mRNA_E_fasciculatus_S2_contig8850.16945.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8850.16945.1
Unique NamemRNA_E_fasciculatus_S2_contig8850.16945.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8850.16945.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUE4_9PHAE)

HSP 1 Score: 500 bits (1287), Expect = 3.170e-171
Identity = 319/359 (88.86%), Postives = 329/359 (91.64%), Query Frame = 1 
Query:    4 ATPVTTAVTAATTTS-SRDGRDRRRQVPTCKLDRLPVRTLKRVVPLRPTPEKYLAYFGQTPLDRRRKMINFLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRPVVGSYNRALELWGAGSREARRKTKGALFTGRVTKTGFALSSQASNHRAHFQMLVEDESGRELLFDVPQVPEYRQIRKGMRCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKRVFWDLLHEKNARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------SDLENSSYRTGQQQRQRHPTRDVTPNSRGRSSSSSNGRDDGGRMMARSPRPRHYQ 1056
            ATPVT AVTA TT   S DGRD RRQVPTC+LDRLPVRTLKRVVPLRPTPEKYLA+FGQTPLDRRRKM+NFLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRPVVGSYNRALELWG+GSRE RRKTKGALFTGRVTKTGFALSSQASNHRAHFQMLVEDESGRELLFDVPQVPEYR+IRKGM CAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKRVFWDLLH+KNARK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       +DLENSSYRTGQQQ+QRHPTRDVT             RDDGGRM+ARSPRPR+YQ
Sbjct:   43 ATPVTPAVTATTTARRSHDGRDTRRQVPTCRLDRLPVRTLKRVVPLRPTPEKYLAHFGQTPLDRRRKMVNFLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRPVVGSYNRALELWGSGSREERRKTKGALFTGRVTKTGFALSSQASNHRAHFQMLVEDESGRELLFDVPQVPEYRRIRKGMSCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKRVFWDLLHDKNARKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGYANDLENSSYRTGQQQQQRHPTRDVTXXXXXXXXXX---RDDGGRMVARSPRPRNYQ 398
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8850.16945.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS48_ECTSI)

HSP 1 Score: 444 bits (1141), Expect = 1.060e-150
Identity = 225/236 (95.34%), Postives = 229/236 (97.03%), Query Frame = 1 
Query:    1 VATPVTTAVTAATTTSSRDGRDRRRQVPTCKLDRLPVRTLKRVVPLRPTPEKYLAYFGQTPLDRRRKMINFLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRPVVGSYNRALELWGAGSREARRKTKGALFTGRVTKTGFALSSQASNHRAHFQMLVEDESGRELLFDVPQVPEYRQIRKGMRCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKR 708
            VATPVT +VTA TT SS D RDRRRQVPTCKLDRLPVRTLKRVVPLRPTPEKYLA+FGQTPLDRRRKM+N LGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRPVVGSYNRALELWGAGSREARRKTKGALFTGRVTKTGFALSSQASNHRAHFQMLVEDESGRELLFDVPQVPEYR+IRKGM CAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKR
Sbjct:   42 VATPVTPSVTATTTRSSHDWRDRRRQVPTCKLDRLPVRTLKRVVPLRPTPEKYLAHFGQTPLDRRRKMVNVLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRPVVGSYNRALELWGAGSREARRKTKGALFTGRVTKTGFALSSQASNHRAHFQMLVEDESGRELLFDVPQVPEYRRIRKGMHCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKR 277
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8850.16945.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT15_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.920e-7
Identity = 53/196 (27.04%), Postives = 93/196 (47.45%), Query Frame = 1 
Query:  166 YFGQTPLDRRRKMINFLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRPVVGSYNRALELWGAGSREARRK-TKGALFTGRVTKTGFALSSQASNHRAHFQMLVEDESGRELLFDVPQVPEYRQIRKGMRCAVVVLSRS--SGFYELTGVTEAYLPELDLFVGRFPLLDKRVFWDLLHEKNAR 744
            Y+G+  + R  K+       F   WA +F +   + LG    + I      +       L P + +Y +  E  G  +   +   T+ ALF+  +      ++   +   A+ ++ V DE GR L+  VP V E  ++  GM   V+++S     GF ++ GV++AY+P +DL+VG +P L+K     LL+E+  R
Sbjct:   11 YWGEG-VQRAGKVAESFSVAFLGVWACYFTS---FFLGVAITSVIG-----VVFVFYWLLGPNLLNYRKNWEFRGKLAPSPKEPGTRAALFSASIANVVEEVNP-ITGKAANLRLEVADEEGRALMLRVPAVREAARVEAGMGIEVLLISDEPGGGFEDILGVSDAYIPAIDLWVGDYPHLNKLALRRLLNERYRR 196
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8850.16945.1 vs.
Match: Phosphate (ABC transporter permease n=1 Tax=Euhalothece natronophila Z-M001 TaxID=522448 RepID=A0A5B8NL37_9CHRO)

HSP 1 Score: 60.8 bits (146), Expect = 9.130e-7
Identity = 59/236 (25.00%), Postives = 99/236 (41.95%), Query Frame = 1 
Query:  121 KRVVPLRPTPEKYLAYFGQTPLDRRRKMINFLG------------------GLFAF----YWA---AFFATR--NVYVLGPGGINAIAWRGSCLAVFLQTFLRPVVGSYNRALELWGAGSREARRKTKGALFTGRVTKTGFALSSQASNHRAHFQMLVEDESGRELLFDVPQVPEYRQIRKGMRCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKRVFWDLLHEKNARK 747
            ++++PL  T  +Y  Y G  P   R+ +I+FLG                   LFAF    YW     ++ATR  + Y   P    A  WRG+ L  F+   L     + N   EL    +RE R                               + V D++G E+    P +  +R I+ G    ++ LS+      ++ VT+AY+P+LD++V  +P+L + +F ++  E + R+
Sbjct:   11 EQLIPLTGTAAQYRYYAGSWPDFLRKLLISFLGVVVIWLLGEITNSGGATVSLFAFIAGLYWLWSPVYWATRRNSSYRRFP---YAGFWRGNVLEAFVSEELLGTEETVNEYGELVIVENRERR-----------------------------INLQVGDKNGFEIQIQAPLLRLHRNIKPGQVVELLALSKDPDLERISKVTDAYIPQLDIWVSNYPVLRRDIFVEVSEELSGRR 214
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8850.16945.1 vs.
Match: Phosphate (ABC transporter permease n=1 Tax=Pleurocapsa sp. CCALA 161 TaxID=2107688 RepID=A0A2T1CCX8_9CYAN)

HSP 1 Score: 57.4 bits (137), Expect = 1.400e-5
Identity = 46/214 (21.50%), Postives = 97/214 (45.33%), Query Frame = 1 
Query:  121 KRVVPLRPTPEKYLAYFGQTPLDRRRKMINFLGGLFAFYWAAFFATR-NVYVLGPGGINAIAWRGSCLAVFLQTFLRPVVGSYNRALELWGAGSREARRKTKGALFTGRVTKTGFALSSQAS-----NHRAHFQMLVEDESGRELLFDVPQVPEYRQIRKGMRCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKRVFWDLLHEKNAR 744
            ++++PL  T ++Y  Y+G+      R +I+F+G +      A F  + +  +L  GGI A+ W      ++   +   +  S +R  +  G      R K      T  +      ++ +       N      +++ DE+G E+    P    ++ I+ G    ++VLS      ++  +++AYLP+ DL+VG++P + + VF ++  +   +
Sbjct:   11 EQLIPLIATGKQYAYYWGKWSDVLNRLLISFIGVVVVLILNALFGNQADALILLLGGIVALYW------LWCPVYQASLRNSASRRFKYSGFW----RGKVLDVYLTEELIGEEETVNQRGELVIVENRERWINLVLGDETGFEVEVQAPLQRIHKGIKPGQTAELLVLSNELDLSQINKISDAYLPQKDLWVGQYPYIQRDVFLEVSRQLGGK 214
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8850.16945.1 vs.
