mRNA_E_fasciculatus_S2_contig9029.17122.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9029.17122.1 vs.
Match: Glyco_hydro_114 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ77_9PHAE) HSP 1 Score: 520 bits (1340), Expect = 1.330e-182 Identity = 311/388 (80.15%), Postives = 328/388 (84.54%), Query Frame = 1
Query: 1 MKFAHIASICLAATAAPRLARAATATPNFDNLLSLVSQLQEEVMLLSTEYGAKDDEIALLVTQLTACEGSDDSQEEE------GDDSTPXXXXXXXXXXXXXXXEPTXSXXXVSEXXXXXXXXXXXXXXXXXAEEPDSPTPVSGGGFSFSKGNSWNXXXXXXXXXXXXXXVFFIDMDAGQAVIDELHGKGKGVVCYISIGTVEDWRDDAKQFPSSAIGGDVAGWAGEQWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYLE-PSTDVQVSEADQIEYNSWFADVVHAYGMGVGLKNVVELVPILVNKFDFALNEECHEWNECVVYQDTFLAEGKPVFNVEYNLGTSVCDEANALGLDTILKNYDLGAPFCSCVDSSRDVDCMH 1143
MKFAHIAS+CLAATAAPR+ARAAT NFDNLLSLV+QLQEEVMLLSTEYGAKDDEIA LVTQLT CE S + D+STPXXXXXXXXXX X XX TX XXX+ XXXXXXXXXXXXXXXXX P SP P SGGGF+FS+ +SWN VFFIDMDAGQ VIDELH KGKGVVCYISIGTVEDWRDDAK+FPSSAIGGDV+GWAGE+WVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVY E ST V VSEA+QIEYNSWFAD+VHAYGMGVGLKN VELVPILVNKFDFALNEECHEWNEC VY+DTFLAEGKPV+NVEYNLG SVCDEANALGLDTILK+YDL A FCSCVD SRDVDCMH
Sbjct: 1 MKFAHIASVCLAATAAPRIARAAT---NFDNLLSLVTQLQEEVMLLSTEYGAKDDEIASLVTQLTTCEQSTTTXXXXXXXXXXSDNSTPXXXXXXXXXXDXQXXX-TXXXXXIYXXXXXXXXXXXXXXXXXXXXXPGSPEPGSGGGFTFSRDSSWNYNLRTPVDTSADVDVFFIDMDAGQGVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYTEGSSTGVSVSEAEQIEYNSWFADIVHAYGMGVGLKNAVELVPILVNKFDFALNEECHEWNECNVYEDTFLAEGKPVYNVEYNLGNSVCDEANALGLDTILKSYDLDAAFCSCVDPSRDVDCMH 384
BLAST of mRNA_E_fasciculatus_S2_contig9029.17122.1 vs.
Match: Endo (alpha-1,4 polygalactosaminidase precusor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL2_ECTSI) HSP 1 Score: 221 bits (563), Expect = 6.100e-61 Identity = 115/234 (49.15%), Postives = 141/234 (60.26%), Query Frame = 1
Query: 436 GNSWNXXXXXXXXXXXXXXVFFIDMDAGQAVIDELHGKGKGVVCYISIGTVEDWRDDAKQFPSSAIGGDVAGWAGEQWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYLEPSTDVQVSEADQIEYNSWFADVVHAYGMGVGLKNVVELVPILVNKFDFALNEECHEWNECVVYQDTFLAEGKPVFNVEYNLGTSVCDEANALGLDTILKNYDLGAPFCSCVDSSRDVDC 1137
G+SW VFFID+D Q IDELHGKGK V CYIS+GTVE WR+D FPSS +G +GE W+D+ + VREIM RV+ A+S CDAVEPDN+ V+ E + +S+ +QI YN W A++V GM VGLK L+ +DFA YQ FL+EGKPVFNVEY+ CD +NALG+DTI KNYDL AP CSC + SRD DC
Sbjct: 180 GDSWQYNLDTPVNTDVDVDVFFIDLDVAQDTIDELHGKGKYVSCYISVGTVESWREDVGVFPSSVVGTASGDDSGENWIDITQESVREIMEDRVKKAASKGCDAVEPDNISVWNEQDSGFTISKDEQISYNKWVAELVQENGMKVGLKAGHSLIEDTSMYYDFA------------AYQIPFLSEGKPVFNVEYSKDYGGCDGSNALGIDTIFKNYDLKAPMCSCANPSRDHDC 401
BLAST of mRNA_E_fasciculatus_S2_contig9029.17122.1 vs.
Match: Glyco_hydro_114 (domain-containing protein n=3 Tax=Stigmatella TaxID=40 RepID=A0A1I0KAA5_9DELT) HSP 1 Score: 186 bits (472), Expect = 6.150e-53 Identity = 95/229 (41.48%), Postives = 138/229 (60.26%), Query Frame = 1
Query: 436 GNSWNXXXXXXXXXXXXXXVFFIDM-DAGQAVIDELHGKGKGVVCYISIGTVEDWRDDAKQFPSSAIGGDVAGWAGEQWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYLEPSTDVQVSEADQIEYNSWFADVVHAYGMGVGLKNVVELVPILVNKFDFALNEECHEWNECVVYQDTFLAEGKPVFNVEYN---LGTSVCDEANALGLDTILKNYDLGAPFCSC 1110
G W V+ +D+ D + ++ L +G+ V+CY S G+ E+WR DA FP++A+G + GW GE+W+D+ + VR+IM R+E+A CDAV+PDN+ Y +T +++ ADQ+ +N + A HA G+ VGLKN V V LVN FDF +NEEC +++EC F+A GKPVF++EY L +C +ANAL DT++KN DL AP SC
Sbjct: 52 GTRWQIQLNGTLNTSFNVAVYDVDLFDTPVSTLNALKAQGRKVICYFSAGSYENWRSDAGSFPAAALGNALDGWPGERWLDIRNTKVRDIMRTRIELARQKGCDAVDPDNVDGYAN-ATGFKLTSADQLSFNRFLATEAHARGLAVGLKNDVGQVAQLVNDFDFQVNEECFQYDECEELLP-FIAAGKPVFSIEYGGNALAQQICPQANALNFDTLVKNLDLDAPRISC 278
BLAST of mRNA_E_fasciculatus_S2_contig9029.17122.1 vs.
Match: Endo (alpha-1,4 polygalactosaminidase precusor n=2 Tax=Stigmatella aurantiaca TaxID=41 RepID=Q098C2_STIAD) HSP 1 Score: 186 bits (473), Expect = 1.200e-52 Identity = 97/229 (42.36%), Postives = 138/229 (60.26%), Query Frame = 1
Query: 436 GNSWNXXXXXXXXXXXXXXVFFIDM-DAGQAVIDELHGKGKGVVCYISIGTVEDWRDDAKQFPSSAIGGDVAGWAGEQWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYLEPSTDVQVSEADQIEYNSWFADVVHAYGMGVGLKNVVELVPILVNKFDFALNEECHEWNECVVYQDTFLAEGKPVFNVEYN---LGTSVCDEANALGLDTILKNYDLGAPFCSC 1110
G W V+ +D+ D A + L +G+ V+CY S G+ EDWR DAK FPS+ +G + GW GE+W+D+ VR+IM +R+E+A CDAV+PDN+ Y +T +++ ADQ+ +N + A H+ G+ VGLKN V+ V LVN FDF +NEEC +++EC + F+ GK VF++EY L SVC EANALG DT++KN +L A SC
Sbjct: 88 GTRWQIQLSGKLNTGFNVPVYDVDLFDTPTATLTALKSQGRKVICYFSAGSYEDWRPDAKSFPSAVLGKALDGWPGERWLDIRATSVRDIMRSRIELARQKGCDAVDPDNVDGYSN-NTGFRLTSADQLAFNRFLASEAHSRGLAVGLKNDVDQVTQLVNDFDFQVNEECLQYDECDTLRP-FITAGKAVFHIEYGGAALAQSVCPEANALGFDTLVKNLELDAARISC 314
BLAST of mRNA_E_fasciculatus_S2_contig9029.17122.1 vs.
Match: Endo (alpha-1,4 polygalactosaminidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V4LGC7_9DELT) HSP 1 Score: 184 bits (468), Expect = 1.050e-51 Identity = 104/247 (42.11%), Postives = 143/247 (57.89%), Query Frame = 1
Query: 382 EEPDSPTPVSGGGFSFSKGNSWNXXXXXXXXXXXXXXVFFIDM-DAGQAVIDELHGKGKGVVCYISIGTVEDWRDDAKQFPSSAIGGDVAGWAGEQWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYLEPSTDVQVSEADQIEYNSWFADVVHAYGMGVGLKNVVELVPILVNKFDFALNEECHEWNECVVYQDTFLAEGKPVFNVEY---NLGTSVCDEANALGLDTILKNYDLGAPFCSC 1110
+ PD+P V + + G W ++ ID+ DA QAVID L +G V+CY S G+ EDWR+DA FP +A+G + GW GE+W+D+ DVR IM AR++ A + CD VEPDN+ Y S ++ A Q++YN + A HA G+ VGLKN +E V L+ FD+AL+EEC +W+EC + + F+A GK VF VEY +L VC ANAL DT++K DL A C
Sbjct: 91 DTPDAPPGV----WRPAPGTRWQWQLSGPIDDSLDVDMYDIDLFDAPQAVIDGLRARGVAVICYFSAGSREDWREDAGDFPPAAVGEPLDGWPGERWLDIRSPDVRRIMQARLDRAVARRCDGVEPDNVDAYANDSG-FPLTAAHQLDYNRFLAAEAHARGLSVGLKNDLEQVEDLLADFDWALDEECFQWDECDLLRP-FVAAGKAVFQVEYGDASLAADVCPRANALDFDTLIKRLDLDAWRIPC 331
BLAST of mRNA_E_fasciculatus_S2_contig9029.17122.1 vs.
Match: Glyco_hydro_114 (domain-containing protein n=1 Tax=Nitrosomonas communis TaxID=44574 RepID=A0A1I4UB85_9PROT) HSP 1 Score: 180 bits (457), Expect = 5.830e-51 Identity = 97/206 (47.09%), Postives = 132/206 (64.08%), Query Frame = 1
Query: 493 VFFIDM-DAGQAVIDELHGKGKGVVCYISIGTVEDWRDDAKQFPSSAIGGDVAGWAGEQWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYLEPSTDVQVSEADQIEYNSWFADVVHAYGMGVGLKNVVELVPILVNKFDFALNEECHEWNECVVYQDTFLAEGKPVFNVEYNLGTS--VCDEANALGLDTILKNYDLGAPF 1101
V+ ID+ D+ Q++ID+LH KG VVCY S G+ E+WR+DA QFP + +G GWAGE+W+D+ +VR IM AR+ +A S CDAVEPDN+ Y T ++ DQI+YN + A H G+ VGLKN +E + L+ FDFA+NEECH + EC V + F+ +GK VFNVEY VC +++ALGL TI +L F
Sbjct: 49 VYDIDLFDSPQSLIDDLHAKGIAVVCYFSAGSWENWREDADQFPENVLGRK-NGWAGERWLDIRSNEVRSIMAARIGLARSKGCDAVEPDNVDGYSN-KTGFPLTYQDQIDYNRFLAMAAHTLGLKVGLKNDLEQINDLIGDFDFAINEECHRYRECDVLKP-FIDQGKAVFNVEYRTTKQDKVCAQSSALGLSTIFLPLELDDSF 251
BLAST of mRNA_E_fasciculatus_S2_contig9029.17122.1 vs.
