mRNA_E_fasciculatus_S2_contig9323.17383.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9323.17383.1
Unique NamemRNA_E_fasciculatus_S2_contig9323.17383.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9323.17383.1 vs.
Match: Glutamate (synthase (Ferredoxin-dependent) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB71_ECTSI)

HSP 1 Score: 736 bits (1900), Expect = 7.560e-251
Identity = 379/400 (94.75%), Postives = 382/400 (95.50%), Query Frame = 1 
Query:    1 RFCTGGMSLGALSREAHETLAVALNRIGGKSNSGEGGEDPVRFLPIEDVSAESGESTSFPHLKELKNGDLAASAIKQVASGRFGVTPEYL-----IEIKMAQGAKPGEGGQLPGAKISEYIASLRASKPGVTLISPPPHHDIYSIEDLSQLIFDLHQINPDAGVSVKLVSEVGIGTVAAGVAKANADVIQVSGHDGGTGASPLSSIKHAGSPWELGLAEVHRTLLDNKLRDRVLLRTDGGIKTGWDVVIAALMGAEEFGFGTIAMIAEGCIMARICHTNNCPVGVTTQKEKLRKRFPGTPQNVVTFFEACILARYRKFVAEEVRLLLAELGFKSLDEAIGRADVLSARTDAPLAKTNAALDLDFITNLPDVSQDRSWLQHGKPHGNGPVLDDEILADADV 1185
            RFCTGGMSLGALSREAHETLAVALNRIGGKSNSGEGGEDPVRF PIEDVSAESGESTSFPHLKELKNGDLAASAIKQVASGRFGVTPEYL     IEIKMAQGAKPGEGGQLPG KISEYIASLRASKPGVTLISPPPHHDIYSIEDLSQLIFDLHQINPDAGVSVKLVSEVGIGTVAAGVAKANADVIQVSGHDGGTGASPLSSIKHAGSPWELGLAEVHRTLLDNKLRDRVLLRTDGGIKTGWDVVIAALMGAEEFGFGTIAMIAEGCIMARICHTNNCPVGVTTQKE LRK+FPGTPQNVVTFFE         FVAEEVRLLLAELGFKSLDEAIGRADVLSARTDAPLAKTNAAL+LDFIT LPDVSQDRSWLQHGKPHGNGPVLDDEILADAD+
Sbjct:  953 RFCTGGMSLGALSREAHETLAVALNRIGGKSNSGEGGEDPVRFRPIEDVSAESGESTSFPHLKELKNGDLAASAIKQVASGRFGVTPEYLVSAEQIEIKMAQGAKPGEGGQLPGPKISEYIASLRASKPGVTLISPPPHHDIYSIEDLSQLIFDLHQINPDAGVSVKLVSEVGIGTVAAGVAKANADVIQVSGHDGGTGASPLSSIKHAGSPWELGLAEVHRTLLDNKLRDRVLLRTDGGIKTGWDVVIAALMGAEEFGFGTIAMIAEGCIMARICHTNNCPVGVTTQKENLRKKFPGTPQNVVTFFE---------FVAEEVRLLLAELGFKSLDEAIGRADVLSARTDAPLAKTNAALNLDFITKLPDVSQDRSWLQHGKPHGNGPVLDDEILADADL 1343
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9323.17383.1 vs.
Match: Glutamate (synthase subunit alpha (Fragment) n=1 Tax=filamentous cyanobacterium Phorm 6 TaxID=2107706 RepID=A0A2T1F5T1_9CYAN)

HSP 1 Score: 591 bits (1524), Expect = 8.580e-206
Identity = 301/400 (75.25%), Postives = 340/400 (85.00%), Query Frame = 1 
Query:    1 RFCTGGMSLGALSREAHETLAVALNRIGGKSNSGEGGEDPVRFLPIEDVSAESGESTSFPHLKELKNGDLAASAIKQVASGRFGVTPEYL-----IEIKMAQGAKPGEGGQLPGAKISEYIASLRASKPGVTLISPPPHHDIYSIEDLSQLIFDLHQINPDAGVSVKLVSEVGIGTVAAGVAKANADVIQVSGHDGGTGASPLSSIKHAGSPWELGLAEVHRTLLDNKLRDRVLLRTDGGIKTGWDVVIAALMGAEEFGFGTIAMIAEGCIMARICHTNNCPVGVTTQKEKLRKRFPGTPQNVVTFFEACILARYRKFVAEEVRLLLAELGFKSLDEAIGRADVLSARTDAPLAKTNAALDLDFITNLPDVSQDRSWLQHGKPHGNGPVLDDEILADADV 1185
            RF TGGMSLGALS EAHETLA+A+NRIGGKSNSGEGGEDPVR+  ++DVS E+G S + PHLK L+NGD A+SAIKQVASGRFGVTPEYL     IEIK+AQGAKPGEGGQLPG K+SEYIA LR SKPGVTLISPPPHHDIYSIEDL+QLIFDLHQINP AGVSVKLVSEVGIGTVAAGVAKANADVIQ+SGHDGGTGASPLSSIKHAGSPWELGL EVHR L++N LRDRVLLR DGG KTGWDV++ ALMGAEE+GFGT+AMIAEGCIMAR+CH N CPVGVTTQKE+LRKRFPGTP++VV FF          FVA+EV+ LLA+LG+KS+ + IGR D+L+ R    L KT A ++LD +  LPD   DRS+L HG  H NGPVLDD++LADA++
Sbjct:   41 RFATGGMSLGALSPEAHETLAIAMNRIGGKSNSGEGGEDPVRYKVLKDVS-EAGFSQTLPHLKGLQNGDTASSAIKQVASGRFGVTPEYLMNAKQIEIKVAQGAKPGEGGQLPGPKVSEYIAYLRRSKPGVTLISPPPHHDIYSIEDLAQLIFDLHQINPKAGVSVKLVSEVGIGTVAAGVAKANADVIQISGHDGGTGASPLSSIKHAGSPWELGLTEVHRVLMENNLRDRVLLRVDGGFKTGWDVIVGALMGAEEYGFGTVAMIAEGCIMARVCHMNTCPVGVTTQKEELRKRFPGTPEHVVNFFY---------FVAQEVQSLLAKLGYKSIADIIGRGDLLTMRAGVKLTKTQA-INLDCLIKLPDTKHDRSFLIHGDIHTNGPVLDDDLLADAEI 429
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9323.17383.1 vs.
Match: glutamate (synthase large subunit n=1 Tax=Leptothoe kymatousa TaxID=2651727 RepID=UPI001C034D82)

HSP 1 Score: 612 bits (1578), Expect = 1.160e-203
Identity = 312/400 (78.00%), Postives = 343/400 (85.75%), Query Frame = 1 
Query:    1 RFCTGGMSLGALSREAHETLAVALNRIGGKSNSGEGGEDPVRFLPIEDVSAESGESTSFPHLKELKNGDLAASAIKQVASGRFGVTPEYL-----IEIKMAQGAKPGEGGQLPGAKISEYIASLRASKPGVTLISPPPHHDIYSIEDLSQLIFDLHQINPDAGVSVKLVSEVGIGTVAAGVAKANADVIQVSGHDGGTGASPLSSIKHAGSPWELGLAEVHRTLLDNKLRDRVLLRTDGGIKTGWDVVIAALMGAEEFGFGTIAMIAEGCIMARICHTNNCPVGVTTQKEKLRKRFPGTPQNVVTFFEACILARYRKFVAEEVRLLLAELGFKSLDEAIGRADVLSARTDAPLAKTNAALDLDFITNLPDVSQDRSWLQHGKPHGNGPVLDDEILADADV 1185
            RFCTGGMSLGALSREAHETLA+A+NRIGGKSNSGEGGED VRF PI DV  + G S + PHLK LK GD A SAIKQVASGRFGVTPEYL     IEIKMAQGAKPGEGGQLPG K+S+YIASLR SKPGVTLISPPPHHDIYSIEDL+QLI+DLHQINP AGVSVKLVSE+GIGT+AAGVAKANADVIQVSGHDGGTGASPLSSIKHAG PWELGL EVHR LL+N+LRDRVLLR DGGIKTGWDV++ ALMGAEE+GFGTIAMIAEGCIMAR+CHTN+CPVGVTTQ+E+LRKRF G P++VV FF          FVAEEVR LLA LG++SL E IGRAD+L+AR +A LAKT   L LD +T+LPD   DRSWL HG  H NGPVLDD++LADA+V
Sbjct:  900 RFCTGGMSLGALSREAHETLAIAMNRIGGKSNSGEGGEDTVRFAPINDVD-DHGLSATLPHLKGLKPGDTACSAIKQVASGRFGVTPEYLMSAKQIEIKMAQGAKPGEGGQLPGRKVSDYIASLRRSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPGAGVSVKLVSEIGIGTIAAGVAKANADVIQVSGHDGGTGASPLSSIKHAGVPWELGLTEVHRVLLENQLRDRVLLRVDGGIKTGWDVIMGALMGAEEYGFGTIAMIAEGCIMARVCHTNSCPVGVTTQREELRKRFTGIPEHVVNFFH---------FVAEEVRALLAHLGYRSLSEVIGRADLLTARAEASLAKTQG-LVLDILTHLPDTRSDRSWLNHGDIHSNGPVLDDQLLADAEV 1288
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9323.17383.1 vs.
Match: Glutamate (synthase subunit alpha (Fragment) n=1 Tax=Leptolyngbya sp. SIO1D8 TaxID=2607807 RepID=A0A6G3Z3K7_9CYAN)

HSP 1 Score: 592 bits (1525), Expect = 2.020e-202
Identity = 299/400 (74.75%), Postives = 339/400 (84.75%), Query Frame = 1 
Query:    1 RFCTGGMSLGALSREAHETLAVALNRIGGKSNSGEGGEDPVRFLPIEDVSAESGESTSFPHLKELKNGDLAASAIKQVASGRFGVTPEYL-----IEIKMAQGAKPGEGGQLPGAKISEYIASLRASKPGVTLISPPPHHDIYSIEDLSQLIFDLHQINPDAGVSVKLVSEVGIGTVAAGVAKANADVIQVSGHDGGTGASPLSSIKHAGSPWELGLAEVHRTLLDNKLRDRVLLRTDGGIKTGWDVVIAALMGAEEFGFGTIAMIAEGCIMARICHTNNCPVGVTTQKEKLRKRFPGTPQNVVTFFEACILARYRKFVAEEVRLLLAELGFKSLDEAIGRADVLSARTDAPLAKTNAALDLDFITNLPDVSQDRSWLQHGKPHGNGPVLDDEILADADV 1185
            RFCTGGMSLGALS+EAHE LA+A+NRIGGKSNSGEGGEDP RF  ++DV  E G+S  FP+LK L+NGD A+SAIKQVASGRFGVTPEYL     IEIK+AQGAKPGEGGQLPG K+S YIA LR SKPGV LISPPPHHDIYSIEDL+QLIFDLHQINP AGVSVKLV+E+GIGT+AAGVAKANADVIQ+SGHDGGTGASPLSSIKHAG PWELGL EVHR LL+N+LRDRVLLR DGG+KTGWDV++ ALMGAEEFGFG+IAMIAEGCIMAR+CHTNNCPVGV TQKE LRKRF G P++VV FF          F+AEEVR LLA LG++SL E  GR D+L+ RT+  L KT+A L+L  + NLP+V  +R+WL HG+ H NGPVLDDE+LADAD+
Sbjct:  295 RFCTGGMSLGALSQEAHEVLAIAMNRIGGKSNSGEGGEDPRRFNVLQDVD-EQGKSPLFPNLKGLRNGDTASSAIKQVASGRFGVTPEYLMHAQQIEIKVAQGAKPGEGGQLPGKKVSPYIAMLRRSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQINPQAGVSVKLVAEIGIGTIAAGVAKANADVIQISGHDGGTGASPLSSIKHAGLPWELGLTEVHRVLLENQLRDRVLLRVDGGLKTGWDVLMGALMGAEEFGFGSIAMIAEGCIMARVCHTNNCPVGVATQKEALRKRFTGLPEHVVNFFA---------FIAEEVRSLLARLGYRSLSEITGRTDLLTQRTEVTLTKTDA-LNLSALLNLPNVQHERAWLDHGEIHSNGPVLDDEMLADADI 683
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9323.17383.1 vs.
