mRNA_E_fasciculatus_S2_contig917.17235.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig917.17235.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI) HSP 1 Score: 524 bits (1349), Expect = 4.670e-175 Identity = 278/368 (75.54%), Postives = 301/368 (81.79%), Query Frame = -2
Query: 747 EELCSLIEPVAKLIATCQQTHVPTGQAALLGLAALKLSTLNVDVPLDIPTPARKPTQGGTEGFGGEEGTTARAHNDLTRVGREAREHLASALNWRDFDARYKSTVSDRTDLVFDMQMGLHPCTAGLEYVDRLAPTEGHAAVVKKSVTDKLIALAVELAAKEAER----------------------NAHPTFANAESQKEATTSAIMAGLGLIKTRDEGASASPIERARAELEALRSLDVGALSGDVGCEGVLKWWKRWEHSYPLLARAARVVFAAPASVMVQERDLSAAGRMMTSSRSTGDAKYVEMVLFLHGNLDLIPENIPELPAGGVDGPHTKIPGRLSNPMPELHVLDGAFGPLDLTDGDESE 1784
+EL SLI+PVA++IATCQQTH PTGQAA+LGLAALKLSTLN D PLDI TPA KPTQG TEG GGE+ TTARAH DLTRVGREAREHLASAL+WRDFD RYKSTV+ T LVFDMQMGLHPCTA L+YV RLAPTEGHAAVVKK++TDK+IALA +LA K+AER N +P FA+A KEATT+AIMAGLGLI TRDEG SASPIERARAELE LRS AL GD CEGVL WWKR EHSYPLLAR ARVVFAAPASVMVQERDL +AGRMMTSSRSTGDAKYVEMVLFLHGN+DL+PE IPELPA GV+G TKIPGRLSNPM ELH LDG FGP+DLT+ DESE
Sbjct: 398 DELYSLIQPVAEVIATCQQTHFPTGQAAVLGLAALKLSTLNADAPLDILTPASKPTQGATEGAGGEQRTTARAHKDLTRVGREAREHLASALHWRDFDKRYKSTVAKSTGLVFDMQMGLHPCTADLQYVSRLAPTEGHAAVVKKNITDKIIALAAKLADKKAERKGIEAEQGEPAAKRAPQASAPGNTYPMFASARYHKEATTTAIMAGLGLIATRDEGTSASPIERARAELETLRSASDDALFGDTSCEGVLNWWKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPELPADGVNGVQTKIPGRLSNPMLELHALDGEFGPVDLTNDDESE 765
BLAST of mRNA_E_fasciculatus_S2_contig917.17235.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI) HSP 1 Score: 371 bits (952), Expect = 7.520e-117 Identity = 226/385 (58.70%), Postives = 256/385 (66.49%), Query Frame = -2
Query: 747 EELCSLIEPVAKLIATCQQTHVPTGQAALLGLAALKLSTLNVDVPLDIPTPARKPTQGGTEGFGGEEG---TTARAHNDLTRVGREAREHLASALNWRDFDARYKSTVSDRT-DLVFDMQMGLHPCTAGLEYVDRLAPTEGHAAVVKKSVTDKLIALAVELAAKEAERN-------------AHPT---------FANAESQKEATTSAIMAGLGLIKTRDEGASASPIER----ARAELEALRSLDVGALSGDVGCEGVLKWWKRWEHSYPLLARAARVVFAAPASVMVQERDLSAAGRMMTSSRSTGDAKYVEMVLFLHGNLDLIPENIPELPAGGVDGPHTKIPGRLSNPMPELHVLDGAFGPLDLT---------DGDESE 1784
+EL SLI+PVA+LI TCQQTHVPTGQAA+LGLA LKLST NVD LD+ TP R QG EG GG E + R HN LT+VGR+AREHLASAL+ R FD YKS S++T D VFDMQMGLHP TA L+YVD+L TE HAA VKKS+TDK+IALAVELA KE ER A P A A ++K+ +A A LGL K R G AS ARAELE LR ++ G L+ D+ CEGVL+WWK+W YPLLARAARVVF APAS V ERD + A MM SSRS GDAKYVEMVLFLHGNLDLIPE IPEL V KIPGRLSNP+PELH LDG G +DLT +G+ESE
Sbjct: 290 DELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVR--AQGWPEGTGGGERKATSVPRLHNHLTQVGRDAREHLASALDRRYFDRCYKSADSEKTTDFVFDMQMGLHPTTADLQYVDKLTSTEVHAAFVKKSITDKIIALAVELAEKEMERKQAGPEQDESVAKRARPAAAPGSLQTAVAKARNKKDDAATAKFASLGLFKKRRGGGEASQQPTFEPMARAELETLRGVEAGTLTDDLSCEGVLEWWKKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDVQA---KIPGRLSNPIPELHGLDGTLGLVDLTNDEGGVGPGEGEESE 669
