prot_E_fasciculatus_S2_contig8958.17049.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8958.17049.1
Unique Nameprot_E_fasciculatus_S2_contig8958.17049.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length78
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8958.17049.1 vs. uniprot
Match: D8LL31_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL31_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 1.260e-23
Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 0 
Query:    1 QVTPRVVNNVPQDKTLSENELQHGDIILFQIRPDKVVKPEGEDKMDVEGQD 51
            QVTPRVVN VPQDKTLSENELQHGDIILFQIRPDKVVKPEGEDKMDVEGQD
Sbjct: 1068 QVTPRVVNKVPQDKTLSENELQHGDIILFQIRPDKVVKPEGEDKMDVEGQD 1118
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BLAST of mRNA_E_fasciculatus_S2_contig8958.17049.1 vs. uniprot
Match: A0A6H5KU31_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU31_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 6.190e-13
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 0 
Query:    1 QVTPRVVNNVPQDKTLSENELQHGDIILFQIRPDK 35
            QVTPRVVN VPQDKTLSENELQHGDIILFQIRPDK
Sbjct: 1111 QVTPRVVNKVPQDKTLSENELQHGDIILFQIRPDK 1145
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8958.17049.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LL31_ECTSI1.260e-2398.04USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KU31_9PHAE6.190e-1397.14USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8958contigE_fasciculatus_S2_contig8958:3317..4128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8958.17049.1mRNA_E_fasciculatus_S2_contig8958.17049.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8958 3317..4130 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8958.17049.1 ID=prot_E_fasciculatus_S2_contig8958.17049.1|Name=mRNA_E_fasciculatus_S2_contig8958.17049.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=78bp
QVTPRVVNNVPQDKTLSENELQHGDIILFQIRPDKVVKPEGEDKMDVEGQ
DQPQQQQQQQGAGSGHGGAAAAAAAPDG
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