Match: Glutamate (synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTV2_9STRA)

HSP 1 Score: 610 bits (1574), Expect = 2.600e-202
Identity = 313/402 (77.86%), Postives = 345/402 (85.82%), Query Frame = 1 
Query:    1 RFCTGGMSLGALSREAHETLAVALNRIGGKSNSGEGGEDPVRFLPIEDVSAESGESTSFPHLKELKNGDLAASAIKQVASGRFGVTPEYL-----IEIKMAQGAKPGEGGQLPGAKISEYIASLRASKPGVTLISPPPHHDIYSIEDLSQLIFDLHQINPDAGVSVKLVSEVGIGTVAAGVAKANADVIQVSGHDGGTGASPLSSIKHAGSPWELGLAEVHRTLLDNKLRDRVLLRTDGGIKTGWDVVIAALMGAEEFGFGTIAMIAEGCIMARICHTNNCPVGVTTQKEKLRKRFPGTPQNVVTFFEACILARYRKFVAEEVRLLLAELGFKSLDEAIGRADVLSARTDAPLAKTNAALDLDFITNLPDVS--QDRSWLQHGKPHGNGPVLDDEILADADV 1185
            RFCTGGMSLGALSREAHETLA+ +NR+G KSNSGEGGEDP+RF  IEDV  E G S SFPHLK L+NGD A SAIKQVASGRFGVTPEYL     IEIKMAQGAKPGEGGQLPG KI +YIA LRASKPGVTLISPPPHHDIYSIEDL+QLI+DLHQINP AGVSVKLVSEVGIGTVAAGVAKANAD+IQ+SGHDGGTGASPLSSIKHAGSPWELGL EVH+TLLDN LR+R LLR DGG+KTGWDV++AALMGAEE+GFGTIAMIAEGCIMARICHTN CPVGVTTQ+E LRK+FPGTP NV TFF+         FVAEEVRLLLA++G++SL E IGRAD+L+ R D  L K++  L+LDFIT LPDV+    R+WL+HG  H NGPVLDDE+LAD  V
Sbjct:  962 RFCTGGMSLGALSREAHETLAIGVNRVGAKSNSGEGGEDPMRFGTIEDVD-EEGNSQSFPHLKGLRNGDRAGSAIKQVASGRFGVTPEYLMSARQIEIKMAQGAKPGEGGQLPGPKIDDYIARLRASKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPAAGVSVKLVSEVGIGTVAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGLTEVHKTLLDNNLRERTLLRVDGGLKTGWDVLLAALMGAEEYGFGTIAMIAEGCIMARICHTNGCPVGVTTQREDLRKKFPGTPDNVATFFQ---------FVAEEVRLLLAKMGYRSLSELIGRADLLAPRADVTLRKSDM-LNLDFITALPDVTAADARTWLEHGPVHENGPVLDDELLADPAV 1352
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9323.17383.1 vs.
Match: Glutamate (synthase subunit alpha n=1 Tax=Leptolyngbyaceae cyanobacterium LF-bin-113 TaxID=2804780 RepID=UPI0019829AE4)

HSP 1 Score: 585 bits (1509), Expect = 1.770e-201
Identity = 297/400 (74.25%), Postives = 336/400 (84.00%), Query Frame = 1 
Query:    1 RFCTGGMSLGALSREAHETLAVALNRIGGKSNSGEGGEDPVRFLPIEDVSAESGESTSFPHLKELKNGDLAASAIKQVASGRFGVTPEYL-----IEIKMAQGAKPGEGGQLPGAKISEYIASLRASKPGVTLISPPPHHDIYSIEDLSQLIFDLHQINPDAGVSVKLVSEVGIGTVAAGVAKANADVIQVSGHDGGTGASPLSSIKHAGSPWELGLAEVHRTLLDNKLRDRVLLRTDGGIKTGWDVVIAALMGAEEFGFGTIAMIAEGCIMARICHTNNCPVGVTTQKEKLRKRFPGTPQNVVTFFEACILARYRKFVAEEVRLLLAELGFKSLDEAIGRADVLSARTDAPLAKTNAALDLDFITNLPDVSQDRSWLQHGKPHGNGPVLDDEILADADV 1185
            RFCTGGMSLGALSREAHE LA+A+NRIGGKSNSGEGGEDPVRF  ++DV  + G S   PHLK L+N D A+SAIKQVASGRFGVTPEYL     IEIK+AQGAKPGEGGQLPG K+S YIA LR SKPGVTLISPPPHHDIYSIEDLSQLIFDLHQINP A VSVKLV+EVGIGT+AAGVAKANAD+IQ+SGHDGGTGASPLSSIKHAGSPWELGL EVHR L++N+LRDRVLLR DGGIKTGWD+++AALMG EE+GFG+IAMIAEGCIMARICHTNNCPVGV +QKE+LRKRFPGTP+ VV FF          FVAEEVR LLA LG+ +L+E IGR+D+L  R    + KT + L+L+ +T LPD  Q+R WL+H   H NG VLDDE+L+DAD+
Sbjct:  186 RFCTGGMSLGALSREAHEVLAIAMNRIGGKSNSGEGGEDPVRFNVLKDVD-DQGLSPLLPHLKGLRNNDTASSAIKQVASGRFGVTPEYLMSAKQIEIKIAQGAKPGEGGQLPGPKVSPYIAMLRRSKPGVTLISPPPHHDIYSIEDLSQLIFDLHQINPVAQVSVKLVAEVGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGLTEVHRVLMENQLRDRVLLRVDGGIKTGWDIIMAALMGGEEYGFGSIAMIAEGCIMARICHTNNCPVGVASQKEELRKRFPGTPEQVVNFFY---------FVAEEVRSLLARLGYHTLNEIIGRSDLLKVRESVHITKTKS-LNLNCLTQLPDTRQNRDWLKHESVHSNGVVLDDELLSDADI 574
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9323.17383.1 vs.
