mRNA_E_fasciculatus_S2_contig9339.17394.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9339.17394.1
Unique NamemRNA_E_fasciculatus_S2_contig9339.17394.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN9_ECTSI)

HSP 1 Score: 522 bits (1345), Expect = 1.570e-180
Identity = 319/329 (96.96%), Postives = 321/329 (97.57%), Query Frame = 1
Query:    1 MEVETPLAEMPPPSAATAAAVSNGDSAXXXXXXXXXXXXXXXXXXNGGVEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPASVSRKAVMAPIAKAVKSLNKATQPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
            MEVETPLAEMPPPSAATAA VSNGDS XXXXXXXXXXXXXXXXX NGGVEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAP+AAPA   XXXXXXXXXXXXXXXXXXXXXXX  KSDKKAAPASVSRKAVMAPIAKAVKSLNKAT+PRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE
Sbjct:    1 MEVETPLAEMPPPSAATAA-VSNGDSGXXXXXXXXXXXXXXXXXSNGGVEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPRAAPATAAXXXXXXXXXXXXXXXXXXXXXXXAGKSDKKAAPASVSRKAVMAPIAKAVKSLNKATEPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 328          
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Surp (module-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C863_9STRA)

HSP 1 Score: 316 bits (809), Expect = 7.190e-103
Identity = 190/306 (62.09%), Postives = 217/306 (70.92%), Query Frame = 1
Query:  136 NGG---VEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPASVSRKAVMAPIAKAVKSLNKATQPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYF-------------------TSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
            NGG   VE   QGKVKGII PPP+IRAI DKTARFVAKNGKSFE+RI  SEEG+SAKFNFMRPHDPYYAYYE+KIR+ EE  D P  APA  XXXXXXXXXXX               +  K  A A+V +KAVMAPIAKA +++ K  +P  F FS GHPTGLTA D+DLIKLTAQ+TA GGR FLA LA++EA+NE FQFLK  HALFSYF                   TSLVDAYTKVLQPT  Q+A  ++G  RQ  LER VHRWE+DR ++ K++A  A  DAD++AFRSIDW DFVVVE
Sbjct:   27 NGGAADVEAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAK---------EPGKATAAAAVQKKAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVE 323          
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLT9_9STRA)

HSP 1 Score: 263 bits (673), Expect = 1.730e-78
Identity = 148/277 (53.43%), Postives = 186/277 (67.15%), Query Frame = 1
Query:  163 GKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEEN-GDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPAS-VSRKAVMAPIAKAVKSLNKATQPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
            GKV GIIYPPPDIRA+VDKTA++VA+NGKSFE+RI +SEEGKS+KFNFM+P DPY AYYE +IR FEE  G+ P    A                             S   AAP + VS+ +V+ PIAKA     +A  P   EF + HP GL  LDV++IKLTAQ+TA  GR FLA LA+RE RN  F+FLK +H LFSYFT+LVDAY KVLQPT  QRA V+ G + Q+ LER VHRW  +++ + +K+   A  +A+R+A++S+DWHDFVVVE
Sbjct:   31 GKVTGIIYPPPDIRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRRFEEGKGEGPAEKKAKIAEASPPAAGETRDGKAVADTGKTPTAVS---AAPTTTVSKASVLGPIAKAALHKPEAPPPPQ-EFYISHPDGLNPLDVEIIKLTAQYTAASGRQFLAALAQREQRNPLFEFLKPSHILFSYFTTLVDAYIKVLQPTDAQRAMVKQGLETQKVLERAVHRWVHEKDDEQRKKHQQAEQEAERVAYQSVDWHDFVVVE 303          
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: SWAP/Surp (n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP71_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.750e-71
Identity = 144/277 (51.99%), Postives = 174/277 (62.82%), Query Frame = 1
Query:  163 GKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEEN-GDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPAS-VSRKAVMAPIAKAVKSLNKATQPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
            GKV GIIYPPPDIRA+VDKTA++VA+NGKSFE+RI +SEEGKS+KFNFM+P DPY AYYE +IR FEE  G+ P    A                             S   AAP + VS+ +V+ PIAKA     +A  P   EF + HP GL  LDV++IKLTAQ+TA  GR FLA LA+RE RN  F+FLK +H LFSYFT+LVDAY KVLQPT +QRA V  G + Q+ LER VHR                     R+A++S+DWHDFVVVE
Sbjct:   31 GKVTGIIYPPPDIRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGKGEGPAEKKAKIAEVSPPAAGETRDGKAVADTGETPTAVS---AAPTTTVSKASVLGPIAKAALHKPEAPPPPQ-EFYISHPDGLNPLDVEIIKLTAQYTAASGRQFLAALAQREQRNPLFEFLKPSHILFSYFTTLVDAYIKVLQPTDSQRAMVRQGLETQKVLERAVHRXXXXXXXXXXXXXXXXXXXXXRVAYQSVDWHDFVVVE 303          
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SH94_9STRA)

HSP 1 Score: 243 bits (619), Expect = 5.070e-71
Identity = 139/281 (49.47%), Postives = 175/281 (62.28%), Query Frame = 1
Query:  154 PYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPASVSRKA-VMAPIAKAVKSLNKATQPRA-FEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVEV 990
            P  G+V G+I PPPDIRAIVDKTA FVA+NGK FE RIQAS EG+S KF FMRP+DPY AYYEFKIR+ EEN    K                                 ++ KAA ++VS++A V AP+ +A++ L + T P       +  P+ +T LD ++IKLTAQ+TA  GR FLA LA+RE RN QF FLK TH LFSYFT LVDAYT+ L P    RA V+   D +  L+RC  RW++ R    K++   A  DADR +F+++DWHDFVVVEV
Sbjct:   22 PSSGEVTGVIRPPPDIRAIVDKTALFVARNGKQFEARIQASAEGQSQKFAFMRPNDPYNAYYEFKIREVEENDGELKVVEKPKVEAPVT---------------------TEVKAAASTVSKRATVAAPVQRALQGLGEETTPPVPLTAQLTTPSSVTPLDAEIIKLTAQYTAASGRQFLAGLAQREQRNPQFDFLKPTHVLFSYFTQLVDAYTRALAPPPELRAEVKRVEDPEHALKRCARRWDWSRRVDEKERREKALRDADRASFQAVDWHDFVVVEV 281          
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZB0_9STRA)

HSP 1 Score: 219 bits (557), Expect = 4.150e-65
Identity = 155/278 (55.76%), Postives = 189/278 (67.99%), Query Frame = 1
