mRNA_E_fasciculatus_S2_contig9339.17394.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN9_ECTSI) HSP 1 Score: 522 bits (1345), Expect = 1.570e-180 Identity = 319/329 (96.96%), Postives = 321/329 (97.57%), Query Frame = 1
Query: 1 MEVETPLAEMPPPSAATAAAVSNGDSAXXXXXXXXXXXXXXXXXXNGGVEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPASVSRKAVMAPIAKAVKSLNKATQPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
MEVETPLAEMPPPSAATAA VSNGDS XXXXXXXXXXXXXXXXX NGGVEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAP+AAPA XXXXXXXXXXXXXXXXXXXXXXX KSDKKAAPASVSRKAVMAPIAKAVKSLNKAT+PRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE
Sbjct: 1 MEVETPLAEMPPPSAATAA-VSNGDSGXXXXXXXXXXXXXXXXXSNGGVEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPRAAPATAAXXXXXXXXXXXXXXXXXXXXXXXAGKSDKKAAPASVSRKAVMAPIAKAVKSLNKATEPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 328
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Surp (module-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C863_9STRA) HSP 1 Score: 316 bits (809), Expect = 7.190e-103 Identity = 190/306 (62.09%), Postives = 217/306 (70.92%), Query Frame = 1
Query: 136 NGG---VEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPASVSRKAVMAPIAKAVKSLNKATQPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYF-------------------TSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
NGG VE QGKVKGII PPP+IRAI DKTARFVAKNGKSFE+RI SEEG+SAKFNFMRPHDPYYAYYE+KIR+ EE D P APA XXXXXXXXXXX + K A A+V +KAVMAPIAKA +++ K +P F FS GHPTGLTA D+DLIKLTAQ+TA GGR FLA LA++EA+NE FQFLK HALFSYF TSLVDAYTKVLQPT Q+A ++G RQ LER VHRWE+DR ++ K++A A DAD++AFRSIDW DFVVVE
Sbjct: 27 NGGAADVEAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAK---------EPGKATAAAAVQKKAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVE 323
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLT9_9STRA) HSP 1 Score: 263 bits (673), Expect = 1.730e-78 Identity = 148/277 (53.43%), Postives = 186/277 (67.15%), Query Frame = 1
Query: 163 GKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEEN-GDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPAS-VSRKAVMAPIAKAVKSLNKATQPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
GKV GIIYPPPDIRA+VDKTA++VA+NGKSFE+RI +SEEGKS+KFNFM+P DPY AYYE +IR FEE G+ P A S AAP + VS+ +V+ PIAKA +A P EF + HP GL LDV++IKLTAQ+TA GR FLA LA+RE RN F+FLK +H LFSYFT+LVDAY KVLQPT QRA V+ G + Q+ LER VHRW +++ + +K+ A +A+R+A++S+DWHDFVVVE
Sbjct: 31 GKVTGIIYPPPDIRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRRFEEGKGEGPAEKKAKIAEASPPAAGETRDGKAVADTGKTPTAVS---AAPTTTVSKASVLGPIAKAALHKPEAPPPPQ-EFYISHPDGLNPLDVEIIKLTAQYTAASGRQFLAALAQREQRNPLFEFLKPSHILFSYFTTLVDAYIKVLQPTDAQRAMVKQGLETQKVLERAVHRWVHEKDDEQRKKHQQAEQEAERVAYQSVDWHDFVVVE 303
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: SWAP/Surp (n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP71_9STRA) HSP 1 Score: 246 bits (628), Expect = 1.750e-71 Identity = 144/277 (51.99%), Postives = 174/277 (62.82%), Query Frame = 1
Query: 163 GKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEEN-GDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPAS-VSRKAVMAPIAKAVKSLNKATQPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
GKV GIIYPPPDIRA+VDKTA++VA+NGKSFE+RI +SEEGKS+KFNFM+P DPY AYYE +IR FEE G+ P A S AAP + VS+ +V+ PIAKA +A P EF + HP GL LDV++IKLTAQ+TA GR FLA LA+RE RN F+FLK +H LFSYFT+LVDAY KVLQPT +QRA V G + Q+ LER VHR R+A++S+DWHDFVVVE
Sbjct: 31 GKVTGIIYPPPDIRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGKGEGPAEKKAKIAEVSPPAAGETRDGKAVADTGETPTAVS---AAPTTTVSKASVLGPIAKAALHKPEAPPPPQ-EFYISHPDGLNPLDVEIIKLTAQYTAASGRQFLAALAQREQRNPLFEFLKPSHILFSYFTTLVDAYIKVLQPTDSQRAMVRQGLETQKVLERAVHRXXXXXXXXXXXXXXXXXXXXXRVAYQSVDWHDFVVVE 303
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SH94_9STRA) HSP 1 Score: 243 bits (619), Expect = 5.070e-71 Identity = 139/281 (49.47%), Postives = 175/281 (62.28%), Query Frame = 1
Query: 154 PYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPASVSRKA-VMAPIAKAVKSLNKATQPRA-FEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVEV 990
P G+V G+I PPPDIRAIVDKTA FVA+NGK FE RIQAS EG+S KF FMRP+DPY AYYEFKIR+ EEN K ++ KAA ++VS++A V AP+ +A++ L + T P + P+ +T LD ++IKLTAQ+TA GR FLA LA+RE RN QF FLK TH LFSYFT LVDAYT+ L P RA V+ D + L+RC RW++ R K++ A DADR +F+++DWHDFVVVEV
Sbjct: 22 PSSGEVTGVIRPPPDIRAIVDKTALFVARNGKQFEARIQASAEGQSQKFAFMRPNDPYNAYYEFKIREVEENDGELKVVEKPKVEAPVT---------------------TEVKAAASTVSKRATVAAPVQRALQGLGEETTPPVPLTAQLTTPSSVTPLDAEIIKLTAQYTAASGRQFLAGLAQREQRNPQFDFLKPTHVLFSYFTQLVDAYTRALAPPPELRAEVKRVEDPEHALKRCARRWDWSRRVDEKERREKALRDADRASFQAVDWHDFVVVEV 281
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZB0_9STRA) HSP 1 Score: 219 bits (557), Expect = 4.150e-65 Identity = 155/278 (55.76%), Postives = 189/278 (67.99%), Query Frame = 1
Query: 160 QGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPASVSRKAVMAPIAKAVKSLNKATQPRAFEFSVG--HPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
QGK+ G+I PPP+IRA+VDKTA FVAK GKSFE+R+ ASEEGK+AKFNFMRP DPY+AYYE KIR+ E XXXXXXXXXXXXXXXXXXXXXXXXXXXX AS+ + PIA+ ++ P EFSV HP GLT DVD IKL AQ+TAV GR FLA LA RE RN QF FLK TH LFSYFT LVD Y K+L P+A + +++ + Q +E V RW++ R + +++ + A+R+AF++IDW DF VVE
Sbjct: 8 QGKITGVIIPPPEIRAVVDKTAAFVAKIGKSFEQRVLASEEGKTAKFNFMRPFDPYHAYYEMKIREGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVKASI-----LNPIAQLAQTKPTEASPE-LEFSVANSHPAGLTPFDVDAIKLAAQYTAVNGREFLANLALREQRNPQFDFLKPTHMLFSYFTYLVDCYAKILHPSAALKDTIDAKGNYQTAMESAVRRWQWTRAEAERRRMENSEDSAERLAFQAIDWFDFTVVE 279
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYH2_GLOUD) HSP 1 Score: 216 bits (550), Expect = 9.710e-61 Identity = 154/290 (53.10%), Postives = 200/290 (68.97%), Query Frame = 1
Query: 160 QGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDF-EENG-DAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPAS----VSRKAVMAPIAKAVKSLNKA--TQPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTAT------QRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
QG+V G+I PPPDIRA+VDKTA+FVA+NG+SFE +I E SAKF+F++P DPY+AYYE K+ ++ E+N +A A XXXXXXXXXXXXXXXXXXXXXXX +D+ A P + V +KAV AK K L + T P +F + HP L+ALD +++ LTAQ+TA+ G+ FLA LA RE RN QF FLK THALF+YFT+LV++YT+VL PT Q +E G DR + L+RCVH+ E+ R ++ +K A A +DA+R+A IDWHDFVVVE
Sbjct: 14 QGRVTGLIVPPPDIRAVVDKTAQFVARNGRSFERKIAG--ETVSAKFSFLKPSDPYHAYYEHKVSEWIEQNAQEAENPTVAQEEAQXXXXXXXXXXXXXXXXXXXXXXXATDEPADPVNALVVVEKKAVETVTAKVAKKLKEKALTPPEPEKFKIKHPQ-LSALDQEIMYLTAQYTALSGKTFLAGLATREQRNPQFDFLKPTHALFAYFTALVESYTQVLAPTRENDEQQQQMKRIEEGMDRMKVLDRCVHKLEWVRTEQERKDAEAAESDAERLALAQIDWHDFVVVE 300
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4YYN6_9STRA) HSP 1 Score: 209 bits (532), Expect = 4.850e-60 Identity = 138/294 (46.94%), Postives = 186/294 (63.27%), Query Frame = 1
Query: 136 NGGVEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPASVSRKAVMAPIAKAVKSLNKATQPRAFE-FSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYV---------ESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
NG V G+V GIIYPPP+IRA+VDKTA+FVA+NG+SFE +I E SAKF+F++P+DPY+AYYE K+ +FE + P+ A + XXXXXXXXXXXX K V +K + A ++K+++ + QP A E F HPT LT LD +++ LTAQ+TAV G+ FL+ LA RE RN QF FLK TH LF+YFT LV++Y K+L A + + E+G DR Q L+RCVH+ E+ R ++ KQ DA+++A++ IDWHDFVVVE
Sbjct: 8 NGAVH----GRVTGIIYPPPEIRAVVDKTAQFVARNGRSFERKIAG--EVISAKFSFLKPNDPYHAYYEHKVEEFETQLNEPEPAKSPAAXXXXXXXXXXXXAPAALP-------SEPAKIEVGVVEKKPIEAVVSKSLQKIKDKNQPPAEEQFKQKHPT-LTPLDQEIMYLTAQYTAVSGKPFLSGLATREQRNPQFDFLKPTHPLFAYFTFLVESYAKILTAKAQENKKMSGNVLIEALEAGMDRMQVLDRCVHKHEWMRREEEDKQKEAMETDAEKLAYQQIDWHDFVVVE 287
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Uncharacterized (protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G7N8_9STRA) HSP 1 Score: 211 bits (537), Expect = 2.830e-59 Identity = 125/285 (43.86%), Postives = 169/285 (59.30%), Query Frame = 1
Query: 160 QGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDF-------EENGDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPASVSRKAVMAPIAKAVKSLNKAT--QPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
QGKV GIIYPPPDIRA+VDKTA+FVA+NG++FE R+ E S KF+F++P DPY+ YYEFK+ +F EEN + + K++ +KAV AK + LN+ T P + + HPT L+ALD +++ LTAQ+TA G++FLA LA RE RN QF FLK THALF+YFT+LV++Y +VL + Q +E G R + L+RCVHR E+ R + K+ +A +DA+R+A IDWHDFVVVE
Sbjct: 21 QGKVTGIIYPPPDIRAVVDKTAQFVARNGRNFERRLAG--ETSSTKFSFLKPSDPYHTYYEFKVNEFTEKDFVIEENKKSQENETTDEHSTEHSASAKPLEKSTNAESGSNAGSKNE-----VIFEKKAVETLTAKVSRKLNEKTVEPPPPELYKIQHPT-LSALDQEIMYLTAQYTAHSGKSFLAGLATREQRNPQFDFLKPTHALFAYFTALVESYAQVLSKSKEQMHRIEEGMSRMKVLDRCVHRMEWMRMEHEKQAKEVAESDAERLALAQIDWHDFVVVE 297
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Match: Uncharacterized (protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJM3_9STRA) HSP 1 Score: 208 bits (529), Expect = 7.620e-59 Identity = 125/278 (44.96%), Postives = 169/278 (60.79%), Query Frame = 1
Query: 160 QGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDKKAAPASVSRKAVMAPIAKAVKSLN-KATQPRAFE-FSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVE 987
QG+V GIIYPPPDIRA+VDKTA+FVA NG++FE RI E SAKF+F+R DPY+AYYE K+ +F K + + X K+ + + V +KAV AK K + KA +P E F + HP+ L+ALD +++ LTAQ+TA+ G +FL+ LA RE RN QF FLK TH LF+YFT+LV++YT+VL Q +E G +R + L+RCVHR E+ R ++ +K A +DA+R A +DWHDFVVVE
Sbjct: 14 QGRVTGIIYPPPDIRAVVDKTAQFVANNGRAFESRIVG--ERMSAKFSFLRDSDPYHAYYEHKVSEF-----IAKKSQSAEEDHQETEQEXEEAQPTVEKLKAEEVVKAAETSGDVVVEKKAVQDVTAKVAKKIKEKALEPPPEEKFIIKHPS-LSALDQEIMYLTAQYTALSGSSFLSGLATREQRNPQFDFLKPTHPLFAYFTALVESYTQVLGKADAQMKRIEEGVERMKVLDRCVHRMEWQRTEQERKDKEAAESDAERRALAQVDWHDFVVVE 283 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9339.17394.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9339.17394.1 >prot_E_fasciculatus_S2_contig9339.17394.1 ID=prot_E_fasciculatus_S2_contig9339.17394.1|Name=mRNA_E_fasciculatus_S2_contig9339.17394.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=336bp MEVETPLAEMPPPSAATAAAVSNGDSAAAVEGNGEAAAEGNGESSNGGVEback to top mRNA from alignment at E_fasciculatus_S2_contig9339:502..4959+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9339.17394.1 ID=mRNA_E_fasciculatus_S2_contig9339.17394.1|Name=mRNA_E_fasciculatus_S2_contig9339.17394.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4458bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9339:502..4959+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9339:502..4959+ >mRNA_E_fasciculatus_S2_contig9339.17394.1 ID=mRNA_E_fasciculatus_S2_contig9339.17394.1|Name=mRNA_E_fasciculatus_S2_contig9339.17394.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1008bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9339:502..4959+ (Ectocarpus fasciculatus EfasUO2)back to top |