Match: Glutamate (synthase large subunit n=5 Tax=Leptolyngbyaceae TaxID=1890438 RepID=A0A6M0S4R1_9CYAN)

HSP 1 Score: 605 bits (1561), Expect = 3.760e-201
Identity = 307/400 (76.75%), Postives = 341/400 (85.25%), Query Frame = 1 
Query:    1 RFCTGGMSLGALSREAHETLAVALNRIGGKSNSGEGGEDPVRFLPIEDVSAESGESTSFPHLKELKNGDLAASAIKQVASGRFGVTPEYL-----IEIKMAQGAKPGEGGQLPGAKISEYIASLRASKPGVTLISPPPHHDIYSIEDLSQLIFDLHQINPDAGVSVKLVSEVGIGTVAAGVAKANADVIQVSGHDGGTGASPLSSIKHAGSPWELGLAEVHRTLLDNKLRDRVLLRTDGGIKTGWDVVIAALMGAEEFGFGTIAMIAEGCIMARICHTNNCPVGVTTQKEKLRKRFPGTPQNVVTFFEACILARYRKFVAEEVRLLLAELGFKSLDEAIGRADVLSARTDAPLAKTNAALDLDFITNLPDVSQDRSWLQHGKPHGNGPVLDDEILADADV 1185
            RFCTGGMSLGALSREAHETLA+A+NRIGGKSNSGEGGED VRF PI DV  ++G S + PHLK LK GD A SAIKQVASGRFGVTPEYL     IEIKMAQGAKPGEGGQLPG K+S+YIASLR SKPGVTLISPPPHHDIYSIEDL+QLIFDLHQINP AGVSVKLVSE+GIGT+AAGVAKANAD+IQVSGHDGGTGASPLSSIKHAG PWELGL EVHR L++N+LRDRVLLR DGG+KTGWDVV+ ALMGAEE+GFGTIAMIAEGCIMAR+CHTN+CPVGVTTQ+E+LRKRF G P++VV FF          FVAEEVR LLA LG++SL+E IGRAD+L+ R DA L KT   L L+ IT LPD   DR+WL HG  H NGPVLDD +LA+A++
Sbjct:  900 RFCTGGMSLGALSREAHETLAIAMNRIGGKSNSGEGGEDTVRFQPINDVD-DNGLSATLPHLKGLKPGDTACSAIKQVASGRFGVTPEYLMSAKQIEIKMAQGAKPGEGGQLPGRKVSDYIASLRRSKPGVTLISPPPHHDIYSIEDLAQLIFDLHQINPTAGVSVKLVSEIGIGTIAAGVAKANADIIQVSGHDGGTGASPLSSIKHAGVPWELGLTEVHRVLMENQLRDRVLLRVDGGLKTGWDVVMGALMGAEEYGFGTIAMIAEGCIMARVCHTNSCPVGVTTQREELRKRFTGVPEHVVNFFH---------FVAEEVRSLLAHLGYRSLNEIIGRADLLTTRADASLTKTQG-LTLNIITQLPDTRSDRTWLDHGDVHSNGPVLDDTLLANAEI 1288
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9323.17383.1 vs.
Match: Ferredoxin-dependent (glutamate synthase n=2 Tax=Crocosphaera watsonii TaxID=263511 RepID=G5J084_CROWT)

HSP 1 Score: 586 bits (1511), Expect = 4.900e-201
Identity = 291/400 (72.75%), Postives = 336/400 (84.00%), Query Frame = 1 
Query:    1 RFCTGGMSLGALSREAHETLAVALNRIGGKSNSGEGGEDPVRFLPIEDVSAESGESTSFPHLKELKNGDLAASAIKQVASGRFGVTPEYL-----IEIKMAQGAKPGEGGQLPGAKISEYIASLRASKPGVTLISPPPHHDIYSIEDLSQLIFDLHQINPDAGVSVKLVSEVGIGTVAAGVAKANADVIQVSGHDGGTGASPLSSIKHAGSPWELGLAEVHRTLLDNKLRDRVLLRTDGGIKTGWDVVIAALMGAEEFGFGTIAMIAEGCIMARICHTNNCPVGVTTQKEKLRKRFPGTPQNVVTFFEACILARYRKFVAEEVRLLLAELGFKSLDEAIGRADVLSARTDAPLAKTNAALDLDFITNLPDVSQDRSWLQHGKPHGNGPVLDDEILADADV 1185
            RFCTGGMSLGALSREAHETLA+A+NR+GGKSNSGEGGEDP RF  + DV +E G S +FPHL  L+NGD  +SAIKQ+ASGRFGVTPEYL     +EIKMAQGAKPGEGGQLPG K+S YIA LR SK GVTLISPPPHHDIYSIEDL+QLIFDLHQINP A VSVKLV+E+GIGT+AAGVAKANAD+IQ+SGHDGGTGASPLSSIKHAG PWELG+ EVHR L++NKLRDRV+LR DGG+KTGWDV++AALMGAE++GFG+IAMIAEGCIMARICHTN CPVGV TQ E+LR+RF G P+NVV FF          F+AEEVR +LA+LG++SLDE +GR D+L  R++  L KT + L+LD + NLPDV  DRSWL H   H NGPVLDD++LADA +
Sbjct:  237 RFCTGGMSLGALSREAHETLAIAMNRLGGKSNSGEGGEDPTRFNVLSDVDSE-GHSPTFPHLNGLRNGDSVSSAIKQIASGRFGVTPEYLMNGKQLEIKMAQGAKPGEGGQLPGKKVSPYIAMLRRSKAGVTLISPPPHHDIYSIEDLAQLIFDLHQINPSAKVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGCPWELGVTEVHRMLMENKLRDRVILRADGGLKTGWDVIMAALMGAEQYGFGSIAMIAEGCIMARICHTNQCPVGVATQMERLRERFTGIPENVVNFFY---------FIAEEVRSILAKLGYRSLDEVVGRTDLLKMRSEVNLTKTQS-LNLDCLLNLPDVKSDRSWLNHQDVHSNGPVLDDQLLADAAI 625
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9323.17383.1 vs.
Match: Ferredoxin-dependent (glutamate synthase n=5 Tax=Oscillatoriophycideae TaxID=1301283 RepID=B1WTI6_CROS5)

HSP 1 Score: 605 bits (1559), Expect = 9.570e-201
Identity = 303/400 (75.75%), Postives = 342/400 (85.50%), Query Frame = 1 
Query:    1 RFCTGGMSLGALSREAHETLAVALNRIGGKSNSGEGGEDPVRFLPIEDVSAESGESTSFPHLKELKNGDLAASAIKQVASGRFGVTPEYL-----IEIKMAQGAKPGEGGQLPGAKISEYIASLRASKPGVTLISPPPHHDIYSIEDLSQLIFDLHQINPDAGVSVKLVSEVGIGTVAAGVAKANADVIQVSGHDGGTGASPLSSIKHAGSPWELGLAEVHRTLLDNKLRDRVLLRTDGGIKTGWDVVIAALMGAEEFGFGTIAMIAEGCIMARICHTNNCPVGVTTQKEKLRKRFPGTPQNVVTFFEACILARYRKFVAEEVRLLLAELGFKSLDEAIGRADVLSARTDAPLAKTNAALDLDFITNLPDVSQDRSWLQHGKPHGNGPVLDDEILADADV 1185
            RFCTGGMSLGALSREAHETLA+A+NR+GGKSNSGEGGEDP RF+ + DV  ESG S +FPHL  L+NGD A+SAIKQVASGRFGVTPEYL     IEIKMAQGAKPGEGGQLPG K+S YIA LR SKPGVTLISPPPHHDIYSIEDL+QLIFDLHQINP A VSVKLV+E+GIGT+AAGVAKANAD+IQ+SGHDGGTGASPLSSIKHAG PWELG+ EVHR L++NKLRDRV+LR DGG+KTGWDV++AALMGAEE+GFG+IAMIAEGCIMARICHTNNCPVGV TQ+EKLRKRF G P+NVV FF          F+AEEVR +LA+LG++SLDE IGR+D+L  R +A L KT + ++LD + NLPDV  DRSWL H   H NGPVLDDE+LADA V
Sbjct:  908 RFCTGGMSLGALSREAHETLAIAMNRLGGKSNSGEGGEDPTRFITLSDVD-ESGNSATFPHLNGLRNGDTASSAIKQVASGRFGVTPEYLMNGQQIEIKMAQGAKPGEGGQLPGKKVSPYIAMLRRSKPGVTLISPPPHHDIYSIEDLAQLIFDLHQINPSAKVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGCPWELGVTEVHRMLMENKLRDRVILRADGGLKTGWDVMMAALMGAEEYGFGSIAMIAEGCIMARICHTNNCPVGVATQQEKLRKRFTGVPENVVNFFY---------FIAEEVRSILAKLGYRSLDEVIGRSDLLKMRKNANLTKTQS-INLDCLLNLPDVKSDRSWLNHEDVHSNGPVLDDELLADAAV 1296
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9323.17383.1 vs.
Match: Glutamate (synthase large subunit (Fragment) n=1 Tax=Leptolyngbya sp. DLM2.Bin27 TaxID=2480213 RepID=A0A5Q4DZR5_9CYAN)

HSP 1 Score: 588 bits (1517), Expect = 3.550e-200
Identity = 302/400 (75.50%), Postives = 334/400 (83.50%), Query Frame = 1 
Query:    1 RFCTGGMSLGALSREAHETLAVALNRIGGKSNSGEGGEDPVRFLPIEDVSAESGESTSFPHLKELKNGDLAASAIKQVASGRFGVTPEYL-----IEIKMAQGAKPGEGGQLPGAKISEYIASLRASKPGVTLISPPPHHDIYSIEDLSQLIFDLHQINPDAGVSVKLVSEVGIGTVAAGVAKANADVIQVSGHDGGTGASPLSSIKHAGSPWELGLAEVHRTLLDNKLRDRVLLRTDGGIKTGWDVVIAALMGAEEFGFGTIAMIAEGCIMARICHTNNCPVGVTTQKEKLRKRFPGTPQNVVTFFEACILARYRKFVAEEVRLLLAELGFKSLDEAIGRADVLSARTDAPLAKTNAALDLDFITNLPDVSQDRSWLQHGKPHGNGPVLDDEILADADV 1185
            RFCTGGMSLGALSREAHE LAVA+NRIGGKSNSGEGGEDP RF  + DV AE G S +FPHL+ LKNGD A+SAIKQVASGRFGVTPEYL     IEIK+AQGAKPGEGGQLPG K+S YIA LR SKP V LISPPPHHDIYSIEDL+QLIFDLHQINP AGVSVKLVSEVGIGT+AAGVAKANADVIQVSGHDGGTGASPLSSIKHAG PWELGL EVH+ L++N+LRDRV LR DGG+KTGWDVV+ ALMGAEEFGFG+IAMIAEGCIMAR+CHTNNCPVGV TQKE+LR+RF G P+NVV FF          ++AEEVR LLA LG+ SL + +GRAD+L  R    LAKTN  LDL  + +LPD   DRSWLQH   H NGPVLDD++LADA++
Sbjct:  376 RFCTGGMSLGALSREAHEVLAVAMNRIGGKSNSGEGGEDPTRFKVLADVDAE-GNSPTFPHLRGLKNGDTASSAIKQVASGRFGVTPEYLMHADQIEIKLAQGAKPGEGGQLPGKKVSPYIAMLRRSKPWVALISPPPHHDIYSIEDLAQLIFDLHQINPRAGVSVKLVSEVGIGTIAAGVAKANADVIQVSGHDGGTGASPLSSIKHAGVPWELGLTEVHKVLMENELRDRVTLRVDGGLKTGWDVVMGALMGAEEFGFGSIAMIAEGCIMARVCHTNNCPVGVATQKEELRQRFTGVPENVVNFFY---------YIAEEVRSLLARLGYTSLIDIVGRADLLKPRAGVTLAKTNN-LDLTTLMDLPDGRGDRSWLQHEAVHSNGPVLDDDMLADAEI 764
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9323.17383.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Glutamate7.560e-25194.75synthase (Ferredoxin-dependent) n=1 Tax=Ectocarpus... [more]
Glutamate8.580e-20675.25synthase subunit alpha (Fragment) n=1 Tax=filament... [more]
glutamate1.160e-20378.00synthase large subunit n=1 Tax=Leptothoe kymatousa... [more]
Glutamate2.020e-20274.75synthase subunit alpha (Fragment) n=1 Tax=Leptolyn... [more]
Glutamate2.600e-20277.86synthase n=1 Tax=Tribonema minus TaxID=303371 RepI... [more]
Glutamate1.770e-20174.25synthase subunit alpha n=1 Tax=Leptolyngbyaceae cy... [more]
Glutamate3.760e-20176.75synthase large subunit n=5 Tax=Leptolyngbyaceae Ta... [more]
