prot_E_fasciculatus_S2_contig89.17002.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig89.17002.1
Unique Name	prot_E_fasciculatus_S2_contig89.17002.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	487

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig89.17002.1 vs. uniprot
Match: D8LHX3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHX3_ECTSI)

HSP 1 Score: 860 bits (2223), Expect = 1.310e-313
Identity = 466/486 (95.88%), Postives = 474/486 (97.53%), Query Frame = 0

Query:    1 MGGAGNAAVVAVGRTFFRVAIVGYTLSGLAMFPSVILGVSKGYFEWEMDRCTCVVEQEAEAAAGSIVSSSSLTSGTTGTTAGASSSCVFGQDFAKVSIGWKEFTYDELVHTVGCPIATAAYEANPALDDDDLNLDNERSLYFFDEVYPLDGEFQKTDNPTQADESNGGAEAGGGVVAMQVVLSFFSILTYKMLKASYLSNGSHCSIGLALMTRLNLLVGVGTAAAIVSYWWLIEGRFGDEQKALTTALENILFDECWGETADDDAPGLQTFCPVRPWTFTGPGLPMMLGLFQVGLFLLMTLYMVWKAPTVEGVLDGSMDPTGVVLKPRVVEVEMVVGKALATDGDPDYDSENPLYNGAATMIRPYPLPKSAKAAKAXXXXXXXXXXXXXXXXXXXXXGSDTASSDYEAKDDPEMQDDLSVMQSEYAGPADLEMIVEESEEDRTSSRYESETRYSHAPSYSDTYSDYGDRPSRQQHSSRGGHAAPIR 486
            MGGAGNAAVVAVGRTFFRVAIVGYTLSGLAMFPSVILGVSKGYFEWEMDRCTCVVEQEA A  G  + SSS  SGT GTTAGASSSCVFGQDFAKVSIGWKEFTYD+LVHTVGCPIATA YEANPALDDDDLNLDNERSLYFFDEVYPLDGEFQKTDNPTQADESNGG+EAGGGVVAMQVVL+FFSILTYKMLKASYLSNGSHCSIGLALMTRLNLLVGVGTAAAIVS+WWLIEGRFGDEQKALTTALENILFDECWGETADDDA GLQTFCPVRPWTFTGPGLPMMLG+FQVGLFLLMTLYMVWKAPTVEGVLDGSMDPTGVVLKPRVVEVEMVVGKALATDGDPDYDSENPLYNGAATMIRPYPLPKSAKAAKAXXXXXXXXXXXXXXXXXXXXXGSDTASSDYEAKDDPEMQDDLSVMQSEYAGPADLEMIVEESEEDRTSSRYESETRYSHAPSYSDTYSDYGDRP+RQQH+SRG HAAPIR
Sbjct:    1 MGGAGNAAVVAVGRTFFRVAIVGYTLSGLAMFPSVILGVSKGYFEWEMDRCTCVVEQEAAATTGQPIVSSSSLSGT-GTTAGASSSCVFGQDFAKVSIGWKEFTYDKLVHTVGCPIATAFYEANPALDDDDLNLDNERSLYFFDEVYPLDGEFQKTDNPTQADESNGGSEAGGGVVAMQVVLTFFSILTYKMLKASYLSNGSHCSIGLALMTRLNLLVGVGTAAAIVSFWWLIEGRFGDEQKALTTALENILFDECWGETADDDAAGLQTFCPVRPWTFTGPGLPMMLGIFQVGLFLLMTLYMVWKAPTVEGVLDGSMDPTGVVLKPRVVEVEMVVGKALATDGDPDYDSENPLYNGAATMIRPYPLPKSAKAAKAXXXXXXXXXXXXXXXXXXXXXGSDTASSDYEAKDDPEMQDDLSVMQSEYAGPADLEMIVEESEEDRTSSRYESETRYSHAPSYSDTYSDYGDRPARQQHASRGSHAAPIR 485

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig89.17002.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig89.17002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LHX3_ECTSI	1.310e-313	95.88	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 171..193
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 233..283
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 306..486
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..170
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 214..232
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 194..213
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 284..305
None	No IPR available	TMHMM	TMhelix		coord: 15..37
None	No IPR available	TMHMM	TMhelix		coord: 283..305
None	No IPR available	TMHMM	TMhelix		coord: 214..233

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig89	contig	E_fasciculatus_S2_contig89:40384..44591 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig89.17002.1	mRNA_E_fasciculatus_S2_contig89.17002.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig89 40095..46494 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig89.17002.1 ID=prot_E_fasciculatus_S2_contig89.17002.1|Name=mRNA_E_fasciculatus_S2_contig89.17002.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=487bp
MGGAGNAAVVAVGRTFFRVAIVGYTLSGLAMFPSVILGVSKGYFEWEMDR
CTCVVEQEAEAAAGSIVSSSSLTSGTTGTTAGASSSCVFGQDFAKVSIGW
KEFTYDELVHTVGCPIATAAYEANPALDDDDLNLDNERSLYFFDEVYPLD
GEFQKTDNPTQADESNGGAEAGGGVVAMQVVLSFFSILTYKMLKASYLSN
GSHCSIGLALMTRLNLLVGVGTAAAIVSYWWLIEGRFGDEQKALTTALEN
ILFDECWGETADDDAPGLQTFCPVRPWTFTGPGLPMMLGLFQVGLFLLMT
LYMVWKAPTVEGVLDGSMDPTGVVLKPRVVEVEMVVGKALATDGDPDYDS
ENPLYNGAATMIRPYPLPKSAKAAKAAAVMEEDEATLAAAAAAAAAAGSD
TASSDYEAKDDPEMQDDLSVMQSEYAGPADLEMIVEESEEDRTSSRYESE
TRYSHAPSYSDTYSDYGDRPSRQQHSSRGGHAAPIR*