|
|
Homology
BLAST of mRNA_E_fasciculatus_S2_contig902.17115.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG0_ECTSI) HSP 1 Score: 317 bits (811), Expect = 3.180e-105 Identity = 158/175 (90.29%), Postives = 163/175 (93.14%), Query Frame = 1
Query: 394 MIEPRRKQGELSCCKLLKKTRIYVDDASTNVWRETWRDSKVIMNNPILDQAFEKHVQDYLCSESYDFVKEVERYVTHAESESAGELFVRFRRIVDAYIVSGSELELNIENAMRNKVLEIGERMIFLEAGIEKQRDIFNPSKEEAHKILDDNLLQSFLTSRTFLDACLRWQEAQAA 918
MIEPRRK GELSCCK LKKTRI VDDASTN WRETW DSKVIM+NPILDQAFEKHVQDYLCSESYDFVKEVERYVTHAE+ESA ELFV FRRIVD YIVSGSELELNIENAMRNKVLEIGERMIF+EAG+E+QR IFNP KEEAHKILDDNLLQSFLTSR FLDACLRWQE QAA
Sbjct: 1 MIEPRRKHGELSCCKRLKKTRICVDDASTNAWRETWHDSKVIMSNPILDQAFEKHVQDYLCSESYDFVKEVERYVTHAENESAAELFVHFRRIVDKYIVSGSELELNIENAMRNKVLEIGERMIFVEAGMERQRGIFNPPKEEAHKILDDNLLQSFLTSRNFLDACLRWQEVQAA 175
BLAST of mRNA_E_fasciculatus_S2_contig902.17115.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6J1_9PHAE) HSP 1 Score: 193 bits (491), Expect = 1.870e-56 Identity = 103/201 (51.24%), Postives = 130/201 (64.68%), Query Frame = 1
Query: 394 MIEPRRKQGELSCCKLLKKTRIYVDDASTNVWRETWRDSKVIMNNPILDQAFEKHVQDYLCSESYDFVKEVERYVTHAESESAGELFVRFRRIVDAYIVSGSELELNIENAMRNKVLE------------------------IGERMIFLEAGIEKQRDIFNPSKEEAHKILDDNLLQSFLTSRTFLDACLRWQEAQAAAA 924
M+EPRR+ GE+SC K KK + VDDA T WRE W +S+VIM+NP+LDQAFEKH QDYLCSESYDF++EV YV AE A + F F IV+ YI +GS+LE+NI AMR VLE IG+R+ FLEA E+QRD+FNP + E K++D+NL+ SF T + FLDAC +W+E Q A A
Sbjct: 1 MMEPRRRHGEVSCWKK-KKITVVVDDARTAAWRERWHNSQVIMSNPVLDQAFEKHAQDYLCSESYDFIQEVGCYVALAEQNPAEDRFAHFTNIVNVYISAGSKLEINIGTAMRTGVLERKARDNSTLFHDMCTSPNRSWFAKIGDRVRFLEATFERQRDVFNPPRMEISKMIDENLVHSFWTRQLFLDACKKWEEQQGAGA 200
BLAST of mRNA_E_fasciculatus_S2_contig902.17115.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMC0_9PHAE) HSP 1 Score: 182 bits (461), Expect = 2.260e-53 Identity = 92/106 (86.79%), Postives = 99/106 (93.40%), Query Frame = 1
Query: 601 EVERYVTHAESESAGELFVRFRRIVDAYIVSGSELELNIENAMRNKVLEIGERMIFLEAGIEKQRDIFNPSKEEAHKILDDNLLQSFLTSRTFLDACLRWQEAQAA 918
+VERYV HAE ESA ELFV FRRIVD YIVSGSELELNIE+AMRNKVLE+GER+IF+EAG+E+QR IFNPSKEEAHKILDDNLLQSFLTSR FLDACLRWQEAQAA
Sbjct: 3 QVERYVAHAEKESAAELFVHFRRIVDKYIVSGSELELNIESAMRNKVLEVGERVIFVEAGMERQRGIFNPSKEEAHKILDDNLLQSFLTSRKFLDACLRWQEAQAA 108
BLAST of mRNA_E_fasciculatus_S2_contig902.17115.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT6_9PHAE) HSP 1 Score: 166 bits (421), Expect = 1.070e-46 Identity = 90/184 (48.91%), Postives = 113/184 (61.41%), Query Frame = 1
Query: 394 MIEPRRKQGELSCCKLLKKTRIYVDDASTNVWRETWRDSKVIMNNPILDQAFEKHVQDYLCSESYDFVKEVERYVTHAESESAGELFVRFRRIVDAYIVSGSELELNIENAMRNKVLEIGE-------------------RMIFLEAGIEKQRDIFNPSKEEAHKILDDNLLQSFLTSRTFLDA 888
MIEPR GE+SCCK KK ++++DDA W+E+W +S IM++PILD+AFEKHVQDYLC ESYDFVK IVD YI++GSE+E+NIE AMR KVLE+ + F++A E++RDIFNP K E KILDDNL+QSFL S+ FLDA
Sbjct: 1 MIEPRAHHGEVSCCKRKKKQKVFIDDAEVAAWKESWHNSTAIMSHPILDRAFEKHVQDYLCLESYDFVK-----------------------IVDMYILAGSEMEINIETAMRKKVLEVCNMRSHVQFLAPANAAAVRVGKEAFVKAVTERRRDIFNPPKAEVLKILDDNLVQSFLASQQFLDA 161
BLAST of mRNA_E_fasciculatus_S2_contig902.17115.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ93_9PHAE) HSP 1 Score: 128 bits (322), Expect = 2.980e-33 Identity = 59/71 (83.10%), Postives = 63/71 (88.73%), Query Frame = 1
Query: 394 MIEPRRKQGELSCCKLLKKTRIYVDDASTNVWRETWRDSKVIMNNPILDQAFEKHVQDYLCSESYDFVKEV 606
MIEPRR+ GELSC KLLKK +IYVDD TN WRETW DSKVIM+NP+LD AFEKHVQDYLCSESYDFVKEV
Sbjct: 1 MIEPRRENGELSCWKLLKKAKIYVDDGGTNAWRETWHDSKVIMSNPMLDPAFEKHVQDYLCSESYDFVKEV 71
BLAST of mRNA_E_fasciculatus_S2_contig902.17115.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE15_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.230e-12 Identity = 80/321 (24.92%), Postives = 139/321 (43.30%), Query Frame = 1
Query: 16 RNSIAIFLGTV--FMILLGICAMLQHVAPEVYGENPTEDCMYLGDWWFWCPSCFLMILAGSRLFTELYRLQDMINMAKEISTIARVWLVFAVPYHSTIVLNAFDVVDMPRQLSFVLWLC-----IALTQMCTFMIEPR-----RKQGELSCCKLLKKTRIYVDDASTNVWRETWRDSKVIMNNPILDQAFEKHVQDYLCSESYDFVKEVERYVTHAESESAGELFVRFRRIVDAYIVSGSELELNIENAMRNKVLEIGERMIFLEAGIEKQRDIFNPSKEEAHKILDDNLLQSFLTSRTFLDACLRWQEAQAAAASASSKV 942
R A+ +G+V + GI +H + E Y C+ W FW + L L QD I M EI + VFA PY L D++ ++ +L +C + + +P ++QG + ++ Y++DA + + + W+ S ++ P L+ AF HV+ LC ESY F+ E Y + A E E + F ++V I S E +++ + IF+ E +R IF + E ++LD NL+ SF+ ++ ++ AC + ++++ASAS+ V
Sbjct: 117 RAQAAVIIGSVSGLAAMAGILQSTKHASSEGY-------CIGHYPWAFWVGVLLSITPPYMWLIKRLAEAQDNIGMGNEIGRALAAFYVFAGPYFILEALMFNDIIPFDTRIHILLMVCFFSIIVDVNYYSRRYWDPASTSKPKQQGRWRFNRSVRTAVAYLEDA-VSTYSKQWKTSIDMIQVPALNVAFAAHVERCLCYESYKFLAESMAYTSSA-FEDPEEQYAAFEKVVATCIAVNSTFE----------IMKYRDETIFILLEPEARRTIFKEAAAEVARMLDQNLIASFVGTKQYIAACEE-EVRRSSSASASATV 417
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig902.17115.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 6
| Match Name | E-value | Identity | Description | |
| RGS | 3.180e-105 | 90.29 | domain-containing protein n=1 Tax=Ectocarpus silic... | [more] |
| RGS | 1.870e-56 | 51.24 | domain-containing protein n=1 Tax=Ectocarpus sp. C... | [more] |
| RGS | 2.260e-53 | 86.79 | domain-containing protein n=1 Tax=Ectocarpus sp. C... | [more] |
| RGS | 1.070e-46 | 48.91 | domain-containing protein n=1 Tax=Ectocarpus sp. C... | [more] |
| Uncharacterized | 2.980e-33 | 83.10 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
| Uncharacterized | 1.230e-12 | 24.92 | protein n=1 Tax=Tribonema minus TaxID=303371 RepID... | [more] |
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 61.2 |
| Seed ortholog evalue | 1.2e-06 |
| Seed eggNOG ortholog | 2880.D8LTR6 |
| Model size | 1191 |
| Hectar predicted targeting category | signal anchor |
| Exons | 8 |
| EggNOG free text desc. | Regulator of G protein signaling domain |
| EggNOG OGs | 2D0MX@1,2SERP@2759 |
| Cds size | 1191 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842556.5558476-CDS-E_fasciculatus_S2_contig902:2542..2814 | 1696842556.5558476-CDS-E_fasciculatus_S2_contig902:2542..2814 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig902 2543..2814 - |
| 1696842556.5692391-CDS-E_fasciculatus_S2_contig902:3326..3498 | 1696842556.5692391-CDS-E_fasciculatus_S2_contig902:3326..3498 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig902 3327..3498 - |
| 1696842556.5797575-CDS-E_fasciculatus_S2_contig902:4045..4189 | 1696842556.5797575-CDS-E_fasciculatus_S2_contig902:4045..4189 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig902 4046..4189 - |
| 1696842556.5910127-CDS-E_fasciculatus_S2_contig902:4869..4959 | 1696842556.5910127-CDS-E_fasciculatus_S2_contig902:4869..4959 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig902 4870..4959 - |
| 1696842556.601928-CDS-E_fasciculatus_S2_contig902:5425..5549 | 1696842556.601928-CDS-E_fasciculatus_S2_contig902:5425..5549 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig902 5426..5549 - |
| 1696842556.614727-CDS-E_fasciculatus_S2_contig902:6673..6779 | 1696842556.614727-CDS-E_fasciculatus_S2_contig902:6673..6779 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig902 6674..6779 - |
| 1696842556.6234667-CDS-E_fasciculatus_S2_contig902:7759..7935 | 1696842556.6234667-CDS-E_fasciculatus_S2_contig902:7759..7935 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig902 7760..7935 - |
| 1696842556.6332908-CDS-E_fasciculatus_S2_contig902:8237..8344 | 1696842556.6332908-CDS-E_fasciculatus_S2_contig902:8237..8344 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig902 8238..8344 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig902.17115.1 >prot_E_fasciculatus_S2_contig902.17115.1 ID=prot_E_fasciculatus_S2_contig902.17115.1|Name=mRNA_E_fasciculatus_S2_contig902.17115.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=397bp
MFFLSRNSIAIFLGTVFMILLGICAMLQHVAPEVYGENPTEDCMYLGDWW FWCPSCFLMILAGSRLFTELYRLQDMINMAKEISTIARVWLVFAVPYHST IVLNAFDVVDMPRQLSFVLWLCIALTQMCTFMIEPRRKQGELSCCKLLKK TRIYVDDASTNVWRETWRDSKVIMNNPILDQAFEKHVQDYLCSESYDFVK EVERYVTHAESESAGELFVRFRRIVDAYIVSGSELELNIENAMRNKVLEI GERMIFLEAGIEKQRDIFNPSKEEAHKILDDNLLQSFLTSRTFLDACLRW QEAQAAAASASSKVRLFGRNSLEGSFGGISRSFSRAHDMMSREIGRSRKS SFGQRLTETMASTIVEDRVGSRLGAHAAHPLFPVLGQEKRNTAENK* back to topmRNA from alignment at E_fasciculatus_S2_contig902:2543..8344- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig902.17115.1 ID=mRNA_E_fasciculatus_S2_contig902.17115.1|Name=mRNA_E_fasciculatus_S2_contig902.17115.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5802bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig902:2543..8344- (Ectocarpus fasciculatus EfasUO2) ATGTTTTTCCTTTCTCGGAACAGCATTGCCATTTTTTTGGGGACGGTGTT
CATGATCTTACTAGGCATCTGCGCCATGCTTCAACACGTCGCACCCGAGG
TTTATGGGTGAGACGGATGGATGGATGGCTTCGACGCTTGACAAATGAGT
GACCACAAGATGTGCTCTGATACGAAGACCTCCGCCCCGTTGGTGGTTGC
AGCATGTATCGTGTCCACAAAGTTGTCTACAATAGTGTCGAAGCAATACC
AGTAGCTTGAGTGCCTGCGTGCGACCGCAACACATTCTCCGAGGAGGGAG
TGCCGGACTGCGCCACCATTTCGCATCGTATGCTACCCAGGCCCTTTGTT
TTGCCGGCAAGCATTCACTGCCACCGTGGTTTGCTTGCAAAACGTTCACC
GCCGCTCAGGGAAAATCCTACCGAGGACTGCATGTATCTCGGAGACTGGT
GGTTCTGGTGCCCTTCATGCTTCCTGATGATACTGGCGGGGTCAAGGTTG
TTCACAGAGCTTTATCGTCTGCAAGACATGATTAATATGGCCAAGGAAAT
TTCCACGATTGCTCGCGTGTGGCTTGTTTTCGCCGGTGAGTGCCTAGGCG
TTGGTGTGCACTACAAGTATGCGAAGTAGGTTTGCCGAGAAAGATTTAAA
GAACGAAAAATAACCGGGTACCTTGGTATCATTGGCTTTCTCCACGGCCA
GACCTCAAGTGCTATCATGGAGACACCATGGATGTTACTTCCAGTTGGTT
ACTGACAACACAACCATACTTCAAGGTAATGTTCGCAGTGGTGGGTAGGG
AGTCCCTCTCTTCGTGATCCTTGGCTTTGGTTTGTATTTTTTTTAATGTA
CATGTTGTCGTCGTCCGAACGAGGTAAGATGTCTCCACCATATACCCCTG
TTCATACTAGAGACCACGGGCTGCCCATCGTTTGTGGGCTAGAGCTAATG
TGAGAAAAACAAAACAAACAAAAGCAACCTGTTTTATTCAACCTGTGGGC
AAACCAATGACCCGTGCCTATACCGGTCGCTGGGCATAAGGCAGAACGTG
TACAAGGTGAACACGACACCATCAGCGCACCAATGAAAATGAGAAGAACA
AGACAGCACCTTCGATGCCAATAACGACCTGACTCTGATACCCACTACAG
CTGGAGTTTCGAAATACCGATAGATGTTGAGCGCTCGAATGCTCCCAAGG
AGTTGATCCTCTTCCCTTAAGAGGCATCCTCTCCGCAAAAATTTCCAATA
CTCTTCAAAGTCCACGAAAGAGGTTTACTCTCTCGTTGTTCGCTAGCCCC
CGAGGTAGCTAACCACATACGAGTATGATTGGTGAGAGACCAAGGCATCG
GAGCCATCAACCACCGATTATTGTTCTCGCCCTGCTCGAAGTCGCCGCAA
ACTCCAGTCAGTCTTTGGTTCATGCAGGAAGTGTCCGACAGCCTTGAATA
TCTCCCAAATCTCAGCCTTTTCAGAAAAAACCGAAGGCTTCCAACTAACC
TCTTCCTCCCCCCCCCCCCCCCGCGTGCCTTCCTCCTCTTTTGGAATCAC
ACACCCTCATCACAGTGCCCTACCATTCGACCATCGTGCTCAACGCGTTC
GACGTGGTGGATATGCCGAGGCAACTTTCTTTTGTTCTGTGGCTGTGTAT
AGCCCTGACACAAATGTGCACGTGAGTTACAATAAAGTGGGTTAATGGGA
GTGGAGCTCGAGGCAGTTGCAGGCCTTTTTTTCCCTGGTCGTCACTTTCC
AAACTTAGATATGGCCCGTGACAAGGCTTCTTTGTTGGCCGCATCTCTTT
CACAGCATCCATACGTAACTGCGGTGGGAGGTGTCTGTCTGTGTTGAGGC
ATGAAATATTGCATCGACCGCATTCGTCTGGCATCTAGAGTGGACTATCC
TGGAAAAATCTCAAGGCTATGTAGTTAAATAGTTAATGCGTATATCGTAT
TCGGACGAATAAGCGTATCCAATGTGTTTTTCTGGAATTAGCGAGTTCAC
GTGAAATTGCGTTTTGCGCGACCCCCCTCAACAGCAGGAAGGCCGCGAAG
GAGATCGAACGACAAAGGGTCCAGTCTCTGGATTCATGGTAGAATATTTG
TGGATGGATAACAACACCATACTCCTTCCTCCAGCGATATTTAGTTTAGT
GCTCCATAACCTGCAGCTGACCACTCGATCTGACTTCTATTTCTTCATGA
GGCTCGCCACCACAGATACCCTCAGCAATGTCCTCCCTACGATTGTTTCT
GGGCCTGTCTCCACTCCCTTTGCTCTGAATGTCTGTTCCTGCGGCCTGTC
GCCGTTGGCGGTTATTTGGATGTAGGCGGATCAAAGGATATTACGGGGTC
CACATTTATTTTTCGAAACTTTGGAGGCATTATTTCATCACCCTTTGGTG
CCAATGAATTGAATTTCTGCCGTTTACAACAGACACTTGTTTGGTCCGGT
TGGATGGGGTTCACGTATGGCTTGAGTTGTCTCACAAAAATATTTACCCG
GCGGGGGGGTCGCGGGTTGTTGTGATTGCCAATGCCTCGGCTTTGTAGCA
GCGGTGGATTTGAGCGCCGGGACCTGAGTCGACGGTCTACGAACTCCACC
GCTTACCTCGAAACAGGTGGTCAATTACTTGAAGGCAAAACTGATCCCCA
AAAATGACTCCCCCACAAAAAAAAGAAAGATCCCAAACACCCAAACCCCA
AACGCACGAATGGCCGAGACACCAAATCGTCGATGAGAAGAAGCCTGAAA
CGGTTTCTGTAACGCACGCCGAATGTGTCTCGGGAACATCCGCAGATTCA
TGATAGAGCCGCGGCGAAAGCAGGGCGAGTTGTCCTGTTGCAAACTTCTC
AAGAAGACTAGGATCTATGTTGATGATGCCAGCACCAACGTTTGGAGAGA
GACCTGGCGCGACTCGAAGGTAACGGAATAAACAAGACGTCGAAGGATTG
CCGGGATACACTGAAGAAGAGATGGGTCATGGTTTAGGAGGAGGTATTCT
CCCCGAGAAAGTCCGAAACGCGCTATGGTTCACATCATTCTCCTCGCTTG
AAGGAAGTTGGTTGCATGGAATCAACATTACGTCGTGTGCAACTCTGCTT
CAATCCGCAGTTTCGTCAATTTTGGAGAAGATATTCAAGATTCATTCACA
ACAACTATCGTAGGGAGGACAGACCAAGATACAAACAATGCGGCGAACAA
CATGGGCAACAGCCCTATCAGGATTCAGCATGGGGCAAACATCCAAAGCG
CTCGAAAAGCACGTGCTAGATTATGGTAGCCAAAATCTAGCACTGCATCA
TGAGCGCAGACATAATTTCGCTTGCCTTTCTACTGTGAAACGACTTGGAA
CCTGGCGCTTTCGGTTTGCATCCATTGGCTGGTAGGTCATAATGAACAAC
CCGATTCTGGACCAAGCGTTCGAGAAGCATGTCCAGGACTACCTGTGCTC
AGAGTCCTATGACTTCGTCAAGGAGGTCAGTGCAACTAAGCCTGATTGTA
CGAACCAGCGTAGATGTTGTTCGGAGATCAAGTCAGTGCGGTGCGATGGA
ACGATGACATCCTCTGTCGCAAACGTTTTGCGGAAACCTTTCGAGTCTTT
GCTGCAAGAAATGCAACGCTGAACCCATGCCCGTCGCACTTTAGGCCGTG
ACACCAAGTTTTCAAAAACCAAAATGATTCGTCCATCCCGCTTCTTTGAG
GTTAGGTATTACCAACCCGAGTATCCATTGCTGCCATTTTTTTATATTTG
CTGACCAAAGACTTTCGAATTAGGTCGATATTTTTCGGGGTCTAGGCCAC
ACGTTGGGGAGACACACAGACAAAAAACAAAAAAACACACATCATCTTGC
TACATTGGCTGCAAGGCACTGCGTATAAATCTTACAAACCCAAAAAAATA
CCAGCGGGGACTACACACACGCAGGAGTCCCGAAACTGACCAAATCTCGA
ATTGGTACACACCGTTCGACTTCTGAACCGATTAGTCCCGAACTTGTTTC
CCCACCTTCGAAAAGAAATGAGGGAGGGATGGGAGGGCAGGAAAATTTCT
TCCTTCTGTTCGACGAAAGAAACTTATCCTTTATTGCCACAGTGCCGAAT
CATGCTGTATTTTGTACATAAGACACAACACCACTCACTGCGACTGATGC
CGCAGGTGGAGCGATACGTTACACACGCAGAGAGCGAATCAGCTGGAGAG
CTATTCGTCCGCTTCCGAAGAATCGTCGACGCGTACATCGTGTCGGGGTC
GGAGCTGGAATTGAACATCGAAAACGCCATGAGGAATAAAGTGCTCGAGG
TCTGTGATGACGTTCGCACTTCAAGCCCCCCCTCTCTCCGAGGTTTTAGC
GAGGGTGTACCTCGACTGCTCTGTAGAACAAGACTCCATGTCCTTGGAGG
ACGTAAGAACATAGGCGTCGAGTGGGAGTTGACGCTGATGATGTGCCTCA
GGAATCGTTGGCTCGAAGACGTAACAAATCAAGTTGGAATCGTTGTGGGG
AGGCTGTTGGTAAGGCCTGAAAAGAACAAGCGCCAGTCTTGTCCTGCTTC
CCCGGCAAGAAAGGCGTATAGTGTAGAAGGAAGGCTTCGGTTCCGGGTGC
GGAGCATGAGACGGCAAACGGGGATCTCCTGCAGAGATTATCTTGATGCT
CAAAGAAACGACTCGTCTGAATTCGTATCCATACCCGCTGCCCCGCGGGT
TTCGAGTACACACGACTGTGCGTCAAAAGTCTCACGGGTGGGTCATGTCG
AATGGGACATACAGGCAGACCCTCCTCGAACGCCCTGAAGGTGTCACGGA
TTTGACCGTCTCACTTCCCGTCCCCCGATGCTAACCCTTCTGAAAGATCG
GGGAAAGGATGATATTTCTGGAGGCTGGGATTGAAAAGCAGCGAGATATC
TTCAACCCTTCGAAGGAAGAAGCGCACAAGATTCTTGATGACAATCTCCT
GCAATCGTTTTTGACCAGCCGGACGTTTCTCGACGCCTGCCTTCGTTGGC
AGGAAGCACAAGCCGCAGGTGACCATGACTATGTTGTTTTTTTACCGCAC
TAGTCTAAATAGACGATCCCTTGATTGCAAAGTTTGTATGCATCTCGTCT
CTCGTATAATTTTTTAATGATCTGGGTTCGTTTTTGATTCCGCTTTGATT
TCTACACCTACCTGAATACCACCACTTTTGAGGTAGTTCACCTGTGACCA
CGGAACGTGTCCGCGTCAGTGGACCGTAGGGATGTTTGCAGGTACTGAGC
AAAGACCGGAACGTTTTTTAACGCGAGAACAACAGCAGCACACCACTGTC
GGCCGAAGTCAAAGTGTTCTCAAACACGTTGTTTATTTGCCGTGGACGTG
GCAGCCGGCGTCAGCAGAAGTATGCCATCGTTTCGAGGCCAACCCCCATA
GTTGAGCGATCCGGTGTCCGCGATGAGTTAGTTTCATATGCTGCAGGCCG
AAACAACCTGCGGGACCATGTTTCTCTAACTATATTGCTTCGTTCATATG
CTTTGTCGTCCCTCTTCTTGACGAGAATAGCAGCATCCGCGTCCAGTAAG
GTACGCCTATTTGGACGGAATAGCCTCGAGGGTTCGTTTGGCGGGATTTC
ACGTTCGTTCTCTCGTGCACACGACATGATGAGTCGGGAAATTGGCCGCT
CGAGGAAAAGCAGCTTCGGGCAAAGACTAACAGAAACTATGGCGTCGACC
ATTGTGGAAGACAGAGTTGGGTCGCGTTTGGGTGCGCACGCGGCACACCC
TTTGTTTCCCGTCCTTGGGCAGGAGAAGAGAAATACCGCCGAGAACAAAT
AG back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig902:2543..8344- >mRNA_E_fasciculatus_S2_contig902.17115.1 ID=mRNA_E_fasciculatus_S2_contig902.17115.1|Name=mRNA_E_fasciculatus_S2_contig902.17115.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1191bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig902:2543..8344- (Ectocarpus fasciculatus EfasUO2) ATGTTTTTCCTTTCTCGGAACAGCATTGCCATTTTTTTGGGGACGGTGTT CATGATCTTACTAGGCATCTGCGCCATGCTTCAACACGTCGCACCCGAGG TTTATGGGGAAAATCCTACCGAGGACTGCATGTATCTCGGAGACTGGTGG TTCTGGTGCCCTTCATGCTTCCTGATGATACTGGCGGGGTCAAGGTTGTT CACAGAGCTTTATCGTCTGCAAGACATGATTAATATGGCCAAGGAAATTT CCACGATTGCTCGCGTGTGGCTTGTTTTCGCCGTGCCCTACCATTCGACC ATCGTGCTCAACGCGTTCGACGTGGTGGATATGCCGAGGCAACTTTCTTT TGTTCTGTGGCTGTGTATAGCCCTGACACAAATGTGCACATTCATGATAG AGCCGCGGCGAAAGCAGGGCGAGTTGTCCTGTTGCAAACTTCTCAAGAAG ACTAGGATCTATGTTGATGATGCCAGCACCAACGTTTGGAGAGAGACCTG GCGCGACTCGAAGGTCATAATGAACAACCCGATTCTGGACCAAGCGTTCG AGAAGCATGTCCAGGACTACCTGTGCTCAGAGTCCTATGACTTCGTCAAG GAGGTGGAGCGATACGTTACACACGCAGAGAGCGAATCAGCTGGAGAGCT ATTCGTCCGCTTCCGAAGAATCGTCGACGCGTACATCGTGTCGGGGTCGG AGCTGGAATTGAACATCGAAAACGCCATGAGGAATAAAGTGCTCGAGATC GGGGAAAGGATGATATTTCTGGAGGCTGGGATTGAAAAGCAGCGAGATAT CTTCAACCCTTCGAAGGAAGAAGCGCACAAGATTCTTGATGACAATCTCC TGCAATCGTTTTTGACCAGCCGGACGTTTCTCGACGCCTGCCTTCGTTGG CAGGAAGCACAAGCCGCAGCAGCATCCGCGTCCAGTAAGGTACGCCTATT TGGACGGAATAGCCTCGAGGGTTCGTTTGGCGGGATTTCACGTTCGTTCT CTCGTGCACACGACATGATGAGTCGGGAAATTGGCCGCTCGAGGAAAAGC AGCTTCGGGCAAAGACTAACAGAAACTATGGCGTCGACCATTGTGGAAGA CAGAGTTGGGTCGCGTTTGGGTGCGCACGCGGCACACCCTTTGTTTCCCG TCCTTGGGCAGGAGAAGAGAAATACCGCCGAGAACAAATAG back to top
|