mRNA_E_fasciculatus_S2_contig9437.17475.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9437.17475.1
Unique NamemRNA_E_fasciculatus_S2_contig9437.17475.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9437.17475.1 vs.
Match: Phosphoribulokinase (n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBI0_ECTSI)

HSP 1 Score: 850 bits (2196), Expect = 3.240e-310
Identity = 427/435 (98.16%), Postives = 429/435 (98.62%), Query Frame = 1
Query:   64 MMKTCAFLAVTAGVVAGSPWAGQASKSAAFVGAPVGRSAPWGLGTRWASSTPTSTKARAGAMSRSARARLEALSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAFIAPQRSEADVVIQVLPTQLIPGDTEGKILRTRMVQKEGLDFFDPAFLFDEGSTISWVPCGRKLTCSFPGIKFAYGPDTYYDNEVSVIEMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILKQADSPGSNNGTGFLQTLVALKLREVYERITKKNVSVKLPETVAQ 1368
            MMKTCAFLAV AGV  GSPWAGQASKSAAFVGAPVGRSAPWGLGTRWASSTPTSTKAR G MSRSARARLEALSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVD+RVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAFIAPQRSEADVVIQVLPTQLIPGDTEGKILRTRMVQKEGLDFFDPAFLFDEGSTISWVPCGRKLTCSFPGIKFAYGPDTYYDNEVSVIEMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILKQADSPGSNNGTGFLQTLVALKLREVYERITKK VSVKLPE+VAQ
Sbjct:    1 MMKTCAFLAVAAGVATGSPWAGQASKSAAFVGAPVGRSAPWGLGTRWASSTPTSTKARPGTMSRSARARLEALSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVDKRVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAFIAPQRSEADVVIQVLPTQLIPGDTEGKILRTRMVQKEGLDFFDPAFLFDEGSTISWVPCGRKLTCSFPGIKFAYGPDTYYDNEVSVIEMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILKQADSPGSNNGTGFLQTLVALKLREVYERITKKTVSVKLPESVAQ 435          
BLAST of mRNA_E_fasciculatus_S2_contig9437.17475.1 vs.
Match: Phosphoribulokinase (n=3 Tax=Eukaryota TaxID=2759 RepID=Q9ATC3_VAULI)

HSP 1 Score: 630 bits (1624), Expect = 1.280e-223
Identity = 304/357 (85.15%), Postives = 337/357 (94.40%), Query Frame = 1
Query:  259 ARARLEALSMKLGE-DEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAFIAPQRSEADVVIQVLPTQLIPGDTEGKILRTRMVQKEGLDFFDPAFLFDEGSTISWVPCGRKLTCSFPGIKFAYGPDTYYDNEVSVIEMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILKQADSPGSNNGTGFLQTLVALKLREVYERIT 1326
            A ++L+AL MKLG+ DE VV+IGVAADSGCGKSTFMRRLT+IFGG +VGPLGGGF NGGWETN+LVSDLTTV+CLDDYHLNDR GRKVSGRTALHT+EQKFDLM EQL+ LK G+SVMKPIYNHVNGTLDTPEE+KPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDA+IAPQR++ADVV+QVLPT+L+P D EGKILRTR++QKE +  F+ A+LFDEGSTI+W+PCGRKLTCSFPGIKFAYGPDTY+DNEVSV+EMDGQFDNLQELIYVE  LSN GTKFYGELTQNILK +DSPGSNNGTGFLQT++ALKLRE+YE+IT
Sbjct:   42 AASKLQALEMKLGDPDEPVVIIGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGNGGWETNTLVSDLTTVICLDDYHLNDRNGRKVSGRTALHTDEQKFDLMTEQLSALKRGESVMKPIYNHVNGTLDTPEEVKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAYIAPQRAQADVVLQVLPTKLVPEDKEGKILRTRLIQKENVKNFETAYLFDEGSTINWIPCGRKLTCSFPGIKFAYGPDTYFDNEVSVLEMDGQFDNLQELIYVEGFLSNTGTKFYGELTQNILKLSDSPGSNNGTGFLQTVIALKLREIYEKIT 398          
BLAST of mRNA_E_fasciculatus_S2_contig9437.17475.1 vs.
Match: Phosphoribulokinase (n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK3_9STRA)

HSP 1 Score: 626 bits (1614), Expect = 5.290e-222
Identity = 306/361 (84.76%), Postives = 335/361 (92.80%), Query Frame = 1
Query:  259 ARARLEALSMKLGE-DEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFDN-GGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAFIAPQRSEADVVIQVLPTQLIPGDTEGKILRTRMVQKEGLDFFDPAFLFDEGSTISWVPCGRKLTCSFPGIKFAYGPDTYYDNEVSVIEMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILKQADSPGSNNGTGFLQTLVALKLREVYERITKKN 1335
            A AR +AL MKLG+ DE +V+IGVAADSGCGKSTFMRRLT+IFGG TVGPLGGGF   GGWETN+LVSDLTTV+CLDDYHLNDRGGRKVSGRTALHT EQ+FDLM EQL  LK G SV KPIYNHVNGTLD PEEIKPTPI+IIEGLHPFVD+RVRDLLDFTIYLDISDEIKFAWKIQRDM+ERGHSLESIQASIEARKPDFDA+IAPQR++ADVV+QVLPTQL+P DTEGKILRTR++QKEG+  FDPA+LFDEGS+I+WVPCGRKLTCSFPGIKFAYGPD ++DNEVSV+EMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILK +DSPGSNNGTGF Q+++ALKLREVYERIT   
Sbjct:   45 AAARWQALQMKLGDADEPIVVIGVAADSGCGKSTFMRRLTNIFGGSTVGPLGGGFGAPGGWETNTLVSDLTTVICLDDYHLNDRGGRKVSGRTALHTAEQRFDLMAEQLAALKRGDSVKKPIYNHVNGTLDEPEEIKPTPIIIIEGLHPFVDQRVRDLLDFTIYLDISDEIKFAWKIQRDMLERGHSLESIQASIEARKPDFDAYIAPQRAQADVVLQVLPTQLVPDDTEGKILRTRLIQKEGVANFDPAYLFDEGSSITWVPCGRKLTCSFPGIKFAYGPDVFFDNEVSVLEMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILKLSDSPGSNNGTGFFQSVIALKLREVYERITSSK 405          
BLAST of mRNA_E_fasciculatus_S2_contig9437.17475.1 vs.
