:    3 KKVVLEEEEYVEALGQIIERDFFPDLPKLKQQTEVRSIIDSACINALKSLALIASFSCCERRRGG-----IPWTDTTLQAANARGN-FSVRSSGSGTGWDHPTPQSDQSVADANHDNAAAEAEAKASMTLNHFVATHTSEDNESFVELQQKAVKDHQRRYHWAYD-----DDKERGDPKLHLLTNGTWISKEQRRIADQACAPKGPK--DDRPSAPETWKFRARNPLLFPPELEATRDICRVE--PGSGNQLLL 241          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig945.17484.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized0.000e+089.51protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU6... [more]
Uncharacterized4.440e-3139.92protein n=2 Tax=Phytophthora palmivora var. palmiv... [more]
Uncharacterized2.910e-3041.67protein n=1 Tax=Phytophthora megakarya TaxID=4795 ... [more]
Nuclear2.840e-2940.24protein ES2 n=1 Tax=Plasmopara halstedii TaxID=478... [more]
Uncharacterized8.590e-2940.45protein n=1 Tax=Phytophthora infestans (strain T30... [more]
Uncharacterized8.810e-2942.58protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID... [more]
Uncharacterized1.180e-2841.63protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID... [more]
Uncharacterized4.850e-2838.91protein n=1 Tax=Phytophthora cactorum TaxID=29920 ... [more]
Uncharacterized8.810e-2839.27protein (Fragment) n=1 Tax=Phytophthora sojae (str... [more]
Uncharacterized1.740e-2738.98protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig945contigE_fasciculatus_S2_contig945:11911..14837 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1050.8
Seed ortholog evalue2.9e-304
Seed eggNOG ortholog2880.D8LRU6
Model size2199
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.Nuclear protein Es2
EggNOG OGs2E6IQ@1,2SD85@2759
Ec32 ortholog descriptionNuclear protein DGCR14
Ec32 orthologEc-08_002490.1
Cds size2199
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842593.3291593-CDS-E_fasciculatus_S2_contig945:11910..124921696842593.3291593-CDS-E_fasciculatus_S2_contig945:11910..12492Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig945 11911..12492 +
1696842593.3417056-CDS-E_fasciculatus_S2_contig945:12818..130131696842593.3417056-CDS-E_fasciculatus_S2_contig945:12818..13013Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig945 12819..13013 +
1696842593.3564796-CDS-E_fasciculatus_S2_contig945:13415..148371696842593.3564796-CDS-E_fasciculatus_S2_contig945:13415..14837Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig945 13416..14837 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig945.17484.1prot_E_fasciculatus_S2_contig945.17484.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig945 11911..14837 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig945.17484.1

