prot_E_fasciculatus_S2_contig8853.16948.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8853.16948.1
Unique Nameprot_E_fasciculatus_S2_contig8853.16948.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length248
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8853.16948.1 vs. uniprot
Match: A0A2V0PLA3_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PLA3_9CHLO)

HSP 1 Score: 61.6 bits (148), Expect = 2.510e-7
Identity = 29/52 (55.77%), Postives = 33/52 (63.46%), Query Frame = 0 
Query:    5 TKVCKAIAELGRLDLLRCARRNGLPWDEGTCSAAARGGHYDVLTWAWVHSCP 56
            T  C A A  G+L+ L+CAR  G PWDEGTCSAAA+ GH  VL WA     P
Sbjct:  120 TLYCDAAAAGGQLEALQCARALGCPWDEGTCSAAAKFGHLAVLQWARAQDPP 171
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BLAST of mRNA_E_fasciculatus_S2_contig8853.16948.1 vs. uniprot
Match: A0A2V0NLW8_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NLW8_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 5.010e-7
Identity = 31/57 (54.39%), Postives = 36/57 (63.16%), Query Frame = 0 
Query:    1 LGRTTKVC-KAIAELGRLDLLRCARRNGLPWDEGTCSAAARGGHYDVLTWAWVHSCP 56
            LG  T +C +A A  G+L+ LRCAR  G PWD+GTCS AA GGH  VL WA     P
Sbjct:  115 LGDYTTLCSEAAAAGGQLEALRCARALGCPWDKGTCSFAADGGHLAVLQWARAQHPP 171
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8853.16948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V0PLA3_9CHLO2.510e-755.77Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A2V0NLW8_9CHLO5.010e-754.39Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 4..247
e-value: 6.1E-13
score: 50.0
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 5..226
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 79..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8853contigE_fasciculatus_S2_contig8853:334..1077 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8853.16948.1mRNA_E_fasciculatus_S2_contig8853.16948.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8853 334..1077 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8853.16948.1 ID=prot_E_fasciculatus_S2_contig8853.16948.1|Name=mRNA_E_fasciculatus_S2_contig8853.16948.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=248bp
LGRTTKVCKAIAELGRLDLLRCARRNGLPWDEGTCSAAARGGHYDVLTWA
WVHSCPFNEDTLCSDAARGGSLDALVWAIELDYPCNENTCCTDAARSGNL
EMVQWVRGEGCGWDEKTCAAAARSGDLETLQWVRSEGCAWDKRTCAKAAR
SGNLSMLKWVRENGCAWDEETCAKAARSGNLGVLQWVRSNGCAWGKRTCS
QAALSGNLEILHWARSKGCPWDEQTCFEASRSNPAVLEWARLNGCPEW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf