prot_E_fasciculatus_S2_contig8888.16990.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8888.16990.1
Unique Nameprot_E_fasciculatus_S2_contig8888.16990.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length133
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8888.16990.1 vs. uniprot
Match: D7G553_ECTSI (WD40 repeat-containing protein SMU1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G553_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 5.710e-56
Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 0
Query:    1 MSGVCVKTLSQAVGAVTSVDLTMDGMYLLASSRHGPVRTWDVRMGRPLLRYKGHQNTSSSFLRASLGAEEGLVFGGSDDCKVYVWHRRETQ 91
            MSGVCVKTLSQAVGAVTSVDLTMDGMYLLASSRHGPVRTWDVRMGRPLLRYKGHQNTSSSFLRA+LGAEEGLVFGGSDDCKVYVWHRRETQ
Sbjct:  304 MSGVCVKTLSQAVGAVTSVDLTMDGMYLLASSRHGPVRTWDVRMGRPLLRYKGHQNTSSSFLRATLGAEEGLVFGGSDDCKVYVWHRRETQ 394          
BLAST of mRNA_E_fasciculatus_S2_contig8888.16990.1 vs. uniprot
Match: A0A6G0WLP2_9STRA (WD40 repeat-containing protein SMU1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLP2_9STRA)

HSP 1 Score: 133 bits (334), Expect = 8.880e-34
Identity = 68/160 (42.50%), Postives = 87/160 (54.37%), Query Frame = 0
Query:    1 MSGVCVKTLSQAVGAVTSVDLTMDGMYLLASSRHGPVRTWDVRM--------------------------------GRPLLRYKGHQNTSSSFLRASLGAEEGLVFGGSDDCKVYVWHRRETQLLHALSGHTGTVYRGTWNAKQGLLASCSEDGTVRTWW 128
            +SG+CV TL Q +G VTSV L+ +G++LL  SR+   R WD+RM                                 RP+ R+KGHQNT+ + +RAS G  E  V GGS+D  VYVW     +LL  L GHTG  Y   W+  Q L+ASCS DGTV+TWW
Sbjct:  414 LSGLCVHTLRQTLGEVTSVSLSSNGLFLLTGSRNNSNRLWDMRMLTLPRTTLQSSSKDLSNTMKTPASSQTPVSLEQRPVQRFKGHQNTAKNVVRASFGPREAFVLGGSEDGAVYVWDVTTGKLLERLLGHTGVTYSAKWHENQALMASCSHDGTVKTWW 573          
BLAST of mRNA_E_fasciculatus_S2_contig8888.16990.1 vs. uniprot
Match: A0A7S2SNF5_9STRA (WD40 repeat-containing protein SMU1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNF5_9STRA)

HSP 1 Score: 112 bits (279), Expect = 4.760e-29
Identity = 53/115 (46.09%), Postives = 69/115 (60.00%), Query Frame = 0
Query:   14 GAVTSVDLTMDGMYLLASSRHGPVRTWDVRM-GRPLLRYKGHQNTSSSFLRASLGAEEGLVFGGSDDCKVYVWHRRETQLLHALSGHTGTVYRGTWNAKQGLLASCSEDGTVRTW 127
            G  TS+ L+ DG  LL S+RHG +R WD+R   RP+ RY GH+N+ SSF+R    A + +V  GSDD  V+VW     +    L  H   VYR  W+ +QGLLASCS+DG    W
Sbjct:   12 GEATSLALSSDGTLLLTSTRHGSIRLWDLRTTDRPIQRYAGHRNSVSSFIRCDFAAADSVVVSGSDDGAVHVWETATGEPYTTLLAHRAPVYRAAWSPRQGLLASCSQDGEALLW 126          
BLAST of mRNA_E_fasciculatus_S2_contig8888.16990.1 vs. uniprot
Match: A0A2X0MFG1_9BASI (WD40 repeat-containing protein SMU1 n=3 Tax=Microbotryum TaxID=34416 RepID=A0A2X0MFG1_9BASI)

HSP 1 Score: 119 bits (298), Expect = 1.180e-28
Identity = 61/115 (53.04%), Postives = 73/115 (63.48%), Query Frame = 0
Query:   13 VGAVTSVDLTMDGMYLLASSRHGPVRTWDVRMGRPLLRYKGHQNTSSSFLRASLGAEEGLVFGGSDDCKVYVWHRRETQLLHALSGHTGTVYRGTWNAKQGLLASCSEDGTVRTW 127
            +G VTSVD  M   YLL SSR   VR WDVRM RPL R+K H NTS +F+RAS  A   L+  GS+D  +Y+W R  +++L  L GH G VY   WN KQ LLAS   DG +RTW
Sbjct:  577 LGEVTSVD--MSDSYLLTSSRDNSVRLWDVRMLRPLKRFKAHSNTSHNFVRASF-AHASLLVSGSEDGVLYMWDRESSEVLQTLEGHRGIVYGAVWNDKQSLLASHGSDGLIRTW 688          
BLAST of mRNA_E_fasciculatus_S2_contig8888.16990.1 vs. uniprot
Match: A0A835YTG5_9STRA (WD40 repeat-containing protein SMU1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG5_9STRA)

HSP 1 Score: 117 bits (294), Expect = 3.030e-28
Identity = 51/83 (61.45%), Postives = 62/83 (74.70%), Query Frame = 0
Query:   46 RPLLRYKGHQNTSSSFLRASLGAEEGLVFGGSDDCKVYVWHRRETQLLHALSGHTGTVYRGTWNAKQGLLASCSEDGTVRTWW 128
            RPL R++GHQNTSSSFLRA+  AEE L+ GGSD   ++VW R+   L+  L GH+G  YRGTW+ KQ + ASC EDGTVRTWW
Sbjct:  447 RPLQRFRGHQNTSSSFLRATFAAEESLILGGSDCGALHVWDRKNGDLIQKLKGHSGAAYRGTWSDKQSMAASCGEDGTVRTWW 529          
BLAST of mRNA_E_fasciculatus_S2_contig8888.16990.1 vs. uniprot
Match: A0A1Y2G1L4_9BASI (WD40 repeat-containing protein SMU1 n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2G1L4_9BASI)

HSP 1 Score: 117 bits (293), Expect = 4.850e-28
Identity = 59/115 (51.30%), Postives = 72/115 (62.61%), Query Frame = 0
Query:   13 VGAVTSVDLTMDGMYLLASSRHGPVRTWDVRMGRPLLRYKGHQNTSSSFLRASLGAEEGLVFGGSDDCKVYVWHRRETQLLHALSGHTGTVYRGTWNAKQGLLASCSEDGTVRTW 127
            +G VTSVD  M   YLL +SR   VR WDVRM RPL R+K H NTS +F+RAS  A   L+  GS+D  +Y+W R  +++L  L GH G VY   WN KQ LLAS   D  +RTW
Sbjct:  495 LGEVTSVD--MSDSYLLTNSRDNSVRLWDVRMLRPLRRFKAHSNTSQNFIRASF-AHSSLLVSGSEDGVLYMWDRESSEVLQTLEGHDGIVYGAVWNDKQSLLASYGSDAKIRTW 606          
BLAST of mRNA_E_fasciculatus_S2_contig8888.16990.1 vs. uniprot
Match: A0A238FLD2_9BASI (WD40 repeat-containing protein SMU1 n=1 Tax=Microbotryum intermedium TaxID=269621 RepID=A0A238FLD2_9BASI)

HSP 1 Score: 111 bits (277), Expect = 7.980e-26
Identity = 58/123 (47.15%), Postives = 73/123 (59.35%), Query Frame = 0
Query:    5 CVKTLSQAVGAVTSVDLTMDGMYLLASSRHGPVRTWDVRMGRPLLRYKGHQNTSSSFLRASLGAEEGLVFGGSDDCKVYVWHRRETQLLHALSGHTGTVYRGTWNAKQGLLASCSEDGTVRTW 127
            C++TL+  +G VTSVD  M   YLL           DVRM RPL R+K H NTS +F+RAS  A   L+  GS+D  +Y+W R  +++LH L  H G V+   WN KQ LLAS   DG VRTW
Sbjct:  537 CIRTLNAQLGEVTSVD--MSDSYLLXXXXXXXXXXXDVRMLRPLRRFKAHSNTSHNFVRASF-AHSSLLVSGSEDGVLYMWDRESSEVLHTLEEHRGIVFGAVWNDKQSLLASHGSDGLVRTW 656          
BLAST of mRNA_E_fasciculatus_S2_contig8888.16990.1 vs. uniprot
Match: A0A7S0EW08_9EUKA (WD40 repeat-containing protein SMU1 (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EW08_9EUKA)

HSP 1 Score: 100 bits (249), Expect = 1.080e-24
Identity = 51/125 (40.80%), Postives = 63/125 (50.40%), Query Frame = 0
Query:    4 VCVKTLSQAVGAVTSVDLTMDGMYLLASSRHGPVRTWDVRMGRPLLRYKGHQNTSSSFLRASLGAEEGLVFGGSDDCKVYVWHRRETQLLHALSGHTGTVYRGTWNAKQGLLASCSEDGTVRTWW 128
            VC+++  Q +G VTSV L+  G  LL SSR   VR WDVR  RPL  + GHQNT  SF+RA  G  +GLV                             VY   W+ +  +LASCS DGT+ TWW
Sbjct:    2 VCLQSFGQPLGEVTSVQLSPSGTQLLTSSRDNAVRLWDVRSARPLRSFTGHQNTCKSFVRARFGPGKGLVVXXXXXXXXXXXXXXXXXXXXXXXXXADVVYDAAWSEETSMLASCSHDGTLATWW 126          
BLAST of mRNA_E_fasciculatus_S2_contig8888.16990.1 vs. uniprot
Match: A0A0M0JFB5_9EUKA (WD40 repeat-containing protein SMU1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JFB5_9EUKA)

