prot_E_fasciculatus_S2_contig9086.17166.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9086.17166.1
Unique Nameprot_E_fasciculatus_S2_contig9086.17166.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length254
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9086.17166.1 vs. uniprot
Match: D7FM46_ECTSI (Putative Leucine Rich Repeat Protein Kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM46_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 3.980e-76
Identity = 155/226 (68.58%), Postives = 165/226 (73.01%), Query Frame = 0 
Query:   31 LQKLNHLKVFMVDWRELCDTHPFRNFRKACPPPTQAEMDRALCESRTIARARTLMSARAAASPPAPANLGQQQQIPPGYPGAATGLTH--PASNPETPVSSNGGGIPRGGGG----SRFKVLLGGGSSGSRNDTPSRLARARTAVGQPVPGGAAYDAGGEWGGGDGDGRARGNSGMFRVDEGVGGPVGGGGGQWMNAHPHQQYPAVGVPYNAPTAPYRGEDGVSAK 250
            LQKLNHLK+FMVDWREL DTHPFRNFRKA PPPTQAEMDRALCESRTIARARTLMSARAA  PPAP N   QQQIPPGYPGAA GL+H  P SNP+TP+SSNG              RFKV+L GGSSGSR+DTPSRL RA +AV  PV G AAY  G EW GG GDGRA GNSG              GGGQWMNAH HQ YP    PY+ PTAPYRGEDG+ +K
Sbjct:  603 LQKLNHLKIFMVDWRELSDTHPFRNFRKASPPPTQAEMDRALCESRTIARARTLMSARAAC-PPAPTNP-NQQQIPPGYPGAAAGLSHSNPGSNPQTPISSNGXXXXXXXXXXXXXDRFKVMLRGGSSGSRSDTPSRLGRATSAVEGPVSG-AAYGGGEEWVGG-GDGRAPGNSGD-------------GGGQWMNAHQHQ-YPGAAAPYHTPTAPYRGEDGIQSK 810
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BLAST of mRNA_E_fasciculatus_S2_contig9086.17166.1 vs. uniprot
Match: A0A6H5L5H1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H1_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 6.830e-65
Identity = 140/228 (61.40%), Postives = 153/228 (67.11%), Query Frame = 0 
Query:   31 LQKLNHLKVFMVDWRELCDTHPFRNFRKACPPPTQAEMDRALCESRTIARARTLMSARAAASPPAPANLGQQQQIPPGYPGAATGLTH--PASNPETPVSSNGGGIPRGGGGS----RFKVLLGGGSSGSRNDTPSRLARARTAVGQPVPGGAAYDAGGEWGGGDGDGRARGNSGMFRVDEGVGGPVGGGGGQWMNAHPHQQYPAVGVPYNAPTAPYRGEDGVSAKGR 252
            L+KLNHLKVF+VDWREL DTHPFRNFRKA PPPTQAEMDRALCESRTIARARTLMSARAAASPPAP NL  QQQIPPGYPGAA GL+H  P SN +TP+SSNG              RF+V+L GGSSGSRN+TPSRL RAR+    PVPG AAYD G EW GG                                 H H QYP    PY+APTAPYRGEDG+ +K +
Sbjct:  861 LRKLNHLKVFVVDWRELSDTHPFRNFRKASPPPTQAEMDRALCESRTIARARTLMSARAAASPPAPTNL-NQQQIPPGYPGAAAGLSHSNPGSNLQTPISSNGXXXXXXXXXXXXXXRFEVMLRGGSSGSRNNTPSRLVRARSTGEGPVPG-AAYDGGEEWVGGGXXXXXXXXXXXXXXX--------------XXXH-HHQYPGAAAPYHAPTAPYRGEDGILSKAK 1071
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9086.17166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FM46_ECTSI3.980e-7668.58Putative Leucine Rich Repeat Protein Kinase n=1 Ta... [more]
A0A6H5L5H1_9PHAE6.830e-6561.40Protein kinase domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..60
e-value: 7.7E-7
score: 30.7
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9086contigE_fasciculatus_S2_contig9086:4142..6009 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9086.17166.1mRNA_E_fasciculatus_S2_contig9086.17166.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9086 4142..6009 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9086.17166.1 ID=prot_E_fasciculatus_S2_contig9086.17166.1|Name=mRNA_E_fasciculatus_S2_contig9086.17166.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=254bp
GAIPAGLSGAVSLERLHLQCNGFTGNLPRSLQKLNHLKVFMVDWRELCDT
HPFRNFRKACPPPTQAEMDRALCESRTIARARTLMSARAAASPPAPANLG
QQQQIPPGYPGAATGLTHPASNPETPVSSNGGGIPRGGGGSRFKVLLGGG
SSGSRNDTPSRLARARTAVGQPVPGGAAYDAGGEWGGGDGDGRARGNSGM
FRVDEGVGGPVGGGGGQWMNAHPHQQYPAVGVPYNAPTAPYRGEDGVSAK
GRRK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf