prot_E_fasciculatus_S2_contig9344.17400.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9344.17400.1
Unique Nameprot_E_fasciculatus_S2_contig9344.17400.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length102
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9344.17400.1 vs. uniprot
Match: D7G0T3_ECTSI (Retinoblastoma binding protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T3_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 8.470e-48
Identity = 93/102 (91.18%), Postives = 97/102 (95.10%), Query Frame = 0 
Query:    1 MLPGKYPRALALTADGVAHVVDIKENTADAVSPAGETVISPPSAASSAGNPSPAKKPRPAGGQAAASATAKRGPDLPAVLCLALDRRASRVCLGTCQGQILS 102
            MLPGKYPRA+ALTADGVAHVVDIKENTADAVSPA  T+ISPPSAASSAGNPSPAKKPRPAG QAAA+ATA RGP LPAVLCLALDRRASRVCLGTCQGQ+LS
Sbjct:  118 MLPGKYPRAMALTADGVAHVVDIKENTADAVSPAAATIISPPSAASSAGNPSPAKKPRPAG-QAAAAATANRGPALPAVLCLALDRRASRVCLGTCQGQVLS 218
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9344.17400.1 vs. uniprot
Match: A0A6H5KX51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX51_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 4.240e-41
Identity = 85/105 (80.95%), Postives = 89/105 (84.76%), Query Frame = 0 
Query:    1 MLPGKYPRALALTADGVAHVVDIKENTADAVSPAGETVISPPSAASSAGNPSPAKKPRPAG---GQAAASATAKRGPDLPAVLCLALDRRASRVCLGTCQGQILS 102
            MLPGKYPRA+ALTADGVAHVVDIKENT DAVSPA E +ISPPSAASSAG+PSPAKKPRPAG           A RGP LPAVLCLALDRRASRVCLGTCQGQ+LS
Sbjct:    5 MLPGKYPRAMALTADGVAHVVDIKENTVDAVSPAEERIISPPSAASSAGSPSPAKKPRPAGQVXXXXXXXVAANRGPALPAVLCLALDRRASRVCLGTCQGQVLS 109
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9344.17400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0T3_ECTSI8.470e-4891.18Retinoblastoma binding protein 5 n=1 Tax=Ectocarpu... [more]
A0A6H5KX51_9PHAE4.240e-4180.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9344contigE_fasciculatus_S2_contig9344:3649..4954 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9344.17400.1mRNA_E_fasciculatus_S2_contig9344.17400.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9344 3649..4954 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9344.17400.1 ID=prot_E_fasciculatus_S2_contig9344.17400.1|Name=mRNA_E_fasciculatus_S2_contig9344.17400.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=102bp
MLPGKYPRALALTADGVAHVVDIKENTADAVSPAGETVISPPSAASSAGN
PSPAKKPRPAGGQAAASATAKRGPDLPAVLCLALDRRASRVCLGTCQGQI
LS
back to top