Query:  160 QGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPASVSRKAVMAPIAKAVKSLNKATQPRAFEFSVG--HPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
            QGK+ G+I PPP+IRA+VDKTA FVAK GKSFE+R+ ASEEGK+AKFNFMRP DPY+AYYE KIR+ E           XXXXXXXXXXXXXXXXXXXXXXXXXXXX        AS+     + PIA+  ++      P   EFSV   HP GLT  DVD IKL AQ+TAV GR FLA LA RE RN QF FLK TH LFSYFT LVD Y K+L P+A  +  +++  + Q  +E  V RW++ R +  +++   +   A+R+AF++IDW DF VVE
Sbjct:    8 QGKITGVIIPPPEIRAVVDKTAAFVAKIGKSFEQRVLASEEGKTAKFNFMRPFDPYHAYYEMKIREGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVKASI-----LNPIAQLAQTKPTEASPE-LEFSVANSHPAGLTPFDVDAIKLAAQYTAVNGREFLANLALREQRNPQFDFLKPTHMLFSYFTYLVDCYAKILHPSAALKDTIDAKGNYQTAMESAVRRWQWTRAEAERRRMENSEDSAERLAFQAIDWFDFTVVE 279          
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYH2_GLOUD)

HSP 1 Score: 216 bits (550), Expect = 9.710e-61
Identity = 154/290 (53.10%), Postives = 200/290 (68.97%), Query Frame = 1
Query:  160 QGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDF-EENG-DAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPAS----VSRKAVMAPIAKAVKSLNKA--TQPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTAT------QRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
            QG+V G+I PPPDIRA+VDKTA+FVA+NG+SFE +I    E  SAKF+F++P DPY+AYYE K+ ++ E+N  +A     A     XXXXXXXXXXXXXXXXXXXXXXX +D+ A P +    V +KAV    AK  K L +   T P   +F + HP  L+ALD +++ LTAQ+TA+ G+ FLA LA RE RN QF FLK THALF+YFT+LV++YT+VL PT        Q   +E G DR + L+RCVH+ E+ R ++ +K A  A +DA+R+A   IDWHDFVVVE
Sbjct:   14 QGRVTGLIVPPPDIRAVVDKTAQFVARNGRSFERKIAG--ETVSAKFSFLKPSDPYHAYYEHKVSEWIEQNAQEAENPTVAQEEAQXXXXXXXXXXXXXXXXXXXXXXXATDEPADPVNALVVVEKKAVETVTAKVAKKLKEKALTPPEPEKFKIKHPQ-LSALDQEIMYLTAQYTALSGKTFLAGLATREQRNPQFDFLKPTHALFAYFTALVESYTQVLAPTRENDEQQQQMKRIEEGMDRMKVLDRCVHKLEWVRTEQERKDAEAAESDAERLALAQIDWHDFVVVE 300          
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4YYN6_9STRA)

HSP 1 Score: 209 bits (532), Expect = 4.850e-60
Identity = 138/294 (46.94%), Postives = 186/294 (63.27%), Query Frame = 1
Query:  136 NGGVEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPASVSRKAVMAPIAKAVKSLNKATQPRAFE-FSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYV---------ESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
            NG V     G+V GIIYPPP+IRA+VDKTA+FVA+NG+SFE +I    E  SAKF+F++P+DPY+AYYE K+ +FE   + P+ A +   XXXXXXXXXXXX                 K     V +K + A ++K+++ +    QP A E F   HPT LT LD +++ LTAQ+TAV G+ FL+ LA RE RN QF FLK TH LF+YFT LV++Y K+L   A +   +         E+G DR Q L+RCVH+ E+ R ++  KQ      DA+++A++ IDWHDFVVVE
Sbjct:    8 NGAVH----GRVTGIIYPPPEIRAVVDKTAQFVARNGRSFERKIAG--EVISAKFSFLKPNDPYHAYYEHKVEEFETQLNEPEPAKSPAAXXXXXXXXXXXXAPAALP-------SEPAKIEVGVVEKKPIEAVVSKSLQKIKDKNQPPAEEQFKQKHPT-LTPLDQEIMYLTAQYTAVSGKPFLSGLATREQRNPQFDFLKPTHPLFAYFTFLVESYAKILTAKAQENKKMSGNVLIEALEAGMDRMQVLDRCVHKHEWMRREEEDKQKEAMETDAEKLAYQQIDWHDFVVVE 287          
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Uncharacterized (protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G7N8_9STRA)

HSP 1 Score: 211 bits (537), Expect = 2.830e-59
Identity = 125/285 (43.86%), Postives = 169/285 (59.30%), Query Frame = 1
Query:  160 QGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDF-------EENGDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPASVSRKAVMAPIAKAVKSLNKAT--QPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
            QGKV GIIYPPPDIRA+VDKTA+FVA+NG++FE R+    E  S KF+F++P DPY+ YYEFK+ +F       EEN  + +                                K++         +KAV    AK  + LN+ T   P    + + HPT L+ALD +++ LTAQ+TA  G++FLA LA RE RN QF FLK THALF+YFT+LV++Y +VL  +  Q   +E G  R + L+RCVHR E+ R +  K+   +A +DA+R+A   IDWHDFVVVE
Sbjct:   21 QGKVTGIIYPPPDIRAVVDKTAQFVARNGRNFERRLAG--ETSSTKFSFLKPSDPYHTYYEFKVNEFTEKDFVIEENKKSQENETTDEHSTEHSASAKPLEKSTNAESGSNAGSKNE-----VIFEKKAVETLTAKVSRKLNEKTVEPPPPELYKIQHPT-LSALDQEIMYLTAQYTAHSGKSFLAGLATREQRNPQFDFLKPTHALFAYFTALVESYAQVLSKSKEQMHRIEEGMSRMKVLDRCVHRMEWMRMEHEKQAKEVAESDAERLALAQIDWHDFVVVE 297          
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Uncharacterized (protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJM3_9STRA)

HSP 1 Score: 208 bits (529), Expect = 7.620e-59
Identity = 125/278 (44.96%), Postives = 169/278 (60.79%), Query Frame = 1
Query:  160 QGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPASVSRKAVMAPIAKAVKSLN-KATQPRAFE-FSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
            QG+V GIIYPPPDIRA+VDKTA+FVA NG++FE RI    E  SAKF+F+R  DPY+AYYE K+ +F       K + +           X                K+ + +    V +KAV    AK  K +  KA +P   E F + HP+ L+ALD +++ LTAQ+TA+ G +FL+ LA RE RN QF FLK TH LF+YFT+LV++YT+VL     Q   +E G +R + L+RCVHR E+ R ++ +K    A +DA+R A   +DWHDFVVVE
Sbjct:   14 QGRVTGIIYPPPDIRAVVDKTAQFVANNGRAFESRIVG--ERMSAKFSFLRDSDPYHAYYEHKVSEF-----IAKKSQSAEEDHQETEQEXEEAQPTVEKLKAEEVVKAAETSGDVVVEKKAVQDVTAKVAKKIKEKALEPPPEEKFIIKHPS-LSALDQEIMYLTAQYTALSGSSFLSGLATREQRNPQFDFLKPTHPLFAYFTALVESYTQVLGKADAQMKRIEEGVERMKVLDRCVHRMEWQRTEQERKDKEAAESDAERRALAQVDWHDFVVVE 283          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.570e-18096.96protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN9... [more]
Surp7.190e-10362.09module-domain-containing protein n=1 Tax=Tribonema... [more]
Uncharacterized1.730e-7853.43protein n=1 Tax=Nannochloropsis salina CCMP1776 Ta... [more]
SWAP/Surp1.750e-7151.99n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID... [more]
Hypothetical5.070e-7149.47protein n=2 Tax=Pelagomonas calceolata TaxID=35677... [more]
Hypothetical4.150e-6555.76protein (Fragment) n=2 Tax=Spumella elongata TaxID... [more]
Uncharacterized9.710e-6153.10protein n=1 Tax=Globisporangium ultimum (strain AT... [more]
Uncharacterized4.850e-6046.94protein (Fragment) n=1 Tax=Aphanomyces stellatus T... [more]
Uncharacterized2.830e-5943.86protein n=1 Tax=Albugo candida TaxID=65357 RepID=A... [more]
Uncharacterized7.620e-5944.96protein n=4 Tax=Phytophthora kernoviae TaxID=32545... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9339contigE_fasciculatus_S2_contig9339:502..4959 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score528.9
Seed ortholog evalue1.8e-147
Seed eggNOG ortholog2880.D7FWN9
Preferred nameSF3A1
Model size1008
KEGG koko:K12825
KEGG Pathwayko03040,map03040
KEGG ModuleM00352
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000245,GO:0000375,GO:0000377,GO:0000381,GO:0000389,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005686,GO:0006139,GO:0006376,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007276,GO:0007283,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0010468,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0019219,GO:0019222,GO:0019953,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031323,GO:0031974,GO:0031981,GO:0032501,GO:0032504,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043484,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0045292,GO:0046483,GO:0048024,GO:0048232,GO:0048609,GO:0050684,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0051704,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0071004,GO:0071010,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:1901360,GO:1901363,GO:1902494,GO:1903311,GO:1990904
Exons6
EggNOG free text desc.mRNA 3'-splice site recognition
EggNOG OGsKOG0007@1,KOG0007@2759
Cds size1008
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9339.17394.1prot_E_fasciculatus_S2_contig9339.17394.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9339 502..4959 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842583.5534823-CDS-E_fasciculatus_S2_contig9339:501..6691696842583.5534823-CDS-E_fasciculatus_S2_contig9339:501..669Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9339 502..669 +
1696842583.568252-CDS-E_fasciculatus_S2_contig9339:1418..16371696842583.568252-CDS-E_fasciculatus_S2_contig9339:1418..1637Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9339 1419..1637 +
