prot_E_fasciculatus_S2_contig9185.17243.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig9185.17243.1
Unique Name	prot_E_fasciculatus_S2_contig9185.17243.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	98

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig9185.17243.1 vs. uniprot
Match: D8LRP2_ECTSI (Structural maintenance of chromosomes protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP2_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 7.390e-45
Identity = 92/98 (93.88%), Postives = 93/98 (94.90%), Query Frame = 0

Query:    1 MEGGARSSGASGMSLSGVSGTQGSSTAHFSQAQNASVREDREKALEVDLSKLKKHRGAKDAQGLEEVVSGYRKQMQELQGQINQMTPNMRAVERFGDV 98
            MEGGARSSGASGMSL    GTQGSSTAHFSQAQNASV+EDREKALEVDLSKLKKHRGAKDAQGLEEVVSGYRKQMQELQ QINQMTPNMRAVERFGDV
Sbjct: 1004 MEGGARSSGASGMSLXXXXGTQGSSTAHFSQAQNASVKEDREKALEVDLSKLKKHRGAKDAQGLEEVVSGYRKQMQELQAQINQMTPNMRAVERFGDV 1101

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig9185.17243.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig9185.17243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LRP2_ECTSI	7.390e-45	93.88	Structural maintenance of chromosomes protein n=1 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 61..81

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig9185	contig	E_fasciculatus_S2_contig9185:2807..4536 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig9185.17243.1	mRNA_E_fasciculatus_S2_contig9185.17243.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig9185 2807..4536 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig9185.17243.1 ID=prot_E_fasciculatus_S2_contig9185.17243.1|Name=mRNA_E_fasciculatus_S2_contig9185.17243.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=98bp
MEGGARSSGASGMSLSGVSGTQGSSTAHFSQAQNASVREDREKALEVDLS
KLKKHRGAKDAQGLEEVVSGYRKQMQELQGQINQMTPNMRAVERFGDV