>prot_E_fasciculatus_S2_contig945.17484.1 ID=prot_E_fasciculatus_S2_contig945.17484.1|Name=mRNA_E_fasciculatus_S2_contig945.17484.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=733bp
MTTNTSGDGARPKMITADGSKFEMATPSTLARLEDPRAWHARGEVGIQRP
RPRAGSGRGAVALPMAPPLPKGRSVPVKKTVLEEEEYVDRLGEIIEGDYF
PNNAKMYRALAGLADHGQDNTPSRTPAGGSTVGTPVTGLRIHGEASRGDG
LELRVNGGDSERPSSSKDAGNGGALTKFVATHTSEDNEAFAELQEKDQEA
FRRRYFWAYDTTPDGEGNNATSTKLLILPNGKMMSVERREQMDAACADRP
KIGDSRPNQVETWKHRTRNQLMFSPNLAASNDVCRIEQAPTEAAQLLLVK
DRSPSSTATTKRRLIKQSEEVVKRVTRAAATSTQEYADGDCDSSESSRAA
AVTVAATEGGCSSSPSSDEALTATPDQPHQGEREKQSTGPPKAGGSTQGT
EMTEPLHCAPCLDSNKGVDGFGSSGSRTDEPPAPRRPAPPVSRGSVVIKA
NPKVIQAHATRFPAPAPRKPSRGPWASPIEKPSSSRESVAELLAGTADAS
GYEEVPMTPSRVPGVDGDSPQVTWGSIDGTPMILDPRATPLPEAGGGAMD
VANFMETLGGVVGGVGQQQFEIKDLPARDKLAHRLEAVDTRRKRAKFGTS
AAADGRGTHTPAPATPMTPQTPGTGRRTPGTEKRTPRGGRTPAKGKGKAA
AVTPAARSLAARLAQRQSAGTPFGGGLTPGRQRKRTNRSGGAAGANRGGL
TPLPASPAPAKGKSGTAEGTISSLTDGLLTLK*
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mRNA from alignment at E_fasciculatus_S2_contig945:11911..14837+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig945.17484.1 ID=mRNA_E_fasciculatus_S2_contig945.17484.1|Name=mRNA_E_fasciculatus_S2_contig945.17484.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2927bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig945:11911..14837+ (Ectocarpus fasciculatus EfasUO2)
ATGACCACCAACACGTCCGGGGACGGGGCGCGGCCAAAGATGATCACTGC GGATGGGAGTAAATTCGAAATGGCAACGCCAAGCACTCTTGCGCGGTTGG AGGATCCACGGGCATGGCACGCACGCGGAGAGGTGGGAATACAACGCCCG AGACCACGTGCCGGGAGCGGGCGGGGGGCAGTCGCCCTCCCCATGGCCCC ACCACTACCAAAAGGGCGATCGGTTCCTGTGAAAAAGACGGTCCTTGAGG AGGAAGAGTACGTGGACCGCCTGGGAGAGATTATTGAGGGGGACTACTTC CCCAACAACGCCAAGATGTATCGAGCCCTCGCTGGGCTTGCCGACCATGG CCAAGACAACACACCTTCCCGGACACCGGCGGGTGGCTCGACGGTAGGCA CCCCTGTGACTGGGCTACGGATTCATGGCGAGGCTTCTCGTGGGGATGGC CTGGAGCTTCGAGTGAACGGGGGCGATTCGGAGAGACCATCGTCCTCGAA AGACGCGGGAAACGGCGGCGCCCTTACCAAGTTCGTTGCGACACATACGT CCGAGGACAACGAAGCCTTCGCCGAGCTACAGGTAAGGAAAAGGGCGGCA GTAGTTTTAGTCTGGCCATCTCCTTCCAAAAATGCTCCAATGTAGCCAAT TCATGGTTGTCATGGGTTGGTTTCAGTCTTGTGATGGCACGGGTCTTCGT GTCCTCGCTGGCGTTGGTGGAGTTTTGGATCCCTCTGCTGCTTCAACAGC ACCGACTAATTTTTTAGCTCGTGCGCCGTGAGACGGCGAGAGCTTCAGCA GTACTCTACAGTGCACATTCTTCCCAGCAGTACTCTACAGGGCACCTGCT TCCCAGCAATGCCGCCTGTTTACCTTACTCAATCGCCCTGATTCGCGTTC GATTTCAGGAGAAAGACCAGGAGGCTTTTCGGAGGCGCTATTTCTGGGCT TACGATACCACACCAGACGGGGAGGGCAACAACGCCACGTCTACCAAGCT GTTGATACTCCCCAACGGCAAGATGATGTCCGTGGAGCGACGGGAGCAAA TGGACGCAGCTTGCGCAGATCGTCCAAAAATAGGAGATTCACGACCAAAT CAGGTGAGACGTCGCAGACTCGAGTGCAGAACACATCAGCGTGGCGCGTA GTGGTGACAATTGGAAGGGTGCTACCGCCTCGTGCTTTTCCTAACCCCAA ACATGCCAGGCTTTGTTTAGGAATCACCACATCGGTTCACGTGTTGATGC CCTTTAGCCAGTCCTGTCACTTAAGATACCTTCGCGCTGTTAAACTTAAA GGATCTCTGTACGGGATTTCTCCCGCCATTGTTGTTGAACGACATACCTC GTTGTTGTGGGATCACAGCAATCGCTGCATTCAGCCGACGGTATCACGGC CATTGCTGCAGCATCGCTTCCGTATACGTAGAACGTAGAACAGATGTTTA CCCCCACGCAGTTTTGAACAAGTTGCGTTTCACCTCTTGTCGTGCCTTGC TGCAGGTGGAGACTTGGAAACACAGGACACGAAACCAGCTTATGTTTTCT CCGAACCTGGCAGCGTCGAACGACGTTTGCAGAATCGAGCAAGCACCTAC TGAGGCTGCTCAGCTTCTTCTTGTGAAGGACAGGTCGCCATCCTCGACGG CAACAACGAAGCGAAGACTAATCAAGCAATCGGAAGAGGTCGTGAAGAGG GTGACGCGGGCTGCAGCAACATCTACCCAAGAATATGCAGATGGTGACTG TGATTCTTCAGAGTCGTCCCGGGCAGCCGCAGTAACAGTAGCGGCTACTG AAGGAGGTTGTTCTTCCTCGCCCTCTAGCGATGAAGCTCTCACCGCGACT CCAGACCAACCGCACCAGGGCGAACGTGAAAAACAATCTACAGGGCCACC GAAAGCAGGAGGATCGACACAGGGGACCGAAATGACCGAACCTTTACATT GCGCTCCTTGCTTAGACTCGAACAAAGGCGTTGACGGTTTTGGATCATCG GGATCACGGACCGATGAGCCGCCCGCACCACGACGACCAGCACCACCAGT TTCACGCGGTTCGGTAGTTATCAAAGCGAACCCCAAGGTTATTCAGGCCC ATGCGACGAGGTTCCCGGCCCCCGCGCCACGGAAACCAAGCCGAGGTCCT TGGGCATCCCCAATTGAGAAGCCGTCGTCGTCGCGGGAATCCGTTGCGGA GCTATTGGCGGGGACAGCGGACGCGTCGGGTTACGAGGAAGTACCTATGA CGCCTTCGAGGGTACCGGGTGTGGATGGAGACTCTCCGCAGGTCACTTGG GGTTCCATCGATGGCACGCCCATGATCCTCGACCCGCGTGCCACCCCTCT TCCAGAGGCCGGCGGGGGGGCCATGGACGTGGCGAACTTCATGGAGACAC TCGGAGGCGTCGTTGGCGGGGTTGGCCAACAGCAATTCGAGATTAAGGAT CTCCCTGCGCGAGACAAGCTCGCACACCGCCTCGAGGCCGTAGACACTCG CCGGAAGCGAGCGAAGTTTGGGACCAGCGCGGCCGCAGACGGAAGGGGGA CTCACACGCCCGCGCCGGCAACACCGATGACCCCTCAAACGCCCGGCACA GGACGACGAACCCCCGGGACGGAGAAACGAACGCCCAGGGGTGGGAGGAC ACCCGCGAAGGGAAAGGGAAAGGCTGCGGCCGTGACGCCCGCCGCTCGAA GCCTGGCGGCGAGGCTAGCTCAGCGGCAGAGCGCCGGCACACCGTTCGGC GGTGGGCTCACTCCCGGGCGGCAAAGAAAGCGAACGAACCGTTCGGGGGG GGCGGCTGGTGCCAACCGAGGTGGGCTAACACCTCTGCCGGCTTCGCCTG CCCCGGCAAAGGGGAAGTCGGGCACGGCTGAAGGCACAATATCGTCGCTT ACTGATGGTCTGTTGACCTTGAAGTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig945:11911..14837+

>mRNA_E_fasciculatus_S2_contig945.17484.1 ID=mRNA_E_fasciculatus_S2_contig945.17484.1|Name=mRNA_E_fasciculatus_S2_contig945.17484.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2199bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig945:11911..14837+ (Ectocarpus fasciculatus EfasUO2)
