mRNA_E_fasciculatus_S2_contig9418.17465.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9418.17465.1
Unique NamemRNA_E_fasciculatus_S2_contig9418.17465.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9418.17465.1 vs.
Match: Long-chain-fatty-acid--CoA (ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY7_ECTSI)

HSP 1 Score: 799 bits (2063), Expect = 1.070e-287
Identity = 392/410 (95.61%), Postives = 405/410 (98.78%), Query Frame = 1 
Query:    1 TVPLYDTLGPETVEFVVNQTSLTTVVCSGVAELRKLVAIADGGRCPSLQTVVVMDGISERERREAVRAGLRVYAFAEVEGIGAAHAHPHRPPGPNDLATFCYTSGTTGNPKGALLTHRNFIADAAAAELMETFNADSTDVYLSYLPLPHIFERMVQVAIFNVGAAVGSFRGDPTLLVEDMQALRPTLMAAVPRVLNRLHDKIVQGMLAAGGLKTKLFVKACEAKVQGLHEGRLTHALWDKLVFGKVKAALGLDRIKMMVTGSAPVAAHVLTFMRILVGVPLLEGYGQTETTAGATMTQSGDFSVGHVGGPFSCTEICLKDVPEMGYRHTDSWHGGDPRDAGGGGEACEGRGEICFRGCSVFVGYYKDDEKTRDAFDENGWLLSGDIGMWNSDGALKIIADRKKNIFKLSQ 1230
            TVPLYDTLGPETVEFV+ QTSLTTVVCSGVAELRKLVAIADGGRCPSL+TVVVMDGISERERREAVRAGLRVYAFAEVEGIGA+HAHPHRPPGPNDLATFCYTSGTTGNPKGALLTHRNFIAD+AAAELMETFNADSTDVYLSYLPLPHIFERMVQVAI NVGAAVG FRGDPTLLVEDMQALRPT+MAAVPRVLNRLHDKIVQGMLAAGGLKTKLFVKACEAKVQGLHEGRLTHALWDKLVFGK+KAALGLDRI+MMVTGSAPVAAHVLTFMRIL+GVPLLEGYGQTETTAG+TMTQSGDFSVGHVGGPFSCTEICLKDVPEMGYRHTD+WHGGDPRDAGGGGEACEGRGEICFRGC+VFVGYYKDDEKTR+AFDENGWL+SGDIGMWN DGALKII DRKKNIFKLSQ
Sbjct:  109 TVPLYDTLGPETVEFVITQTSLTTVVCSGVAELRKLVAIADGGRCPSLKTVVVMDGISERERREAVRAGLRVYAFAEVEGIGASHAHPHRPPGPNDLATFCYTSGTTGNPKGALLTHRNFIADSAAAELMETFNADSTDVYLSYLPLPHIFERMVQVAILNVGAAVGIFRGDPTLLVEDMQALRPTVMAAVPRVLNRLHDKIVQGMLAAGGLKTKLFVKACEAKVQGLHEGRLTHALWDKLVFGKIKAALGLDRIQMMVTGSAPVAAHVLTFMRILIGVPLLEGYGQTETTAGSTMTQSGDFSVGHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDAGGGGEACEGRGEICFRGCNVFVGYYKDDEKTREAFDENGWLMSGDIGMWNLDGALKII-DRKKNIFKLSQ 517
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9418.17465.1 vs.
Match: Long (chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW5_9STRA)

HSP 1 Score: 577 bits (1486), Expect = 2.350e-199
Identity = 284/412 (68.93%), Postives = 323/412 (78.40%), Query Frame = 1 
Query:    1 TVPLYDTLGPETVEFVVNQTSLTTVVCSGVAELRKLVAIADGGRCPSLQTVVVMDGISERERREAVRAGLRVYAFAEVEGIGAAH--AHPHRPPGPNDLATFCYTSGTTGNPKGALLTHRNFIADAAAAELMETFNADSTDVYLSYLPLPHIFERMVQVAIFNVGAAVGSFRGDPTLLVEDMQALRPTLMAAVPRVLNRLHDKIVQGMLAAGGLKTKLFVKACEAKVQGLHEGRLTHALWDKLVFGKVKAALGLDRIKMMVTGSAPVAAHVLTFMRILVGVPLLEGYGQTETTAGATMTQSGDFSVGHVGGPFSCTEICLKDVPEMGYRHTDSWHGGDPRDAGGGGEACEGRGEICFRGCSVFVGYYKDDEKTRDAFDENGWLLSGDIGMWNSDGALKIIADRKKNIFKLSQ 1230
            TVP+YDTLGPETVEFVV QT L  V+C G AELR+L A A GG C +L   V MD +    R  A  AGLRVY  +E+E IGAAH  A PHRPP  ND+ATFCYTSGTTGNPKGAL+ H N ++DAA    M   +    +VY SYLPLPHIFER VQVA+F  GA VG +R +P  LV DM ALRP LM AVPRVLNRLHDKI  GMLAAGGLK +LFV+ACEAKV+GLH G   HALWD+L+F K++AALG+DR++++VTGSAP+A HVLTFMRIL+G  L+EGYGQTET AGAT+T  GDFS GHVGGPF CTEICL DVPEMGY HTDSWHGGDPR+ GGGGE C GRGEICFRG +VF GYYKD EKT +A D +GWL SGDIG+W +DGAL+II DRKKNIFKLSQ
Sbjct:  150 TVPMYDTLGPETVEFVVAQTGLVAVLCGGEAELRRLAAAARGGACATLAAAVTMDPVGPAARSAAEVAGLRVYLMSELEEIGAAHLEAWPHRPPSANDIATFCYTSGTTGNPKGALIRHVNMVSDAAGCYAMGLAHCTPDEVYFSYLPLPHIFERQVQVAVFCGGAPVGFWRNNPLELVADMAALRPVLMPAVPRVLNRLHDKITHGMLAAGGLKARLFVRACEAKVRGLHNGTNKHALWDRLIFAKLRAALGMDRLRLVVTGSAPIAPHVLTFMRILLGCDLIEGYGQTETCAGATITMPGDFSAGHVGGPFPCTEICLMDVPEMGYLHTDSWHGGDPREGGGGGEPCAGRGEICFRGTNVFAGYYKDPEKTAEAIDADGWLHSGDIGLWTADGALRII-DRKKNIFKLSQ 560
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9418.17465.1 vs.