Match: Phosphoribulokinase (n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S2Y062_9STRA)

HSP 1 Score: 586 bits (1511), Expect = 3.220e-206
Identity = 281/374 (75.13%), Postives = 327/374 (87.43%), Query Frame = 1
Query:  217 PTSTKARAGAMSRSARARLEALSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFD-NGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAFIAPQRSEADVVIQVLPTQLIPGDTEGKILRTRMVQKEGLDFFDPAFLFDEGSTISWVPCGRKLTCSFPGIKFAYGPDTYYDNEVSVIEMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILKQADSPGSNNGTGFLQTLVALKLREVYERITKKN 1335
            PTS   R G+       RL+    KL + E+VVLIGVAADSGCGKSTFMRRLT++FGG  VGPLGGGF   GGWETN+LVSD TTV+CLDDYHLNDR GRKVSG TAL+T E  FDLMYEQL +LK+GK++ KPIYNHVNGTLDTPE I+PTPIVIIEGLHP  DERVR+LLDF++YLDISD++KFAWKIQRDM ERGHSLESIQASIEARKPDFDA++APQ+  ADVVI+VLPTQLIP D EGKILR RM+QK+G+  FDPA+LFDEGS+++W PCGRKL+CS+PGIKFAYGPDTYYDNEVSV+EMDGQFDNLQEL+YVESH+SN+GTKF+GELTQ ILK ++SPGSNNGTGF QT+ +LK+RE+YE+I+K+ 
Sbjct:   43 PTSVSKRTGS-------RLQNFVAKLADGEQVVLIGVAADSGCGKSTFMRRLTNVFGGTNVGPLGGGFGAEGGWETNTLVSDTTTVICLDDYHLNDRNGRKVSGLTALNTLENNFDLMYEQLKELKSGKTISKPIYNHVNGTLDTPETIEPTPIVIIEGLHPMHDERVRELLDFSMYLDISDDVKFAWKIQRDMEERGHSLESIQASIEARKPDFDAYVAPQKQYADVVIEVLPTQLIPDDNEGKILRVRMIQKDGVPGFDPAYLFDEGSSVTWTPCGRKLSCSYPGIKFAYGPDTYYDNEVSVVEMDGQFDNLQELVYVESHMSNVGTKFFGELTQQILKLSNSPGSNNGTGFFQTMASLKIREMYEKISKQQ 409          
BLAST of mRNA_E_fasciculatus_S2_contig9437.17475.1 vs.
Match: Phosphoribulokinase (n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A5JEM0_HETAK)

HSP 1 Score: 578 bits (1491), Expect = 1.230e-203
Identity = 277/356 (77.81%), Postives = 315/356 (88.48%), Query Frame = 1
Query:  277 ALSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAFIAPQRSEADVVIQVLPTQLIPGDTEGKILRTRMVQKEGLDFFDPAFLFDEGSTISWVPCGRKLTCSFPGIKFAYGPDTYYDNEVSVIEMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILKQADSPGSNNGTGFLQTLVALKLREVYERITKKNVSV 1344
            AL M L E E+VVLIGVAADSGCGKSTFMRRLT +FG D V  LGGGF NGGWETN+LVS  TTV+CLDDYHLNDR GRKVSG TALH +E  FDLMYEQL +LK+GK++ KPIYNHVNGTLDTPEE++PTPIVI+EGLHP +D+RV +LLDF IYLDISDEIKFAWKIQRDM ERGHSLESI+ASIEARKPDF+AF++PQR+++D+VIQVLPT+LIP  T+GKILR RM+QKEG   F PA+LFDEGSTISW PCGRKLTCS+PGIKF+YGPDT++DNEVSVIEMDG+FDNL+EL+YVESHLS  G+KFYGEL Q +LK ++SPGSNNGTGF QTL ALKLREVYE ITKK V V
Sbjct:   35 ALQMALKEGEEVVLIGVAADSGCGKSTFMRRLTGMFGTDGVQMLGGGFGNGGWETNTLVSPSTTVICLDDYHLNDRNGRKVSGLTALHEKENNFDLMYEQLKELKSGKTIKKPIYNHVNGTLDTPEEVEPTPIVIVEGLHPMLDDRVAELLDFRIYLDISDEIKFAWKIQRDMEERGHSLESIKASIEARKPDFEAFVSPQRAKSDIVIQVLPTELIPDSTDGKILRVRMIQKEGNPNFKPAYLFDEGSTISWTPCGRKLTCSYPGIKFSYGPDTFFDNEVSVIEMDGEFDNLEELVYVESHLSQTGSKFYGELAQQMLKMSNSPGSNNGTGFFQTLTALKLREVYETITKKEVVV 390          
BLAST of mRNA_E_fasciculatus_S2_contig9437.17475.1 vs.
Match: Phosphoribulokinase (n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZKD2_9STRA)

HSP 1 Score: 567 bits (1462), Expect = 3.760e-199
Identity = 268/360 (74.44%), Postives = 307/360 (85.28%), Query Frame = 1
Query:  286 MKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAFIAPQRSEADVVIQVLPTQLIPGDTEGKILRTRMVQKEGLDFFDPAFLFDEGSTISWVPCGRKLTCSFPGIKFAYGPDTYYDNEVSVIEMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILKQADSPGSNNGTGFLQTLVALKLREVYERITKKNVSVKLPETVA 1365
            M +  D  VVLIGVAADSGCGKSTFMRRLT IFGG  VGPLGGGFDNGGWETN+LVSD TTV+CLDDYHLNDRGGRKV+GRTAL   E  FDLMYEQL +LK G ++ KPIYNHVNGTLDTPEEI PT IVI+EGLHP  D RVR+LLDF++YLDI+D++KFAWKIQRDM+ERGHSLESIQ SIEARKPDFDAF+APQR +ADVVIQVLPT LIP + EGK+L+ + +QKEG   FDPA+LFDEGSTI W PCG+KLTCS+PGIKFAYGPD +  N+V+V+EMDG+FDNLQELIYVESHLSN  TKFYGELTQ ++K  DSPGS+NGTGF QTL +LK+RE YE+++   V V+ P  VA
Sbjct:   35 MTMAADGGVVLIGVAADSGCGKSTFMRRLTGIFGGTNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHLNDRGGRKVTGRTALDLAENNFDLMYEQLKELKAGNAIKKPIYNHVNGTLDTPEEITPTQIVIVEGLHPMADPRVRELLDFSLYLDITDDVKFAWKIQRDMVERGHSLESIQQSIEARKPDFDAFVAPQRGDADVVIQVLPTDLIPDEKEGKVLKVKFIQKEGKANFDPAYLFDEGSTIEWTPCGKKLTCSYPGIKFAYGPDEFLGNDVTVLEMDGKFDNLQELIYVESHLSNTATKFYGELTQQMIKMGDSPGSDNGTGFFQTLASLKIREFYEKLSGVEVEVEAPAKVA 394          
BLAST of mRNA_E_fasciculatus_S2_contig9437.17475.1 vs.
Match: Phosphoribulokinase (n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BDA5_9STRA)

HSP 1 Score: 557 bits (1435), Expect = 5.500e-195
Identity = 271/356 (76.12%), Postives = 308/356 (86.52%), Query Frame = 1
Query:  280 LSMKLGE-DEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFDNG-GWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAFIAPQRSEADVVIQVLPTQLIPGDTEGKILRTRMVQKEGLDFFDPAFLFDEGSTISWVPCGRKLTCSFPGIKFAYGPDTYYDNEVSVIEMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILKQADSPGSNNGTGFLQTLVALKLREVYERITKKNVS 1341
            +SM LG+ DE +VLIGVAADSGCGKSTFMRRL   FGG  VGPLGGGF NG GWETN+LVSD  TV+CLDDYHLNDR GRKV+ RTAL   E  FDLMYEQL  LK+GKS+ KPIYNHVNGTLDTPEEIKPT IVI+EGLHPF DERVR+L+DF++YLDISDEIKFAWKIQRDM ERGHSLESIQASIE+RKPDFD F+ PQR+ +D+VI VLPT L+  D  GK L+ +M+Q+EG+D FDP +LFDEGSTISWVPCG+KLTCSFPGIKFAYGPD Y+D EVSV+EMDG+FDNLQELIYVESHLSN  TKFYGELTQ +LK +D+PGS+NGTGF QTL ALK+RE+YE+IT K V+
Sbjct:   39 VSMALGDADEPIVLIGVAADSGCGKSTFMRRLVQNFGGSNVGPLGGGFGNGDGWETNTLVSDDVTVICLDDYHLNDREGRKVTKRTALDGAENNFDLMYEQLAALKSGKSIKKPIYNHVNGTLDTPEEIKPTNIVIVEGLHPFYDERVRELMDFSVYLDISDEIKFAWKIQRDMEERGHSLESIQASIESRKPDFDQFVGPQRAFSDLVISVLPTDLVADDV-GKTLKVKMIQREGVDNFDPVYLFDEGSTISWVPCGKKLTCSFPGIKFAYGPDVYFDKEVSVLEMDGKFDNLQELIYVESHLSNTATKFYGELTQQMLKLSDAPGSDNGTGFFQTLCALKIREIYEKITSKKVA 393          
BLAST of mRNA_E_fasciculatus_S2_contig9437.17475.1 vs.