1696842583.5804322-CDS-E_fasciculatus_S2_contig9339:2234..23691696842583.5804322-CDS-E_fasciculatus_S2_contig9339:2234..2369Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9339 2235..2369 +
1696842583.5918255-CDS-E_fasciculatus_S2_contig9339:3128..32511696842583.5918255-CDS-E_fasciculatus_S2_contig9339:3128..3251Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9339 3129..3251 +
1696842583.60371-CDS-E_fasciculatus_S2_contig9339:4049..41741696842583.60371-CDS-E_fasciculatus_S2_contig9339:4049..4174Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9339 4050..4174 +
1696842583.6185117-CDS-E_fasciculatus_S2_contig9339:4721..49591696842583.6185117-CDS-E_fasciculatus_S2_contig9339:4721..4959Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9339 4722..4959 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9339.17394.1

>prot_E_fasciculatus_S2_contig9339.17394.1 ID=prot_E_fasciculatus_S2_contig9339.17394.1|Name=mRNA_E_fasciculatus_S2_contig9339.17394.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=336bp
MEVETPLAEMPPPSAATAAAVSNGDSAAAVEGNGEAAAEGNGESSNGGVE
QPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKF
NFMRPHDPYYAYYEFKIRDFEENGDAPKAAPAKAATAEAGEGEGGDADGG
EDGAGGSAAGKSDKKAAPASVSRKAVMAPIAKAVKSLNKATQPRAFEFSV
GHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHA
LFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKK
AKKQATLAAADADRIAFRSIDWHDFVVVEVRGRGE*
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mRNA from alignment at E_fasciculatus_S2_contig9339:502..4959+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9339.17394.1 ID=mRNA_E_fasciculatus_S2_contig9339.17394.1|Name=mRNA_E_fasciculatus_S2_contig9339.17394.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4458bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9339:502..4959+ (Ectocarpus fasciculatus EfasUO2)
ATGGAGGTGGAGACGCCGCTAGCGGAGATGCCGCCACCAAGCGCCGCGAC TGCTGCTGCTGTCTCCAACGGGGATTCCGCTGCCGCGGTTGAAGGGAACG GGGAGGCGGCGGCGGAAGGGAATGGGGAAAGCAGCAATGGTGGGGTGGAG CAGCCATATCAGGGAAAGGTTGGTGCCGAAAACCGTCGCGTTTATTAGCC AGGACCTCCTGCTTTGTAAAGCAGGAGTTTCAGTAAACGGCGGCGGTGTG AGTTTGGAGCGGGCTGAATCTGGTTTCGAGGGGGCGGCTCCGCGAGAAGC TTCCGAGTGGGTACAGACTCACAACGCTTAGCCGTGCCGCCGACTCTCCC CAAGAGGACTGATTCCCAGTTCCCCAAAGTTGGAGGTGGTGCAGCGCGCG CGTTTGGGATTACGCCGCATTTCTTCGGATTGCCCCGCATATCTTGGCCA TCGGGCCATGTTAGGCTGTCGGCACTTTCCTTTTGTGTGGCCAATCAAGA GGCACAATACCTTTAGTGTTCGTTGCTTGGAAGTACAGCAGTAGTAGTAT CCGGGTACAGCAGTAAATTTGTAGCACCCTTGATTCACGCCCTGGTTTCC CGACGGGGTTCACTCGGCACCGACCTTGTACGGCGTTTTGATATCAAAGG CGGCCCCTTTCGCAGGAAGCTGATACAAGTAGAGCATCGTTGTTACCAGT GGAGTCCGCCAGTTTGACCGCACATGTGTGTCATCTACTCTTCCCTCGTT GACGATGAAGCTACAACGTGTATAGCTCACCGTGATAATAATCGTCGTCC ACTGCAAAACTGTAGACAAAGAAAGCCCTCCCGAGAGAGAGGGCACCGCA CCCACAACCTGTAGGCTTGTGAGAGGCTAACCACTACTTCTACGGCGTTG TGTACATACATATACAGGTGAAGGGGATCATCTACCCGCCACCCGACATC CGGGCCATCGTGGACAAGACGGCTCGCTTCGTGGCGAAGAACGGTAAGAG CTTCGAGGAGCGCATCCAGGCCAGCGAGGAAGGCAAGAGCGCCAAGTTCA ACTTCATGCGCCCCCACGACCCGTACTACGCGTACTACGAGTTCAAGATC CGGGACTTTGAGGAGAACGGGGACGCACCCAAGGCGGTAAGAGAAGGGAG ACGTGTTTCCTTTTGGGCTCGTCTTGTTGTTTGTTATAATGTTGGTGTGT TGTCGTCGTCGTGTGTTCATGTTGTTGTGCGTTCGTCGTCGTTTTTTGTT TGTTGTTGTTGTTTCCCGTCTTTGGTTGATGTTGATGTGTTTGTCGTTAG GAGTTTTAGTTTGTCTATGTCGTGTTCGAAGAGAGTAGGGGCTGCTGGGG AGACTCCTGAGGCGGCGACGTCATGGATCATGACCATCAACGCTTTGAGA TTGAAACGTGGATGGTCCTGTTTGGTACATACAAGAACAGCATTGCGACG TCACGAGGGCCGTAGGCCCATGCAAGGGCTGCGACGTCGTGCCACATCTA AACCGAAGCGTGGCGTAGGTTGGCGCGCCCACTTTCTCGATCGTGCTTCT CCCGCAGGCACATTGTACGAGCACAGCAGGACTTGAGCCCAGATGAATTA TTGTAATGAAACTGCTATGCAACTACGTTGCAGATAGTTTAAATCAATTG ACCCCAAATGAATCAAATGAATCTGCTATGCAACACGTTGAAGATAATTT AATCGTGGTACTCGAAACATTCGTACCCCGCAGGCTCCGGCCAAGGCAGC TACAGCGGAGGCCGGGGAGGGGGAGGGGGGGGACGCGGATGGGGGCGAGG ACGGGGCCGGCGGTAGTGCCGCTGGGAAGTCGGACAAGAAGGCCGCCCCG GCGTCCGTGTCGCGCAAGGTCAGTCGGTTTGTTCGGCAAGAAGGCGCGGT TTCAGGCATGTTTTATATTTCGTGGCGGAAGACGTGTCGGAAAGCAAGAC ACGAAATAGCAGCCTGGCGTGCTCTTCTCTCGTACGACGGTTATTTGCCG GTGATTTTATCGCCGCTTTTACTACTGTTGCTGCTCTGCAGCCTGTGTGA TGACTAAATGTAGCGTCACCGATGTCGGCGTAAGTGCCGTGTCTCTCGGG GAGTTTGAATTTTGTGTTGGGCCAGGGACGCAACCGATTATGGTCGCACT GTCTTCAGGTTGCAACAGGGCCATGAAACCCCCAAAAGTATAAGTGTTAT TTTGTGGTACCACTTGATAGCGGTCATGATGTTGCGAAATGCTCGCATGA CCCGTGGTGGCATTTTTACGACCCGCAGCAGTCCTACTTGAGAACCTCCG GGCTGCAGTAGCCTGCTCACTCGCTCATTTTTGGCGTTTGGTTGCTGTAC CCGCTTGTGTCTTCTCCTTGTGCTGTTTTGATTCAACGTTTGCTTTGGTG CTGTACTGCAACCGGGTGTCAACCCTTGGACCTACACCTGCCTTTTCCGT GCCTCCTTCGTGTGTAATACTAATCCATGTGTGCCTGCTCGCTCATGTTA TCATGCGATAGGCCTACTGTATTACAGCAGAGCATGTTGATTTAAATCGC ACCCCTTGGCCTCACACTGATAATGCTGCTGCTCTCGTTGTGCCGGCTTC TGTACGGTGTTTTTTTTTGTTTTACAGGCGGTGATGGCCCCAATTGCGAA GGCGGTCAAGTCTCTCAACAAGGCCACCCAACCGAGGGCTTTCGAGTTCA GCGTGGGGCACCCCACGGGACTCACCGCTCTCGACGTCGACCTTATCAAG GTACAGCAGCGACGACAGAGAAGCGCTCAAGAATGAGGAAAATATTAATA TTCCACAACGCACGTGTTTGTTGTTGCGAGTATCCCCTCTTGCAGATTGT GCGGCGAGTGCACCGACACTGGCTTGGGGTTGTGTTATACCACATGTTCT GTGTGGACTTCCTTGTGTCAAGGCTGTCATTTTCGCGCGAATCCGTGTGG CGTCGCCGTGTTACCCGTGAGCAGAGAAGACTCCACTCCTCGAGCAGCTA GGGTCTACAGAGTCTAGAGGTTCTTTCTTAGCCCGCGGTCTCGCTCCTCG TGTGGCACTTTTCAATGGCAACTTGAGATCGTGCAATGCGTCACCGTCTG AACCGGTCCCTCGCTCCTTGATAAATTGCTTGGAATTTTCTCTGATAAAT TTCTTGGAATTTTCTCTGATAAATTGTTTGGAATTTTCTCACGGAGCTAA GCTATGGTCTGTTTTCACGGCTCTTCTTGCGGGAAGCCGGGCGCCATGGA TCATCGTCTGCGTGCACCCAAGATCATTAAACGTCCCGTTTACTTTTTAC CCTCCTCCAGCCCACAACACGTGAAGGCTCTGCACACCACACGCACACAG ACGGTTACCTGCCATTCCGCTTGTCCTGCTTTTGTGCAACTCGGTTCATG CTCTGCTGTGATGTGTGATTGGTTGACCCATTTCGCTTTTCCCTCTGTTT TGTGACGTTCGGTTGGTGCTCGTCTGTTGACATTCGTTGATCCGTTTCGA TTTGTGGCTTCGGCTAATGCTTCTCGGTTGTGTGGTTGGTTGATGCAGCT CACGGCGCAGTTTACGGCGGTGGGGGGGAGAAACTTCCTGGCGGAGCTGG CTAAGCGAGAGGCCAGGAACGAACAGTTCCAGTTCCTGAAGCACACGCAC GCGCTCTTCAGCTACTTCACAAGGTACTACAAGCGTGTTTTTCTGTGTTT TCTTAGTGAGCATCGACCGCGCTAGTCGGCTGACCAATGAAAAGACGTCA GTCTTGTAGTAGCGGGGTAATAACAAGACGAACAGTTTCAGTCAAGGGTC AGGGTCCTACCGACAGCACTGCGTGTGTGTGGAGATTGTTGACTTGGCGT CGTCGACTGCGCCGACCGGCTGACCAATGAGAAGGCGCCAAGCTGTGAGT CAGTGTGCCCCTTCCCGTTTTCAGCGCTGTCTCTGGTCGACGCCTGCACG GAGATTTCCAGTCCCCATAGCCCCGCAGCGGGATAAACTAAAACACGATG GCATGACCGACCGCCGCTTCCATCTCGAACATTTTCTCCAAAACCTAATC TTCCAAGTATACACGTACAAGATGAATGTGTGAAAACACACAACGTAGCA TTCAAGTCAACTAAGTGCAGTATACAAGTCAACAACGTACACTGATGATT TTATTTCACGCGCTTCTTTCGCCCGGAACGATCCGCGTCCTCCGCCAAAA CCCGCAATACACACGTGCAGCCTGGTAGACGCGTACACCAAGGTTCTCCA GCCCACCGCGACGCAGCGGGCGTACGTGGAGTCCGGGCGAGATCGACAGC AAACGCTGGAGCGGTGCGTGCACCGGTGGGAGTTCGACAGGGAGAAGAAG GCCAAGAAGCAGGCCACGCTGGCCGCGGCAGACGCCGACAGGATAGCCTT CCGGTCCATCGACTGGCACGACTTCGTGGTCGTCGAGGTGAGGGGGAGGG GGGAATGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9339:502..4959+

>mRNA_E_fasciculatus_S2_contig9339.17394.1 ID=mRNA_E_fasciculatus_S2_contig9339.17394.1|Name=mRNA_E_fasciculatus_S2_contig9339.17394.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1008bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9339:502..4959+ (Ectocarpus fasciculatus EfasUO2)
ATGGAGGTGGAGACGCCGCTAGCGGAGATGCCGCCACCAAGCGCCGCGAC
TGCTGCTGCTGTCTCCAACGGGGATTCCGCTGCCGCGGTTGAAGGGAACG
GGGAGGCGGCGGCGGAAGGGAATGGGGAAAGCAGCAATGGTGGGGTGGAG
CAGCCATATCAGGGAAAGGTGAAGGGGATCATCTACCCGCCACCCGACAT
CCGGGCCATCGTGGACAAGACGGCTCGCTTCGTGGCGAAGAACGGTAAGA
GCTTCGAGGAGCGCATCCAGGCCAGCGAGGAAGGCAAGAGCGCCAAGTTC
AACTTCATGCGCCCCCACGACCCGTACTACGCGTACTACGAGTTCAAGAT
CCGGGACTTTGAGGAGAACGGGGACGCACCCAAGGCGGCTCCGGCCAAGG
CAGCTACAGCGGAGGCCGGGGAGGGGGAGGGGGGGGACGCGGATGGGGGC
GAGGACGGGGCCGGCGGTAGTGCCGCTGGGAAGTCGGACAAGAAGGCCGC
CCCGGCGTCCGTGTCGCGCAAGGCGGTGATGGCCCCAATTGCGAAGGCGG
TCAAGTCTCTCAACAAGGCCACCCAACCGAGGGCTTTCGAGTTCAGCGTG
GGGCACCCCACGGGACTCACCGCTCTCGACGTCGACCTTATCAAGCTCAC
GGCGCAGTTTACGGCGGTGGGGGGGAGAAACTTCCTGGCGGAGCTGGCTA
AGCGAGAGGCCAGGAACGAACAGTTCCAGTTCCTGAAGCACACGCACGCG
CTCTTCAGCTACTTCACAAGCCTGGTAGACGCGTACACCAAGGTTCTCCA
GCCCACCGCGACGCAGCGGGCGTACGTGGAGTCCGGGCGAGATCGACAGC
AAACGCTGGAGCGGTGCGTGCACCGGTGGGAGTTCGACAGGGAGAAGAAG
GCCAAGAAGCAGGCCACGCTGGCCGCGGCAGACGCCGACAGGATAGCCTT
CCGGTCCATCGACTGGCACGACTTCGTGGTCGTCGAGGTGAGGGGGAGGG
GGGAATGA
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