prot_E_fasciculatus_S2_contig93.17352.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig93.17352.1
Unique Nameprot_E_fasciculatus_S2_contig93.17352.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length257
Homology
BLAST of mRNA_E_fasciculatus_S2_contig93.17352.1 vs. uniprot
Match: D8LR37_ECTSI (Pseudouridylate synthases, 23S RNA-specific n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR37_ECTSI)

HSP 1 Score: 497 bits (1280), Expect = 1.250e-177
Identity = 246/256 (96.09%), Postives = 250/256 (97.66%), Query Frame = 0
Query:    1 MASTGKARPGTSASLGAAAVGEAGGKGKGVAPEEMWLNGPFNAPVPPGPLEVLFVDDEIVVCNKPSDLLCVPGRIEKDSLATRAALELGHYRVDRMIVHRLDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVAMVHGVLSADEGEVDLPLCRNRGCPPLHMVNFEHGKPSLTKWRVLDRAADRTRVELIPVSGRSHQLRLHMNAIGHPILGDHFYGTKDSLALADRCLLHAHTLCLRHPKTGERTMFTAPCEF 256
            MASTG+ RPGTSASLGAA VGEAGGKGKGVA EEMWLNGPFNAPVPPGPLE+LFVD+EIVVCNKPSDLLCVPGRIEKDSLATRAALELGHYRVDRMIVHRLDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVA+VHGVL ADEGEVDLPLCRNRGCPPLHMVNFEHGKPSLTKWRVLDRAADRTRVELIPVSGRSHQLRLHMNAIGHPILGDHFYGT DSLALA RCLLHAHTLCLRHPKTGERTMFTAPCEF
Sbjct:    1 MASTGQVRPGTSASLGAAVVGEAGGKGKGVAAEEMWLNGPFNAPVPPGPLEILFVDEEIVVCNKPSDLLCVPGRIEKDSLATRAALELGHYRVDRMIVHRLDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVAIVHGVLWADEGEVDLPLCRNRGCPPLHMVNFEHGKPSLTKWRVLDRAADRTRVELIPVSGRSHQLRLHMNAIGHPILGDHFYGTTDSLALAGRCLLHAHTLCLRHPKTGERTMFTAPCEF 256          
BLAST of mRNA_E_fasciculatus_S2_contig93.17352.1 vs. uniprot
Match: A0A6H5KN60_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN60_9PHAE)

HSP 1 Score: 498 bits (1282), Expect = 9.160e-177
Identity = 246/256 (96.09%), Postives = 250/256 (97.66%), Query Frame = 0
Query:    1 MASTGKARPGTSASLGAAAVGEAGGKGKGVAPEEMWLNGPFNAPVPPGPLEVLFVDDEIVVCNKPSDLLCVPGRIEKDSLATRAALELGHYRVDRMIVHRLDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVAMVHGVLSADEGEVDLPLCRNRGCPPLHMVNFEHGKPSLTKWRVLDRAADRTRVELIPVSGRSHQLRLHMNAIGHPILGDHFYGTKDSLALADRCLLHAHTLCLRHPKTGERTMFTAPCEF 256
            MASTGK RPGTSASLGAA VGE GGKGKGVA EEMWLNGPFNAPVPPGPL++LFVD+EIVVCNKPSDLLCVPGRIEKDSLATRAALELGHYRVDRMIVHRLDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVAMVHGVL ADEGEVDLPLCRNRGCPPLHMVNFEHGKPSLTKWRVL+RAADRTRVELIPVSGRSHQLRLHMNAIGHPILGDHFYGTKDSL LADRCLLHAHTLCLRHPKTGERTMFTAPCEF
Sbjct:   75 MASTGKIRPGTSASLGAAVVGEPGGKGKGVAAEEMWLNGPFNAPVPPGPLDILFVDEEIVVCNKPSDLLCVPGRIEKDSLATRAALELGHYRVDRMIVHRLDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVAMVHGVLWADEGEVDLPLCRNRGCPPLHMVNFEHGKPSLTKWRVLERAADRTRVELIPVSGRSHQLRLHMNAIGHPILGDHFYGTKDSLDLADRCLLHAHTLCLRHPKTGERTMFTAPCEF 330          
BLAST of mRNA_E_fasciculatus_S2_contig93.17352.1 vs. uniprot
Match: A0A836CD05_9STRA (Pseudouridylate synthase, 23S RNA-specific n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD05_9STRA)

HSP 1 Score: 226 bits (575), Expect = 8.010e-71
Identity = 119/232 (51.29%), Postives = 150/232 (64.66%), Query Frame = 0
Query:   30 VAPEEMWLNGPFNAPVPPGPLEVLFVDDEIVVCNKPSDLLCVPGRIEKDSLATRAALELGHYRVDRMIVHRLDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVAMVHGVLSADEGEVDLPLCRNRGCPPLHMVNFEHGKPSLTKWRVLDR-----AADRTRVELIPVSGRSHQLRLHMNAIGHPILGDHFYGTKDSLALADRCLLHAHTLCLRHPKTGERTMFTAPCEF 256
            ++PEE W+          GP++V++ DD I+VCNKPS LL VPG   KD L +R A++ G  R+D+M+VHRLD ATSG V+ ARTD AL+ L+  FR R+V K Y A+V+G ++ D GEV  P+ ++   PPL +++   GKP  T W VL R      AD TRV L PV+GRSHQLRLHM  +GHPILGD  Y    + ALA RCLLHA TL  RHP TGE   F  P EF
Sbjct:    3 LSPEERWMR-------VAGPVDVVYSDDHIIVCNKPSGLLSVPGITLKDCLVSRVAVKFGQARIDKMVVHRLDQATSGLVLFARTDEALRALHEDFRLRRVSKCYEAVVYGSVAGDSGEVTEPMRKDMDNPPLQLIDHVQGKPCQTLWSVLSRETRGGGADATRVALTPVTGRSHQLRLHMQVLGHPILGDDLYAHAAARALAPRCLLHARTLRFRHPATGEDLSFEVPPEF 227          
BLAST of mRNA_E_fasciculatus_S2_contig93.17352.1 vs. uniprot
Match: A0A369WRJ6_9GAMM (Pseudouridine synthase n=1 Tax=Motiliproteus coralliicola TaxID=2283196 RepID=A0A369WRJ6_9GAMM)

HSP 1 Score: 207 bits (526), Expect = 1.060e-63
Identity = 110/209 (52.63%), Postives = 145/209 (69.38%), Query Frame = 0
Query:   50 LEVLFVDDEIVVCNKPSDLLCVPGR--IEKDSLATRAALELGHYRVDRMIVHRLDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVAMVHGVLSADEGEVDLPLCRNRGCPPLHMVNFEHGKPSLTKWRVLDRAADRTRVELIPVSGRSHQLRLHMNAIGHPILGDHFYGTKDSLALADRCLLHAHTLCLRHPKTGERTMFTAPCEF 256
            +EVL+ DD +V+  KP+DLL VPGR    +D L  R   E    R    IVHRLD ATSG +++A    + ++L+RQF +R+ RKRY+A+V G L   +G V+LPL  +    P  MV+ + GKP+LT++R+LD+A DR+RVELIP++GRSHQLR+HM A+GHPILGD FY T  +LA ADR  LHA  L +RHP +GER  FTAPC F
Sbjct:    2 IEVLYQDDSLVIAVKPADLLSVPGRGPENQDCLLHRLQSEFPTAR----IVHRLDCATSGVMVLALDADSHRELSRQFHDRETRKRYIAVVDGTLKQHQGRVELPLRCDWPNRPKQMVDHDQGKPALTEYRLLDQADDRSRVELIPITGRSHQLRVHMQALGHPILGDRFYATPSALAKADRLNLHAEQLGIRHPVSGERMEFTAPCPF 206          
BLAST of mRNA_E_fasciculatus_S2_contig93.17352.1 vs. uniprot
Match: A0A291HLR0_9GAMM (Pseudouridine synthase n=4 Tax=Zobellella denitrificans TaxID=347534 RepID=A0A291HLR0_9GAMM)

HSP 1 Score: 206 bits (524), Expect = 3.660e-63
Identity = 111/218 (50.92%), Postives = 146/218 (66.97%), Query Frame = 0
Query:   41 FNAPVPPGPLEVLFVDDEIVVCNKPSDLLCVPGR--IEKDSLATRAALELGHYRVDRMIVHRLDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVAMVHGVLSADEGEVDLPLCRNRGCPPLHMVNFEHGKPSLTKWRVLDRAADRTRVELIPVSGRSHQLRLHMNAIGHPILGDHFYGTKDSLALADRCLLHAHTLCLRHPKTGERTMFTAPCEF 256
            ++ P+ P   EVL+ D+ ++V NKPS LL VPGR  I +DSL+ R A      +V    VHRLDMATSG ++MA    A ++L+RQFRER+  KRY A VHG L  D G +DLPLC +    P HMV+ EHGKP+LT WR L R  DR+ VEL P++GRSHQLR+HM ++GHPILGD+ Y + ++LA+A    LHA  L  RHP++ +   F+AP  F
Sbjct:    6 YDPPMDPQ-FEVLYQDNSLIVLNKPSGLLSVPGRELIHRDSLSYRVARVYPGVQV----VHRLDMATSGVIVMALHPKAHRELSRQFRERETAKRYYAWVHGRLEQDAGSIDLPLCCDWPNRPRHMVSLEHGKPALTHWRCLRREPDRSLVELTPITGRSHQLRVHMLSLGHPILGDNLYASGEALAMAPHLQLHAAWLAFRHPRSKQWLEFSAPAPF 218          
BLAST of mRNA_E_fasciculatus_S2_contig93.17352.1 vs. uniprot
Match: UPI000371F359 (RluA family pseudouridine synthase n=1 Tax=Kordiimonas gwangyangensis TaxID=288022 RepID=UPI000371F359)

HSP 1 Score: 205 bits (521), Expect = 9.470e-63
Identity = 109/210 (51.90%), Postives = 144/210 (68.57%), Query Frame = 0
Query:   49 PLEVLFVDDEIVVCNKPSDLLCVPGRIEK--DSLATRAALELGHYRVDRMIVHRLDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVAMVHGVLSADEGEVDLPLCRNRGCPPLHMVNFEHGKPSLTKWRVLDRAADRTRVELIPVSGRSHQLRLHMNAIGHPILGDHFYGTKDSLALADRCLLHAHTLCLRHPKTGERTMFTAPCEF 256
            PL+++ VDD+I+V NKP+ LL VPGR E+  D LATRA  E    R    IVHRLDM TSG +IMAR   AL+ L RQF +R+  K Y A+++G L+ DEGEVDLPL  +    P H V+FE+GKP+ T+++V++R    TRV L PV+GRSHQLR+HM ++GH I+GD+ Y   ++  LADR  LHA  L + HP++GE   FTAP  F
Sbjct:   15 PLDIIHVDDDILVLNKPNGLLSVPGRTEEKFDCLATRAEAEFTGVR----IVHRLDMETSGVIIMARHMDALRHLGRQFEDRKTDKVYEALIYGNLARDEGEVDLPLLVDWPNRPKHRVDFENGKPAFTRYKVIERTEKTTRVALYPVTGRSHQLRVHMLSLGHAIIGDNLYAEGEAFTLADRLCLHARELTVTHPESGESLTFTAPVPF 220          
BLAST of mRNA_E_fasciculatus_S2_contig93.17352.1 vs. uniprot
Match: A0A371RL31_9PROT (RNA pseudouridine synthase n=1 Tax=Parvularcula marina TaxID=2292771 RepID=A0A371RL31_9PROT)

HSP 1 Score: 202 bits (513), Expect = 1.390e-61
Identity = 102/207 (49.28%), Postives = 136/207 (65.70%), Query Frame = 0
Query:   50 LEVLFVDDEIVVCNKPSDLLCVPGRIEKDSLATRAALELGHYRVDRMIVHRLDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVAMVHGVLSADEGEVDLPLCRNRGCPPLHMVNFEHGKPSLTKWRVLDRAADRTRVELIPVSGRSHQLRLHMNAIGHPILGDHFYGTKDSLALADRCLLHAHTLCLRHPKTGERTMFTAPCEF 256
            L+VL+ DD ++V NK + LL VPG + +DSL TRAA   G+     ++ HRLDMATSG ++M R    L  +  QF +RQ  KRY+A+V G ++ D+G VDLP+  +    PL M+  E G+P++T W VL R  D+TR+ L P++GRSHQLRLHM  +GHPILGD +Y   ++ A + R LLHA  L L HP  GER  FTAPC F
Sbjct:   15 LDVLYGDDALIVLNKQAGLLSVPGNVSRDSLETRAAERFGN----TLVAHRLDMATSGVIVMPRGKENLAAVGLQFEKRQTEKRYIAVVWGDVAEDKGTVDLPIRCDWPNRPLQMICHERGRPAVTHWEVLTREGDKTRLALTPITGRSHQLRLHMKELGHPILGDEWYADGEARAASPRLLLHAEVLTLTHPANGERMSFTAPCPF 217          
BLAST of mRNA_E_fasciculatus_S2_contig93.17352.1 vs. uniprot
Match: A0A233RBH1_9GAMM (Pseudouridine synthase n=4 Tax=Oceanimonas TaxID=129577 RepID=A0A233RBH1_9GAMM)

HSP 1 Score: 201 bits (512), Expect = 2.240e-61
Identity = 108/218 (49.54%), Postives = 141/218 (64.68%), Query Frame = 0
Query:   41 FNAPVPPGPLEVLFVDDEIVVCNKPSDLLCVPGR--IEKDSLATRAALELGHYRVDRMIVHRLDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVAMVHGVLSADEGEVDLPLCRNRGCPPLHMVNFEHGKPSLTKWRVLDRAADRTRVELIPVSGRSHQLRLHMNAIGHPILGDHFYGTKDSLALADRCLLHAHTLCLRHPKTGERTMFTAPCEF 256
            ++ PV P   ++L+ DD ++V NKPS LL VPGR  +  DSL+ R +      +V    VHRLDMATSG ++MA    A ++L+RQFRER+  KRY A VHG  S DEG +DLPLC +    P HMV+ EHGK +LT WR L R   R+ +EL P++GRSHQLR+HM ++GHPILGD+ Y   ++L +A    LHA  L  RHP+   R  FTAP  F
Sbjct:    6 YDPPVDPQ-FDILYQDDSLIVLNKPSGLLSVPGRDPVHFDSLSLRVSRVFPAVQV----VHRLDMATSGVIVMALNPKAHRELSRQFRERETEKRYYAWVHGQPSEDEGSIDLPLCCDWPNRPRHMVSHEHGKKALTHWRCLRREGQRSLMELTPITGRSHQLRVHMLSLGHPILGDNLYAEGEALTMAPHLQLHAAWLAFRHPRYKHRLEFTAPAPF 218          
BLAST of mRNA_E_fasciculatus_S2_contig93.17352.1 vs. uniprot
Match: A0A2P7QL36_9GAMM (Pseudouridine synthase n=1 Tax=Zobellella taiwanensis TaxID=347535 RepID=A0A2P7QL36_9GAMM)

HSP 1 Score: 201 bits (510), Expect = 4.780e-61
Identity = 106/208 (50.96%), Postives = 139/208 (66.83%), Query Frame = 0
Query:   51 EVLFVDDEIVVCNKPSDLLCVPGR--IEKDSLATRAALELGHYRVDRMIVHRLDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVAMVHGVLSADEGEVDLPLCRNRGCPPLHMVNFEHGKPSLTKWRVLDRAADRTRVELIPVSGRSHQLRLHMNAIGHPILGDHFYGTKDSLALADRCLLHAHTLCLRHPKTGERTMFTAPCEF 256
            EVL+ D+ ++V NKPS LL VPGR  + +DSL+ R A        D  +VHRLDMATSG ++MA    A ++L+RQFRER+  KRY A V+G  +AD G VDLPLC +    P HMV+ EHGKP+LT WR L R   R+ +EL P++GRSHQLR+HM ++GHPILGD+ Y + ++L +A +  LHA  L  RHP+      FTAP  F
Sbjct:   15 EVLYQDNSLIVLNKPSGLLSVPGREAVHRDSLSYRVA----RVYPDVQVVHRLDMATSGVIVMALHPKAHRELSRQFRERETEKRYYAWVYGSPAADAGSVDLPLCCDWPNRPRHMVSLEHGKPALTHWRCLRREPGRSLLELTPITGRSHQLRVHMLSLGHPILGDNLYASGEALTMAPQLQLHAAHLAFRHPRYRHWLEFTAPAPF 218          
BLAST of mRNA_E_fasciculatus_S2_contig93.17352.1 vs. uniprot
Match: UPI001AA08F5F (bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA n=1 Tax=Oceanisphaera sp. DM8 TaxID=2818389 RepID=UPI001AA08F5F)

HSP 1 Score: 199 bits (506), Expect = 1.810e-60
Identity = 110/218 (50.46%), Postives = 139/218 (63.76%), Query Frame = 0
Query:   41 FNAPVPPGPLEVLFVDDEIVVCNKPSDLLCVPGR--IEKDSLATRAALELGHYRVDRMIVHRLDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVAMVHGVLSADEGEVDLPLCRNRGCPPLHMVNFEHGKPSLTKWRVLDRAADRTRVELIPVSGRSHQLRLHMNAIGHPILGDHFYGTKDSLALADRCLLHAHTLCLRHPKTGERTMFTAPCEF 256
            +N P+ P   E+L+ DD I+V NKPS LL VPGR  +  DSLA R A           IVHRLDMATSG +++A    A  +L+RQFRER+  KRY A V+G  + D G VD+PLC +    P  MVN+E+GK +LT WR L R ADR+ VEL P++GRSHQLR+HM ++GH ILGD+ Y   ++L +A   LLHA  L   HP T E   FTAP  F
Sbjct:    6 YNPPMDPA-FEILYQDDSIIVLNKPSGLLSVPGRERVHHDSLALRVA----RVYPTAKIVHRLDMATSGVIVIALHAKAHSELSRQFRERETAKRYYAWVYGRPAEDAGSVDVPLCCDWPNRPRQMVNYEYGKAALTHWRCLRRLADRSLVELTPITGRSHQLRVHMKSLGHVILGDNLYAEGEALTMAPHLLLHASELAFYHPDTHEWLTFTAPAPF 218          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig93.17352.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR37_ECTSI1.250e-17796.09Pseudouridylate synthases, 23S RNA-specific n=1 Ta... [more]
A0A6H5KN60_9PHAE9.160e-17796.09PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A836CD05_9STRA8.010e-7151.29Pseudouridylate synthase, 23S RNA-specific n=1 Tax... [more]
A0A369WRJ6_9GAMM1.060e-6352.63Pseudouridine synthase n=1 Tax=Motiliproteus coral... [more]
A0A291HLR0_9GAMM3.660e-6350.92Pseudouridine synthase n=4 Tax=Zobellella denitrif... [more]
UPI000371F3599.470e-6351.90RluA family pseudouridine synthase n=1 Tax=Kordiim... [more]
A0A371RL31_9PROT1.390e-6149.28RNA pseudouridine synthase n=1 Tax=Parvularcula ma... [more]
A0A233RBH1_9GAMM2.240e-6149.54Pseudouridine synthase n=4 Tax=Oceanimonas TaxID=1... [more]
A0A2P7QL36_9GAMM4.780e-6150.96Pseudouridine synthase n=1 Tax=Zobellella taiwanen... [more]
UPI001AA08F5F1.810e-6050.46bifunctional tRNA pseudouridine(32) synthase/23S r... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2350.10coord: 43..256
e-value: 8.4E-64
score: 217.0
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 49..256
NoneNo IPR availablePANTHERPTHR21600:SF43RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Acoord: 49..256
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 59..207
e-value: 2.1E-31
score: 109.1
IPR006224Pseudouridine synthase, RluC/RluD, conserved sitePROSITEPS01129PSI_RLUcoord: 98..112
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 50..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig93contigE_fasciculatus_S2_contig93:35040..37732 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig93.17352.1mRNA_E_fasciculatus_S2_contig93.17352.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig93 34373..37860 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig93.17352.1 ID=prot_E_fasciculatus_S2_contig93.17352.1|Name=mRNA_E_fasciculatus_S2_contig93.17352.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=257bp
MASTGKARPGTSASLGAAAVGEAGGKGKGVAPEEMWLNGPFNAPVPPGPL
EVLFVDDEIVVCNKPSDLLCVPGRIEKDSLATRAALELGHYRVDRMIVHR
LDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVAMVHGVLSADEGEVD
LPLCRNRGCPPLHMVNFEHGKPSLTKWRVLDRAADRTRVELIPVSGRSHQ
LRLHMNAIGHPILGDHFYGTKDSLALADRCLLHAHTLCLRHPKTGERTMF
TAPCEF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom_sf
IPR006224PsdUridine_synth_RluC/D_CS
IPR006145PsdUridine_synth_RsuA/RluA