Match: Phosphoribulokinase (n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D3L9_9STRA)

HSP 1 Score: 542 bits (1396), Expect = 4.140e-189
Identity = 261/354 (73.73%), Postives = 303/354 (85.59%), Query Frame = 1
Query:  286 MKLGE-DEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFD-NGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAFIAPQRSEADVVIQVLPTQLIPGDTEGKILRTRMVQKEGLDFFDPAFLFDEGSTISWVPCGRKLTCSFPGIKFAYGPDTYYDNEVSVIEMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILKQADSPGSNNGTGFLQTLVALKLREVYERITKKNVS 1341
            M LG+ D+ +VLIGVAADSGCGKSTFMRRL   FGG  VGPLGGGF   GGWETN+L SD  TV+CLDDYHLNDR GRKV+ RTAL   E  FDLMYEQL  LK+GKS+ KPIYNHVNGTLDTPE IKPT IVI+EGLHPF D RV DL+DF++YLDISD+IKFAWKIQRDM ERGHSLESIQASIE+RKPDFDAF+ PQR+ +D+VI+VLPT+L   D +GK L+ RM+QK+G+  F+P +LFDEGSTISWVPCG+KLTC++PGIKF YG +TY+DNEVSV+ MDG+F+NLQELIYVESHLSN+GTKFYGELTQ +LK +DSPGS+NGTGF QTL ALK+RE+YE IT K+ S
Sbjct:   38 MALGDADDPIVLIGVAADSGCGKSTFMRRLVQNFGGSNVGPLGGGFGAEGGWETNTLTSDDVTVICLDDYHLNDREGRKVTKRTALDAAENNFDLMYEQLKTLKSGKSIDKPIYNHVNGTLDTPETIKPTNIVIVEGLHPFYDSRVSDLMDFSVYLDISDDIKFAWKIQRDMEERGHSLESIQASIESRKPDFDAFVGPQRASSDLVIEVLPTELTDDD-KGKYLKVRMIQKDGVKHFNPVYLFDEGSTISWVPCGKKLTCAYPGIKFEYGSETYFDNEVSVVSMDGKFENLQELIYVESHLSNVGTKFYGELTQQMLKLSDSPGSDNGTGFFQTLCALKIREIYESITSKSTS 390          
BLAST of mRNA_E_fasciculatus_S2_contig9437.17475.1 vs.
Match: Phosphoribulokinase (n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IHU3_9STRA)

HSP 1 Score: 535 bits (1378), Expect = 2.580e-186
Identity = 256/362 (70.72%), Postives = 302/362 (83.43%), Query Frame = 1
Query:  280 LSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAFIAPQRSEADVVIQVLPTQLIPGDTEGKILRTRMVQKEGLDFFDPAFLFDEGSTISWVPCGRKLTCSFPGIKFAYGPDTYYDNEVSVIEMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILKQADSPGSNNGTGFLQTLVALKLREVYERITKKNVSVKLPETVA 1365
            L+M L E E  ++IGVAADSGCGKSTFMRRLTSIFGGD VGPLGGGFDNGGWETN+LVSDLTTV+CLDDYHLNDR GRKVSG TAL+T E  FDLMYEQ+  LK G+++ KPIYNHVNGTLDTPE ++PTPI+I EGLHP  DERVRDLLDFT+YLDISD++K  WKIQRDM ERGHSLESI ASIEARKPDFDA+IAPQ+  AD++I+VLPTQL P D   K LR R +QK G+D FDP +LFDEGSTI W+PCG+KL+CSFPGIKFA GP+ YY+ +V+V+EMDG FDN++EL+YVES LSN GTK+YGEL QN++  +D+PGS+NGTG +QTL A  +RE+YE+   K  +    E VA
Sbjct:   40 LNMALKEGETPIIIGVAADSGCGKSTFMRRLTSIFGGDVVGPLGGGFDNGGWETNTLVSDLTTVICLDDYHLNDREGRKVSGLTALNTAENNFDLMYEQVKALKEGETISKPIYNHVNGTLDTPETVEPTPIIIFEGLHPMHDERVRDLLDFTLYLDISDDVKLNWKIQRDMEERGHSLESILASIEARKPDFDAYIAPQKEFADLIIEVLPTQLDPEDK--KTLRVRSIQKCGVDGFDPCYLFDEGSTIEWMPCGKKLSCSFPGIKFASGPEKYYEKDVNVLEMDGTFDNIEELVYVESFLSNTGTKYYGELAQNMIALSDAPGSDNGTGLMQTLAAFAIRELYEKKAAKAKATAPAEAVA 399          
BLAST of mRNA_E_fasciculatus_S2_contig9437.17475.1 vs.
Match: Phosphoribulokinase (n=2 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ADQ1_9STRA)

HSP 1 Score: 530 bits (1364), Expect = 3.210e-184
Identity = 251/350 (71.71%), Postives = 295/350 (84.29%), Query Frame = 1
Query:  280 LSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAFIAPQRSEADVVIQVLPTQLIPGDTEGKILRTRMVQKEGLDFFDPAFLFDEGSTISWVPCGRKLTCSFPGIKFAYGPDTYYDNEVSVIEMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILKQADSPGSNNGTGFLQTLVALKLREVYERITK 1329
            L+M L   +  ++IGVAADSGCGKSTFMRRLTS FGGD VGPLGGGFDNGGWETN+LVSDLTTV+CLDDYHLNDR GRK SG TAL   E  FDLMYEQ+  LKNG+++ KPIYNHVNGTLDTPE I+PTPI+IIEGLHP +DERVR LLDF++YLDISDE+K  WKIQRDM ERGHSLESI ASIEARKPDFDA++APQ++ AD+ I+VLPTQL P D   K LR R +QK G+  FDP +LFD+GST+ W PCG+KL+CS+PGIKFA GPD++Y NEVSV+EMDG FDN+QE++YVESHLSN GTKFYGELTQ +L  AD+PGS+NGTG +QTL A  +R +YE+ +K
Sbjct:   38 LNMALEAGQTPIVIGVAADSGCGKSTFMRRLTSTFGGDVVGPLGGGFDNGGWETNTLVSDLTTVMCLDDYHLNDRNGRKESGLTALDERENNFDLMYEQVKALKNGETISKPIYNHVNGTLDTPETIEPTPIIIIEGLHPMLDERVRGLLDFSLYLDISDEVKLNWKIQRDMEERGHSLESILASIEARKPDFDAYVAPQKAFADLTIEVLPTQLDPEDK--KTLRVRSIQKVGVSDFDPTYLFDDGSTVEWTPCGKKLSCSYPGIKFASGPDSFYGNEVSVVEMDGTFDNIQEMVYVESHLSNTGTKFYGELTQAMLAAADAPGSDNGTGLMQTLAAFAIRNLYEKRSK 385          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9437.17475.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Phosphoribulokinase3.240e-31098.16n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBI0_ECTSI[more]
Phosphoribulokinase1.280e-22385.15n=3 Tax=Eukaryota TaxID=2759 RepID=Q9ATC3_VAULI[more]
Phosphoribulokinase5.290e-22284.76n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836C... [more]
Phosphoribulokinase3.220e-20675.13n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S2Y062_9STR... [more]
Phosphoribulokinase1.230e-20377.81n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A5JE... [more]
Phosphoribulokinase3.760e-19974.44n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A... [more]
Phosphoribulokinase5.500e-19576.12n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0... [more]
Phosphoribulokinase4.140e-18973.73n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S... [more]
Phosphoribulokinase2.580e-18670.72n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A... [more]
Phosphoribulokinase3.210e-18471.71n=2 Tax=Minutocellus polymorphus TaxID=265543 RepI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9437contigE_fasciculatus_S2_contig9437:121..5852 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score856.3
Seed ortholog evalue6.3e-246
Seed eggNOG ortholog2880.D8LBI0
Preferred namePRK
Model size1481
KEGG rclassRC00002,RC00017
KEGG koko:K00855
KEGG ReactionR01523
KEGG Pathwayko00710,ko01100,ko01120,ko01200,map00710,map01100,map01120,map01200
KEGG ModuleM00165,M00166
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0003824,GO:0004849,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0008655,GO:0008974,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009266,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009719,GO:0009725,GO:0009735,GO:0009941,GO:0009987,GO:0010033,GO:0010319,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0019899,GO:0019904,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0034404,GO:0034641,GO:0034654,GO:0042221,GO:0042455,GO:0042651,GO:0042742,GO:0042802,GO:0042803,GO:0043094,GO:0043097,GO:0043174,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046983,GO:0048046,GO:0050896,GO:0051704,GO:0051707,GO:0055035,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097718,GO:0098542,GO:0099080,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