ATGACCACCAACACGTCCGGGGACGGGGCGCGGCCAAAGATGATCACTGC
GGATGGGAGTAAATTCGAAATGGCAACGCCAAGCACTCTTGCGCGGTTGG
AGGATCCACGGGCATGGCACGCACGCGGAGAGGTGGGAATACAACGCCCG
AGACCACGTGCCGGGAGCGGGCGGGGGGCAGTCGCCCTCCCCATGGCCCC
ACCACTACCAAAAGGGCGATCGGTTCCTGTGAAAAAGACGGTCCTTGAGG
AGGAAGAGTACGTGGACCGCCTGGGAGAGATTATTGAGGGGGACTACTTC
CCCAACAACGCCAAGATGTATCGAGCCCTCGCTGGGCTTGCCGACCATGG
CCAAGACAACACACCTTCCCGGACACCGGCGGGTGGCTCGACGGTAGGCA
CCCCTGTGACTGGGCTACGGATTCATGGCGAGGCTTCTCGTGGGGATGGC
CTGGAGCTTCGAGTGAACGGGGGCGATTCGGAGAGACCATCGTCCTCGAA
AGACGCGGGAAACGGCGGCGCCCTTACCAAGTTCGTTGCGACACATACGT
CCGAGGACAACGAAGCCTTCGCCGAGCTACAGGAGAAAGACCAGGAGGCT
TTTCGGAGGCGCTATTTCTGGGCTTACGATACCACACCAGACGGGGAGGG
CAACAACGCCACGTCTACCAAGCTGTTGATACTCCCCAACGGCAAGATGA
TGTCCGTGGAGCGACGGGAGCAAATGGACGCAGCTTGCGCAGATCGTCCA
AAAATAGGAGATTCACGACCAAATCAGGTGGAGACTTGGAAACACAGGAC
ACGAAACCAGCTTATGTTTTCTCCGAACCTGGCAGCGTCGAACGACGTTT
GCAGAATCGAGCAAGCACCTACTGAGGCTGCTCAGCTTCTTCTTGTGAAG
GACAGGTCGCCATCCTCGACGGCAACAACGAAGCGAAGACTAATCAAGCA
ATCGGAAGAGGTCGTGAAGAGGGTGACGCGGGCTGCAGCAACATCTACCC
AAGAATATGCAGATGGTGACTGTGATTCTTCAGAGTCGTCCCGGGCAGCC
GCAGTAACAGTAGCGGCTACTGAAGGAGGTTGTTCTTCCTCGCCCTCTAG
CGATGAAGCTCTCACCGCGACTCCAGACCAACCGCACCAGGGCGAACGTG
AAAAACAATCTACAGGGCCACCGAAAGCAGGAGGATCGACACAGGGGACC
GAAATGACCGAACCTTTACATTGCGCTCCTTGCTTAGACTCGAACAAAGG
CGTTGACGGTTTTGGATCATCGGGATCACGGACCGATGAGCCGCCCGCAC
CACGACGACCAGCACCACCAGTTTCACGCGGTTCGGTAGTTATCAAAGCG
AACCCCAAGGTTATTCAGGCCCATGCGACGAGGTTCCCGGCCCCCGCGCC
ACGGAAACCAAGCCGAGGTCCTTGGGCATCCCCAATTGAGAAGCCGTCGT
CGTCGCGGGAATCCGTTGCGGAGCTATTGGCGGGGACAGCGGACGCGTCG
GGTTACGAGGAAGTACCTATGACGCCTTCGAGGGTACCGGGTGTGGATGG
AGACTCTCCGCAGGTCACTTGGGGTTCCATCGATGGCACGCCCATGATCC
TCGACCCGCGTGCCACCCCTCTTCCAGAGGCCGGCGGGGGGGCCATGGAC
GTGGCGAACTTCATGGAGACACTCGGAGGCGTCGTTGGCGGGGTTGGCCA
ACAGCAATTCGAGATTAAGGATCTCCCTGCGCGAGACAAGCTCGCACACC
GCCTCGAGGCCGTAGACACTCGCCGGAAGCGAGCGAAGTTTGGGACCAGC
GCGGCCGCAGACGGAAGGGGGACTCACACGCCCGCGCCGGCAACACCGAT
GACCCCTCAAACGCCCGGCACAGGACGACGAACCCCCGGGACGGAGAAAC
GAACGCCCAGGGGTGGGAGGACACCCGCGAAGGGAAAGGGAAAGGCTGCG
GCCGTGACGCCCGCCGCTCGAAGCCTGGCGGCGAGGCTAGCTCAGCGGCA
GAGCGCCGGCACACCGTTCGGCGGTGGGCTCACTCCCGGGCGGCAAAGAA
AGCGAACGAACCGTTCGGGGGGGGCGGCTGGTGCCAACCGAGGTGGGCTA
ACACCTCTGCCGGCTTCGCCTGCCCCGGCAAAGGGGAAGTCGGGCACGGC
TGAAGGCACAATATCGTCGCTTACTGATGGTCTGTTGACCTTGAAGTGA
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