Match: Uncharacterized (protein n=2 Tax=Dactylococcopsis salina TaxID=292566 RepID=K9YTA2_DACSA)

HSP 1 Score: 55.8 bits (133), Expect = 4.050e-5
Identity = 56/236 (23.73%), Postives = 95/236 (40.25%), Query Frame = 1 
Query:  121 KRVVPLRPTPEKYLAYFGQTPLDRRRKMINFLG-------------------------GLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRPVVGSYNRALELWGAGSREARRKTKGALFTGRVTKTGFALSSQASNHRAHFQMLVEDESGRELLFDVPQVPEYRQIRKGMRCAVVVLSRSSGFYELTGVTEAYLPELDLFVGRFPLLDKRVFWDLLHE--KNARK 747
            ++++P   T E+Y  Y G+ P   R+ +I+F+G                         GL+  +   ++ATR          +   WRG  L VF+   L     + N   EL    +RE R                               + V D+SG E+    P    +R I+ G    ++VLS+      ++ +++AYLP+LDL+V  +P+L +  F ++  E  K AR+
Sbjct:   11 EQLIPFTATAEQYRYYAGEWPDFLRKLLISFVGVVVIWLLGEITRSGGATTSLFCAIAGLYWLWSPVYWATRRNSTYRRFPYSGF-WRGRVLEVFVSEELVGTEETVNEQGELVIVENRERR-----------------------------INLQVGDKSGFEIQIQAPLRRLHRNIKTGQVVELLVLSKDPDLARISKISDAYLPQLDLWVSNYPVLRRDTFIEVSLELRKPARR 216
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8850.16945.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
Uncharacterized3.170e-17188.86protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.060e-15095.34protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.920e-727.04protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Phosphate9.130e-725.00ABC transporter permease n=1 Tax=Euhalothece natro... [more]
Phosphate1.400e-521.50ABC transporter permease n=1 Tax=Pleurocapsa sp. C... [more]
Uncharacterized4.050e-523.73protein n=2 Tax=Dactylococcopsis salina TaxID=2925... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8850contigE_fasciculatus_S2_contig8850:2174..5645 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score68.6
Seed ortholog evalue5.6e-09
Seed eggNOG ortholog2880.D8LTW7
Model size1735
Hectar predicted targeting categorysignal peptide
Exons5
EggNOG OGs2E2W9@1,2SA2H@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_004830.1
Cds size858
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8850.16945.1prot_E_fasciculatus_S2_contig8850.16945.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8850 2850..5444 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842539.5949545-UTR-E_fasciculatus_S2_contig8850:2173..28491696842539.5949545-UTR-E_fasciculatus_S2_contig8850:2173..2849Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8850 2174..2849 -
1696842539.6697888-UTR-E_fasciculatus_S2_contig8850:5444..56451696842539.6697888-UTR-E_fasciculatus_S2_contig8850:5444..5645Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8850 5445..5645 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842539.6073103-CDS-E_fasciculatus_S2_contig8850:2849..32011696842539.6073103-CDS-E_fasciculatus_S2_contig8850:2849..3201Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8850 2850..3201 -
1696842539.619097-CDS-E_fasciculatus_S2_contig8850:3485..36371696842539.619097-CDS-E_fasciculatus_S2_contig8850:3485..3637Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8850 3486..3637 -
1696842539.6298332-CDS-E_fasciculatus_S2_contig8850:3970..40821696842539.6298332-CDS-E_fasciculatus_S2_contig8850:3970..4082Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8850 3971..4082 -
1696842539.6416185-CDS-E_fasciculatus_S2_contig8850:4779..49121696842539.6416185-CDS-E_fasciculatus_S2_contig8850:4779..4912Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8850 4780..4912 -
1696842539.6563332-CDS-E_fasciculatus_S2_contig8850:5335..54441696842539.6563332-CDS-E_fasciculatus_S2_contig8850:5335..5444Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8850 5336..5444 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8850.16945.1

>prot_E_fasciculatus_S2_contig8850.16945.1 ID=prot_E_fasciculatus_S2_contig8850.16945.1|Name=mRNA_E_fasciculatus_S2_contig8850.16945.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=286bp
MINFLGGLFAFYWAAFFATRNVYVLGPGGINAIAWRGSCLAVFLQTFLRP
VVGSYNRALELWGAGSREARRKTKGALFTGRVTKTGFALSSQASNHRAHF
QMLVEDESGRELLFDVPQVPEYRQIRKGMRCAVVVLSRSSGFYELTGVTE
AYLPELDLFVGRFPLLDKRVFWDLLHEKNARKRRGGGGTVTASRKQNRLS
SSGGGRQLSSSSSSSSGGRSRSGGDGGGSASDLENSSYRTGQQQRQRHPT
RDVTPNSRGRSSSSSNGRDDGGRMMARSPRPRHYQ*
back to top

mRNA from alignment at E_fasciculatus_S2_contig8850:2174..5645-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8850.16945.1 ID=mRNA_E_fasciculatus_S2_contig8850.16945.1|Name=mRNA_E_fasciculatus_S2_contig8850.16945.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3472bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8850:2174..5645- (Ectocarpus fasciculatus EfasUO2)
GTTGCAACGCCGGTTACCACTGCTGTAACAGCAGCAACCACCACGAGTAG
CCGCGACGGGAGAGACAGAAGGCGCCAAGTCCCTACCTGCAAGCTGGACA
GGCTGCCGGTGCGAACCCTCAAGCGCGTCGTGCCGTTGCGACCCACGCCG
GAGAAGTACCTCGCGTACTTCGGGCAGACGCCGCTCGACCGGAGGCGCAA
GATGATCAACTTCCTCGGCGGCCTGTTCGCCTTCTACTGGGCGGCGTTCT
TCGCGACTCGAAACGTCTACGTCCTCGGGCCGGGCGGCATCAACGCTATC
GCCTGGCGAGGTGCGAGAAGACAGGCTGGCTTTATACAACCTCGTGGGCA
CTTGCGCGCACGTAGTTAACGTCCGTTGTGGGACTCTCGGGAAGCAGGCA
TTCTGCAATTCCTCACAAGTTTTTGTACGGGTCTCTTCTCTCCCCACACA
CAAAGCTTGCGCATGTTTCGGCAGCAGCCGCCGCCGCCGCCGCAATTTGC
GGCGCTTGATGCGCAGTTCGTTCTCATGAGGTTGTTATTTTGCCGCCTCA
CTAAATCTGGCCGAGGCCCAAACCGCAACGTAGACGACATGTTGGGGGAG
GTTCACCGCCTTTGCCGACAAACCGCACTTGCCCCCTCCAACCGACTTAG
GACGGTTCACCGAAGCAGCAGGTAACCGTGTAGCCACGGCCACCTCGGTG
TCGTCGCTGCTGCTGCTGCTGCTGCTGCATCAGGTTCCTGCCTGGCGGTG
TTCCTGCAGACGTTCCTGAGACCTGTCGTGGGGTCGTACAACCGCGCGCT
TGAGCTGTGGGGAGCCGGGAGCCGGGAAGCGAGGAGAAAGACGAAGGGGG
CTCTGTTCACCGGAAGGTGGGTCTTTGTTCTTTGGAGGTGTCTACACTAC
ACCGATTGGGTACAATTCACGACCACGATCTGTGAGTATCCCATGCTAGA
GTCATGGAGTACAGCTGCTCCCCCGGGCAAACGGAGGGCAGGTGCACGGC
TACGGAAGCAACACGCGGTAGAGACACATCGCAAGCAAGAGTTGAAACTT
TCTAGGACAGCCTTGTTCCCCTCTGTGACGGACAGATGATTGGTCTCCCC
CATGCGCTGAGAAACACAGGACGTGTATGTCTAGGCTACGCCTACCATTT
ATTCCAAGAATTTGTCGGGATGGTGCCGTAGCCGGTGCCTGATGGCAGGC
TCCCAGTGCGTGTTTTCCAGTTTCCACGACTGGCATGAATCATAAATCGT
GCGTTCCCCCATGCTGAGATTCAAGTTCCAGCAAGTGGTTGTCGACATAG
CCCAGCGGTGGCACAGGCAATAAAACAGCGCTGCTTGGTCGTTGGATATC
CTGGTCTGCCTGTCACCATCTGCCCCCCTCGCAACCACCACCACCGCCGC
CGCCGCCGCCGCCGCCGCCGCCCGAACCTTACCCTACCTCGCCTCAACGC
AGAATGTAGCGCACCGTGTTTTGCTACCCGTTCCTTCCCACCGTTTCGTG
GAACGAAAGAGCCCTTTTGTGAAACGAAACCGCCTTCCGTGGAACGAAAC
CCACCCCGCACAGGGTGACCAAGACGGGGTTTGCGCTGTCGTCGCAGGCG
TCGAACCACAGGGCCCACTTCCAAATGCTGGTGGAGGACGAGAGCGGGAG
GGAGCTTTTGTTCGACGTCCCGCAGGCGAGGAAGTAGTTAAACAGCAATA
TCATGACCCCGTGATAGCGTTTCGCAAACCGTCTTGGATGTTCGGACAAA
ATGTTTTTTGGTGGTGGGGGAGCGGAGGCTAGCCCTGCATGTATAGACGA
AAAACATTTTTCTGGTGGTGGGGAGCGGAGGCTCATCGTCTCGGCTGGTG
GTCGTCATCCTATGCTGCGCTAAGTACCGAAGCAAAGACACCGCATGCTA
CCGGTACATATCCGCGTGCACGTTCCACAAGCAACGTAGACGGCATCATC
GTCTGTGTCTCTTCTCGTCCTCACATGTGCACACGTACGTTCGCTGTGCG
ACGTACAGGTGCCGGAGTACCGCCAAATCCGAAAGGGCATGCGCTGCGCG
GTGGTGGTCCTAAGCCGATCGTCCGGCTTCTACGAGCTGACCGGTGTGAC
GGAAGCGTACCTTCCTGAGCTTGATCTGTTCGTCGGACGGTTCCCGCTCC
TCGACAAGCGGTGAGATTTTCCTTCTTCTCAACCCGATTGTGGTCGCGCG
TGTTGCGCATCGCTTGGCTCTTTTATCCTTATCTTTGCCTCTTCCGACAT
GAGTTAAGTCACCGTAGAAGTTTTTTGAAAACAATTTCAAGTTGCGCCAA
CAGTTTGTGCGAATACGGGACGCTTTAATCGCCTCGGTATGTACGCAACA
CATCCTTATCCTTCCTCCCCCCACCCCCTCATCCCTTGGCCTCCCGCGAT
AAATGCATTCGCTGCTGACCCATCTTTCACGACGCCAACCGTAGCGTCTT
CTGGGACTTGCTGCACGAGAAGAATGCGCGAAAAAGGCGGGGGGGCGGGG
GTACGGTAACTGCTAGCCGAAAGCAAAACAGGTTGAGCAGCAGCGGCGGA
GGGCGGCAACTAAGCAGCAGTAGTAGCAGCAGCAGCGGGGGACGCAGTAG
AAGCGGCGGCGACGGCGGCGGCTCTGCAAGCGATCTCGAAAACAGCAGCT
ACCGCACCGGGCAACAGCAGCGACAGCGGCACCCTACGCGAGATGTGACG
CCGAACAGCCGCGGCCGCAGCAGCAGCAGCAGCAACGGTCGTGACGACGG
GGGCAGGATGATGGCCAGGAGCCCTAGGCCCAGGCACTACCAATGACGTT
CGTTCTCGCGAGAACCTGTAAGACCTACCAGCGTGAGTATAACGGAGAGC
AGCCTTCTATCAGCCGGGAATGCCGAGAGTGCCGTACCGTACCGTAGAGG
AGGACTATTCGAGAAGGAGACCGCCACAAGAGGACCGAAATACCTGCTCT
CCCGGGACGTTTGTGGCAGCGATACGGCATGGGCAGCACCGGGGGAGCAG
GAAGTGTTTCACCACCCAGGTCTGCGCGCTATTTAGTTGAGCTGCGCAGC
ACCGGGAGCGCGAGGAGAGTGAAAGCTTGGTTTTTATTGGCGGAAATAAT
GTGTTTGTCTGGCCGCCGCCGCCGCCGCCGCCGCCGCATCGCCGCATCCA
AGAGAAGGAGGAGCAGCGGCCGGGATTCGAGATGATGTGTTTGTCGCCGC
CGCCGCCGCCGCCGCACCGCCGTTTCCAAGAGGAGGAGGAGCAGCGGCCG
GGAATCGAGTTCGAACTAACGAACGGAGAGCGCCTCTACGTGAGAACCTG
GAAGTCAAAAGATCTTCGTGCTTATTAACACGAAATTTACTCGAAGAACC
CCACCGCCCCAAACGAAGAGCTGCGCTTTCGCTGCTGGATCACCACCACA
GAGAAAGCAAGAACACGCCTTGTTGAGCAAATTCGAGGGTCTTGCACGTG
GTGGCGCAGTGGCGGTCAACCG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8850:2174..5645-

>mRNA_E_fasciculatus_S2_contig8850.16945.1 ID=mRNA_E_fasciculatus_S2_contig8850.16945.1|Name=mRNA_E_fasciculatus_S2_contig8850.16945.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=858bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8850:2174..5645- (Ectocarpus fasciculatus EfasUO2)
ATGATCAACTTCCTCGGCGGCCTGTTCGCCTTCTACTGGGCGGCGTTCTT
CGCGACTCGAAACGTCTACGTCCTCGGGCCGGGCGGCATCAACGCTATCG
CCTGGCGAGGTTCCTGCCTGGCGGTGTTCCTGCAGACGTTCCTGAGACCT
GTCGTGGGGTCGTACAACCGCGCGCTTGAGCTGTGGGGAGCCGGGAGCCG
GGAAGCGAGGAGAAAGACGAAGGGGGCTCTGTTCACCGGAAGGGTGACCA
AGACGGGGTTTGCGCTGTCGTCGCAGGCGTCGAACCACAGGGCCCACTTC
CAAATGCTGGTGGAGGACGAGAGCGGGAGGGAGCTTTTGTTCGACGTCCC
GCAGGTGCCGGAGTACCGCCAAATCCGAAAGGGCATGCGCTGCGCGGTGG
TGGTCCTAAGCCGATCGTCCGGCTTCTACGAGCTGACCGGTGTGACGGAA
GCGTACCTTCCTGAGCTTGATCTGTTCGTCGGACGGTTCCCGCTCCTCGA
CAAGCGCGTCTTCTGGGACTTGCTGCACGAGAAGAATGCGCGAAAAAGGC
GGGGGGGCGGGGGTACGGTAACTGCTAGCCGAAAGCAAAACAGGTTGAGC
AGCAGCGGCGGAGGGCGGCAACTAAGCAGCAGTAGTAGCAGCAGCAGCGG
GGGACGCAGTAGAAGCGGCGGCGACGGCGGCGGCTCTGCAAGCGATCTCG
AAAACAGCAGCTACCGCACCGGGCAACAGCAGCGACAGCGGCACCCTACG
CGAGATGTGACGCCGAACAGCCGCGGCCGCAGCAGCAGCAGCAGCAACGG
TCGTGACGACGGGGGCAGGATGATGGCCAGGAGCCCTAGGCCCAGGCACT
ACCAATGA
back to top