Match: Endo (alpha-1,4 polygalactosaminidase (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1CLR0_9DELT) HSP 1 Score: 180 bits (457), Expect = 8.500e-51 Identity = 97/231 (41.99%), Postives = 136/231 (58.87%), Query Frame = 1
Query: 430 SKGNSWNXXXXXXXXXXXXXXVFFIDM-DAGQAVIDELHGKGKGVVCYISIGTVEDWRDDAKQFPSSAIGGDVAGWAGEQWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYLEPSTDVQVSEADQIEYNSWFADVVHAYGMGVGLKNVVELVPILVNKFDFALNEECHEWNECVVYQDTFLAEGKPVFNVEY---NLGTSVCDEANALGLDTILKNYDLGAPFCSC 1110
S G SW ++ ID+ D Q+VIDELH G+ V+CY S G+ E+WR DA +FP AIG + W GE+W+D+ +Q VR+IM R+ +A S CD V+PDN+ Y T ++ ADQ++YN + A HA G+ VGLKN V+ + LV+ FD+ LNEEC +++EC F+ GK VF +EY +L +C ANA+ DT++K DL A SC
Sbjct: 43 SPGTSWQIQLDGTIETSFVVEMYDIDLFDVPQSVIDELHRDGRVVICYFSAGSWEEWRPDADRFPQEAIGNRLDNWPGERWLDIRNQAVRQIMVERMRLAVSKRCDGVDPDNVDGYSN-DTGFALTFADQLDYNRFLAGQAHALGLAVGLKNDVDQIEQLVDDFDWQLNEECFQYDECDRLLP-FIQAGKAVFQIEYGGQSLADRICPRANAMNFDTLIKRIDLDAWRISC 271
BLAST of mRNA_E_fasciculatus_S2_contig9029.17122.1 vs.
Match: Glyco_hydro_114 (domain-containing protein n=2 Tax=Atopomonas hussainii TaxID=1429083 RepID=A0A1H7R5T2_9GAMM) HSP 1 Score: 179 bits (454), Expect = 1.580e-50 Identity = 90/191 (47.12%), Postives = 128/191 (67.02%), Query Frame = 1
Query: 493 VFFIDM-DAGQAVIDELHGKGKGVVCYISIGTVEDWRDDAKQFPSSAIGGDVAGWAGEQWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYLEPSTDVQVSEADQIEYNSWFADVVHAYGMGVGLKNVVELVPILVNKFDFALNEECHEWNECVVYQDTFLAEGKPVFNVEYN-LGTSVCDEANALG 1059
V+ ID+ D + I L +G+ VVCY S G+ EDWRDDA Q+P SA+G +++GW GE+W+D+ + VR ++ R+++A+S C AVEPDN+ Y + + +SEADQ+++N W AD HA +G+ LKN VEL+P LVN FDFALNE C+ +NEC Y F A+GK VF EY T +C++A + G
Sbjct: 52 VYDIDLYDTPASTIANLKAQGRIVVCYFSAGSWEDWRDDAAQYPQSALGNNLSGWPGERWLDIRNPQVRTLLAKRLDLAASKGCHAVEPDNIDGYSNDNG-LGLSEADQVDFNRWLADQAHARQLGIALKNAVELIPQLVNHFDFALNESCYRYNECGGYS-AFTAQGKAVFIAEYRKYSTKLCNKAASSG 240
BLAST of mRNA_E_fasciculatus_S2_contig9029.17122.1 vs.
Match: endo (alpha-1,4 polygalactosaminidase n=1 Tax=Pseudomonas sp. A3.4 TaxID=2919919 RepID=UPI001F4E8089) HSP 1 Score: 179 bits (453), Expect = 2.500e-50 Identity = 89/191 (46.60%), Postives = 126/191 (65.97%), Query Frame = 1
Query: 493 VFFIDM-DAGQAVIDELHGKGKGVVCYISIGTVEDWRDDAKQFPSSAIGGDVAGWAGEQWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYLEPSTDVQVSEADQIEYNSWFADVVHAYGMGVGLKNVVELVPILVNKFDFALNEECHEWNECVVYQDTFLAEGKPVFNVEYN-LGTSVCDEANALG 1059
V+ ID+ D + I L +G+ VVCY S G+ EDWRDDA Q+P+ A+G ++ GW GE+W+D+ + VR ++ R+++A S CDAVEPDN+ Y S + +++ADQ+++N W A HA + + LKN VELVP LVN FDFALNE C+ +NEC Y + F A+GK VF EY +C++ANA G
Sbjct: 56 VYDIDLYDTPSSTIGNLKAQGRIVVCYFSAGSWEDWRDDAAQYPTQALGNNLDGWPGERWLDIRNSTVRTLLAKRMDLAVSKGCDAVEPDNVDGYSN-SNGLGLTKADQLDFNRWLASAAHARNLAIALKNAVELVPDLVNHFDFALNESCYRYNECNAY-NAFTAQGKAVFVAEYRKYNNKLCNKANASG 244
BLAST of mRNA_E_fasciculatus_S2_contig9029.17122.1 vs.
Match: Endo (alpha-1,4 polygalactosaminidase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X9IZM4_9DELT) HSP 1 Score: 180 bits (456), Expect = 6.550e-50 Identity = 100/239 (41.84%), Postives = 140/239 (58.58%), Query Frame = 1
Query: 406 VSGGGFSFSKGNSWNXXXXXXXXXXXXXXVFFIDM-DAGQAVIDELHGKGKGVVCYISIGTVEDWRDDAKQFPSSAIGGDVAGWAGEQWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYLEPSTDVQVSEADQIEYNSWFADVVHAYGMGVGLKNVVELVPILVNKFDFALNEECHEWNECVVYQDTFLAEGKPVFNVEYN---LGTSVCDEANALGLDTILKNYDLGAPFCSC 1110
VS G + + G W ++ ID+ +A QAVID L +G V+CY S G+ E+WR+DA FP++A+G + GW GE+W+D+ DVR IM AR++ A + CD VEPDN+ Y S ++ A Q++YN + A HA G+ VGLKN +E V L+ FD+ALNEEC +W+EC + + F+ GK VF VEY L ++C ANAL DT++K DL A C
Sbjct: 97 VSSGIWRPAPGTRWQWQLTGTIDDSLDVEMYDIDLFEAPQAVIDGLRARGVVVICYFSAGSREEWREDAGDFPAAAVGEPLDGWPGERWLDIRSPDVRRIMQARLDRAVARRCDGVEPDNVDAYANDSGFPLIA-AHQLDYNRFLAAEAHARGLSVGLKNDLEQVEDLLADFDWALNEECFQWDECDLLRP-FVVAGKAVFQVEYGDAGLAGTICPRANALDFDTLIKRLDLDAWRIPC 333 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9029.17122.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9029.17122.1 >prot_E_fasciculatus_S2_contig9029.17122.1 ID=prot_E_fasciculatus_S2_contig9029.17122.1|Name=mRNA_E_fasciculatus_S2_contig9029.17122.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=382bp MKFAHIASICLAATAAPRLARAATATPNFDNLLSLVSQLQEEVMLLSTEYback to top mRNA from alignment at E_fasciculatus_S2_contig9029:2081..5100+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9029.17122.1 ID=mRNA_E_fasciculatus_S2_contig9029.17122.1|Name=mRNA_E_fasciculatus_S2_contig9029.17122.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3020bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9029:2081..5100+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9029:2081..5100+ >mRNA_E_fasciculatus_S2_contig9029.17122.1 ID=mRNA_E_fasciculatus_S2_contig9029.17122.1|Name=mRNA_E_fasciculatus_S2_contig9029.17122.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1146bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9029:2081..5100+ (Ectocarpus fasciculatus EfasUO2)back to top |