mRNA_E_fasciculatus_S2_contig938.17428.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig938.17428.1 vs.
Match: Cupin_2 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI4_ECTSI) HSP 1 Score: 350 bits (899), Expect = 4.870e-120 Identity = 193/204 (94.61%), Postives = 194/204 (95.10%), Query Frame = 1
Query: 241 MASQHYPRRRITITGCVLVGLGFALLRLPLDQKSYAKESAKFLRKDPKGKRETPRGGMVRLGELKSMPVNHDGSGATKQTMILNGQVPHLTGFTRAVFSPGDEVELHWHTSMDEVFYAAEGKGTIEVDGTVVQLTPGTCVHVAAGQKHSLINNGDVDMVLFYFGIAVAPATEEGGXXXXXXXXXXXXXX-------NALHAIGA 831
MASQHYPRRRITITGCVLVGLGFALLRLPLDQKSYAKESAKFLRKDPKGKRETPRGGMVRL ELKS+PVNHDGSGA KQTMILNGQVPHLTGFTRAVFSPGDEVELHWHTSMDEVFYAAEGKGTIEVDGTVVQLTPGTCVHVAAGQKHSLIN GDVDMVLFYFGIAVAPATEEGGXXXXXXXXXXXXXX NALHAIGA
Sbjct: 1 MASQHYPRRRITITGCVLVGLGFALLRLPLDQKSYAKESAKFLRKDPKGKRETPRGGMVRLSELKSIPVNHDGSGAKKQTMILNGQVPHLTGFTRAVFSPGDEVELHWHTSMDEVFYAAEGKGTIEVDGTVVQLTPGTCVHVAAGQKHSLINKGDVDMVLFYFGIAVAPATEEGGXXXXXXXXXXXXXXXXXXXXXNALHAIGA 204
BLAST of mRNA_E_fasciculatus_S2_contig938.17428.1 vs.
Match: Cupin (n=2 Tax=unclassified Alkalinema TaxID=2635015 RepID=A0A251WIY5_9CYAN) HSP 1 Score: 99.4 bits (246), Expect = 1.110e-22 Identity = 47/107 (43.93%), Postives = 65/107 (60.75%), Query Frame = 1
Query: 421 LGELKSMPVNHDGSGATKQTMILNGQVPHLTGFTRAVFSPGDEVELHWHTSMDEVFYAAEGKGTIEVDGTVVQLTPGTCVHVAAGQKHSLINNGDVDMVLFYFGIAV 741
L ++ PV+H+ TKQ M+ + +PHLT F++A F PG H H M EVF+ G G I ++G L PGTCV V AG+ H ++N G+ D+VL YFGI+V
Sbjct: 6 LSQIPGEPVSHNPE-ITKQVMLRSTDLPHLTNFSQARFGPGQSAVAHTHADMCEVFFVEAGLGEIRINGECYALLPGTCVVVEAGELHEVLNTGEADLVLTYFGISV 111
BLAST of mRNA_E_fasciculatus_S2_contig938.17428.1 vs.
Match: Cupin (2 domain-containing protein n=2 Tax=Calothrix TaxID=1186 RepID=A0A1Z4JV48_9CYAN) HSP 1 Score: 99.4 bits (246), Expect = 1.470e-22 Identity = 48/111 (43.24%), Postives = 64/111 (57.66%), Query Frame = 1
Query: 421 LGELKSMPVNHDGSGATKQTMILNGQVPHLTGFTRAVFSPGDEVELHWHTSMDEVFYAAEGKGTIEVDGTVVQLTPGTCVHVAAGQKHSLINNGDVDMVLFYFGIAVAPAT 753
L EL PV+H+ K+ M+ G +PHLT F++A F+PG H H M EVF+ G G I VDG L PG+CV V G+ H ++NNG ++VL YFG+ V T
Sbjct: 6 LNELPEQPVSHNPQ-IKKKVMLKLGDLPHLTNFSQARFTPGQSAPAHAHQDMSEVFFVEAGAGAIYVDGKEYALVPGSCVAVEPGEVHEVVNNGTTELVLTYFGLRVEQQT 115
BLAST of mRNA_E_fasciculatus_S2_contig938.17428.1 vs.
Match: Cupin (domain-containing protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3LG09_9CHLR) HSP 1 Score: 99.0 bits (245), Expect = 1.550e-22 Identity = 48/110 (43.64%), Postives = 63/110 (57.27%), Query Frame = 1
Query: 412 MVRLGELKSMPVNHDGSGATKQTMILNGQVPHLTGFTRAVFSPGDEVELHWHTSMDEVFYAAEGKGTIEVDGTVVQLTPGTCVHVAAGQKHSLINNGDVDMVLFYFGIAV 741
+V L EL PV+H+ K+ M+ G +PH+T F++AVF+PG H H M EVF G G I +DGT L PGTCV V ++H L N G + L YFG+AV
Sbjct: 3 IVTLSELPDEPVSHNPE-IKKKVMLRQGDLPHITNFSQAVFAPGQTAVPHSHPDMAEVFLVLSGSGVITIDGTTCPLEPGTCVAVQPNERHELSNTGAAPLALTYFGVAV 111
BLAST of mRNA_E_fasciculatus_S2_contig938.17428.1 vs.
Match: Cupin (domain-containing protein n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A845ZUA0_9CYAN) HSP 1 Score: 96.7 bits (239), Expect = 1.190e-21 Identity = 48/109 (44.04%), Postives = 64/109 (58.72%), Query Frame = 1
Query: 415 VRLGELKSMPVNHDGSGATKQTMILNGQVPHLTGFTRAVFSPGDEVELHWHTSMDEVFYAAEGKGTIEVDGTVVQLTPGTCVHVAAGQKHSLINNGDVDMVLFYFGIAV 741
V L L V+H+ + KQ ++ +G +PHLT F +A FSPG H H M EVF+ G G I +DG+ L PGTC+ V G+ H +IN G ++VL YFGIAV
Sbjct: 4 VSLAALPIETVSHNPA-IKKQVLLRSGDLPHLTNFAQARFSPGQVAAAHAHADMGEVFFVEAGSGIIRIDGSEYGLRPGTCIVVEPGEVHEVINTGTCELVLTYFGIAV 111
BLAST of mRNA_E_fasciculatus_S2_contig938.17428.1 vs.
Match: cupin (domain-containing protein n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI00168651A4) HSP 1 Score: 95.9 bits (237), Expect = 2.610e-21 Identity = 47/115 (40.87%), Postives = 72/115 (62.61%), Query Frame = 1
Query: 415 VRLGELKSMP---VNHDGSGATKQTMILNGQVPHLTGFTRAVFSPGDEVELHWHTSMDEVFYAAEGKGTIEVDGTVVQLTPGTCVHVAAGQKHSLINNGDVDMVLFYFGIAVAPA 750
++L L ++P V+H+ + K+ M+ G +PHLT F++A F+PG H HT M EVF+ G+GTI ++G LTPGTCV V + H ++N+G+V++VL YFG+ A
Sbjct: 1 MKLTSLDTVPEEAVSHNPA-IKKRVMLRLGDLPHLTNFSQARFAPGQIANGHAHTDMAEVFFVEAGQGTITIEGKAYPLTPGTCVAVEPNETHEVVNDGEVELVLTYFGLRAQAA 114
BLAST of mRNA_E_fasciculatus_S2_contig938.17428.1 vs.
Match: Cupin_2 (domain-containing protein n=3 Tax=Mariprofundus ferrooxydans TaxID=314344 RepID=Q0F235_9PROT) HSP 1 Score: 93.6 bits (231), Expect = 1.830e-20 Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 1
Query: 412 MVRLGELKSMPVNHDGSGATKQTMILNGQVPHLTGFTRAVFSPGDEVELHWHTSMDEVFYAAEGKGTIEVDGTVVQLTPGTCVHVAAGQKHSLINNGDVDMVLFYFGI 735
+V+L E+ + PVNH SG ++ ++ G +P + A+F PG+ VE+H H + EVFY G+G + V+ V + G+C V G+ H+LIN+GDVDM L YFG+
Sbjct: 3 LVQLAEIDAGPVNHT-SGIMRKILLGEGDLPASVRLSHALFKPGESVEMHKHDRLFEVFYVLSGQGQLIVEERPVDIGAGSCFMVEPGEMHALINDGDVDMALIYFGL 109
BLAST of mRNA_E_fasciculatus_S2_contig938.17428.1 vs.
Match: Cupin (2 conserved barrel domain protein n=14 Tax=Hapalosiphonaceae TaxID=1892263 RepID=G6FPT5_9CYAN) HSP 1 Score: 93.2 bits (230), Expect = 2.490e-20 Identity = 45/108 (41.67%), Postives = 63/108 (58.33%), Query Frame = 1
Query: 412 MVRLGELKSMPVNHDGSGATKQTMILNGQVPHLTGFTRAVFSPGDEVELHWHTSMDEVFYAAEGKGTIEVDGTVVQLTPGTCVHVAAGQKHSLINNGDVDMVLFYFGI 735
+V L E+ PV+H+ KQ M+ G++P LT F++A FSPG H H M EVF+ G G I ++ L PGTCV V A + H ++NNG ++VL YFG+
Sbjct: 3 IVSLNEIPQEPVSHNPE-IKKQVMLRLGELPGLTNFSQARFSPGQTASAHAHNDMCEVFFVEAGSGIIRINNQEYPLLPGTCVAVEATETHEIVNNGTTELVLTYFGL 109
BLAST of mRNA_E_fasciculatus_S2_contig938.17428.1 vs.
Match: Cupin (2 domain-containing protein n=2 Tax=Nostocaceae TaxID=1162 RepID=A0A1Z4S8G0_9NOSO) HSP 1 Score: 92.0 bits (227), Expect = 7.240e-20 Identity = 44/107 (41.12%), Postives = 61/107 (57.01%), Query Frame = 1
Query: 421 LGELKSMPVNHDGSGATKQTMILNGQVPHLTGFTRAVFSPGDEVELHWHTSMDEVFYAAEGKGTIEVDGTVVQLTPGTCVHVAAGQKHSLINNGDVDMVLFYFGIAV 741
L +L V+H+ TK+ M+ G +PHLT F++A FSPG H H M EVF+ G G I VD L PG C+ + G+ H +IN+G ++VL YFG+ V
Sbjct: 6 LNDLPEESVSHNPE-ITKKVMLRFGDLPHLTNFSQARFSPGQTASAHAHQDMCEVFFVQAGAGVIRVDSKEYPLLPGNCIAIEPGEVHEIINSGSAELVLTYFGLQV 111
BLAST of mRNA_E_fasciculatus_S2_contig938.17428.1 vs.
Match: Cupin (2 conserved barrel domain protein n=6 Tax=Nostocales TaxID=1161 RepID=K9QGF5_9NOSO) HSP 1 Score: 90.5 bits (223), Expect = 2.940e-19 Identity = 43/107 (40.19%), Postives = 61/107 (57.01%), Query Frame = 1
Query: 421 LGELKSMPVNHDGSGATKQTMILNGQVPHLTGFTRAVFSPGDEVELHWHTSMDEVFYAAEGKGTIEVDGTVVQLTPGTCVHVAAGQKHSLINNGDVDMVLFYFGIAV 741
L L V+H+ K+ M+ G++PHLT F++A F+PG H H M EVF+ G G I VD L PG C+ + G+ H +INNG+ ++VL YFG+ V
Sbjct: 6 LNNLPEECVSHNPD-IKKKVMLRLGEIPHLTNFSQARFAPGHTAPAHTHLDMCEVFFVEAGSGVIRVDNQEYPLLPGKCIAIEPGEVHEVINNGETELVLTYFGLLV 111 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig938.17428.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig938.17428.1 >prot_E_fasciculatus_S2_contig938.17428.1 ID=prot_E_fasciculatus_S2_contig938.17428.1|Name=mRNA_E_fasciculatus_S2_contig938.17428.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=278bp VVETTSARGACALNNGRRIVSCCSFSCDLVQANLILEHSRQAKLTATGWRback to top mRNA from alignment at E_fasciculatus_S2_contig938:1331..4056+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig938.17428.1 ID=mRNA_E_fasciculatus_S2_contig938.17428.1|Name=mRNA_E_fasciculatus_S2_contig938.17428.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2726bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig938:1331..4056+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig938:1331..4056+ >mRNA_E_fasciculatus_S2_contig938.17428.1 ID=mRNA_E_fasciculatus_S2_contig938.17428.1|Name=mRNA_E_fasciculatus_S2_contig938.17428.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=834bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig938:1331..4056+ (Ectocarpus fasciculatus EfasUO2)back to top |