Exons5
EggNOG free text desc.UMP salvage
EggNOG OGsCOG0572@1,KOG4203@2759
Ec32 ortholog descriptionPhosphoribulokinase
Ec32 orthologEc-27_003910.1
EC2.7.1.19
Cds size1308
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9437.17475.1prot_E_fasciculatus_S2_contig9437.17475.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9437 231..5789 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842592.1699827-UTR-E_fasciculatus_S2_contig9437:120..2301696842592.1699827-UTR-E_fasciculatus_S2_contig9437:120..230Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9437 121..230 -
1696842592.2522004-UTR-E_fasciculatus_S2_contig9437:5789..58521696842592.2522004-UTR-E_fasciculatus_S2_contig9437:5789..5852Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9437 5790..5852 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842592.1901956-CDS-E_fasciculatus_S2_contig9437:230..4431696842592.1901956-CDS-E_fasciculatus_S2_contig9437:230..443Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9437 231..443 -
1696842592.2070408-CDS-E_fasciculatus_S2_contig9437:1374..16921696842592.2070408-CDS-E_fasciculatus_S2_contig9437:1374..1692Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9437 1375..1692 -
1696842592.2207744-CDS-E_fasciculatus_S2_contig9437:2195..25191696842592.2207744-CDS-E_fasciculatus_S2_contig9437:2195..2519Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9437 2196..2519 -
1696842592.2319272-CDS-E_fasciculatus_S2_contig9437:2982..31891696842592.2319272-CDS-E_fasciculatus_S2_contig9437:2982..3189Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9437 2983..3189 -
1696842592.2424922-CDS-E_fasciculatus_S2_contig9437:5543..57891696842592.2424922-CDS-E_fasciculatus_S2_contig9437:5543..5789Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9437 5544..5789 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9437.17475.1

>prot_E_fasciculatus_S2_contig9437.17475.1 ID=prot_E_fasciculatus_S2_contig9437.17475.1|Name=mRNA_E_fasciculatus_S2_contig9437.17475.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=436bp
MMKTCAFLAVTAGVVAGSPWAGQASKSAAFVGAPVGRSAPWGLGTRWASS
TPTSTKARAGAMSRSARARLEALSMKLGEDEKVVLIGVAADSGCGKSTFM
RRLTSIFGGDTVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGR
KVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIK
PTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHS
LESIQASIEARKPDFDAFIAPQRSEADVVIQVLPTQLIPGDTEGKILRTR
MVQKEGLDFFDPAFLFDEGSTISWVPCGRKLTCSFPGIKFAYGPDTYYDN
EVSVIEMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILKQADSPGSNN
GTGFLQTLVALKLREVYERITKKNVSVKLPETVAQ*
back to top

mRNA from alignment at E_fasciculatus_S2_contig9437:121..5852-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9437.17475.1 ID=mRNA_E_fasciculatus_S2_contig9437.17475.1|Name=mRNA_E_fasciculatus_S2_contig9437.17475.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5732bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9437:121..5852- (Ectocarpus fasciculatus EfasUO2)
AGCACATGCGCATGCTGTATTTTTTTCAGTCCATACCACGTTACCTTCCC CATACCTAGAATCATGATGAAGACTTGCGCTTTCCTCGCCGTGACGGCGG GCGTGGTAGCCGGAAGCCCATGGGCTGGGCAGGCGTCGAAGAGCGCGGCT TTTGTGGGCGCTCCTGTGGGGCGATCAGCCCCGTGGGGTTTGGGAACGCG GTGGGCGAGCAGCACGCCGACCTCGACCAAGGCGCGAGCGGGCGCCATGT CGCGATCCGCACGCGCTCGCCTTGAAGCCTTGAGCATGAAGCTGGGCGAG GACGAGAAGGTGCGTCTCCGGTGGTTGAGCGTGCGGTTGTTGTGTTGCGG CGATCTCACTCATGTGCCGCCTCTCGTGGTCTGTCTCGCGATATATATGA AAAAATCCCCTGGTCCCCAAAGGCAAATACGTAAGCGCGTTTGCCTGCAT AAAACACACATCATCAGCACGCACGAGTTTCATGATTCAACAACCTCTGG TCGAGGCCAACACCCGCAAGAGTGTGTACAACGTAGGCTCTGTACAACGT AGGCTCTCCTGCTGTGTGGTGCGCTACTTGTCTGGTGGTTCATGTAGCAG CCTGGAGGAACGGGTCCAGGCTGGGGTCCAATATGTGTACACCACGCGTG GGCAAGATGTAGACTGCCACACCAGCTGATAAAAAAAATACGTAAAAAAT ATCATCCTTGAAAACATTCGGCATGAGGGAGAGCAGTGGAGCGGTAGCAG GGTACGTTTTCAACTCGGTGATGAGAGAGACACAGTGGGCGGGCGGGCGG GTTGGTGCGCTGACATGGCGGTATCCCACGGTGGTTCACGATGGCCCCGT GTCCTTCTTTTTTCCCTACTTGTACGCACCCGCAGCACGCAGCGAGAGGC AGCAGGCTGCTTGTTGACTTTGCAGTTTCGAAAGGCAGCGCACACGCACA CACCACCCCCAAAGATTCTCACCAGGAGGATGCCCTATAACATGCAAAAT AGAGAGAACCGGGTGTTCTCAGATGATGCGAAGTACACGGTTGGTGATAC GGCCTTTCGGTCGAAACGTCTTGTACGGCTCAGATGGCGAATTTCGTTAA GAATCGCTATGTACAACGTAAGCTTGAAATATCACGTCCTTCGCTGCTGT AGTCTACTCCACGTTACATGTTCAGAGTAAAGGAGGGGGGAACTACGCAT TGTAGATTGAAATGGGTATCTTGTGCTCTGCTCTGCAGTCCAAAGTGTGG TGCGGTTGTGTGGCAAGCTAGCGTCCACTGCTGTTTGTCTTACCCGGGTC AGTGTCCAAACCAGCTTACCCGTGATGTAGACGGCACGACCAGACTCAAA CCAACATCTTCGTTTGATTTGTCACATGTAGACTACACGCCAAACACCGA TGACGTGGATTCCGCCAATGCAGCCATTTTTGTGCAACAACCGATCAACG CGGCGGCCTTTTTGCAGCACTACTGTAGCAGCCGAGTTGGGGTAACATGA GCAGTAGAGTGCCAGTCATCCCCGCACACCGTTTGTAGAGGGTACGCGTG AGTTGAAGGCATACGCGAGATATGCGGGCCAGTTCGAGGTGTGGCAGCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCTCCCCCCCGCGTC GCTCCCTTCTCTTTTTTTTTTTTTTTCCTTTTTTCTCTTTCTTTTTTNNN NNNNNNNCCCCCCCACCTTGTTTGGGGTGGGCCGGGAGTGGAAGGAAGCA CCCGGGAATGGGGCCCGCTTGGGGGGGGGGCCCCCCCCCCCCCCCCCCCC CCCTATTCCGGCTTGAGCCCGGTGGTATATAGCTCGTTTTTTTTCTCTAG TTTGCCTCTACTCACTGCTGTATAGACTTCAACACGTCCCCTTCGACTGC TACTGCTATGATTATATCTCGAACGGATAGTCTTTCTGTGTTTCTATTCA TTTTTCCTAATAAAAAATCTCTGTCGGCATGAATATCGCCCACGGCTACA AGACACCCTTGCGGACGTGTCTCTCGGAGTTGCTGGTGCGAGTAAACAGT TTAGGTGACCACCCCATTACCCTATCCAGTACGTTCCCACCCCTGTTCTC TAAGCATACCTTGTTGTACCGCAACGCCGCGCGCCCGGGATTGTTCGCTG GAACGATTTTTCCTCTGTCGCCGGGTGCGCGAATCGTGAAGCTGAACGTT GTTTGCACTGCTAAAAAACACGATTTATAATATTTTGTAGGGTGCGATCC GTGTTACATTCCCCGTCTCGTGGACCGTCCGGAGCCAGTTTGTAGGCCAG GTGTTATATGCATGCGTCCTTGTGCCCCCCATCCTAGTGAAGTGCTTGAA ATGCCTTAGACTTGCGCCTCGCTGATTGTCTTGCTTACAGCAGTAGTAAG GACGTACCCCCGTAGAAAACTTGGCCACAACGCACCACCGCAACATCCAC ATCCGGCAGCTAAATAGCAGAAAACAGCTCCATGACATGATTTGAGGATT TGATTTGATTCACGTCGTCTTGTTCATGAACGCCTTTTACCCCCCCACGC CTTCACGAACACCTACACCCACCGAATCTTACCTCTCGGTCGTCCTCCGC CCGCCCGTCCCCGCTGCCTTATGTCCTACCTACCCCCAACCCTCTGACCC AACTACGAAAAAGGTGGTGCTTATCGGTGTGGCCGCCGACTCCGGTTGCG GAAAGTCGACGTTCATGCGCCGGCTGACTTCCATCTTCGGGGGCGACACC GTGGGCCCCCTGGGGGGAGGCTTCGACAACGGCGGCTGGGAGACGAACTC CCTGGTTTCCGACCTCACTACCGTCCTGTGCTTGGACGACTACCACCTTA ACGACCGCGGGGGACGCAAGGTATGGCTTGACTCCCGGTTTTGGTTGCTT TCAAGGATGTCATTCCAACCAATATCAAAGCGTCTGCCAGGAAGTTGAGG TCAAGCCCGCGGGCCAGGCGTGTACGTACAGAAACGCTACACACGAATGT GTTTCCGGCGTTGTGTTCTTTCATGATTGACGCAACACCGACAAACGCCC TCTGCTCGCCGAGGTCCGTATCTACATTTCACGGCAAGCAGAGGATGTTG TCGGTATTGCGTCGGTCATAAAAGAACACAACGTCGGCAACACATCGTGT GTAGCGTTTCTGTACGTCAACGCCTGGCCCGCGGGCTTGACCCCAATTTC CTGGCAGAAGCATTTTATCAGTGGACTTTCAGGATCCCCGGGCGATACTT GCGCGTGTTCCTGACTTTCTCGCCCGCGGCGATCGCTCGTTATGCGTGTC GGCTCTGCTGTCTCGGTTCTAAATCCCGACCAGGTGTCGGGCAGGACCGC GCTCCACACCGAAGAGCAGAAGTTCGACCTCATGTACGAGCAGCTCAATG ACCTCAAGAACGGCAAGAGCGTCATGAAGCCCATCTACAACCACGTGAAC GGGACCCTGGACACCCCCGAGGAGATCAAGCCCACCCCCATCGTGATCAT CGAGGGCCTCCACCCCTTCGTCGACGAGCGCGTGCGCGACCTGCTCGACT TCACCATCTACCTGGACATCTCCGACGAGATCAAGTTCGCGTGGAAGATC CAGCGTGACATGATGGAGCGCGGACACTCCCTGGAGTCCATCCAGGCTTC CATCGAGGTGCGTGCCACTTTCGTCTTTCGTCCAATTGGACGGGGGGGTG GGGAATGTGTCTGAATGAATCTTGTTTCTGATACGTCCCGCGCTGTCGCC TTCTTACGAGAGTTTGCGGCCATTTCTGTCGGCTGGTTCTTGTTTCCCTC TCCATTCCTATCCGGCCTATGTAGTTCGATGGACTGGTGCGCCCCTGGTT TTTCAAAGCGCGATAATATTATTTGATTTGATATCATGGTGCCCTCATGA CGACTAGCGCACACACGGCGGTATTCCTGTCTCTTGCCTCGCCGGCGGTT TGAGGCTGGCGAAGCACTAACGCTCTGCAGGCGTTCACCAATCGCGTGTG CTATCCTCGTTTCAAATAACTCGCGCCACGTTCACTTATCTACTGGCGGT TTAACATATAAGAGTGTGAACCGTTTCGGTAGATCACGGCGCTGACCCCG TTCCCCTCTCTTGCTCGTTTTTTTTTTATGCTGCTGCCGGGACGATCGAA ACTTGCACAGGCCCGTAAGCCCGACTTCGACGCCTTCATCGCCCCCCAGC GGAGCGAGGCCGACGTAGTGATCCAGGTGCTGCCTACTCAGCTCATCCCC GGAGACACCGAGGGCAAGATCCTCCGCACTCGCATGGTGCAGAAGGAGGG CCTCGACTTCTTCGACCCCGCCTTCCTGTTCGACGAGGGCTCCACCATCT CGTGGGTGCCCTGCGGCCGCAAGCTGACTTGCTCCTTCCCGGGCATCAAG TTCGCCTACGGCCCGGACACGTACTACGACAACGAAGTGTCGGTCATCGA GATGGACGGGCAGTTCGACAACCTTCAGGTGTGTTGGATGCGTGCGTCGT CCGTTGCTGGCGTTGTCATTGCCGAGTACCCAGAGCATCAATCCGCCAAC CACTTGGGTGTACCTGCCACCGATTTCATGTCCGTTGTTGTCTAGCGATA GATCCTCCCTCGGCTGACACAAAATGTTGTCCCGGACTTTTGTTGTGTCA ACCCGATTGGGCACGCCTTCGAACTTGACGTGTTGTTATCCCGTCCAGCA TTGCCCCTACGGTTGGGGTGAGTGTTAAAATATGGCTAATCTTTTAGACT TTGGAATGTAATTAGACTGAGGAATATAAGGGTGGATTTCTTATGAATTC CTTTTTCAAACATTGGTTGGGGTGTGGCACAGCTGGCGAGCTGGTGCTGA CTAGACACGGCGCGGGGCTTGTTTTGAGTGGATGAGTGGGTTCACACGTC TACATGTACAGCGTACCGCAGGAGGGGGTCCAACCCCCCCCTCCTATGTG ACCCCGGTTGGGTCGTCTAGCTAGTAGAAGTGGAGGAAGGGGGCCAGAGG GGCAGACGACAGAATCCAATGATGGGAGGACAAAGTAGAAGAAGGGGAGG GGGAAAGAGGGGAAAAAGACAGAAACAAAAAATGGAAAAAAAAAAAAAAA AAAAAAAAAAATGTACAGCAGTCCTTGGAGAAAGTTGTATAGTAGTTGCC AACCAAACTGTAGACGTTGCTGGATGATGAGCGCTTCTTAGTCTCTTCGG TCCATGCATCATCACCTCCCATTCGCTTTATTCTCCTTCCCTCCGCAGCA AGTTGGTACCGCCGTCCTTGGTCCTCCTGACCTCGCCCCGCCCTCCTCCA CTGCGACCTTGATGTACCTTCTCCCGGCCTAAGCCGGTATGTGTGTCACA GAACTTGACCCCTGATTCCCTGACCCCCTTTCCTTCTTCGAATGACCCCG TGTAAACAGGAGCTCATCTACGTCGAGTCGCACCTGTCCAACATCGGCAC CAAGTTCTACGGAGAGCTGACCCAGAACATCCTCAAGCAGGCAGACTCGC CCGGCTCCAACAACGGCACCGGCTTCTTGCAGACCCTGGTGGCTCTTAAG CTTAGGGAGGTGTACGAGAGGATCACCAAGAAGAACGTCAGCGTCAAGCT TCCCGAGACCGTCGCTCAGTAACCCTTCTAGTTTTTGGTTGAAAACGTCG AAGCCATCGTGAGTGTAGTCGAATCGAGTTGATTGCGTAGTCCTCTCAAG ACTGGCGCGACGCAGTGGCGCTGTTCGTAGAA
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9437:121..5852-

>mRNA_E_fasciculatus_S2_contig9437.17475.1 ID=mRNA_E_fasciculatus_S2_contig9437.17475.1|Name=mRNA_E_fasciculatus_S2_contig9437.17475.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1308bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9437:121..5852- (Ectocarpus fasciculatus EfasUO2)
ATGATGAAGACTTGCGCTTTCCTCGCCGTGACGGCGGGCGTGGTAGCCGG
AAGCCCATGGGCTGGGCAGGCGTCGAAGAGCGCGGCTTTTGTGGGCGCTC
CTGTGGGGCGATCAGCCCCGTGGGGTTTGGGAACGCGGTGGGCGAGCAGC
ACGCCGACCTCGACCAAGGCGCGAGCGGGCGCCATGTCGCGATCCGCACG
CGCTCGCCTTGAAGCCTTGAGCATGAAGCTGGGCGAGGACGAGAAGGTGG
TGCTTATCGGTGTGGCCGCCGACTCCGGTTGCGGAAAGTCGACGTTCATG
CGCCGGCTGACTTCCATCTTCGGGGGCGACACCGTGGGCCCCCTGGGGGG
AGGCTTCGACAACGGCGGCTGGGAGACGAACTCCCTGGTTTCCGACCTCA
CTACCGTCCTGTGCTTGGACGACTACCACCTTAACGACCGCGGGGGACGC
AAGGTGTCGGGCAGGACCGCGCTCCACACCGAAGAGCAGAAGTTCGACCT
CATGTACGAGCAGCTCAATGACCTCAAGAACGGCAAGAGCGTCATGAAGC
CCATCTACAACCACGTGAACGGGACCCTGGACACCCCCGAGGAGATCAAG
CCCACCCCCATCGTGATCATCGAGGGCCTCCACCCCTTCGTCGACGAGCG
CGTGCGCGACCTGCTCGACTTCACCATCTACCTGGACATCTCCGACGAGA
TCAAGTTCGCGTGGAAGATCCAGCGTGACATGATGGAGCGCGGACACTCC
CTGGAGTCCATCCAGGCTTCCATCGAGGCCCGTAAGCCCGACTTCGACGC
CTTCATCGCCCCCCAGCGGAGCGAGGCCGACGTAGTGATCCAGGTGCTGC
CTACTCAGCTCATCCCCGGAGACACCGAGGGCAAGATCCTCCGCACTCGC
ATGGTGCAGAAGGAGGGCCTCGACTTCTTCGACCCCGCCTTCCTGTTCGA
CGAGGGCTCCACCATCTCGTGGGTGCCCTGCGGCCGCAAGCTGACTTGCT
CCTTCCCGGGCATCAAGTTCGCCTACGGCCCGGACACGTACTACGACAAC
GAAGTGTCGGTCATCGAGATGGACGGGCAGTTCGACAACCTTCAGGAGCT
CATCTACGTCGAGTCGCACCTGTCCAACATCGGCACCAAGTTCTACGGAG
AGCTGACCCAGAACATCCTCAAGCAGGCAGACTCGCCCGGCTCCAACAAC
GGCACCGGCTTCTTGCAGACCCTGGTGGCTCTTAAGCTTAGGGAGGTGTA
CGAGAGGATCACCAAGAAGAACGTCAGCGTCAAGCTTCCCGAGACCGTCG
CTCAGTAA
back to top