Match: Long-chain-fatty-acid--CoA (ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZHK7_TRICV)

HSP 1 Score: 451 bits (1161), Expect = 7.190e-152
Identity = 233/416 (56.01%), Postives = 294/416 (70.67%), Query Frame = 1 
Query:    1 TVPLYDTLGPETVEFVVNQTSLTTVVCSGVAELRKLVAIADGGRCPSLQTVVVMDGISERERREAVRAGLRVYAFAEVEGIGA----AHAHPHRPPGPNDLATFCYTSGTTGNPKGALLTHRNFIADAAAAELMETFNADST-DVYLSYLPLPHIFERMVQVAIFNVGAAVGSFRGDPTLLVEDMQALRPTLMAAVPRVLNRLHDKIVQGMLAAGGLKTKLFVKACEAKVQGLHEGRLTHALWDKLVFGKVKAALGLDRIKMMVTGSAPVAAHVLTFMRILVGVPLLEGYGQTETTAGATMTQSGDF-SVGHVGGPFSCTEICLKDVPEMGYRHTDSWHGGDPRDAGGGGEACEGRGEICFRGCSVFVGYYKDDEKTRDAFDENGWLLSGDIGMWNSDGALKIIADRKKNIFKLSQ 1230
            TVP YDTLGP TVEF++NQT    VVCS  AEL++L      G CPS +T V++DG+       A  AG+ V +FA+VE +GA    +  H H PP   D+ATFCYTSGTTGNPKGAL+TH NF++  AA   M+T     T D +LSY+PLPHIFER++Q  IF++GA++G FRGDPTLL+ED+QA RPT+M A PRVLN+++DKI  G+ AAGG+K  LF  A +AK + L  G+L H L+D L+F K+KAALGLD ++ MV+GSAP++  V+ F R ++GVP++EGYGQTE TA AT+    D  S+GHVGGP    EI L DVPEMGY HTD+ HGG P         C GRGEI  RG +VF GYYKD+EKT++  +E GWL+SGD+G+W   G L II DRKKNIFKLSQ
Sbjct:   46 TVPFYDTLGPTTVEFILNQTGTPCVVCSR-AELQRLCEAKGTGNCPSFRTAVLVDGVIPESASLAKSAGIDVVSFAKVEAVGAQSMSSGRHVHSPPSGADVATFCYTSGTTGNPKGALITHENFVSTVAA---MQTHMKGVTNDRHLSYMPLPHIFERILQAQIFSIGASIGFFRGDPTLLIEDLQACRPTIMIAAPRVLNKIYDKITNGINAAGGMKKALFDMALKAKTENLMHGQLKHGLYDHLIFNKIKAALGLDHVRQMVSGSAPLSETVMIFFRCMMGVPIVEGYGQTEGTAAATLGADDDMGSIGHVGGPLDHLEILLADVPEMGYLHTDTSHGGRP---------CCGRGEIWIRGPNVFKGYYKDEEKTKETINEEGWLMSGDVGLWTPQGQLMII-DRKKNIFKLSQ 447
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9418.17465.1 vs.
Match: Long-chain-fatty-acid--CoA (ligase n=2 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBL9_THAPS)

HSP 1 Score: 447 bits (1149), Expect = 6.190e-149
Identity = 224/415 (53.98%), Postives = 287/415 (69.16%), Query Frame = 1 
Query:    1 TVPLYDTLGPETVEFVVNQTSLTTVVCSGVAELRKLVAIADGGRCPSLQTVVVMDGISERERREAVRAGLRVYAFAEVEGIGA----AHAHPHRPPGPNDLATFCYTSGTTGNPKGALLTHRNFIADAAAAELMETFNADSTDVYLSYLPLPHIFERMVQVAIFNVGAAVGSFRGDPTLLVEDMQALRPTLMAAVPRVLNRLHDKIVQGMLAAGGLKTKLFVKACEAKVQGLHEGRLTHALWDKLVFGKVKAALGLDRIKMMVTGSAPVAAHVLTFMRILVGVPLLEGYGQTETTAGATMTQSGDF-SVGHVGGPFSCTEICLKDVPEMGYRHTDSWHGGDPRDAGGGGEACEGRGEICFRGCSVFVGYYKDDEKTRDAFDENGWLLSGDIGMWNSDGALKIIADRKKNIFKLSQ 1230
            TVP YDTLGP+TV F++  T ++ VVCS   EL +L      G CP   +V+++DG++ +    A  AGL+V +FA++E +GA       H H PP P D+ATFCYTSGTTG+PKGAL+TH N ++       +       TD ++SYLPLPHIFER+V   +   GA++  FRGDP LL+ED+ A RPT++  VPRVLN++HDKIV GM A GG+  KLF  A EAK  GL EGRL H LWD+++F K+K ALGLD +++MV+GSAP++  V+ F R L+GVP++EGYGQTE  A AT++   D  SVGHVGGP  C EI L+DVPEMGY  TD+ H G+P         C GRGEIC RG +VF GYYKD+EKT++  DE GWL SGD+G+W  DG LKII DRKKNIFKL+Q
Sbjct:  135 TVPFYDTLGPDTVRFILEHTGMSCVVCSR-KELERLCEAKKSGTCPKFHSVILVDGVTAQATDMANGAGLKVVSFAKIEALGAQIVPTEGHKHTPPDPKDIATFCYTSGTTGDPKGALITHENIMSAVGGLNEIPIL---PTDRHISYLPLPHIFERVVVAQMLTSGASIAFFRGDPLLLIEDIVACRPTMVPMVPRVLNKIHDKIVAGMAAKGGVTEKLFKMAMEAKTLGLQEGRLKHPLWDRILFNKIKRALGLDCVRLMVSGSAPLSPKVMIFFRCLLGVPVMEGYGQTEGAAAATISHPDDIASVGHVGGPTDCVEIVLEDVPEMGYLSTDTSHNGEP---------CRGRGEICIRGPNVFKGYYKDEEKTKETIDEEGWLHSGDVGLWMPDGQLKII-DRKKNIFKLAQ 535
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9418.17465.1 vs.
Match: Long-chain-fatty-acid--CoA (ligase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UI66_9STRA)

HSP 1 Score: 446 bits (1147), Expect = 1.360e-148
Identity = 229/415 (55.18%), Postives = 286/415 (68.92%), Query Frame = 1 
Query:    1 TVPLYDTLGPETVEFVVNQTSLTTVVCSGVAELRKLVAIADGGRCPSLQTVVVMDGISERERREAVRAGLRVYAFAEVEGIGAAHA----HPHRPPGPNDLATFCYTSGTTGNPKGALLTHRNFIADAAAAELMETFNADSTDVYLSYLPLPHIFERMVQVAIFNVGAAVGSFRGDPTLLVEDMQALRPTLMAAVPRVLNRLHDKIVQGMLAAGGLKTKLFVKACEAKVQGLHEGRLTHALWDKLVFGKVKAALGLDRIKMMVTGSAPVAAHVLTFMRILVGVPLLEGYGQTETTAGATMTQSGDF-SVGHVGGPFSCTEICLKDVPEMGYRHTDSWHGGDPRDAGGGGEACEGRGEICFRGCSVFVGYYKDDEKTRDAFDENGWLLSGDIGMWNSDGALKIIADRKKNIFKLSQ 1230
            TVPLYDTLGPETV+FV+ QT ++ VVC+  AEL  L      G+CP  Q V+++DG+     R+A   GL + +FA+VE +GA       H H+PP   DLATFCYTSGTTGNPKGAL+TH N +++ A   + + F     D +LSYLPLPHIFERMV   I   G+++  +RGDP LL+ED+QA RPTLM A PRVLN++HDKI  GM+AAGG K ++F     AK +GL  G L HAL+D L+F K+K ALGLD ++ MV+GSAP++  V+TF R ++GVP++EGYGQTE TAGAT+    D  S GHVGGP  CTE+ L DVPEMGY HTD  H   P         C GRGEI  RG +VF GYYK+ EKT++A DE GWL SGDIG+W   G L+II DRKK IFKL+Q
Sbjct:  134 TVPLYDTLGPETVQFVLEQTGMSAVVCTR-AELAHLCEAKATGQCPKFQHVILVDGVIPEAARQAKLVGLHLVSFAKVEAVGAQSTAISKHKHKPPSGKDLATFCYTSGTTGNPKGALITHENIVSNIAG--MHQLFQPQPLDRHLSYLPLPHIFERMVVSQILLAGSSIAFYRGDPLLLIEDIQACRPTLMPAAPRVLNKIHDKIQAGMMAAGGAKKRIFDAGLAAKTEGLKHGHLKHALYDPLIFNKLKKALGLDHVRFMVSGSAPLSVSVMTFYRCMLGVPVVEGYGQTEGTAGATVGHIEDMGSNGHVGGPTPCTEVVLLDVPEMGYLHTDRMHRDQP---------CRGRGEILIRGPNVFAGYYKEPEKTKEAIDEEGWLHSGDIGLWTLQGQLQII-DRKKEIFKLAQ 535
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9418.17465.1 vs.
Match: Long-chain-fatty-acid--CoA (ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDD9_9STRA)

HSP 1 Score: 444 bits (1142), Expect = 7.230e-148
Identity = 230/412 (55.83%), Postives = 285/412 (69.17%), Query Frame = 1 
Query:    1 TVPLYDTLGPETVEFVVNQTSLTTVVCSGVAELRKLVAIADGGRCPSLQTVVVMDGISERERREAVRAGLRVYAFAEVEGIGAAHAH--PHRPPGPNDLATFCYTSGTTGNPKGALLTHRNFIADAAAAELMETFNADSTDVYLSYLPLPHIFERMVQVAIFNVGAAVGSFRGDPTLLVEDMQALRPTLMAAVPRVLNRLHDKIVQGMLAAGGLKTKLFVKACEAKVQGLHEGRLTHALWDKLVFGKVKAALGLDRIKMMVTGSAPVAAHVLTFMRILVGVPLLEGYGQTETTAGATMTQSGDFSVGHVGGPFSCTEICLKDVPEMGYRHTDSWHGGDPRDAGGGGEACEGRGEICFRGCSVFVGYYKDDEKTRDAFDENGWLLSGDIGMWNSDGALKIIADRKKNIFKLSQ 1230
            TVPLYDTLG +TVE+++ QT   TVVC   AE+  ++A+A    CP L  VV ++  +E     A   G+ + +F E+E  G       PH PP P  +ATFCYTSGTTG+PKGALLTH++ IA  A+ E       DS D++ SYLPLPH+FER+VQV IF  GAAVG ++G+P  LVED+QALRPT+  +VPRVLNR++DKI+ G+ AAGG K  LF +A  +KV+GL  G+L H LWD+L+F  VKA LGLDR+K+M TGSAP+A  VL F R ++G  + EGYGQTE  A AT+T  GDFS GHVG P  C EI L DVP+MGYRHTD+WHGGD       G  C GRGEI +RG   F GYYK  EKT +  D++GWL SGDIG+W   G LKII DRKKNIFKL+Q
Sbjct:  129 TVPLYDTLGADTVEYILLQTGAPTVVCGTPAEVASVLAVA--AACPRLGLVVCVEPFTEELVGTARSKGVALVSFDELESEGRRMLRRLPHSPPSPGCVATFCYTSGTTGSPKGALLTHQSLIASVASVEQAGILELDSEDIHFSYLPLPHVFERLVQVNIFASGAAVGFYQGNPLKLVEDLQALRPTIFPSVPRVLNRIYDKIMAGVAAAGGSKEALFRRALASKVEGLRRGQLKHWLWDRLIFNTVKAGLGLDRLKVMATGSAPIAPPVLDFFRCMLGCDVFEGYGQTEGCAAATITAPGDFSSGHVGPPVPCVEIKLIDVPDMGYRHTDTWHGGDQD-----GMPCVGRGEIVYRGPVAFTGYYKMPEKTAETIDKDGWLYSGDIGLWTLSGNLKII-DRKKNIFKLAQ 532
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9418.17465.1 vs.
Match: Precursor (of ligase long chain acyl-coa ligase n=5 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ93_PHATC)

HSP 1 Score: 437 bits (1124), Expect = 4.050e-145
Identity = 227/415 (54.70%), Postives = 286/415 (68.92%), Query Frame = 1 
Query:    4 VPLYDTLGPETVEFVVNQTSLTTVVCSGVAELRKLVAIADGGRCPSLQTVVVMDGISERERREAVRAGLRVYAFAEVEGIGAA----HAHPHRPPGPNDLATFCYTSGTTGNPKGALLTHRNFI-ADAAAAELMETFNADSTDVYLSYLPLPHIFERMVQVAIFNVGAAVGSFRGDPTLLVEDMQALRPTLMAAVPRVLNRLHDKIVQGMLAAGGLKTKLFVKACEAKVQGLHEGRLTHALWDKLVFGKVKAALGLDRIKMMVTGSAPVAAHVLTFMRILVGVPLLEGYGQTETTAGATMTQSGDFS-VGHVGGPFSCTEICLKDVPEMGYRHTDSWHGGDPRDAGGGGEACEGRGEICFRGCSVFVGYYKDDEKTRDAFDENGWLLSGDIGMWNSDGALKIIADRKKNIFKLSQ 1230
            V +YDTLGP+TV F+++QTS  +VVC+  AEL KL      G+CP+    +++DG++E   + A+ AGL V +FA+VE +GA       H HRPP P D+A FCYTSGTTGNPKGALLTH N + A A     +    A   D +LSYLPL HIFER+V   +F  GA+V  FRGDPTLL+EDMQA RPT+M   PRVLN+++DKI  G+ + GGLK KLF  A  AK +GL  G + HAL+D+L+F K+K  LG+D+++MMV+GSAP+   V+TF R ++ +P++EGYGQTE  A AT+  S D + VGHVGGP    EI L DVPEMGY HTD+ H G          AC+GRGEIC RG SVF GYYKDD  TR+  D  GWL SGD+G+W  DG L+II DRKKNIFKLSQ
Sbjct:  133 VLMYDTLGPDTVTFILDQTSARSVVCTR-AELPKLCESKVSGKCPAFTAAILVDGVTEDAAKMALEAGLEVLSFAKVEAVGAVCIAEKGHHHRPPAPTDVAAFCYTSGTTGNPKGALLTHENIMSAIAGFYGAVGDLEAQPFDRHLSYLPLAHIFERIVSSQMFCAGASVAFFRGDPTLLIEDMQACRPTVMPVAPRVLNKIYDKIQAGISSVGGLKKKLFDAAVAAKAEGLQSGHMKHALYDRLIFNKIKKGLGMDQLRMMVSGSAPLNDTVMTFFRCMLAIPVVEGYGQTEGAAAATIGSSDDMATVGHVGGPVGSVEIVLVDVPEMGYFHTDTLHRG---------MACQGRGEICVRGPSVFKGYYKDDLNTRETIDNEGWLHSGDVGLWRPDGNLQII-DRKKNIFKLSQ 536
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9418.17465.1 vs.
Match: Long-chain-fatty-acid--CoA (ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLC6_FISSO)

HSP 1 Score: 435 bits (1118), Expect = 5.830e-144
Identity = 221/417 (53.00%), Postives = 293/417 (70.26%), Query Frame = 1 
Query:    1 TVPLYDTLGPETVEFVVNQTSLTTVVCSGVAELRKLVAIADGG-RCP-SLQTVVVMDGISERERREAVRAGLRVYAFAEVEGIGA----AHAHPHRPPGPNDLATFCYTSGTTGNPKGALLTHRNFIADAAAAELMETFNADSTDVYLSYLPLPHIFERMVQVAIFNVGAAVGSFRGDPTLLVEDMQALRPTLMAAVPRVLNRLHDKIVQGMLAAGGLKTKLFVKACEAKVQGLHEGRLTHALWDKLVFGKVKAALGLDRIKMMVTGSAPVAAHVLTFMRILVGVPLLEGYGQTETTAGATMTQSGDFS-VGHVGGPFSCTEICLKDVPEMGYRHTDSWHGGDPRDAGGGGEACEGRGEICFRGCSVFVGYYKDDEKTRDAFDENGWLLSGDIGMWNSDGALKIIADRKKNIFKLSQ 1230
            TVPLYDTLGP+TV FV++QT   +VVC+  AE+  L  + D   + P   QT++V+DG++     +A RAGL + ++A+VE +GA       H HRPP P D+ATFCYTSGTTG+PKGALLTH N ++  A           + D +LSYLPL HIFER V   +F  GA+V  FRGDPTLL+ED+QA RPTL+ A PRVLN+++DKI  G+ AAGG+K+KLF  A  AK +GL +G L HAL+D+L+F K+K  LG+D +++M++GSAP++ +V+TF R ++G+P++EGYGQTE  A  T++   D S VGHVG P    EI L +VPEMGY H+D  H G         + C GRGEIC RG S+F GYYK ++KT++A DE+GWL SGD+GMW  DG+L+II DRKKNIFKL+Q
Sbjct:  149 TVPLYDTLGPDTVRFVLHQTEAQSVVCTR-AEVEALCRVKDASDKVPVHFQTIIVIDGVTPEVADQAGRAGLEIISYAKVEAVGAHRIATQGHRHRPPQPGDIATFCYTSGTTGDPKGALLTHENMVSSMAGISQFPEVAIRTDDRHLSYLPLAHIFERTVISQVFLAGASVAFFRGDPTLLIEDLQACRPTLLPAAPRVLNKIYDKITTGVAAAGGMKSKLFNAALAAKTEGLKKGHLHHALYDRLIFSKIKKGLGMDYLRVMISGSAPLSENVMTFFRCMLGIPVVEGYGQTEGAASGTISHPDDISTVGHVGCPVGSVEIVLMNVPEMGYLHSDREHRG---------QKCYGRGEICLRGPSIFKGYYKAEDKTKEAIDEDGWLHSGDVGMWRQDGSLQII-DRKKNIFKLAQ 554
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9418.17465.1 vs.
Match: Long-chain-fatty-acid--CoA (ligase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VYZ7_9STRA)

HSP 1 Score: 434 bits (1115), Expect = 9.430e-144
Identity = 222/414 (53.62%), Postives = 288/414 (69.57%), Query Frame = 1 
Query:    1 TVPLYDTLGPETVEFVVNQTSLTTVVCSGVAELRKLVAIADGGRCPSLQTVVVMDGISERERREAVRAGLRVYAFAEVEGIGA----AHAHPHRPPGPNDLATFCYTSGTTGNPKGALLTHRNFIADAAAAELMETFNADSTDVYLSYLPLPHIFERMVQVAIFNVGAAVGSFRGDPTLLVEDMQALRPTLMAAVPRVLNRLHDKIVQGMLAAGGLKTKLFVKACEAKVQGLHEGRLTHALWDKLVFGKVKAALGLDRIKMMVTGSAPVAAHVLTFMRILVGVPLLEGYGQTETTAGATMTQSGDF-SVGHVGGPFSCTEICLKDVPEMGYRHTDSWHGGDPRDAGGGGEACEGRGEICFRGCSVFVGYYKDDEKTRDAFDENGWLLSGDIGMWNSDGALKIIADRKKNIFKLS 1227
            TVP YDTLGPETV+F++  T +  VVC+  AEL +L +    G+CP  + V+++DG++      A  AGL V +FA+VE +GA       H H PP  +D+ATFCYTSGTTGNPKGAL+TH N ++  A   + +  + +  D ++SYLPLPHIFER+V   +F  GA+V  +RG P  LVED+ A RPT+M A PRVLN++HDKI+ GM AAGG+K ++F     AK +GL  G+LTH L+D L+F K+K ALG+D I+ +V GSAP++  V+TF R L+GVP++EGYGQTE TA AT+    DF S+GHVGGP +  EI L DVPEMGY HTD+ H G P         C GRGEIC RG +VF GYYKD+EKTR+  DE GWL SGD+G+W  +G L+II DRKKNIFKL+
Sbjct:  143 TVPFYDTLGPETVQFMLTHTDMACVVCTR-AELPRLCSAKKTGKCPKFRAVILVDGVTPDATSMAKEAGLDVVSFAKVEAVGAQLVATEGHKHNPPSGHDVATFCYTSGTTGNPKGALITHENVMSTIAG--MPDGVDVEPFDRHISYLPLPHIFERVVINQMFLNGASVAFYRGKPEYLVEDIIACRPTMMIAAPRVLNKIHDKIMGGMEAAGGMKKRIFDAGLAAKREGLQHGKLTHGLYDALIFNKIKKALGMDCIRALVCGSAPLSDGVMTFFRCLLGVPIMEGYGQTEGTAAATIGDKDDFASIGHVGGPTAAVEIVLMDVPEMGYLHTDTSHQGQP---------CRGRGEICVRGPNVFKGYYKDEEKTRETIDEEGWLHSGDVGLWTLNGQLRII-DRKKNIFKLA 543
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9418.17465.1 vs.
Match: Long-chain-fatty-acid--CoA (ligase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MGH8_9STRA)

HSP 1 Score: 428 bits (1101), Expect = 1.170e-141
Identity = 222/414 (53.62%), Postives = 285/414 (68.84%), Query Frame = 1 
Query:    1 TVPLYDTLGPETVEFVVNQTSLTTVVCSGVAELRKLVAIADGGRCPSLQTVVVMDGISERERREAVRAGLRVYAFAEVEGIGA----AHAHPHRPPGPNDLATFCYTSGTTGNPKGALLTHRNFIADAAAAELMETFNADSTDVYLSYLPLPHIFERMVQVAIFNVGAAVGSFRGDPTLLVEDMQALRPTLMAAVPRVLNRLHDKIVQGMLAAGGLKTKLFVKACEAKVQGLHEGRLTHALWDKLVFGKVKAALGLDRIKMMVTGSAPVAAHVLTFMRILVGVPLLEGYGQTETTAGATMTQSGDF-SVGHVGGPFSCTEICLKDVPEMGYRHTDSWHGGDPRDAGGGGEACEGRGEICFRGCSVFVGYYKDDEKTRDAFDENGWLLSGDIGMWNSDGALKIIADRKKNIFKLS 1227
            TVP YDTLGPETV+F++  T +  VVC+   EL++LV     G CP  + V+++DG++      A  A L V +FA+VE +GA       H H PP   D+ATFCYTSGTTGNPKGAL+TH N ++  A   + +    ++ D +LSYLPLPHIFER+V   +F  GA+V  +RG P  LVED+ A RPT+M A PRVLN++HDKI+ G+ AAGG K  LF  A  AK + L +G+LTH L+D L+F K+K ALG+D ++ +V+GSAP++  V+TF R ++GVP+LEGYGQTE TA AT++   D  SVGHVGGP +  EI L DVPEMGY HTD+ H G P         C GRGEIC RG +VF GYYKD+EKTR+  DE GWL SGD+G+W  DG L+II DRKKNIFKL+
Sbjct:  135 TVPFYDTLGPETVQFMLTHTDMACVVCTR-EELKRLVEAKKTGLCPKFRAVILVDGVTPDAADMAQDAELNVLSFAKVEAVGAQLISTEGHKHNPPSGTDVATFCYTSGTTGNPKGALITHENLLS--AIDGMPDDMQTEAYDRHLSYLPLPHIFERLVINDMFLKGASVAFYRGKPEFLVEDIIACRPTVMIAAPRVLNKIHDKIMGGINAAGGFKKNLFDAALAAKRENLKQGKLTHGLYDALIFHKIKKALGMDHVRYLVSGSAPLSDTVMTFFRSMLGVPVLEGYGQTEGTAAATISHPDDMTSVGHVGGPTNVVEIVLIDVPEMGYLHTDTSHQGKP---------CRGRGEICIRGPNVFKGYYKDEEKTRETIDEEGWLHSGDVGLWTPDGQLRII-DRKKNIFKLA 535
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9418.17465.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Long-chain-fatty-acid--CoA1.070e-28795.61ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
Long2.350e-19968.93chain acyl-CoA synthetase n=1 Tax=Tribonema minus ... [more]
Long-chain-fatty-acid--CoA7.190e-15256.01ligase n=1 Tax=Trieres chinensis TaxID=1514140 Rep... [more]
Long-chain-fatty-acid--CoA6.190e-14953.98ligase n=2 Tax=Thalassiosira pseudonana TaxID=3512... [more]
Long-chain-fatty-acid--CoA1.360e-14855.18ligase n=1 Tax=Attheya septentrionalis TaxID=42027... [more]
Long-chain-fatty-acid--CoA7.230e-14855.83ligase n=1 Tax=Rhizochromulina marina TaxID=103483... [more]
Precursor4.050e-14554.70of ligase long chain acyl-coa ligase n=5 Tax=Phaeo... [more]
Long-chain-fatty-acid--CoA5.830e-14453.00ligase n=2 Tax=Fistulifera solaris TaxID=1519565 R... [more]
Long-chain-fatty-acid--CoA9.430e-14453.62ligase (Fragment) n=1 Tax=Ditylum brightwellii Tax... [more]
Long-chain-fatty-acid--CoA1.170e-14153.62ligase n=1 Tax=Helicotheca tamesis TaxID=374047 Re... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9418contigE_fasciculatus_S2_contig9418:2..5527 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score452.6
Seed ortholog evalue2e-124
Seed eggNOG ortholog35128.Thaps29867
Preferred nameACSL6
Model size1248
KEGG rclassRC00004,RC00014
KEGG koko:K01897
KEGG TC4.C.1.1
KEGG ReactionR01280
KEGG Pathwayko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920
KEGG ModuleM00086
Hectar predicted targeting categoryother localisation
GOsGO:0000302,GO:0001101,GO:0001666,GO:0001676,GO:0001932,GO:0001934,GO:0003674,GO:0003824,GO:0003987,GO:0004467,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005777,GO:0005778,GO:0005783,GO:0005789,GO:0005886,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006638,GO:0006639,GO:0006641,GO:0006644,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006805,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006950,GO:0006970,GO:0006979,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007399,GO:0007405,GO:0007584,GO:0008150,GO:0008152,GO:0008283,GO:0008610,GO:0008654,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009410,GO:0009605,GO:0009628,GO:0009629,GO:0009651,GO:0009719,GO:0009725,GO:0009743,GO:0009744,GO:0009746,GO:0009749,GO:0009755,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010193,GO:0010243,GO:0010562,GO:0010565,GO:0010604,GO:0010646,GO:0010720,GO:0010746,GO:0010747,GO:0010866,GO:0010867,GO:0010876,GO:0010941,GO:0010975,GO:0010976,GO:0012505,GO:0014070,GO:0015645,GO:0015711,GO:0015718,GO:0015849,GO:0015908,GO:0015909,GO:0016020,GO:0016053,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0017144,GO:0018130,GO:0019216,GO:0019217,GO:0019220,GO:0019221,GO:0019222,GO:0019432,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0019867,GO:0019899,GO:0022008,GO:0023051,GO:0023052,GO:0030154,GO:0030182,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031344,GO:0031346,GO:0031399,GO:0031401,GO:0031667,GO:0031903,GO:0031956,GO:0031957,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0031998,GO:0032000,GO:0032268,GO:0032270,GO:0032368,GO:0032370,GO:0032501,GO:0032502,GO:0032787,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032890,GO:0032892,GO:0033036,GO:0033211,GO:0033559,GO:0033674,GO:0033865,GO:0033866,GO:0033875,GO:0033993,GO:0034030,GO:0034032,GO:0034033,GO:0034097,GO:0034201,GO:0034284,GO:0034285,GO:0034641,GO:0034654,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035336,GO:0035337,GO:0035338,GO:0035383,GO:0035384,GO:0036109,GO:0036293,GO:0036314,GO:0042175,GO:0042178,GO:0042221,GO:0042325,GO:0042327,GO:0042493,GO:0042579,GO:0042802,GO:0042803,GO:0042981,GO:0043067,GO:0043085,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043269,GO:0043270,GO:0043434,GO:0043436,GO:0043549,GO:0043603,GO:0043604,GO:0043651,GO:0044070,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044432,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044539,GO:0045017,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045834,GO:0045859,GO:0045860,GO:0045923,GO:0045937,GO:0046320,GO:0046321,GO:0046390,GO:0046394,GO:0046460,GO:0046463,GO:0046483,GO:0046486,GO:0046677,GO:0046889,GO:0046890,GO:0046942,GO:0046949,GO:0046983,GO:0048468,GO:0048518,GO:0048522,GO:0048545,GO:0048583,GO:0048666,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0050994,GO:0050996,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051716,GO:0051960,GO:0051962,GO:0055086,GO:0060255,GO:0060284,GO:0061351,GO:0062012,GO:0062013,GO:0065007,GO:0065009,GO:0070013,GO:0070482,GO:0070542,GO:0070723,GO:0070887,GO:0071310,GO:0071345,GO:0071375,GO:0071417,GO:0071466,GO:0071495,GO:0071616,GO:0071702,GO:0071704,GO:0071900,GO:0071902,GO:0071944,GO:0072089,GO:0072330,GO:0072521,GO:0072522,GO:0080090,GO:0090207,GO:0090208,GO:0090407,GO:0097305,GO:0098588,GO:0098805,GO:0098827,GO:0120035,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1903793,GO:1903959,GO:1903961,GO:1905952,GO:1905954,GO:2000026,GO:2000191,GO:2000193,GO:2001233,GO:2001236
Exons10
EggNOG free text desc.AMP-binding enzyme
EggNOG OGs2XERM@2836,COG1022@1,KOG1256@2759
Ec32 ortholog descriptionlong chain acyl-coA synthetase
Ec32 orthologEc-01_001560.1
EC6.2.1.3
Cds size1248
COG Functional cat.I
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9418.17465.1prot_E_fasciculatus_S2_contig9418.17465.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9418 2..5527 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842591.2092676-CDS-E_fasciculatus_S2_contig9418:1..1481696842591.2092676-CDS-E_fasciculatus_S2_contig9418:1..148Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9418 2..148 +
1696842591.2232826-CDS-E_fasciculatus_S2_contig9418:730..8881696842591.2232826-CDS-E_fasciculatus_S2_contig9418:730..888Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9418 731..888 +
1696842591.2389307-CDS-E_fasciculatus_S2_contig9418:1638..18011696842591.2389307-CDS-E_fasciculatus_S2_contig9418:1638..1801Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9418 1639..1801 +
1696842591.2501385-CDS-E_fasciculatus_S2_contig9418:2138..22131696842591.2501385-CDS-E_fasciculatus_S2_contig9418:2138..2213Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9418 2139..2213 +
1696842591.2599142-CDS-E_fasciculatus_S2_contig9418:2832..29611696842591.2599142-CDS-E_fasciculatus_S2_contig9418:2832..2961Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9418 2833..2961 +
1696842591.2726722-CDS-E_fasciculatus_S2_contig9418:3447..35161696842591.2726722-CDS-E_fasciculatus_S2_contig9418:3447..3516Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9418 3448..3516 +
1696842591.2893233-CDS-E_fasciculatus_S2_contig9418:3905..40151696842591.2893233-CDS-E_fasciculatus_S2_contig9418:3905..4015Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9418 3906..4015 +
1696842591.3001552-CDS-E_fasciculatus_S2_contig9418:4420..46251696842591.3001552-CDS-E_fasciculatus_S2_contig9418:4420..4625Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9418 4421..4625 +
1696842591.3098667-CDS-E_fasciculatus_S2_contig9418:4935..50741696842591.3098667-CDS-E_fasciculatus_S2_contig9418:4935..5074Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9418 4936..5074 +
1696842591.3200758-CDS-E_fasciculatus_S2_contig9418:5474..55271696842591.3200758-CDS-E_fasciculatus_S2_contig9418:5474..5527Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9418 5475..5527 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9418.17465.1

>prot_E_fasciculatus_S2_contig9418.17465.1 ID=prot_E_fasciculatus_S2_contig9418.17465.1|Name=mRNA_E_fasciculatus_S2_contig9418.17465.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=416bp
TVPLYDTLGPETVEFVVNQTSLTTVVCSGVAELRKLVAIADGGRCPSLQT
VVVMDGISERERREAVRAGLRVYAFAEVEGIGAAHAHPHRPPGPNDLATF
CYTSGTTGNPKGALLTHRNFIADAAAAELMETFNADSTDVYLSYLPLPHI
FERMVQVAIFNVGAAVGSFRGDPTLLVEDMQALRPTLMAAVPRVLNRLHD
KIVQGMLAAGGLKTKLFVKACEAKVQGLHEGRLTHALWDKLVFGKVKAAL
GLDRIKMMVTGSAPVAAHVLTFMRILVGVPLLEGYGQTETTAGATMTQSG
DFSVGHVGGPFSCTEICLKDVPEMGYRHTDSWHGGDPRDAGGGGEACEGR
GEICFRGCSVFVGYYKDDEKTRDAFDENGWLLSGDIGMWNSDGALKIIAD
RKKNIFKLSQVRARP*
back to top

mRNA from alignment at E_fasciculatus_S2_contig9418:2..5527+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9418.17465.1 ID=mRNA_E_fasciculatus_S2_contig9418.17465.1|Name=mRNA_E_fasciculatus_S2_contig9418.17465.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5526bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9418:2..5527+ (Ectocarpus fasciculatus EfasUO2)
ACCGTGCCTCTCTACGACACGCTCGGGCCGGAGACCGTTGAGTTCGTGGT
AAACCAGACAAGCCTCACGACGGTCGTGTGTTCTGGCGTAGCGGAACTCC
GGAAACTGGTGGCCATTGCGGATGGGGGCCGATGCCCGTCGCTGCAGGTG
CCCAAGCACAGCGGTTGTCTCTTGGTTCCCTTGGGCGGTCGGTTGTGGGC
GCCGCAAAAGGGCTGTTTGTGCTTGTCATGCGAAGGCTGGGGTTGGTCGT
GTTGATGCGTGTGCTGCGTGTGTGTTTCTTTGTTATTTGCACCGACCTCT
CTAACCGGCTGAATGTGTGTGTTGGTGTCTGTGTTTAGTTTTTGTATTGT
ATGTTTTTTATGAGTGGTGCTGTCTCGCACGAACAGTCCCGTCGACCAGG
GACACGCAGCCACCGACGGTACACAGCCATGTCAAAGGCGTATATGCTTG
TAGTGAGGTTGCAATAACACGTTGCCAAATCCTCCTCAGCCGTTTTGTTT
TTTGTCGATCTTGCCTCTACCCTCCTTGTCTTCCCACAAACCGACGCGTG
AATATGCCATGCCAAACCCTACGTCAGCAGTCTCTCTCCTTCCAGCCCCA
GCCCCTATCCCCTCAACCACCAACAGCCCCTCCGCCGTCCCTTCTGAAAC
CCCGACCCCTAACGATTAACAACCCCGTTCGGAACTTTCCTTCTGTATTG
ACGCCCCGTGCCCATGCCACTTCGCCCAGACCGTGGTGGTGATGGACGGC
ATCAGCGAGAGGGAGAGGAGAGAGGCCGTGCGCGCAGGTCTACGGGTGTA
CGCCTTCGCGGAGGTGGAGGGGATAGGGGCCGCACACGCTCACCCGCACC
GCCCACCGGGGCCCAACGACCTGGCCACGTTCTGCTAGTGAGTTTATTTT
TCCGGTTCGGGCGTCTTGTGCACATGGGATATTCTCTCGCTCTCCCTCTC
CATCTCTTCCTTTGCTGCCCTCCCTCTCTCTCAACTCTCATCTATTGTAT
CTATCTCTTCCTTTGCTGCCTTCCCCGCAAGATGTGACTACTGCTGCTCT
GGTTATCACGCGAGTGGCCGTTTCGGCAATCCAACTCGATATTTTACTTA
GACCCACACGCGAACCACACGCGAACGCCTATACTCTCATGCTGCTGGAG
AGGAGGTGACACGATCCCCTCCATGCACCCCACCCTGTATGCCCCGTCCC
GGCTGCGATTGCGAGGACTATGTTCGTCTAGGCAGAACATAATATCACCC
CCCTCATCCCCATGCGCTTCCCGTACGCTGATGTTGAGTCGTCGTTTTAT
ATCCTTTTCTCTACTTTTGTTTTCCTACCGACTCAAAAGGTATTGCGTGT
ATACAGTTCTATGCAGGCACTGCATAACGAAGGCGGATGAAGAAAACTTG
AAGGGTTCGTGCGTGAGGTTCCTCCTTCATGACCATGGTTGCTGCGTCTA
ACATTTAATTACCGCAACGTGTACAACACGGACGCCCAGATATATATGGG
ATGATAACGCACCCCGCTACTTCTTCCCAAACATAATTTTTTCGAGAGCT
CTGCTTCGACCACGATCGATAGTTCTCCTCTCAAAACAACGGCCCCGCCA
CACGGACGACGATTCCCCCCCCGCCCCCGCTCTCCAGCACGTCGGGAACG
ACCGGAAACCCCAAGGGGGCGTTGCTGACCCACCGCAACTTCATCGCGGA
CGCGGCGGCGGCGGAGTTGATGGAGACGTTCAACGCCGACTCGACGGACG
TGTACCTGTCGTACCTGCCGCTCCCCCACATCTTCGAGCGGATGGTGCAG
GTGTGACGGACGAGGGAGGAGCGTAGTGTGTGTTCGTCGCCACGCATGGC
GGTAGACTGCAAGCAGGTGGCCCGGCATCCCTTCAGGGGGTGCGGACAAT
GGCGGGTTTCACGATCAGACGGGGGAGGTCTAATAGGGCCGGGGTTTGTT
GCTTTTTGGGAGCGTTTGGGGTTTGTTCCTGCCTTTTGTTTTGTCTCTCC
AAGATGTTTTTCTGCGTTTTGTAGTGCCACTGCTACCCTGTGGCTTCATT
TTGAGCCCGAGGTATACAAAAACATGCGTGTGTGAGGCTCACTCACTGCG
TTTCGGCGGCAATGGTGTGTTTCGTTTGCTAAACAAGGTGGCCATTTTCA
ACGTGGGTGCGGCTGTGGGCAGTTTCCGGGGCGATCCTACCCTGCTGGTA
GAAGACATGCAGGTAATGCCGTTGCTGCCATTTGTGGCCAATTTATCTGC
CGTTCTGGCAGCCATCTGCACGTTTTCTCCCACACTGATTCGACAGGTAT
ACTGAAAAAACAGCGAACCAGCGAAAACGCATGCAATGCAGCCGTGTGCA
CAGTTTCGTGTTTCGTGTTTTATACAACGGGCGCACCTCATGCGCCCTTT
CGCTGGAAATTGTGGAAATAGTGAATCGGTCACTTGCGTGTTGCTTTCAA
GTACCATGTATTAACTCGTACACAATCGTACATCAGCAGAAACCCTTTCC
TCGCCCCGCTCAGACCTTCCTAATCCCGGGGACCTCCCCTCGTCATCTCA
CGGGGTCACCCAAACGTCGTGTGGTCGATTCATGTATTATGTACGGAGGG
GGCTGCTGATAGGGGACTCGCCGCTCCCCTTGGTCGCTGCGCTTCCCATC
CATCTCCACAACAAGAAAACTCCTCCTGCTGAAACCCTTCCTGCTCTCAC
CACTGCTGTTGTACCTCGCGTCGTGTGCCCGATCATGTTGTGGGCGGAAA
AAAAAAACTTGAAAAAACAACGTGGAAAAAACCGTGGAAAAAACCGTCCC
GTCACCTTCGTCCTTGGTGGTGGTGTGTTAGGCGCTTCGACCCACCCTCA
TGGCGGCTGTTCCGAGGGTCCTCAATCGCTTGCACGACAAGATCGTGCAA
GGCATGCTGGCCGCGGGGGGCCTGAAGACCAAGCTTTTTGTCAAAGCTTG
CGAGGCCAAGGTGGGACGGAGAAAGGGAAGGGGTAGTGGCGTTAAGTGAC
TTGACCAAGGCCGCAGCTTTGTTTTGCGCGTGTCCAACAAAGGGTATAAT
CCGGACTGCGAACATCTCCAGCAATCATGCAGTCTTGTTGTTTTTGATCC
AACTGTTTGTTCTTTTCCGCGTGTAGTCTCTCCCGGCTGCGGCAGTATTT
TTCGCTGCCGAATAATCCTCTAGAGCCTCGCCCCTAGAAGAGTGTGCCGG
CCTAACAGGCTAGGCGCCCCTCACTTGAGGACAAGATGGGCACGTCCCCC
TCGCTTTCGATTTGTGGTTGCAGTGCTGTTGTATCTGTCACGACTCTTGT
CGATGTAGATGCCCTTGTTCGTGTTGGCACCATGGTTCCCTCGTTGGGTA
TACCTGTCCAATCACACTCAATCGCGCGAGTTTTGACCACGGTTTTGGGC
TTGCTTTATCCCTTTCGTTTCGCGTGTTATTTTTTGTCTTGGGAAGGTGC
AAGGACTCCACGAGGGCCGCCTGACGCATGCCCTGTGGGATAAGCTCGTC
TTCGGCAAGGTCAAGGTGAGAGCACGAGGCGTGATTCTTCTTGGTCTGGT
TTTGATGGTCTCACGCCCGGTAGGCAAGAAGCTCCCCTGCTGCCGTGTGG
GTACCATTGGCTAAACTGGACAACGGTCTTGTGTTGCGACTCTTGTTGAC
CTACCTTTGTGCTGTAACGACAGCAGCCGCTAGCTATGTGACCTGTTGAT
TTGTCTCGATTTCACCGAGGAAGGAGCGGCCGAGTTTCGTTGGGCGATTA
CAATCACCGCAGAGCCTTCTCAGCAGCGCATTACCGCTTTTGCGGCCACC
CGACAGCGAGAATTGACATCACAGGTCAACTGCTGTGCCTCTCCTTGTTC
CCTCCGGCCGTTACTGACTGCGTCCTGCCCTCCCCCGCTCTTGCCCATCC
ATAGGCGGCTCTTGGTCTCGATCGGATCAAGATGATGGTAACCGGGTCAG
CTCCAGTGGCGGCCCACGTCCTCACCTTCATGAGAATCCTTGTAGGAGTG
CCGTTGTTGGAGGGGTGAGAGACTCAGCCCCTTCGGGTGGGACGGGGTAG
AGGGGGTTGATTGTGGGCGCCTGGTTTGCGTACGTTGGGTTTGGAGAGGC
CTTACGCAGCACGAGTTCTTTTGCTGAACTGGTTGCGGCGCAAGCACTTT
TGTCCGGGAGATCGGGCAACGACACCCACGCCGTGTGCACGACTCGTGGC
GGGTTCTATCCCAGCGGCTTAAACGCGACCCATTCCTGTCAAGTGTTAGA
CGAGTACGGACAGAAGAAGGTACTGAGTAGAGAGATCGGAACGGTTTTCC
ATGTGAAGACAACAACAACAACAACAACAACAACGACAACAACAACAACA
GCATTCCCGCAAATCTTCGAGTCAATCTCATACACGACGCCCCGTTCCGT
GCGCATGTATCTGCTGCAGATATGGGCAGACCGAAACCACGGCGGGTGCC
ACCATGACCCAGAGCGGCGACTTCTCGGTGGGCCACGTCGGCGGCCCGTT
CAGCTGCACCGAGATCTGCCTCAAGGACGTCCCCGAGATGGGCTACCGAC
ACACGGACTCGTGGCACGGGGGTGACCCGAGGGACGCCGGCGGCGGCGGC
GAGGCGTGCGAGGGCAGAGGAGAGGTATGCGCTGCTGGGGTCGGGGGCGA
TTTGGTTGGTTGTGTGTTGTCCGACGTCGGTTTTGGTTGCACCCCATGTT
GGTGTTTCTCGGAGGCGCAGCACCGGCGGTGGTACCCGGACCAGGCGTGT
GTATGTGGTGTCGGTGAGGCTGGTTACGAGGGGTGGGTGAAGCCCTCGTC
GCTGTGTTTTGCACACGTACCCATCTCTGGTGATTTTACCCTTTGCTTAC
TCTTTTTCTCCGAACGCATGGCGCGAAACAGATCCCCGCCCTCCGCCCCC
ACACGCGTGTCCGTTACTCCCCACCCACGTACAGATTTGCTTCCGTGGGT
GCAGTGTGTTTGTGGGGTACTATAAAGACGATGAGAAGACGCGAGATGCT
TTCGACGAAAACGGCTGGCTATTGTCGGGAGACATCGGCATGTGGAATTC
AGATGGGGCGCTGAAGATTATCGGTGCGTGCGCATGCTCTGACAAGTTGT
TGCTATTGCTGATAGGCTTGTTTTGTGGCAGCAGCTGTGGTGGTGGTGGT
GTTGGTTTTGGCGACTACTGCTGGTGTTTTCGTGTGCCGCGGGCCTTGTT
CCTCGTGCGCCGTTGCTGTTCAACATCGGTCCTGCACGCTTTTGGTGAAA
CAACACGCCGTGGAAGGTCTTCCTGCCGAATGTCGCTCCTGAAACTTATG
TCGTTGTCGCTAAGATGTTTGTTTGTGCTGTGGTGTGTTTGTCGGATATT
CTCTCCCACCGGCGTCGACGACGGTATGTACGGTGGTCATTCGATGCTTT
GGGCGGGCGGGGTGCACTGCAACCCGACGTGACATCTGGGGGTTTGCCGG
TCGGGCACGATGGTCCGCGGGAGCAGACCGCAAGAAGAACATCTTCAAGC
TTTCCCAGGTGAGGGCTCGGCCATGA
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9418:2..5527+

>mRNA_E_fasciculatus_S2_contig9418.17465.1 ID=mRNA_E_fasciculatus_S2_contig9418.17465.1|Name=mRNA_E_fasciculatus_S2_contig9418.17465.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1248bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9418:2..5527+ (Ectocarpus fasciculatus EfasUO2)
ACCGTGCCTCTCTACGACACGCTCGGGCCGGAGACCGTTGAGTTCGTGGT
AAACCAGACAAGCCTCACGACGGTCGTGTGTTCTGGCGTAGCGGAACTCC
GGAAACTGGTGGCCATTGCGGATGGGGGCCGATGCCCGTCGCTGCAGACC
GTGGTGGTGATGGACGGCATCAGCGAGAGGGAGAGGAGAGAGGCCGTGCG
CGCAGGTCTACGGGTGTACGCCTTCGCGGAGGTGGAGGGGATAGGGGCCG
CACACGCTCACCCGCACCGCCCACCGGGGCCCAACGACCTGGCCACGTTC
TGCTACACGTCGGGAACGACCGGAAACCCCAAGGGGGCGTTGCTGACCCA
CCGCAACTTCATCGCGGACGCGGCGGCGGCGGAGTTGATGGAGACGTTCA
ACGCCGACTCGACGGACGTGTACCTGTCGTACCTGCCGCTCCCCCACATC
TTCGAGCGGATGGTGCAGGTGGCCATTTTCAACGTGGGTGCGGCTGTGGG
CAGTTTCCGGGGCGATCCTACCCTGCTGGTAGAAGACATGCAGGCGCTTC
GACCCACCCTCATGGCGGCTGTTCCGAGGGTCCTCAATCGCTTGCACGAC
AAGATCGTGCAAGGCATGCTGGCCGCGGGGGGCCTGAAGACCAAGCTTTT
TGTCAAAGCTTGCGAGGCCAAGGTGCAAGGACTCCACGAGGGCCGCCTGA
CGCATGCCCTGTGGGATAAGCTCGTCTTCGGCAAGGTCAAGGCGGCTCTT
GGTCTCGATCGGATCAAGATGATGGTAACCGGGTCAGCTCCAGTGGCGGC
CCACGTCCTCACCTTCATGAGAATCCTTGTAGGAGTGCCGTTGTTGGAGG
GATATGGGCAGACCGAAACCACGGCGGGTGCCACCATGACCCAGAGCGGC
GACTTCTCGGTGGGCCACGTCGGCGGCCCGTTCAGCTGCACCGAGATCTG
CCTCAAGGACGTCCCCGAGATGGGCTACCGACACACGGACTCGTGGCACG
GGGGTGACCCGAGGGACGCCGGCGGCGGCGGCGAGGCGTGCGAGGGCAGA
GGAGAGATTTGCTTCCGTGGGTGCAGTGTGTTTGTGGGGTACTATAAAGA
CGATGAGAAGACGCGAGATGCTTTCGACGAAAACGGCTGGCTATTGTCGG
GAGACATCGGCATGTGGAATTCAGATGGGGCGCTGAAGATTATCGCAGAC
CGCAAGAAGAACATCTTCAAGCTTTCCCAGGTGAGGGCTCGGCCATGA
back to top