Ferredoxin-dependent4.900e-20172.75glutamate synthase n=2 Tax=Crocosphaera watsonii T... [more]
Ferredoxin-dependent9.570e-20175.75glutamate synthase n=5 Tax=Oscillatoriophycideae T... [more]
Glutamate3.550e-20075.50synthase large subunit (Fragment) n=1 Tax=Leptolyn... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9323contigE_fasciculatus_S2_contig9323:481..5738 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score723.4
Seed ortholog evalue5.7e-206
Seed eggNOG ortholog2880.D8LB71
Preferred nameGLU
Model size1185
KEGG rclassRC00006,RC00010,RC02799
KEGG koko:K00264,ko:K00284
KEGG ReactionR00021,R00093,R00114,R00248,R10086
KEGG Pathwayko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009314,GO:0009416,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009743,GO:0009744,GO:0009853,GO:0009941,GO:0009987,GO:0010033,GO:0015930,GO:0016020,GO:0016041,GO:0016053,GO:0016491,GO:0016638,GO:0016643,GO:0019222,GO:0019676,GO:0019740,GO:0019752,GO:0019899,GO:0031323,GO:0031967,GO:0031974,GO:0031975,GO:0034285,GO:0042221,GO:0043085,GO:0043094,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043648,GO:0043650,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0048046,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051338,GO:0051347,GO:0055114,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0080114,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901700
Exons8
EggNOG free text desc.L-glutamate biosynthetic process
EggNOG OGsCOG0069@1,KOG0399@2759
EC1.4.1.13,1.4.1.14,1.4.7.1
Cds size1167
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9323.17383.1prot_E_fasciculatus_S2_contig9323.17383.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9323 481..5720 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842582.544381-CDS-E_fasciculatus_S2_contig9323:480..5561696842582.544381-CDS-E_fasciculatus_S2_contig9323:480..556Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9323 481..556 -
1696842582.5613034-CDS-E_fasciculatus_S2_contig9323:1057..12301696842582.5613034-CDS-E_fasciculatus_S2_contig9323:1057..1230Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9323 1058..1230 -
1696842582.572693-CDS-E_fasciculatus_S2_contig9323:2054..22291696842582.572693-CDS-E_fasciculatus_S2_contig9323:2054..2229Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9323 2055..2229 -
1696842582.583613-CDS-E_fasciculatus_S2_contig9323:2768..28991696842582.583613-CDS-E_fasciculatus_S2_contig9323:2768..2899Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9323 2769..2899 -
1696842582.5931783-CDS-E_fasciculatus_S2_contig9323:3257..33981696842582.5931783-CDS-E_fasciculatus_S2_contig9323:3257..3398Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9323 3258..3398 -
1696842582.6046956-CDS-E_fasciculatus_S2_contig9323:3767..39861696842582.6046956-CDS-E_fasciculatus_S2_contig9323:3767..3986Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9323 3768..3986 -
1696842582.6143072-CDS-E_fasciculatus_S2_contig9323:4600..47651696842582.6143072-CDS-E_fasciculatus_S2_contig9323:4600..4765Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9323 4601..4765 -
1696842582.6262321-CDS-E_fasciculatus_S2_contig9323:5633..57201696842582.6262321-CDS-E_fasciculatus_S2_contig9323:5633..5720Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9323 5634..5720 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842582.6419046-UTR-E_fasciculatus_S2_contig9323:5720..57381696842582.6419046-UTR-E_fasciculatus_S2_contig9323:5720..5738Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9323 5721..5738 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9323.17383.1

>prot_E_fasciculatus_S2_contig9323.17383.1 ID=prot_E_fasciculatus_S2_contig9323.17383.1|Name=mRNA_E_fasciculatus_S2_contig9323.17383.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=389bp
MSLGALSREAHETLAVALNRIGGKSNSGEGGEDPVRFLPIEDVSAESGES
