mRNA_E_fasciculatus_S2_contig943.17471.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig943.17471.1 vs.
Match: RGS (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI) HSP 1 Score: 305 bits (781), Expect = 3.270e-95 Identity = 153/172 (88.95%), Postives = 160/172 (93.02%), Query Frame = 1
Query: 1 RGRPEREEMEVWDFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSRYQHEDYAAPTNDPTRPSPSQFGTFCYITNTFVKAGSPEEVNISGMDKKRILELYHKGEESFEDINEEERRMVFGPAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPL*AGVAAS 516
RGRPEREEMEVW+FERLARTPLLAVAFEDYSKRALCHESVLFL+EVSRYQHEDYA PT D R SPSQFGTFCYITNTF+KAGSPEEVNIS DKKRILELY KGEE FED+NEEERR++FG AYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQ MMDSPPL AGVAA+
Sbjct: 358 RGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDAIRSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQTMMDSPPLPAGVAAA 529
BLAST of mRNA_E_fasciculatus_S2_contig943.17471.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI) HSP 1 Score: 270 bits (690), Expect = 1.080e-80 Identity = 138/168 (82.14%), Postives = 151/168 (89.88%), Query Frame = 1
Query: 13 EREEMEVWDFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSRYQHEDYAAPTNDPTRPSPSQFGTFCYITNTFVKAGSPEEVNISGMDKKRILELYHKGEESFEDINEEERRMVFGPAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPL*AGVAAS 516
+REEMEVWDFERL RTPLLA AFEDYSKRALCHESVLFLSEVSRYQ++DYA PTN P+QFGTFCYIT+TF+KAG+PEEVNIS D+K ILELY KGEESFE++NEEERRMVF +YLEVKSMLEANLLRRFLNTD+FKSVR QRENVQAMMDSPPL AGVAA+
Sbjct: 454 DREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTN-AAGTCPTQFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEVNEEERRMVFKRSYLEVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSPPLPAGVAAA 620
BLAST of mRNA_E_fasciculatus_S2_contig943.17471.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T5_ECTSI) HSP 1 Score: 258 bits (659), Expect = 3.690e-80 Identity = 133/165 (80.61%), Postives = 144/165 (87.27%), Query Frame = 1
Query: 25 MEVWDFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSRYQHEDYAAPTNDPTRPS-PSQFGTFCYITNTFVKAGSPEEVNISGMDKKRILELYHKGEESFEDINEEERRMVFGPAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPP-L*AGVAA 513
MEVW+FERLARTPLLA AFEDYSKRALCHESVLFLSEVSRYQ +DYA + S P+QFGTFCYIT+TF+K GSPEEVNIS DKK IL++YHKGEESF +NEE+RRM+F PAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPP L AGV A
Sbjct: 117 MEVWNFERLARTPLLAAAFEDYSKRALCHESVLFLSEVSRYQSDDYATSARPSSESSCPTQFGTFCYITDTFIKGGSPEEVNISDADKKAILDVYHKGEESFGGVNEEDRRMIFSPAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPMLPAGVGA 281
BLAST of mRNA_E_fasciculatus_S2_contig943.17471.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE) HSP 1 Score: 259 bits (663), Expect = 1.780e-77 Identity = 133/168 (79.17%), Postives = 147/168 (87.50%), Query Frame = 1
Query: 13 EREEMEVWDFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSRYQHEDYAAPTNDPTRPSPSQFGTFCYITNTFVKAGSPEEVNISGMDKKRILELYHKGEESFEDINEEERRMVFGPAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPL*AGVAAS 516
+REEMEVWDFERL RTPLLA AFEDYSKRALCHESVLFLSEVSRYQ++DYA PTN P+QFGTFC+IT+TF+KAG+PEEVNI +K ILELY KGEESFE++NEEERRMVF +YL VKSMLEANLLRRFLNTD+FKSVR QRENVQAMMDSPPL AGV A+
Sbjct: 383 DREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGTCPTQFGTFCFITDTFIKAGAPEEVNI----RKLILELYQKGEESFEEVNEEERRMVFKRSYLAVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSPPLPAGVVAA 546
BLAST of mRNA_E_fasciculatus_S2_contig943.17471.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE) HSP 1 Score: 241 bits (616), Expect = 6.560e-70 Identity = 123/173 (71.10%), Postives = 143/173 (82.66%), Query Frame = 1
Query: 1 RGRPEREEMEVWDFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSRYQHEDYAAPTNDPTRPS-PSQFGTFCYITNTFVKAGSPEEVNISGMDKKRILELYHKGEESFEDINEEERRMVFGPAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPL*AGVAAS 516
R R ++++++WDFER+ RTPLLAVAFEDYSK+ALCHES LFLSEVSRYQ+ DYA T + S P+QFGTFCYIT+TF+KAGSPEEVNIS ++K IL LYHKGEE FED+NEEERRM+F AYL VK MLEANLL RFLNTDRFKSV MQ+E+ Q M+DSP L AGVA S
Sbjct: 440 RSRSHKQDIDIWDFERIVRTPLLAVAFEDYSKKALCHESFLFLSEVSRYQNGDYAMATRASSGSSCPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNEEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSVEMQKEDTQVMVDSPHLQAGVAVS 612
BLAST of mRNA_E_fasciculatus_S2_contig943.17471.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW2_ECTSI) HSP 1 Score: 229 bits (585), Expect = 5.990e-68 Identity = 116/165 (70.30%), Postives = 135/165 (81.82%), Query Frame = 1
Query: 1 RGRPEREEMEVWDFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSRYQHEDYAAPTNDPTRPS-PSQFGTFCYITNTFVKAGSPEEVNISGMDKKRILELYHKGEESFEDINEEERRMVFGPAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPP 492
R R ++++++WDFER+ RTPLLAVAFEDYSKRALCHES LFLSEVSRYQ+ DYA + S P+QFGTFCYIT+TF+KAGS EEVNIS ++K IL LYHKGEE FED+N EERRM+F AYL VK MLEANLL RFLNTDRFKS+ MQ+EN Q M+DSPP
Sbjct: 198 RSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTKRASSGSSFPTQFGTFCYITDTFIKAGSHEEVNISDKERKLILALYHKGEELFEDVNVEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSPP 362
BLAST of mRNA_E_fasciculatus_S2_contig943.17471.1 vs.
