prot_E_fasciculatus_S2_contig890.17004.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig890.17004.1
Unique Nameprot_E_fasciculatus_S2_contig890.17004.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length98
Homology
BLAST of mRNA_E_fasciculatus_S2_contig890.17004.1 vs. uniprot
Match: D7G036_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G036_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 9.790e-57
Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 0
Query:    1 MQDKLHAPPEFDGPVRDRKCTDVIFTLAIIIMWITMTAVGISSVQQGDVRELLAPTDYEGNLCGFDDGYKNSSKLYYANNVGSGVCVSTCPS 92
            MQDKL APPEFDGPVRDRKCTD+IFTLAIIIMWITMT VGISSVQQGDVRELLAPTDYEGNLCGFDDGY++  KLYYANNVGSGVC  +CPS
Sbjct:    1 MQDKLTAPPEFDGPVRDRKCTDIIFTLAIIIMWITMTVVGISSVQQGDVRELLAPTDYEGNLCGFDDGYEDRGKLYYANNVGSGVCEKSCPS 92          
BLAST of mRNA_E_fasciculatus_S2_contig890.17004.1 vs. uniprot
Match: A0A6H5JW76_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW76_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 1.530e-52
Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0
Query:    1 MQDKLHAPPEFDGPVRDRKCTDVIFTLAIIIMWITMTAVGISSVQQGDVRELLAPTDYEGNLCGFDDGYKNSSKLYYANNVGSGVCVSTCPSETDL 96
            MQDKL A PEFDGPVR+RKCTD+IF LAIIIMWITMTAVGISS+QQGDVRELLAPTDYEGNLCGFDDGY++  KLYYANNVGSGVCV TCPS TDL
Sbjct:    4 MQDKLTASPEFDGPVRERKCTDIIFMLAIIIMWITMTAVGISSIQQGDVRELLAPTDYEGNLCGFDDGYEDLGKLYYANNVGSGVCVGTCPSTTDL 99          
BLAST of mRNA_E_fasciculatus_S2_contig890.17004.1 vs. uniprot
Match: A0A7S2VAM1_9STRA (Choline transporter-like protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VAM1_9STRA)

HSP 1 Score: 110 bits (274), Expect = 9.030e-27
Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = 0
Query:    3 DKLHAPPEFDGPVRDRKCTDVIFTLAIIIMWITMTAVGISSVQQGDVRELLAPTDYEGNLCGFDDGYKNSS---KLYYANNVGSGVCVSTCP 91
            DKL AP ++DGPV DR CTD++  L +  MWI MT VGI +V +GD R+++ P DY+GN+CG D G  + S   KLYY NN G+GVCV  CP
Sbjct:   10 DKLEAPADWDGPVEDRHCTDILLLLLLWGMWIAMTGVGIYAVTEGDYRKVVYPLDYDGNICGTDFGSIDMSDHEKLYYVNNYGAGVCVKECP 101          
BLAST of mRNA_E_fasciculatus_S2_contig890.17004.1 vs. uniprot
Match: A0A6V2WBV2_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2WBV2_HETAK)

HSP 1 Score: 103 bits (258), Expect = 7.600e-24
Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 0
Query:    1 MQDKLHAPP---EFDGPVRDRKCTDVIFTLAIIIMWITMTAVGISSVQQGDVRELLAPTDYEGNLCGFDDGYKNSSKLYYANNVGSGVCVSTCPSETD 95
            + ++L AP    E++GP  +RKCTDV+F +AI+  W+ MT VG+ S+Q GD   L    DY GN+CG  + Y + SK+YY    GSGVCVS CPS TD
Sbjct:   18 LGERLKAPAGRDEYEGPTANRKCTDVLFFIAIVATWVCMTIVGVDSIQNGDYAVLTNGIDYNGNICGTGN-YSDYSKMYYVGYSGSGVCVSACPSTTD 114          
BLAST of mRNA_E_fasciculatus_S2_contig890.17004.1 vs. uniprot
Match: B7FYN0_PHATC (Choline transporter-like protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYN0_PHATC)

HSP 1 Score: 103 bits (256), Expect = 1.460e-23
Identity = 48/94 (51.06%), Postives = 60/94 (63.83%), Query Frame = 0
Query:    3 DKLHAPPEFDGPVRDRKCTDVIFTLAIIIMWITMTAVGISSVQQGDVRELLAPTDYEGNLCGFDDGYKNSSKLY--YANNVGSGVCVSTCPSET 94
            DKL AP +FDGP +DR CTD++  LA+I MW+ MT VGI +V  GD R +L P DY+GN+CG D G   +   Y  Y N+   GVCV  CP  T
Sbjct:    8 DKLVAPADFDGPTKDRHCTDILMLLALIAMWVAMTGVGIYAVTNGDYRLVLYPLDYDGNVCGTDFGLDMTEFPYLLYVNSYTGGVCVKECPDLT 101          
BLAST of mRNA_E_fasciculatus_S2_contig890.17004.1 vs. uniprot
Match: A0A7S4J5U8_9STRA (Choline transporter-like protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5U8_9STRA)

HSP 1 Score: 102 bits (254), Expect = 2.760e-23
Identity = 44/97 (45.36%), Postives = 65/97 (67.01%), Query Frame = 0
Query:    3 DKLHAPPEFDGPVRDRKCTDVIFTLAIIIMWITMTAVGISSVQQGDVRELLAPTDYEGNLCGFDDG---YKNSSKLYYANNVGSGVCVSTCPSETDL 96
            +KL APP+F GPV++R+CTDV+ +L +++ W  MT +G  +V  GD R ++ P DY+GN+CG + G    ++   LYY N+  +GVCV  CPS  DL
Sbjct:    9 EKLQAPPDFSGPVQNRRCTDVLCSLLLVLTWAAMTGLGFYAVSNGDYRVIVYPMDYDGNICGTNYGNIDMEDYPFLYYVNSYSAGVCVKECPSIEDL 105          
BLAST of mRNA_E_fasciculatus_S2_contig890.17004.1 vs. uniprot
Match: D8LIJ7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ7_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 6.140e-22
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 0
Query:    4 KLHAPPEFDGPVRDRKCTDVIFTLAIIIMWITMTAVGISSVQQGDVRELLAPTDYEGNLCGFDDGYKNSSKLYYANNVGSGVCVSTCPSETDLE 97
            KL AP + +G   DR+CTDV+F L +I+ W+ MT +G+  +  G+   LL   DY+G +CG DDG K+ SKLYY    G+GVCV  CP+ T+ +
Sbjct:   17 KLAAPDDIEGGA-DRRCTDVLFMLVLILAWLAMTYLGVDGISNGNPDLLLNGIDYDGRICGVDDGVKDKSKLYYIRFDGTGVCVEECPTVTNFD 109          
BLAST of mRNA_E_fasciculatus_S2_contig890.17004.1 vs. uniprot
Match: A0A6H5L007_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L007_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 7.490e-21
Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 0
Query:    7 APPEFDGPVRDRKCTDVIFTLAIIIMWITMTAVGISSVQQGDVRELLAPTDYEGNLCGFDDGYKNSSKLYYANNVGSGVCVSTCPSETDLE 97
            AP + +G   DR+CTDV+F L +I+ W+ MT +G+  +  G+   LL   DY+G +CG DDG K+ SKLYY    G+GVCV  CP+ T+ +
Sbjct:    4 APDDIEGGA-DRRCTDVLFMLVLILAWLAMTYLGVDGISNGNPDLLLNGIDYDGRICGVDDGVKDKSKLYYIRFDGTGVCVEECPTVTNFD 93          
BLAST of mRNA_E_fasciculatus_S2_contig890.17004.1 vs. uniprot
Match: A0A7S3Y2F1_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2F1_HETAK)

HSP 1 Score: 94.4 bits (233), Expect = 1.880e-20
Identity = 39/91 (42.86%), Postives = 60/91 (65.93%), Query Frame = 0
Query:    5 LHAPPEFDGPVRDRKCTDVIFTLAIIIMWITMTAVGISSVQQGDVRELLAPTDYEGNLCGFDDGYKNSSKLYYANNVGSGVCVSTCPSETD 95
            + A  +FDGPV++R+CTD+++   ++++WI MT +G  +V  GD+  +L P DY+G  CG  D Y++   LYY    G+GVCV +CP  TD
Sbjct:   12 IQAGHDFDGPVKNRRCTDLLWLGLLLVVWICMTVIGKQAVDNGDIDLILHPVDYQGRSCGVGD-YEDKPDLYYVRFDGTGVCVESCPQTTD 101          
BLAST of mRNA_E_fasciculatus_S2_contig890.17004.1 vs. uniprot
Match: A0A7S4R109_9STRA (Choline transporter-like protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R109_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.890e-20
Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 0
Query:    4 KLHAPPEFDGPVRDRKCTDVIFTLAIIIMWITMTAVGISSVQQGDVRELLAPTDYEGNLCGFDDGYKNSSKL---YYANNVGSGVCVSTCPS 92
            KL AP +FDGP ++R+CTDV  +L ++I WI MT +G  +V  GD R +L P DY+GN+CG D G  + +     Y+ N    GVCV  CPS
Sbjct:   13 KLIAPADFDGPTKNRRCTDVFCSLLLVIAWIAMTGIGAYAVTNGDYRFVLFPIDYDGNICGTDFGDVDMTDFEYFYFINIFTGGVCVKECPS 104          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig890.17004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G036_ECTSI9.790e-5789.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JW76_9PHAE1.530e-5287.50Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A7S2VAM1_9STRA9.030e-2754.35Choline transporter-like protein (Fragment) n=1 Ta... [more]
A0A6V2WBV2_HETAK7.600e-2448.98Choline transporter-like protein n=1 Tax=Heterosig... [more]
B7FYN0_PHATC1.460e-2351.06Choline transporter-like protein n=2 Tax=Phaeodact... [more]
A0A7S4J5U8_9STRA2.760e-2345.36Choline transporter-like protein n=1 Tax=Odontella... [more]
D8LIJ7_ECTSI6.140e-2245.74Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5L007_9PHAE7.490e-2145.05Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A7S3Y2F1_HETAK1.880e-2042.86Choline transporter-like protein n=1 Tax=Heterosig... [more]
A0A7S4R109_9STRA1.890e-2046.74Choline transporter-like protein n=2 Tax=Ditylum b... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007603Choline transporter-likePANTHERPTHR12385CTL TRANSPORTERcoord: 9..79
NoneNo IPR availablePANTHERPTHR12385:SF34CHOLINE TRANSPORTER-LIKE PROTEIN 2coord: 9..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..22
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig890contigE_fasciculatus_S2_contig890:1462..3153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig890.17004.1mRNA_E_fasciculatus_S2_contig890.17004.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig890 1462..3153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig890.17004.1 ID=prot_E_fasciculatus_S2_contig890.17004.1|Name=mRNA_E_fasciculatus_S2_contig890.17004.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=98bp
MQDKLHAPPEFDGPVRDRKCTDVIFTLAIIIMWITMTAVGISSVQQGDVR
ELLAPTDYEGNLCGFDDGYKNSSKLYYANNVGSGVCVSTCPSETDLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007603Choline_transptr-like