mRNA_E_fasciculatus_S2_contig9449.17481.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9449.17481.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTI6_9PHAE) HSP 1 Score: 261 bits (666), Expect = 9.990e-84 Identity = 137/150 (91.33%), Postives = 143/150 (95.33%), Query Frame = 1
Query: 1 LYSVVAWTGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMQMAVGDGMADLVGRQFGKHKWRKGGEKSVEGSAAFVSGSFVASVAMIQWFNHFGLLSVTPAEAAARAAAISFASAAVELFPPRLVGDDNISVPVTALILGRLLFRK 450
L ++ +G+ASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMQMAVGDGMADLVGRQ GKHKWRKGGEKSVEGSAAFVSGSF+ASVAMIQWF HFGLLSVTP EAAARAAAISFASAAVELFPPRLVGDDNISVPVTAL+LGRLLFRK
Sbjct: 221 LVKAISRSGKASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMQMAVGDGMADLVGRQLGKHKWRKGGEKSVEGSAAFVSGSFLASVAMIQWFRHFGLLSVTPTEAAARAAAISFASAAVELFPPRLVGDDNISVPVTALVLGRLLFRK 370
BLAST of mRNA_E_fasciculatus_S2_contig9449.17481.1 vs.
Match: Phosphatidate (cytidylyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNW7_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.460e-31 Identity = 72/143 (50.35%), Postives = 91/143 (63.64%), Query Frame = 1
Query: 1 LYSVVAWTGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMQMAVGDGMADLVGRQFGKHKWRKGGEKSVEGSAAFVSGSFVASVAMIQWFNHFGLLSVTPAEAAARAAAISFASAAVELFPPRLVGDDNISVPVTALIL 429
L + ++ +G +E L GPL Y + ++L TVV WR SVVGL+A+ QMA GDGMAD+VGR++G KW KS GS+AF FV SVA+I WFN +GL+ A A + A IS AAVEL P GDDNI VP+ A L
Sbjct: 200 LVAAISRSGNPAEVLRGPLIYVVILLLATVVFWRESVVGLVAVAQMAAGDGMADIVGRRWGAQKWSFSSTKSYAGSSAFALSGFVVSVALIAWFNFWGLVPALTAGVACKVALISILCAAVELVP---WGDDNIFVPMVASAL 339
BLAST of mRNA_E_fasciculatus_S2_contig9449.17481.1 vs.
Match: Putative (phytol kinase, chloroplast, carboxyterminal half n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6B9_9STRA) HSP 1 Score: 120 bits (301), Expect = 5.400e-30 Identity = 70/148 (47.30%), Postives = 93/148 (62.84%), Query Frame = 1
Query: 1 LYSVVAWTGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMQMAVGDGMADLVGRQFGKHKWRKGGEKSVEGSAAFVSGSFVASVAMIQWFNHFGLLSVTPAEAAARAAAISFASAAVELFPPRLVGDDNISVPVTALILGRLLF 444
L VV+ +G ASE + GPL Y L + + T++EWR S+VG++A+ QMA GDG+ADLVGR KW KS GS AFV+G FV S+A++ W + G ++V+ AA R IS A VE V DDN+SVPV A +L R+LF
Sbjct: 130 LVQVVSRSGSASEAVGGPLLYVLVLAVATILEWRASLVGVMAVCQMAAGDGLADLVGRHVKGKKWWFSEHKSYVGSLAFVAGGFVVSLALVGWLHALGCIAVSAQAAALRVLGISAVCAVVEAVAMDGV-DDNVSVPVAAAVLTRVLF 276
BLAST of mRNA_E_fasciculatus_S2_contig9449.17481.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DMS8_9STRA) HSP 1 Score: 118 bits (296), Expect = 4.610e-29 Identity = 70/156 (44.87%), Postives = 97/156 (62.18%), Query Frame = 1
Query: 1 LYSVVAWTGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMQMAVGDGMADLVGRQFGKHKWRKGGEKSVEGSAAFVSGSFVASVAMIQWFNHFGLLSV-------TPAEAAARAAAISFASAAVELFPPRLVGDDNISVPVTALILGRLLFR 447
L + ++ +G A E L GP YSL ++ T+ WRTS++ ++A+ QMA GDG+AD++GR+FG W KS+EGSAAFV G FV S+A+I W + F +LS+ + A A R IS A AA+EL + DDN SVPV AL+LG + R
Sbjct: 146 LLAAISRSGGAHEALGGPFIYSLNLLAATLFGWRTSLISVVAIAQMAAGDGLADIIGRRFGASSWTFSPTKSMEGSAAFVVGGFVCSMALIGWLSSFKVLSLGYGSGWLSFAALAPRILGISLACAAIELVT---LVDDNYSVPVLALVLGHIFLR 298
BLAST of mRNA_E_fasciculatus_S2_contig9449.17481.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS51_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.320e-25 Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = 1
Query: 1 LYSVVAWTGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMQMAVGDGMADLVGRQFGKHKWRKGGEKSVEGSAAFVSGSFVASVAMIQWFNHFGLLSVTP---AEAAARAAAISFASAAVELFPPRLVGDDNISVPVTALILGRLLF 444
L V+ +G A E + GP Y + +++ T WR+S++G++A+ QMA GDG+AD+VGR+ G +W K+ GS FV G F S+ ++ W F + + A+ A R AA+S ASA VEL P +GDDN++VP+TA + L F
Sbjct: 152 LLKAVSRSGDAKEAVGGPFLYVVMLLVFTTAYWRSSIIGVVALAQMAAGDGLADIVGRKVGGARWPFSDRKTYAGSLGFVLGGFTVSLGLVYWLATFSCVDLGGLGLADVAVRLAAVSVASALVELVP---LGDDNVTVPLTAAVFTALAF 299
BLAST of mRNA_E_fasciculatus_S2_contig9449.17481.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A703_TRICV) HSP 1 Score: 105 bits (261), Expect = 1.230e-24 Identity = 65/150 (43.33%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 1 LYSVVAWTGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMQMAVGDGMADLVGRQFGK-HKWRKGGEKSVEGSAAFVSGSFVASVAMIQWFNHFGLLSVTPA--EAAARAAAISFASAAVELFPPRLVGDDNISVPVTALILGRLL 441
L + V+ +G ASE L GPL Y + + T++ WR S++G+ A+ MA GDGMAD++GR+FG+ +KW +KS+ GSAAF V S + W + G+ A + A R A I+ SAAVEL P +GDDN +VP+TA IL L
Sbjct: 73 LANAVSRSGSASEALGGPLLYCIVLFFSTLIFWRDSLIGVAAVSVMAAGDGMADIIGRRFGRGNKWWFSNDKSIAGSAAFAISGAVVSTGLAWWLAYTGVWMPPMAMVDVAQRLAIINILSAAVELVP---IGDDNWTVPLTAGILAAAL 219
BLAST of mRNA_E_fasciculatus_S2_contig9449.17481.1 vs.
Match: Uncharacterized (protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C688_DIALT) HSP 1 Score: 106 bits (264), Expect = 2.560e-24 Identity = 62/139 (44.60%), Postives = 89/139 (64.03%), Query Frame = 1
Query: 1 LYSVVAWTGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMQMAVGDGMADLVGRQFG-KHKWRKGGEKSVEGSAAFVSGSFVASVAMIQWFNHFGLLSVTPAEAAARAAAISFASAAVELFPPRLVGDDNISVPV 414
L + V+ +G SE L GP Y L ++ TV+ WR S VG++A+ QMAVGDG+AD+VGR+ G ++W KSV GS AFV+G+ AS+ ++ W +G+L+ + R IS A AAVEL P ++ DDN+SVP+
Sbjct: 157 LVAAVSRSGERSEVLRGPFIYVLVLLGATVLCWRASAVGVVAIAQMAVGDGVADIVGRRLGGSNRWPFNPSKSVAGSVAFVAGATGASIGLLAWLGAWGVLAPLAPDTPLRLLLISVACAAVELLPTDVL-DDNVSVPL 294
BLAST of mRNA_E_fasciculatus_S2_contig9449.17481.1 vs.
Match: Predicted (protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MRG0_MICPC) HSP 1 Score: 102 bits (255), Expect = 1.720e-23 Identity = 64/145 (44.14%), Postives = 86/145 (59.31%), Query Frame = 1
Query: 13 VAWTGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMQMAVGDGMADLVGRQFGK-HKWRKGGEKSVEGSAAFVSGSFVASVAMIQWFNHFGLLSVTPAEAAARAAAISFASAAVELFPPRLVGDDNISVPVTALILGRLLF 444
V+ G +E L GPL Y+ +V+ T V WR S G+ A+ M GDG+AD+VGR+ GK + +KS GSAA G F S+A+ +F+ G +SV P AA R A I+ A A+E P DDNISVPV A++LG +LF
Sbjct: 104 VSREGDRTELLRGPLYYTAVLVVCTAVFWRGSPSGIAALSLMCGGDGLADIVGRRLGKGNPLPFNADKSYAGSAAMFLGGFGLSLALCAFFHALGYMSVDPGSAAGRLALIAAACTAIEALPAGSFLDDNISVPVVAVVLGGVLF 248
BLAST of mRNA_E_fasciculatus_S2_contig9449.17481.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6U9_TRICV) HSP 1 Score: 105 bits (261), Expect = 2.980e-23 Identity = 65/150 (43.33%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 1 LYSVVAWTGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMQMAVGDGMADLVGRQFGK-HKWRKGGEKSVEGSAAFVSGSFVASVAMIQWFNHFGLLSVTPA--EAAARAAAISFASAAVELFPPRLVGDDNISVPVTALILGRLL 441
L + V+ +G ASE L GPL Y + + T++ WR S++G+ A+ MA GDGMAD++GR+FG+ +KW +KS+ GSAAF V S + W + G+ A + A R A I+ SAAVEL P +GDDN +VP+TA IL L
Sbjct: 267 LANAVSRSGSASEALGGPLLYCIVLFFSTLIFWRDSLIGVAAVSVMAAGDGMADIIGRRFGRGNKWWFSNDKSIAGSAAFAISGAVVSTGLAWWLAYTGVWMPPMAMVDVAQRLAIINILSAAVELVP---IGDDNWTVPLTAGILAAAL 413
BLAST of mRNA_E_fasciculatus_S2_contig9449.17481.1 vs.
Match: Hypothetical (protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KYC2_9STRA) HSP 1 Score: 100 bits (248), Expect = 6.660e-23 Identity = 65/149 (43.62%), Postives = 88/149 (59.06%), Query Frame = 1
Query: 1 LYSVVAWTGRASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMQMAVGDGMADLVGRQFGKH-KWRKGGEKSVEGSAAFVSGSFVASVAMIQWFNHFGLLSVTPA--EAAARAAAISFASAAVELFPPRLVGDDNISVPVTALILGRL 438
L + V+ G E L GP Y + ++ + WR S VG+IA+ MA GDGMAD+VGR+ GK+ KW KSV GS AF S + SV ++ WFN G + + A E R A IS A +A+EL P GDDN +VPV+A++L +L
Sbjct: 54 LANAVSRGGNKEEALGGPFIYCIVLLTSILAFWRDSPVGIIALSAMAGGDGMADIVGRRLGKNNKWFFSPSKSVAGSLAFWGFSTIFSVGLVLWFNFTGCMELPYALPELVTRIALISAACSAIELQP---YGDDNWTVPVSAVVLSKL 199 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9449.17481.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9449.17481.1 >prot_E_fasciculatus_S2_contig9449.17481.1 ID=prot_E_fasciculatus_S2_contig9449.17481.1|Name=mRNA_E_fasciculatus_S2_contig9449.17481.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=109bp MMQMAVGDGMADLVGRQFGKHKWRKGGEKSVEGSAAFVSGSFVASVAMIQback to top mRNA from alignment at E_fasciculatus_S2_contig9449:338..2007- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9449.17481.1 ID=mRNA_E_fasciculatus_S2_contig9449.17481.1|Name=mRNA_E_fasciculatus_S2_contig9449.17481.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1670bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9449:338..2007- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9449:338..2007- >mRNA_E_fasciculatus_S2_contig9449.17481.1 ID=mRNA_E_fasciculatus_S2_contig9449.17481.1|Name=mRNA_E_fasciculatus_S2_contig9449.17481.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=327bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9449:338..2007- (Ectocarpus fasciculatus EfasUO2)back to top |