Match: RGS (domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI) HSP 1 Score: 232 bits (592), Expect = 2.100e-67 Identity = 116/165 (70.30%), Postives = 136/165 (82.42%), Query Frame = 1
Query: 1 RGRPEREEMEVWDFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSRYQHEDYAAPTNDPTRPS-PSQFGTFCYITNTFVKAGSPEEVNISGMDKKRILELYHKGEESFEDINEEERRMVFGPAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPP 492
R R ++++++WDFER+ RTPLLAVAFEDYSKRALCHES LFLSEVSRYQ+ DYA + S P+QFGTFCYIT+TF+KAGSPEEVNIS ++K IL LYHKGEE FED+N+ ERRM+F AYL VK MLEANLL RFLNTDRFKS+ MQ+EN Q M+DSPP
Sbjct: 337 RSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTIRASSGSSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNDAERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSPP 501
BLAST of mRNA_E_fasciculatus_S2_contig943.17471.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA03_9PHAE) HSP 1 Score: 205 bits (522), Expect = 3.730e-56 Identity = 118/165 (71.52%), Postives = 125/165 (75.76%), Query Frame = 1
Query: 25 MEVWDFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSRYQHEDYAAPTNDPTRPS-PSQFGTFCYITNTFVKAGSPEEVNISGMDKKRILELYHKGEESFEDINEEERRMVFGPAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPP-L*AGVAA 513
MEVW FERLARTPLLAVAFEDYSKRALCHESVLFLSEVS YQ++DYA T + S P+QFGT CYIT+TF KAGSPEEVN S DKK I E N+ F AYL+VKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPP L AGV A
Sbjct: 482 MEVWSFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSWYQNDDYATQTRASSGSSCPTQFGTLCYITDTFTKAGSPEEVNTSDADKKAIFE------------ND------FSLAYLKVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPVLPAGVGA 628
BLAST of mRNA_E_fasciculatus_S2_contig943.17471.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV9_ECTSI) HSP 1 Score: 181 bits (460), Expect = 1.810e-52 Identity = 97/157 (61.78%), Postives = 113/157 (71.97%), Query Frame = 1
Query: 25 MEVWDFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSRYQHEDYAAPTNDPTRPSPS-QFGTFCYITNTFVKAGSPEEVNISGMDKKRILELYHKGEESFEDINEEERRMVFGPAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPP 492
MEVWDFER+A TPLLA AFEDYSKRALCHESVLFLSEVSRYQ+ +Y PT + SP QFG+FCYIT+TF+KAGSPEEVNI RM+F A+ +VK+MLEANL+ RFLNTDRFK+VR+QREN++AMM SPP
Sbjct: 1 MEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSPEEVNI---------------------------RMIFSRAHRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMMGSPP 130
BLAST of mRNA_E_fasciculatus_S2_contig943.17471.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI) HSP 1 Score: 189 bits (479), Expect = 2.990e-51 Identity = 102/165 (61.82%), Postives = 118/165 (71.52%), Query Frame = 1
Query: 1 RGRPEREEMEVWDFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSRYQHEDYAAPTNDPTRPSPS-QFGTFCYITNTFVKAGSPEEVNISGMDKKRILELYHKGEESFEDINEEERRMVFGPAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPP 492
R R +REEMEVWDFER+A TPLLA AFEDYSKRALCHESVLFLSEVSRYQ+ +Y PT + SP QFG+FCYIT+TF+KAGS EEVNI RM+F AY +VK+MLEANL+ RFLNTDRFK+VR+QREN++AMM SPP
Sbjct: 329 RSRSDREEMEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSSEEVNI---------------------------RMIFSRAYRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMMGSPP 466 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig943.17471.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig943.17471.1 >prot_E_fasciculatus_S2_contig943.17471.1 ID=prot_E_fasciculatus_S2_contig943.17471.1|Name=mRNA_E_fasciculatus_S2_contig943.17471.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=158bp MEVWDFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSRYQHEDYAAPTback to top mRNA from alignment at E_fasciculatus_S2_contig943:6085..9988+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig943.17471.1 ID=mRNA_E_fasciculatus_S2_contig943.17471.1|Name=mRNA_E_fasciculatus_S2_contig943.17471.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3904bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig943:6085..9988+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig943:6085..9988+ >mRNA_E_fasciculatus_S2_contig943.17471.1 ID=mRNA_E_fasciculatus_S2_contig943.17471.1|Name=mRNA_E_fasciculatus_S2_contig943.17471.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=474bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig943:6085..9988+ (Ectocarpus fasciculatus EfasUO2)back to top |