TSFPHLKELKNGDLAASAIKQVASGRFGVTPEYLIEIKMAQGAKPGEGGQ
LPGAKISEYIASLRASKPGVTLISPPPHHDIYSIEDLSQLIFDLHQINPD
AGVSVKLVSEVGIGTVAAGVAKANADVIQVSGHDGGTGASPLSSIKHAGS
PWELGLAEVHRTLLDNKLRDRVLLRTDGGIKTGWDVVIAALMGAEEFGFG
TIAMIAEGCIMARICHTNNCPVGVTTQKEKLRKRFPGTPQNVVTFFEACI
LARYRKFVAEEVRLLLAELGFKSLDEAIGRADVLSARTDAPLAKTNAALD
LDFITNLPDVSQDRSWLQHGKPHGNGPVLDDEILADADV
back to top

mRNA from alignment at E_fasciculatus_S2_contig9323:481..5738-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9323.17383.1 ID=mRNA_E_fasciculatus_S2_contig9323.17383.1|Name=mRNA_E_fasciculatus_S2_contig9323.17383.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5258bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9323:481..5738- (Ectocarpus fasciculatus EfasUO2)
AGGTTCTGCACCGGCGGCATGTCCCTCGGTGCTTTGTCGCGGGAGGCTCA
CGAGACGCTAGCGGTCGCGCTCAACCGCATCGGGGGCAAGTCGAACTCGG
GCGAGGTAAGAAAAAATGCCGGCTTGTATTTTTTTCCTCGCGTGTTTCGT
TTCATACTTGTGCATGTTTGATAAGGAATAGTTAGGCATCGACCGCGTTA
ACCGGTGGGCCTATGAAATGACGCCGTCAGGGTCGGTGTTTGTATTTTTT
TTCATGGGGTGTGCGCATGATGGGTTTATGTGATGAGCAGCAGGATTGTA
TCTTCTGTGCATTTGATGCTCGTTCTCACGCGGTCTGTTTTGGTGACCAG
GATCTCTACATGTAGCGGCCCCCGTTTTTTTATTTTTTTTCAAATTTTCT
TCGTGTTTTGGCCGGGCCTTCCGGTTGGGTTTTATTGTACTGACAACAGC
TCTTGGCTGNNNNNNNNNNCTCCCGCCGAGATTTGAACCCGTGACCTGGT
CGCTAGAAGGTTACGTGGATACCAACTAGACCACCGGGGTGACCGGCCTC
CCCCGTTTTTCTTTTTCTTTTTCAAATTTTCTTCGTGTTTTGGCCGGGCC
TTCCGGTTGGGTTTTATTGTACTGACAACAGCTCTTGGCTAAGCAGAAAT
CGGAACGGTACATATGAATGTGAAGATCAACCCCAACAGCAACAGCCACA
ACCAAATAACAAAAACAACAACACCCATGAGGAGGTTACACCGTGCCTGT
TGGTCCCGCCCCCCCCGTGACAAGGCACTGCTGTGCAGTAACCGAAACGG
TTTCTAATGTGAAGACGACAACAACAACAATGATTTGTATGTGACGATAA
CGACAGCAACAACGACAATCGATTTCGTAATGTGGAGACAACAACAACCA
CGATATTGATACGTACGCACTACTGTGTCTGTAGTCTGTAACCCCGCCCC
CCGTTTTTCTCTACAAAAACAAGGGCGGAGAGGACCCAGTCCGGTTTCTT
CCCATCGAGGATGTCTCGGCAGAGAGCGGCGAGTCCACGTCCTTCCCTCA
CCTCAAGGAGCTTAAGAACGGCGACCTGGCGGCGTCTGCAATCAAGCAAG
TCGCGTCGGGAAGGTTCGGGGTCACGCCGGAGTACCTGGTCTCCGCCAAG
CAGGCAAGGGGGCCAAACATGGGGGGGGGGTGCTCATGCTTTGCATGCTT
TGCATGCTTGCGGTTAGACGATTGATCACGTGTCCTCGAGAGATGCTCCG
ACTGGACCGATTGCCGATGGCCAATCGTTGCTTCCTACTTTGCCACTGGT
GGCTCAGTTTTTTTTGCATATATTGCCATATTCACTTCTCGCCTGTTCAG
AGAGGGAAGGTGTTTGAGTGCTGGGTCTTGATGTTCGTTTGGCGCCGTGC
GTTGCATGGCACATAACACGCGTGGTAGTATCTTCGCAGTGGCCGAACGC
AAAGAACCCCACCAGCCCTCAGCGTAGGCACCCACTGGAGAAATATACAA
GCACGTACGTACGAAATTGCCAAGGTTAAGGTTCCCGCCCCCCCCCCCCC
CCCCCACCACCGAACAATCGACACCCCCCCCCCCCCCCCCCCCCCGCCAC
AACCCACCCCCCCTCTAGAAACACCACCCCAATTATAGACAAANNNNNNN
NNNTTCCCCCCTCCCGCCCCCCCCCTCGTCCCGCCCACTGCAGGCCCCCC
CCCCCCCTCGCACCACCGCGTAACACGCCTTCCTTCGTAACAACGCAACC
AGATTGAGATCAAGATGGCACAAGGCGCCAAGCCGGGAGAGGGGGGGCAG
CTCCCGGGGGCCAAGATCTCCGAGTACATCGCGTCCCTGAGGGCCTCGAA
ACCCGGGGTCACTCTCATCTCGCCCCCGCCCCACCACGACATCTACTCCA
TCGAGGACCTGTCCCAGCTCATCTTCGACCTCCACCAGATCAACCCTGAT
GCCGGGGTTAGCGTAAAGCTGGTGAGAACGAGGAAGACGAGAAGGGGGGT
AGGAGGATGTGAGGGGGAGGGGGGGGGTAGGGGCACATGTGTAGATGGGT
AGACGAAAGCCAAGCTCCGGCTTGGTCTCCGGCCGGCTGGGATGTCTGGT
TTTTGTGTCTCCACAATAATGTGCGTGCAACACCTTGTACGGCCTTTGGG
TATTTCTCGGAGCGTTGTTTTTCTACACAGCAGGCGTGCACTCCGGCCAT
GCTGCTGTGTCGTATCTACGCTTCCTTTCCTTGCCTTTGTCTTGGAAATA
GTCCCACTATTATAGAAGTAGCTCCCACCTACTACACACATGAGTGTGCA
TGCAACAACACCCGACCGGGTTACGTGGGTCCCCGCGCAGGTGTCCGAGG
TGGGAATCGGGACGGTGGCGGCGGGAGTCGCCAAGGCCAACGCGGACGTG
ATCCAGGTGTCCGGGCACGACGGCGGCACGGGGGCGTCTCCTCTGTCCTC
GATCAAGCACGCCGGTTCGCCGTGGGAGCTGGTGCGTGCGCGTGTGTACG
TTACGTGAATTCCACTCCCCCCTCTGTCAAGTATTTTTTTTTTTTTGTCT
TTTTGGGTCGTCCCATTTGTTCTAGACGTCGGCCTTTTGCACATTCCGGT
ACTATTTCTGGACGCACCAGGGAGTTCAGTATGCTCCGGGGTATATATAT
AGTTTCCGGTTATTTGTACGTTTTTTGGTGTTTTTTGGTGGTGCGTGCCC
TCTTCTCCAAAGAGTCAAAACTTTTTTCCTTCTATGCAGAGGTTTAGCAT
GTACCATCACCGTGTGACCTCTGTTGATATATTTCCTGTCTAGTTAATCT
GCGGTTTTACACATACCACACTACACGCCGAAACAACAGGGTCTCGCCGA
GGTCCACCGCACTCTGCTAGACAACAAGCTTCGGGACAGGGTACTGCTCC
GCACGGACGGCGGCATCAAGACCGGCTGGGACGTGGTCATCGCCGCTCTC
ATGGGGGCAGAGGAGTTCGGGTGAGAAAGTACCCGAGCAATCAGTAAGCT
GCACATGGCACGGACAAGCTCACTGCTGTTGTTGGGACAAAAGAAATGTC
TGTTGACAAGTTCAGCAGGAGAGCAAAGAGAGGTGGTCTTGCACCGGCTT
CAGGGTCGTACCATATAAAGTACTTGCTTTGTTCGGGAGGAACTGGAAAG
AGGTTACCGTGGGTTTTCAGTGTGCCAATGTGAAGATAAAAGCAGCAACA
AGCGGAAGAGCTAAGAGTAACGAGGTTAGCCGGGTTGCACGCGTCATTTA
GTGCAATAGGTATCTACCTTTTTTGTTCCAAGGTTTCGGCGTGGTGCGGT
GTGCAAGCCTCGATTCCTCGCCTTTCGTCTAGACGCTTTAGACTAGCATT
CCAACGCGCCCAAGCGTTCAAGCTCTCTCCGTCTCTCTTTCACAACGACT
CTCTCCGGACAGATGCAGTCCGCTGACCAAGCATCCCCCCGCCCTCCCGC
CCGCCGCCTTCTTTGGTTATGTCTTTTTCTTCTCTTCTGCGGGATAATCA
AATCCCAAGGTTCGGAACGATCGCCATGATCGCGGAGGGCTGCATCATGG
CGCGCATCTGCCACACGAACAACTGCCCCGTCGGCGTCACCACCCAGAAG
GAGAAGCTCCGCAAGAGATTCCCCGGAACCCCCCAGAACGTGGTCACCTT
CTTCGAGGCATGTATCTTAGCACGCTACCGTAAGGTTGCGAGTCAGCGCA
CAGGGGGTGCGACCGATTTTCAAAAGCGTAATTTCTCCACAAGCAGGATG
TTACTTTACCACTGTCGAATATGGCGGTTTTGGAAATATCTCATCGAGAG
CTTTCCTGAGAATTATCAGTTGGCGCTCGCAGCCTCCTGTTTTTGGAGAA
ATTACGCTCTGAAAATCGATCGCACCCCTGTGCGCTGACTCGTAACCGGA
CGGTATTGGGGTTGCAGTTTTTTCGTGCCAAGTTGTGCTACAATATGGCA
GCTTCCAAATGGTTGGAGATAGTGTGATGTGGTCGCCCGAGGGGACACGA
GAGGGCCAAGCGCCGTACACGAGGCTCCCCGCCACACGACGGCGCCGCAG
AATTACAACACCGACGTTTTCATGACGTGCGGCTATGTTGACGATGGGTG
AAATACGTCCGTTGGGGGATAGAAGGAATAGAAGGAATAGCAGGGAGAGA
GAGATCACTTTCAAGCTGCCTGGTCCTGTGTTCGAGGTGCCCAATACTTT
TAATATGGGGTGTGTTTTATTATATTACTTACTTTTGTTTTAGTTTTTTT
AGTTTTTGGTTTTGGGGAGGGATAGTTTTGGTTTTTTGGTTTTGGGGAGG
GAATATAGAATCCGAACATTTGTGTTCCCCCCCCCGTCTCTGCCTTGCGA
GGTCTAACGACTAATACGGCCCGCACGGTTATGACTACACTCCCCCTGCC
TTTGTCTTGTCGCGGGCATCAACTTGTTTGACCCTCCGTTCAACTTGCTA
ACCCTCCGTTCTCCCCGTTTTGTTGCTTGTTTGCTTCTGTGTCGATTGGT
CTATTTAGTTTGTGGCCGAGGAGGTTAGGCTGTTGTTGGCAGAGCTCGGC
TTCAAGTCTCTGGACGAGGCGATAGGGAGGGCGGACGTGCTGTCGGCCAG
GACCGACGCGCCCCTCGCCAAGACGAACGCCGCCCTCGACCTGGACTTCA
TCACAAACCTTCCAGACGTTTCGCAGGACAGGTGCGGCTCGCTTTTGTTT
GTTGTTGTTGTTGTTGTGATGGTCGGTGTTGTTGTGATGGCTGTGTTTGT
TGTGTTTTCTGCTGCTTGTTCGCTCTTGTGGTCTGGTTTAACCGTTGTTG
TTTCTGGTACTACGGTTGTGTTTTTGATGTTGTTGTCGTGGGTGAAATTG
TCTATGCTGGCGGTGTTTGTATGCGGCTCGTTTTTTTGTTGTAGTTGGGA
TGGTCCATGTTGGCAGTGTTTGTGTGCGTGTCGGTGTTCTGGTACTCGGT
TGCGTGTTGGTGTTGTTATCGTGGTTGAGATTGCCTGTTGGCGTCGTCTG
TACGTGGAATTTGATCGCTGTTTTGCTCTTCAAGTCTGGTTTAACACCGC
CCTCCTCCCCAAAAGGCACCTGACCGCCATCCCCACACCGCGAGTCGTAC
GCGAACCTCAAGACCGTCTTCCGCACGCCCGTCCGTCCGTCCGTCCGTCC
GTCCGTGTCTTGCGCACCCTTTTTTTTTTTAGGTCCTGGTTGCAGCACGG
CAAGCCGCACGGCAACGGTCCGGTACTTGACGACGAAATCCTCGCCGATG
CCGATGTC
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9323:481..5738-

>mRNA_E_fasciculatus_S2_contig9323.17383.1 ID=mRNA_E_fasciculatus_S2_contig9323.17383.1|Name=mRNA_E_fasciculatus_S2_contig9323.17383.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1167bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9323:481..5738- (Ectocarpus fasciculatus EfasUO2)
ATGTCCCTCGGTGCTTTGTCGCGGGAGGCTCACGAGACGCTAGCGGTCGC
GCTCAACCGCATCGGGGGCAAGTCGAACTCGGGCGAGGGCGGAGAGGACC
CAGTCCGGTTTCTTCCCATCGAGGATGTCTCGGCAGAGAGCGGCGAGTCC
ACGTCCTTCCCTCACCTCAAGGAGCTTAAGAACGGCGACCTGGCGGCGTC
TGCAATCAAGCAAGTCGCGTCGGGAAGGTTCGGGGTCACGCCGGAGTACC
TGATTGAGATCAAGATGGCACAAGGCGCCAAGCCGGGAGAGGGGGGGCAG
CTCCCGGGGGCCAAGATCTCCGAGTACATCGCGTCCCTGAGGGCCTCGAA
ACCCGGGGTCACTCTCATCTCGCCCCCGCCCCACCACGACATCTACTCCA
TCGAGGACCTGTCCCAGCTCATCTTCGACCTCCACCAGATCAACCCTGAT
GCCGGGGTTAGCGTAAAGCTGGTGTCCGAGGTGGGAATCGGGACGGTGGC
GGCGGGAGTCGCCAAGGCCAACGCGGACGTGATCCAGGTGTCCGGGCACG
ACGGCGGCACGGGGGCGTCTCCTCTGTCCTCGATCAAGCACGCCGGTTCG
CCGTGGGAGCTGGGTCTCGCCGAGGTCCACCGCACTCTGCTAGACAACAA
GCTTCGGGACAGGGTACTGCTCCGCACGGACGGCGGCATCAAGACCGGCT
GGGACGTGGTCATCGCCGCTCTCATGGGGGCAGAGGAGTTCGGGTTCGGA
ACGATCGCCATGATCGCGGAGGGCTGCATCATGGCGCGCATCTGCCACAC
GAACAACTGCCCCGTCGGCGTCACCACCCAGAAGGAGAAGCTCCGCAAGA
GATTCCCCGGAACCCCCCAGAACGTGGTCACCTTCTTCGAGGCATGTATC
TTAGCACGCTACCGTAAGTTTGTGGCCGAGGAGGTTAGGCTGTTGTTGGC
AGAGCTCGGCTTCAAGTCTCTGGACGAGGCGATAGGGAGGGCGGACGTGC
TGTCGGCCAGGACCGACGCGCCCCTCGCCAAGACGAACGCCGCCCTCGAC
CTGGACTTCATCACAAACCTTCCAGACGTTTCGCAGGACAGGTCCTGGTT
GCAGCACGGCAAGCCGCACGGCAACGGTCCGGTACTTGACGACGAAATCC
TCGCCGATGCCGATGTC
back to top