BLAST of mRNA_E_fasciculatus_S2_contig917.17235.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE) HSP 1 Score: 289 bits (739), Expect = 6.140e-88 Identity = 187/371 (50.40%), Postives = 217/371 (58.49%), Query Frame = -2
Query: 753 EELCSLIEPVAKLIATCQQTHVPTGQAALLGLAALKLSTLNVDVPLDIPTPARKPTQGGTEGFGGEEGTTARAHNDLTRVGREAREHLASALNWRDFDARYKSTVSDRT-DLVFDMQMGLHPCTAGLEYVDRLAPTEGHAAVVKKSVTDKLIALAVELAAKEAER----------------------NAHPTFANAESQKEATTSAIMAGLGLIKTRDEGASASPIER----ARAELEALRSLDVGALSGDVGCEGVLKWWKRWEHSYPLLARAARVVFAAPASVMVQERDLSAAGRMMTSSRSTGDAKYVEMVLFLHGNLDLIPENIPELPAGGVDGPHTKIPGRLSNPMPELHVLDGAFGPLDLTDGDE 1784
+EL S+I+PVA+LI T QQTHVPTGQAA LGLAALKLST NVD LD+ TPAR QG EG GG E T V R YK S +T D VFDMQMGLHP TA L+YVD+LA ++ HAA V K +TDK+I LAVELA KE ER ++HP A A ++ E +A L L K R GA+AS A AE E LR ++ G+L+ D+GCEGVLKWW++WE SYPLLARAARV F APA+ GDAKYVEMVLFLHG LDL PE IPEL + H KIPGRLSNP+PELH LDG GP+DLT +E
Sbjct: 116 DELYSVIKPVAELIVTYQQTHVPTGQAAALGLAALKLSTFNVDARLDVLTPAR--AQGRPEGAGGVE-------PKATSVPR-----------------CYKPADSAKTTDFVFDMQMGLHPTTADLQYVDKLASSKVHAAFVTKRITDKIITLAVELATKEMERKQAGPEQHESVAKQARPAAAPKSSHPAVARARNKNEDAATAKFTSLRLFKKRRVGANASQQPTFEPMACAEFETLRGVEAGSLTDDLGCEGVLKWWEKWEGSYPLLARAARVDFGAPAA---------------------GDAKYVEMVLFLHGKLDLFPEQIPELRDEDI---HAKIPGRLSNPVPELHGLDGTLGPVDLTHDEE 436
BLAST of mRNA_E_fasciculatus_S2_contig917.17235.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE) HSP 1 Score: 281 bits (719), Expect = 4.970e-82 Identity = 177/357 (49.58%), Postives = 218/357 (61.06%), Query Frame = -2
Query: 747 EELCSLIEPVAKLIATCQQTHVPTGQAALLGLAALKLSTLNVDVPLDIPTPARKPTQGGTEGFGGEEG---TTARAHNDLTRVGREAREHLASALNWRDFDARYKSTVSDRTDLVFDMQMGLHPCTAGLEYVDRLAPTEGHAAVVKKSVTDKLIALAVELAAKEAERNA-----HPTFANAESQKEATTSAIMAGLGLIKTRDEGASASPI---ERARAELEALRSLDVGALSGDVGCEGVLKWWKRWEHSYPLLARAARVVFAAPASVMVQERDLSAAGRMMTSSRSTGDAKYVEMVLFLHGNLDLIPENIPELPAGGVDGPHTKIPGRLSNPMPELHVLDGAFGPLDLTDGDESE 1784
+EL S+I+P A++I CQQT VPTGQ A+L LAALKL TLNVD PL+I TPARK Q T G GG E +T R H+ T V + R+H+ +++W FD RYKS S TD V + PCT RL H V S T A A E AAK A + A HP F +++E T+ + A LGL + + P + ARAEL LR++ G+L+ + CE VLKWWK W H+YPLLAR ARVVF APAS V ERD S AGRMMTSSRST D+KYVEM++FLHGNLDLIPE+I +L TKIPGRL+NP+ L LDG F P+DLTD + S+
Sbjct: 377 DELYSIIKPAAQVIVKCQQTSVPTGQVAVLALAALKLITLNVDSPLEILTPARKLAQAETSGIGGGERPATSTPREHSLSTGVAKGTRQHICESVDWWWFDKRYKSAESQDTDYVSTCRW---PCTR-----PRLTCAALHTGDV--STTPAGSAAADEPAAKRARQAAAPGSVHPLFKAPVNKREEATTNMYASLGLFGPGGDEQNEEPPSFEQTARAELTNLRAVQGGSLAPGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAAA---RTKIPGRLANPVERLEQLDGVFAPVDLTDEEASD 720
BLAST of mRNA_E_fasciculatus_S2_contig917.17235.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE) HSP 1 Score: 251 bits (641), Expect = 5.830e-73 Identity = 146/282 (51.77%), Postives = 184/282 (65.25%), Query Frame = -2
Query: 747 TTARAHNDLTRVGREAREHLASALNWRDFDARYKSTVSDRTDLVFDMQMGLHPCTAGLEYVDRLAPTEGHAAVVKKSVTDKLIALAVELAAKEA----ERNAHPTFANAESQKEATTSAIMAGLGLIKTRDEGASASPIERARAELEALRSLDVGALSGDVGCEGVLKWWKRWEHSYPLLARAARVVFAAPASVMVQERDLSAAGRMMTSSRSTGDAKYVEMVLFLHGNLDLIPENIPELPAGGVDGPHTKIPGRLSNPMPELHVLDGAFGPLDLTDGDESE 1580
+T R H+ LT V R R+H+ +++WR FD RYKS S TD VFDMQM LHP TA L YVD+LA T A VK ++TDK+I+LAV+LA A + + P ++ A + A + A G +++E S + ARAEL LR++ G+L+ + CE VLKWWK W H+YPLLAR ARVV A AS V E D S AGRMMTSSRST D+KYVEM+LFLHGNLDLIPE+I +L TKIPGRL+NP+ L LDGAF P+DLTD + S+
Sbjct: 220 STPREHSLLTGVARGTRQHMCESVDWRWFDKRYKSAKSQDTDYVFDMQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALHTGDGSTTPAWSAAADKPAAKRARQAAAPG---SKEEPPSFE--QTARAELTKLRAVQGGSLAAGLRCEDVLKWWKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKLTEAVA---RTKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD 493
BLAST of mRNA_E_fasciculatus_S2_contig917.17235.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE) HSP 1 Score: 232 bits (592), Expect = 9.810e-69 Identity = 134/262 (51.15%), Postives = 165/262 (62.98%), Query Frame = -2
Query: 747 LASALNWRDFDARYKSTVSDRTDLVFDMQMGLHPCTAGLEYVDRLAPTEGHAAVVKKSVTDKLIALAVELAAKEAERNAHPTFANAESQKEATTSAIMAGLGLIKTRDEGASASPI---ERARAELEALRSLDVGALSGDVGCEGVLKWWKRWEHSYPLLARAARVVFAAPASVMVQERDLSAAGRMMTSSRSTGDAKYVEMVLFLHGNLDLIPENIPELPAGGVDGPHTKIPGRLSNPMPELHVLDGAFGPLDLTDGDESE 1523
+ +++WR FD RYKS S TD VFDMQM LHP TAGL YV++LA T A VK ++TDK+I L V LA A H + E T+ + A LGL +G + P + ARAEL LR++ G L+ + CE VLKWWK W H+YPLLAR ARVVF APAS V E S AGRM TSSRST D+ YVEM++FLHGNL+LIPE+I +L TK PGRL+NP+ L LDGAF P+DLTD + S+
Sbjct: 1 MCESVDWRRFDKRYKSAESQDTDYVFDMQMALHPTTAGLRYVEKLASTSAFAGAVKSTITDKVIFLTVRLAEAAA---LHTGDGSTTPAGEEATTNMHASLGLFGPGVDGQNEEPQSFKQTARAELTKLRAVQGGRLAARLRCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKLTEVVA---RTKFPGRLANPVDGLEPLDGAFAPVDLTDEEASD 256
BLAST of mRNA_E_fasciculatus_S2_contig917.17235.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE) HSP 1 Score: 130 bits (328), Expect = 1.370e-32 Identity = 71/111 (63.96%), Postives = 81/111 (72.97%), Query Frame = -2
Query: 747 WEHSYPLLARAARVVFAAPASVMVQERDLSAAGRMMTSSRSTGDAK-YVEMVLFLHGNLDLIPENIPELPAGGVDGPHTKIPGRLSNPMPELHVLDGAFGPLDLTDGDESE 1076
W H YPLLAR ARVVF APAS V ERD S AGRMMTSSR T D+ YVEM+LFLHGNLDLIPE+I +L +KIPGRL+NP+ L LDGAF P+DLTD + S+
Sbjct: 2 WAHVYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKLTEAVA---RSKIPGRLANPVEGLEQLDGAFAPVDLTDEEASD 109
BLAST of mRNA_E_fasciculatus_S2_contig917.17235.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU9_9PHAE) HSP 1 Score: 128 bits (322), Expect = 2.700e-31 Identity = 67/122 (54.92%), Postives = 77/122 (63.11%), Query Frame = -2
Query: 753 DVGCEGVLKWWKRWEHSYPLLARAARVVFAAPASVMVQERDLSAAGRMMTSSRSTGDAKYVEMVLFLHGNLDLIPENIPELPAGGVDGPHTK-IPGRLSNPMPELHVLDGAFGPLDLTDGDE 1115
++ CE VLKWWKRW SYPLLARA RVVF APAS A YVEM+LFLHGNLDLIP++IP LP G D K +PGRL NP P+L + GAFGP+DLT+ DE
Sbjct: 31 ELSCESVLKWWKRWMSSYPLLARATRVVFGAPAS-----------------------AAYVEMILFLHGNLDLIPDDIPALPTDGPDSATNKHMPGRLKNPNPKLERISGAFGPVDLTEEDE 129
BLAST of mRNA_E_fasciculatus_S2_contig917.17235.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE) HSP 1 Score: 124 bits (312), Expect = 3.980e-30 Identity = 60/79 (75.95%), Postives = 66/79 (83.54%), Query Frame = -2
Query: 879 DVGCEGVLKWWKRWEHSYPLLARAARVVFAAPASVMVQERDLSAAGRMMTSSRSTGDAKYVEMVLFLHGNLDLIPENIP 1115
++ C+ VLKWWKRW SYPLLARAARVVF APAS V E D AGR+MTSSRST DAKYVEM+LFLHGNLDLIPE+IP
Sbjct: 31 ELSCDSVLKWWKRWMSSYPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDIP 109
BLAST of mRNA_E_fasciculatus_S2_contig917.17235.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW12_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.860e-27 Identity = 66/109 (60.55%), Postives = 75/109 (68.81%), Query Frame = -2
Query: 747 HSYPLLARAARVVFAAPASVMVQERDLSAAGRMMTSSRSTGDAKY-VEMVLFLHGNLDLIPENIPELPAGGVDGPHTKIPGRLSNPMPELHVLDGAFGPLDLTDGDESE 1070
H+Y LL ARVVF APAS ERD S AGRMMTSSRS D+KY VEM+LFLHGNLDLIPE+I L T PGRL+NP+ L LDGAF P+DLTD + S+
Sbjct: 4 HAYLLLTGVARVVFGAPASAAALERDFSNAGRMMTSSRSAMDSKYYVEMILFLHGNLDLIPEDITTLTEAVA---RTMFPGRLANPVEGLKQLDGAFTPVDLTDEEASD 109 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig917.17235.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig917.17235.1 >prot_E_fasciculatus_S2_contig917.17235.1 ID=prot_E_fasciculatus_S2_contig917.17235.1|Name=mRNA_E_fasciculatus_S2_contig917.17235.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=363bp MHIQTPVPGVLPRGAYRSLSSPSVRSSGPNAPSSTCSSGMGFDNRPGILVback to top mRNA from alignment at E_fasciculatus_S2_contig917:5047..6831+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig917.17235.1 ID=mRNA_E_fasciculatus_S2_contig917.17235.1|Name=mRNA_E_fasciculatus_S2_contig917.17235.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1785bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig917:5047..6831+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig917:5047..6831+ >mRNA_E_fasciculatus_S2_contig917.17235.1 ID=mRNA_E_fasciculatus_S2_contig917.17235.1|Name=mRNA_E_fasciculatus_S2_contig917.17235.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1089bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig917:5047..6831+ (Ectocarpus fasciculatus EfasUO2)back to top |