mRNA_E_fasciculatus_S2_contig933.17390.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig933.17390.1 vs.
Match: DAO (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEA9_9PHAE) HSP 1 Score: 188 bits (478), Expect = 1.680e-53 Identity = 100/107 (93.46%), Postives = 103/107 (96.26%), Query Frame = 1
Query: 1 GRLARPMAMLGPTMSDVRIHKDVVVIGGGLAGLSTALELAKRGKQVTVLSRNRAEAAAEAAGGMIAPQAERLESGPYLDLCLTSRAMYAEWVRSMEAIAGMGGEKAG 321
GRL+R M MLG T+SDVRIHKDVVVIGGGLAGLSTALELAKRGKQVTVLSRNRAEAAAEAAGGMIAPQAERLESGPYLDLCLTSRAMYAEWVRS+EAIAGMGGE AG
Sbjct: 31 GRLSRSMVMLGSTISDVRIHKDVVVIGGGLAGLSTALELAKRGKQVTVLSRNRAEAAAEAAGGMIAPQAERLESGPYLDLCLTSRAMYAEWVRSIEAIAGMGGETAG 137
BLAST of mRNA_E_fasciculatus_S2_contig933.17390.1 vs.
Match: Glycine (oxidase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U8T7_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.990e-25 Identity = 59/100 (59.00%), Postives = 75/100 (75.00%), Query Frame = 1
Query: 7 LARPMAMLGPTMSDVRIHKD------VVVIGGGLAGLSTALELAKRGKQVTVLSRNRAEAAAEAAGGMIAPQAERLESGPYLDLCLTSRAMYAEWVRSME 288
L R +A + P S + +D V+VIGGGLAGLSTALEL++RG +V V+SR+ AE+A+ AAGGM+APQAERLE+GPYLDLCL SR MY+EW +E
Sbjct: 54 LHRSVARIRPQGSSLMAKRDAPGGGDVLVIGGGLAGLSTALELSQRGAKVVVVSRDEAESASMAAGGMLAPQAERLEAGPYLDLCLQSRDMYSEWAADLE 153
BLAST of mRNA_E_fasciculatus_S2_contig933.17390.1 vs.
Match: DAO (domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DFC1_9STRA) HSP 1 Score: 108 bits (269), Expect = 4.120e-25 Identity = 54/75 (72.00%), Postives = 66/75 (88.00%), Query Frame = 1
Query: 64 DVVVIGGGLAGLSTALELAKRGKQVTVLSRNRAEAAAEAAGGMIAPQAERLESGPYLDLCLTSRAMYAEWVRSME 288
DV+VIGGGLAGLSTALEL++RG +V V+SR+ AE+A+ AAGGM+APQAERLE+GPYLDLCL SR MY+EW +E
Sbjct: 11 DVLVIGGGLAGLSTALELSQRGAKVVVVSRDEAESASMAAGGMLAPQAERLEAGPYLDLCLQSRDMYSEWAADLE 85
BLAST of mRNA_E_fasciculatus_S2_contig933.17390.1 vs.
Match: glycine (oxidase ThiO n=1 Tax=Acaryochloris sp. CCMEE 5410 TaxID=310037 RepID=UPI0002483A50) HSP 1 Score: 100 bits (248), Expect = 8.250e-23 Identity = 48/80 (60.00%), Postives = 68/80 (85.00%), Query Frame = 1
Query: 64 DVVVIGGGLAGLSTALELAKRGKQVTVLSRNRAEAAAEAAGGMIAPQAERLESGPYLDLCLTSRAMYAEWVRSMEAIAGM 303
+V+VIGGGL GL+TA+ELA++G +VTV++R EAA ++A GM+APQAERL SGP LDLCL SR++YA+WV+++E + G+
Sbjct: 6 EVLVIGGGLIGLATAVELAQQGVEVTVITRKLCEAATQSAAGMLAPQAERLSSGPLLDLCLRSRSLYADWVQTLENLTGL 85
BLAST of mRNA_E_fasciculatus_S2_contig933.17390.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WY37_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 3.180e-21 Identity = 52/97 (53.61%), Postives = 71/97 (73.20%), Query Frame = 1
Query: 7 LARPMAMLGPTMSDVRIHK--DVVVIGGGLAGLSTALELAKRGKQVTVLSRNRAEAAAEAAGGMIAPQAERLESGPYLDLCLTSRAMYAEWVRSMEA 291
L A L PT + V K DVVV+GGG++GL+TALELA+RG+ V V+SR+ A++A AAGGM+APQAERLE GP LDLC+ +R + W+ +++A
Sbjct: 8 LVTTAAALRPTQTRVSTTKKLDVVVVGGGISGLATALELARRGRSVRVVSRDLAKSATLAAGGMLAPQAERLEEGPLLDLCVQAREAWPSWLDTLDA 104
BLAST of mRNA_E_fasciculatus_S2_contig933.17390.1 vs.
Match: Bifunctional (protein ThiO/ThiG n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2J0_PORPP) HSP 1 Score: 96.7 bits (239), Expect = 4.460e-21 Identity = 49/78 (62.82%), Postives = 62/78 (79.49%), Query Frame = 1
Query: 64 DVVVIGGGLAGLSTALELAKRGKQVTVLSRNRAEAAAEAAGGMIAPQAERLESGPYLDLCLTSRAMYAEWVRSMEAIA 297
DVVV+G G+ GL+ A+ELA+RG VTVLSR AE+A AA GM+APQ+E++E GP LDLCL SR MYA+WVR + A+A
Sbjct: 76 DVVVVGAGIHGLACAVELARRGAVVTVLSRELAESATRAAAGMLAPQSEQIEQGPLLDLCLRSRDMYADWVRMVSALA 153
BLAST of mRNA_E_fasciculatus_S2_contig933.17390.1 vs.
Match: Thiazole (synthase (Fragment) n=1 Tax=filamentous cyanobacterium CCP2 TaxID=2107700 RepID=A0A2T1CZ24_9CYAN) HSP 1 Score: 89.7 bits (221), Expect = 4.790e-21 Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 61 KDVVVIGGGLAGLSTALELAKRGKQVTVLSRNRAEAAAEAAGGMIAPQAERLESGPYLDLCLTSRAMYAEWVRSMEAIAG 300
KDVV++GGG+ GLS A+EL RG VTVLSR+ +AAA AA GM+AP AE + S P LDLCL S+A Y +WV +E ++G
Sbjct: 5 KDVVIVGGGIVGLSIAVELKLRGATVTVLSRDAQQAAAYAAAGMLAPAAENISSSPMLDLCLKSQARYPDWVGKLEDLSG 84
BLAST of mRNA_E_fasciculatus_S2_contig933.17390.1 vs.
Match: FAD-dependent (oxidoreductase n=1 Tax=Pseudanabaenaceae cyanobacterium LEGE 13415 TaxID=2777976 RepID=UPI0019EEE1DF) HSP 1 Score: 94.7 bits (234), Expect = 6.290e-21 Identity = 45/81 (55.56%), Postives = 62/81 (76.54%), Query Frame = 1
Query: 61 KDVVVIGGGLAGLSTALELAKRGKQVTVLSRNRAEAAAEAAGGMIAPQAERLESGPYLDLCLTSRAMYAEWVRSMEAIAGM 303
+++++IGGG+ GLS A+EL +G VT+LSR+ +EAA AA GMIAPQAE + P LDLCL SRA+Y +W+R +EA+ GM
Sbjct: 5 REILIIGGGIIGLSIAIELKSQGVPVTILSRDFSEAATHAAAGMIAPQAEEIPPSPMLDLCLASRALYPDWIRKLEALTGM 85
BLAST of mRNA_E_fasciculatus_S2_contig933.17390.1 vs.
Match: Glycine (oxidase ThiO n=1 Tax=Leptolyngbya sp. 'hensonii' TaxID=1922337 RepID=A0A1Q8ZJH9_9CYAN) HSP 1 Score: 94.7 bits (234), Expect = 6.360e-21 Identity = 48/80 (60.00%), Postives = 61/80 (76.25%), Query Frame = 1
Query: 64 DVVVIGGGLAGLSTALELAKRGKQVTVLSRNRAEAAAEAAGGMIAPQAERLESGPYLDLCLTSRAMYAEWVRSMEAIAGM 303
+++VIGGG+ GLS A+EL RG VT++SRN EAAA AA GM+APQAE + SGP LDLCL SRA+Y EWV +E + G+
Sbjct: 4 EIIVIGGGIMGLSIAIELRLRGMIVTLISRNVREAAAYAAAGMLAPQAEAIPSGPMLDLCLRSRALYPEWVGKLETLTGL 83
BLAST of mRNA_E_fasciculatus_S2_contig933.17390.1 vs.
Match: glycine (oxidase ThiO n=1 Tax=Oscillatoria sp. FACHB-1406 TaxID=2692846 RepID=UPI00168499E4) HSP 1 Score: 94.7 bits (234), Expect = 6.970e-21 Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 1
Query: 67 VVVIGGGLAGLSTALELAKRGKQVTVLSRNRAEAAAEAAGGMIAPQAERLESGPYLDLCLTSRAMYAEWVRSMEAIAGM 303
++VIGGG+ GLS A+EL RG VTVLS + EAA A GMIAPQAER+ P L+LCL SRAMYA+W+R +EAIAG+
Sbjct: 1 MIVIGGGIIGLSVAIELRLRGVSVTVLSHDAREAAGFVAAGMIAPQAERIPPSPMLELCLRSRAMYADWIRKLEAIAGL 79 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig933.17390.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig933.17390.1 >prot_E_fasciculatus_S2_contig933.17390.1 ID=prot_E_fasciculatus_S2_contig933.17390.1|Name=mRNA_E_fasciculatus_S2_contig933.17390.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=103bp MAMLGPTMSDVRIHKDVVVIGGGLAGLSTALELAKRGKQVTVLSRNRAEAback to top mRNA from alignment at E_fasciculatus_S2_contig933:24534..24860+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig933.17390.1 ID=mRNA_E_fasciculatus_S2_contig933.17390.1|Name=mRNA_E_fasciculatus_S2_contig933.17390.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=327bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig933:24534..24860+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig933:24534..24860+ >mRNA_E_fasciculatus_S2_contig933.17390.1 ID=mRNA_E_fasciculatus_S2_contig933.17390.1|Name=mRNA_E_fasciculatus_S2_contig933.17390.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=309bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig933:24534..24860+ (Ectocarpus fasciculatus EfasUO2)back to top |