HSP 1 Score: 105 bits (261), Expect = 1.160e-23
Identity = 54/126 (42.86%), Postives = 65/126 (51.59%), Query Frame = 0
Query:    2 SGVCVKTLSQAVGAVTSVDLTMDGMYLLASSRHGPVRTWDVRMGRPLLRYKGHQNTSSSFLRASLGAEEGLVFGGSDDCKVYVWHRRETQLLHALSGHTGTVYRGTWNAKQGLLASCSEDGTVRTW 127
            S +CV+ L  ++G VTSV L+                       RPL  YKGH NT  +F+RA  G     V  GS+D  V +W     +LLH L GHT  VY   WN   GLLASCS+DGTVRTW
Sbjct:  524 SALCVRKLRHSLGEVTSVQLSNCXXXXXXXXXXXXXXXXXXXAARPLRAYKGHLNTCKNFVRARFGPGRDSVMSGSEDGSVCLWSLASAELLHRLRGHTDVVYDAVWNPSLGLLASCSQDGTVRTW 649          
BLAST of mRNA_E_fasciculatus_S2_contig8888.16990.1 vs. uniprot
Match: A0A1S8W6W6_9FUNG (WD40 repeat-containing protein SMU1 n=2 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W6W6_9FUNG)

HSP 1 Score: 104 bits (260), Expect = 1.540e-23
Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 0
Query:   43 RMGRPLLRYKGHQNTSSSFLRASLGAEEGLVFGGSDDCKVYVWHRRETQLLHALSGHTGTVYRGTWNAKQGLLASCSEDGTVRTWW 128
            RM RP+ ++KGHQNTS +F+RAS  A E L+ GGS+D  VY+W R +  +L  L G+ G VY   WNAKQ LLASCSED T+ TWW
Sbjct:  536 RMLRPIRKFKGHQNTSKNFIRASF-AGESLIVGGSEDGAVYLWDRDKGDVLQRLRGNRGVVYSAVWNAKQALLASCSEDRTLSTWW 620          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8888.16990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G553_ECTSI5.710e-5698.90WD40 repeat-containing protein SMU1 n=1 Tax=Ectoca... [more]
A0A6G0WLP2_9STRA8.880e-3442.50WD40 repeat-containing protein SMU1 n=1 Tax=Aphano... [more]
A0A7S2SNF5_9STRA4.760e-2946.09WD40 repeat-containing protein SMU1 n=1 Tax=Rhizoc... [more]
A0A2X0MFG1_9BASI1.180e-2853.04WD40 repeat-containing protein SMU1 n=3 Tax=Microb... [more]
A0A835YTG5_9STRA3.030e-2861.45WD40 repeat-containing protein SMU1 n=1 Tax=Tribon... [more]
A0A1Y2G1L4_9BASI4.850e-2851.30WD40 repeat-containing protein SMU1 n=1 Tax=Leucos... [more]
A0A238FLD2_9BASI7.980e-2647.15WD40 repeat-containing protein SMU1 n=1 Tax=Microb... [more]
A0A7S0EW08_9EUKA1.080e-2440.80WD40 repeat-containing protein SMU1 (Fragment) n=1... [more]
A0A0M0JFB5_9EUKA1.160e-2342.86WD40 repeat-containing protein SMU1 n=1 Tax=Chryso... [more]
A0A1S8W6W6_9FUNG1.540e-2356.98WD40 repeat-containing protein SMU1 n=2 Tax=Batrac... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 44..86
e-value: 2.7
score: 14.2
coord: 2..41
e-value: 0.23
score: 20.5
coord: 89..128
e-value: 4.6E-5
score: 32.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 91..127
e-value: 9.7E-4
score: 19.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 9..50
score: 9.64
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 96..132
score: 11.879
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..132
e-value: 2.0E-25
score: 91.4
NoneNo IPR availablePANTHERPTHR22848WD40 REPEAT PROTEINcoord: 1..129
NoneNo IPR availablePANTHERPTHR22848:SF1coord: 1..129
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 9..132
score: 21.516
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8888contigE_fasciculatus_S2_contig8888:2829..5455 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8888.16990.1mRNA_E_fasciculatus_S2_contig8888.16990.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8888 1404..5626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8888.16990.1 ID=prot_E_fasciculatus_S2_contig8888.16990.1|Name=mRNA_E_fasciculatus_S2_contig8888.16990.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=133bp
MSGVCVKTLSQAVGAVTSVDLTMDGMYLLASSRHGPVRTWDVRMGRPLLR
YKGHQNTSSSFLRASLGAEEGLVFGGSDDCKVYVWHRRETQLLHALSGHT
GTVYRGTWNAKQGLLASCSEDGTVRTWWSSSS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat